BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00007610
         (747 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   202   1e-49
emb|CBI35666.3| unnamed protein product [Vitis vinifera]              202   1e-49
gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea]       201   2e-49
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]   200   4e-49
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...   197   3e-48
gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus...   196   9e-48
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...   194   2e-47
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...   194   3e-47
ref|XP_002873605.1| pentatricopeptide repeat-containing protein ...   191   2e-46
ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutr...   191   3e-46
ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Caps...   189   8e-46
gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protei...   187   2e-45
ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containi...   184   2e-44
ref|NP_196831.1| protein required for accD RNA editing 1 [Arabid...   183   5e-44
ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Popu...   181   2e-43
ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [A...   153   7e-35
ref|XP_002299342.1| predicted protein [Populus trichocarpa]           151   2e-34
gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygr...   105   2e-20
ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containi...   104   3e-20
ref|XP_006434326.1| hypothetical protein CICLE_v10000445mg [Citr...   104   4e-20

>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  202 bits (514), Expect = 1e-49
 Identities = 95/220 (43%), Positives = 148/220 (67%)
 Frame = +2

Query: 80  TANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDSEGV 259
           +AN+ +IPS +SLK + + ++   ++QQGK+ENLHL+SL++QGKL E H FL+EMD   V
Sbjct: 25  SANFAQIPSWVSLKRSSSTIKTE-KIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADV 83

Query: 260 LVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAAES 439
            V+P +YQ L + CG+L+SL  GRLIHDR+R   + P G ++NC+L+MYC+CGS +  + 
Sbjct: 84  SVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQK 143

Query: 440 LFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXXXX 619
           +FD+M  +N  SW I++SA+A  G  +K   +F  M+  GI  + ++Y+S          
Sbjct: 144 VFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSF 203

Query: 620 XXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
              GKQIHS VI++  + N+ ++TA+ NMY++C  L+ A+
Sbjct: 204 LELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 43/180 (23%), Positives = 80/180 (44%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPG 376
           A+ G+L++  R   +M + G+  +   Y  LLQ+C     L  G+ IH  +         
Sbjct: 164 AKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANI 223

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            ++  +  MY  CG +  A+ +FD M  +N  +W  +M  +      +    +F +M   
Sbjct: 224 TVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAME 283

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           G+     ++               G+QIHS ++K G    V++ T + + Y+KC  ++SA
Sbjct: 284 GVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESA 343



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 45/187 (24%), Positives = 76/187 (40%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           ++   +  KL+        M  EGV +    +  +L+ C  L+    GR IH  I     
Sbjct: 261 MVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGA 320

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
                +   ++  Y +CG + +A   F ++ E N  SW+ ++S F+  G  +    +F  
Sbjct: 321 ESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTS 380

Query: 545 MKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDC 724
           ++  G+  +  IY S             G Q H   IK G    +  ++A+  MY KC  
Sbjct: 381 LRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGR 440

Query: 725 LQSAEWA 745
           L  A  A
Sbjct: 441 LDYARRA 447


>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  202 bits (514), Expect = 1e-49
 Identities = 95/220 (43%), Positives = 148/220 (67%)
 Frame = +2

Query: 80  TANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDSEGV 259
           +AN+ +IPS +SLK + + ++   ++QQGK+ENLHL+SL++QGKL E H FL+EMD   V
Sbjct: 25  SANFAQIPSWVSLKRSSSTIKTE-KIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADV 83

Query: 260 LVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAAES 439
            V+P +YQ L + CG+L+SL  GRLIHDR+R   + P G ++NC+L+MYC+CGS +  + 
Sbjct: 84  SVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQK 143

Query: 440 LFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXXXX 619
           +FD+M  +N  SW I++SA+A  G  +K   +F  M+  GI  + ++Y+S          
Sbjct: 144 VFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSF 203

Query: 620 XXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
              GKQIHS VI++  + N+ ++TA+ NMY++C  L+ A+
Sbjct: 204 LELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 43/180 (23%), Positives = 80/180 (44%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPG 376
           A+ G+L++  R   +M + G+  +   Y  LLQ+C     L  G+ IH  +         
Sbjct: 164 AKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANI 223

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            ++  +  MY  CG +  A+ +FD M  +N  +W  +M  +      +    +F +M   
Sbjct: 224 TVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAME 283

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           G+     ++               G+QIHS ++K G    V++ T + + Y+KC  ++SA
Sbjct: 284 GVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESA 343



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 45/187 (24%), Positives = 76/187 (40%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           ++   +  KL+        M  EGV +    +  +L+ C  L+    GR IH  I     
Sbjct: 261 MVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGA 320

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
                +   ++  Y +CG + +A   F ++ E N  SW+ ++S F+  G  +    +F  
Sbjct: 321 ESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTS 380

Query: 545 MKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDC 724
           ++  G+  +  IY S             G Q H   IK G    +  ++A+  MY KC  
Sbjct: 381 LRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGR 440

Query: 725 LQSAEWA 745
           L  A  A
Sbjct: 441 LDYARRA 447


>gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea]
          Length = 1003

 Score =  201 bits (512), Expect = 2e-49
 Identities = 109/230 (47%), Positives = 151/230 (65%), Gaps = 2/230 (0%)
 Frame = +2

Query: 56  SLPGNNILTANYTRIPSSLSLKSNIAPLQN-SPRLQQGKIENLHLISLAEQGKLDEVHRF 232
           SLP +    ANY RIPS +SLKS+   L+  S R  QG++EN+HL+SL++ GKL+E H F
Sbjct: 14  SLPHST--AANYARIPSWVSLKSSNFSLETPSTRHHQGELENVHLVSLSKHGKLEEAHEF 71

Query: 233 LEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCE 412
           + EMD   V VSPQ+Y+HLL+ C +L+SLH G+LIH R+      PP FL N V++MYC+
Sbjct: 72  VLEMDRSNVPVSPQSYKHLLEACSRLKSLHFGKLIHRRLN---DPPPRFLVNYVVQMYCD 128

Query: 413 CGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL-GINASPSIYIS 589
           CGS+  A  +FD+M ER  GS   ++SA+AD+G T +   +FL++K+   +   P+ Y+S
Sbjct: 129 CGSLSDARKVFDEMRERALGSGITLISAYADKGLTKEALEIFLQVKDSDNVVVIPTTYLS 188

Query: 590 XXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
                        GKQIH  VIK+GF  NVA+DTA+ NMY KC  ++SAE
Sbjct: 189 VLKSFVDSSYLEVGKQIHCHVIKAGFTSNVAIDTAICNMYAKCRNMESAE 238



 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
 Frame = +2

Query: 230 FLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYC 409
           FL+  DS+ V+V P TY  +L++      L  G+ IH  +     T    +   +  MY 
Sbjct: 170 FLQVKDSDNVVVIPTTYLSVLKSFVDSSYLEVGKQIHCHVIKAGFTSNVAIDTAICNMYA 229

Query: 410 ECGSMLAAESLFDKMPERNPGSWAIIMSAFA-DEGWTDKVFGVFLKMKELGINASPSIYI 586
           +C +M +AE  F +M E+N  SW  +M  +   +   D +  +   M+E        ++ 
Sbjct: 230 KCRNMESAEMNFRRMLEKNTVSWTTMMVGYTLADRHVDTLKYLIEMMEERHSEVDEFVFS 289

Query: 587 SXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
                         G+QIH  ++K G   +V++ T + + Y+KC  ++SA
Sbjct: 290 ITLKACVALGDHSMGEQIHGMILKHGMETDVSVGTPLVDFYVKCGSMESA 339


>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  200 bits (509), Expect = 4e-49
 Identities = 94/220 (42%), Positives = 147/220 (66%)
 Frame = +2

Query: 80  TANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDSEGV 259
           +AN+ +IPS +SLK + + +    ++QQGK+ENLHL+SL++QGKL E H FL+EMD   V
Sbjct: 25  SANFAQIPSWVSLKRSSSTIXTE-KIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADV 83

Query: 260 LVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAAES 439
            V+P +YQ L + CG+L+SL  GRLIHDR+R   + P G ++NC+L+MYC+CGS +  + 
Sbjct: 84  SVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQK 143

Query: 440 LFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXXXX 619
           +FD+M  +N  SW I++SA+A  G  +K   +F  M+  GI  + ++Y+S          
Sbjct: 144 VFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSF 203

Query: 620 XXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
              GKQ+HS VI++  + N+ ++TA+ NMY++C  L+ A+
Sbjct: 204 LELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 44/180 (24%), Positives = 81/180 (45%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPG 376
           A+ G+L++  R   +M + G+  +   Y  LLQ+C     L  G+ +H  +         
Sbjct: 164 AKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANI 223

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            ++  +  MY  CG +  A+ +FD M  +N  +W  +M  +      +    +F +M   
Sbjct: 224 TVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAME 283

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           G+     ++               GKQIHS ++K G    V++ T + + Y+KC  ++SA
Sbjct: 284 GVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESA 343



 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 44/187 (23%), Positives = 76/187 (40%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           ++   +  KL+        M  EGV +    +  +L+ C  L+    G+ IH  I     
Sbjct: 261 MVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGX 320

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
                +   ++  Y +CG + +A   F ++ E N  SW+ ++S F+  G  +    +F  
Sbjct: 321 ESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTS 380

Query: 545 MKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDC 724
           ++  G+  +  IY S             G Q H   IK G    +  ++A+  MY KC  
Sbjct: 381 LRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGR 440

Query: 725 LQSAEWA 745
           L  A  A
Sbjct: 441 LDYARRA 447


>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  197 bits (501), Expect = 3e-48
 Identities = 97/226 (42%), Positives = 149/226 (65%)
 Frame = +2

Query: 68  NNILTANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMD 247
           N+   AN+ +IPS +SLKS+ + L+     QQG++ENLHLISLA+QG L EVH F+  MD
Sbjct: 26  NDARHANFAQIPSWVSLKSSHSSLRTHQN-QQGQVENLHLISLAKQGNLREVHEFIRNMD 84

Query: 248 SEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSML 427
             G+ ++P++Y++L + CG L +L  G+L H+R++ +      F+ NC+LKMYC+C S  
Sbjct: 85  KVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQ-RMANSNKFIDNCILKMYCDCKSFT 143

Query: 428 AAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXX 607
           +AE  FDK+ +++  SW+ I+SA+ +EG  D+   +FL+M +LGI  + SI+ +      
Sbjct: 144 SAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFT 203

Query: 608 XXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAEWA 745
                  GKQIHSQ+I+ GF  N++++T +SNMY+KC  L  AE A
Sbjct: 204 DPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVA 249



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 42/169 (24%), Positives = 74/169 (43%)
 Frame = +2

Query: 239 EMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECG 418
           +M SEGV +    +  +L+ C  L  L+ G+ IH             +   ++  Y +C 
Sbjct: 283 KMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCA 342

Query: 419 SMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXX 598
              AA   F+ + E N  SW+ +++ +   G  D+   VF  ++  G+  +  IY +   
Sbjct: 343 RFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQ 402

Query: 599 XXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAEWA 745
                     G QIH+  IK G    ++ ++A+ +MY KC  +  A  A
Sbjct: 403 ACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQA 451



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
 Frame = +2

Query: 200 EQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDR-IRTKFQTPPG 376
           E+G++DE  R    M   G+  +   +  L+ +      L  G+ IH + IR  F     
Sbjct: 169 EEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANIS 228

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            ++  +  MY +CG +  AE   +KM  +N  +   +M  +           +F KM   
Sbjct: 229 -IETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISE 287

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           G+     ++               GKQIHS  IK G    V++ T + + Y+KC   ++A
Sbjct: 288 GVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAA 347

Query: 737 EWA 745
             A
Sbjct: 348 RQA 350


>gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus vulgaris]
          Length = 765

 Score =  196 bits (497), Expect = 9e-48
 Identities = 98/224 (43%), Positives = 148/224 (66%)
 Frame = +2

Query: 68  NNILTANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMD 247
           NN+  AN+ +IPS +SLKS+ A L+ +P  +QG++ENLHLISL +QGK+ EVH F+E MD
Sbjct: 26  NNVRHANFAQIPSRISLKSSHASLRTNPN-KQGEVENLHLISLTKQGKVREVHEFIERMD 84

Query: 248 SEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSML 427
            EG+ ++ Q+Y++L + CG+L++L  GRL H R++ +      F+ NC+L+M+C+C S  
Sbjct: 85  REGISINLQSYEYLFKMCGRLRALPDGRLFHSRLQ-RISNSNRFIDNCILQMHCDCKSFA 143

Query: 428 AAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXX 607
           AAE  FDKM +R+  SWA I+SA+  EG T +   + L M +LGI  + SI+ +      
Sbjct: 144 AAERFFDKMVDRDLFSWATIISAYTKEGHTYEAVRLLLHMLDLGIKPNFSIFSTLIMSFA 203

Query: 608 XXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
                  GKQIHS +I+ G   +++++T +SNMY+KC  L  AE
Sbjct: 204 DPSMLDLGKQIHSHLIRIGSAADISIETLISNMYVKCRWLDGAE 247



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 42/169 (24%), Positives = 70/169 (41%)
 Frame = +2

Query: 239 EMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECG 418
           +M SEG  +    +  +L+ C  L  L+ GR IH             +   ++  Y +C 
Sbjct: 283 KMISEGAELDEFVFSIVLKACAALGDLYTGRKIHSYCIKLGLESEVSVGTPLVDFYVKCA 342

Query: 419 SMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXX 598
              AA   F+ + E N  SW+ ++  +   G  D    VF  ++  G+  +  IY +   
Sbjct: 343 RFDAARRAFETICEPNDYSWSALIVGYCQSGRFDTALEVFKTLRSKGVLLNSFIYTNMFQ 402

Query: 599 XXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAEWA 745
                     G QIH+  IK G    ++ ++A+  MY KC  +  A  A
Sbjct: 403 ACSGLSDLICGSQIHADAIKKGLVSFLSGESAMITMYSKCGKVDYAHQA 451


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score =  194 bits (494), Expect = 2e-47
 Identities = 98/222 (44%), Positives = 142/222 (63%)
 Frame = +2

Query: 74  ILTANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDSE 253
           I +AN+ ++PS +SLK    PL  + + ++G++EN+HL+SL++QGKL E   FL++M   
Sbjct: 26  IKSANFAQLPSWVSLKGT-PPLHQAQQNRKGQVENVHLVSLSKQGKLKEAREFLKQMVDA 84

Query: 254 GVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAA 433
           G+ VSP +Y++L + CG  +SL  G++IH+ +R   + P  FL+N VLKMYC C S+  A
Sbjct: 85  GISVSPDSYRNLFEICGNSKSLSDGKIIHELLRRTVEKPSVFLENTVLKMYCVCESLEDA 144

Query: 434 ESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXX 613
             +FDKM ERN  SW  I+SA+A+ G  DK   +F+ M  LGIN + SIYI         
Sbjct: 145 YKVFDKMIERNLISWGTIISAYAEHGLLDKALSLFISMISLGINPNSSIYIDLLRSLLNP 204

Query: 614 XXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
                GKQIHS  I+SG    V+++TA+SNMY++C  L  AE
Sbjct: 205 SLLGIGKQIHSHSIRSGLGAGVSINTAISNMYVRCGWLDGAE 246



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 43/180 (23%), Positives = 69/180 (38%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPG 376
           AE G LD+       M S G+  +   Y  LL++      L  G+ IH            
Sbjct: 167 AEHGLLDKALSLFISMISLGINPNSSIYIDLLRSLLNPSLLGIGKQIHSHSIRSGLGAGV 226

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            +   +  MY  CG +  AE   + M E+N  +W  +M  +   G       +F KM   
Sbjct: 227 SINTAISNMYVRCGWLDGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNALDLFAKMVCE 286

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
            +     ++               G+QIH  ++K G    V++ T + + YIKC   + A
Sbjct: 287 DVELDEYVFSISLKACAGLKELSFGRQIHGHIVKLGLESEVSVGTPLVDFYIKCASFELA 346



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 40/187 (21%), Positives = 73/187 (39%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           ++   + GK         +M  E V +    +   L+ C  L+ L  GR IH  I     
Sbjct: 264 MVGYTQAGKQKNALDLFAKMVCEDVELDEYVFSISLKACAGLKELSFGRQIHGHIVKLGL 323

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
                +   ++  Y +C S   A  +F+ + E N  SW+ +++ +   G  ++   +F  
Sbjct: 324 ESEVSVGTPLVDFYIKCASFELASKVFEGISEPNDVSWSAMITGYCQIGEFEEALKIFES 383

Query: 545 MKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDC 724
           ++    N +   Y S             G Q+H+  IK     +   ++A+  MY +C  
Sbjct: 384 LRSNIENLNSFTYTSIFQACSALADFSTGTQVHADAIKRSLIASQHGESAMITMYSRCGR 443

Query: 725 LQSAEWA 745
           L  A  A
Sbjct: 444 LDYANLA 450


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  194 bits (493), Expect = 3e-47
 Identities = 98/229 (42%), Positives = 149/229 (65%)
 Frame = +2

Query: 59  LPGNNILTANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLE 238
           L  N+   AN+ +IPS +SLKS  +  +     QQG++ENLHLISLA+QGKL +VH F+ 
Sbjct: 11  LLSNDARHANFAQIPSWVSLKSTHSSFRTHQN-QQGQVENLHLISLAKQGKLRQVHEFIR 69

Query: 239 EMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECG 418
            MD  G+ ++P++Y++L + CG L +L  G+L H+R++ +      F+ NC+L+MYC+C 
Sbjct: 70  NMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQ-RMANSNKFIDNCILQMYCDCK 128

Query: 419 SMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXX 598
           S  AAE  FDK+ +R+  SWA I+SA+ +EG  D+  G+FL+M +LGI  + SI+ +   
Sbjct: 129 SFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIM 188

Query: 599 XXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAEWA 745
                     GKQIHSQ+I+  F  +++++T +SNMY+KC  L  AE A
Sbjct: 189 SFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVA 237



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 42/169 (24%), Positives = 73/169 (43%)
 Frame = +2

Query: 239 EMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECG 418
           +M SEGV +    +  +L+ C  L  L+ G+ IH             +   ++  Y +C 
Sbjct: 271 KMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCA 330

Query: 419 SMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXX 598
              AA   F+ + E N  SW+ +++ +   G  D+   VF  ++  G+  +  IY +   
Sbjct: 331 RFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQ 390

Query: 599 XXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAEWA 745
                     G QIH+  IK G    ++ ++A+  MY KC  +  A  A
Sbjct: 391 ACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQA 439



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 1/183 (0%)
 Frame = +2

Query: 200 EQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDR-IRTKFQTPPG 376
           E+G++DE       M   G++ +   +  L+ +      L  G+ IH + IR +F     
Sbjct: 157 EEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADIS 216

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            ++  +  MY +CG +  AE   +KM  ++  +   +M  +           +F KM   
Sbjct: 217 -IETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISE 275

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           G+     ++               GKQIHS  IK G    V++ T + + Y+KC   ++A
Sbjct: 276 GVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAA 335

Query: 737 EWA 745
             A
Sbjct: 336 RQA 338


>ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319442|gb|EFH49864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 750

 Score =  191 bits (486), Expect = 2e-46
 Identities = 97/222 (43%), Positives = 144/222 (64%)
 Frame = +2

Query: 74  ILTANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDSE 253
           I TAN+ +IPS +SLKS+ + ++ S +  QG++ENLHL+SL++ GKL+E   F +EMD  
Sbjct: 18  IKTANFNQIPSWVSLKSSTSSVKISHK--QGQVENLHLVSLSKHGKLNEAFEFFQEMDKA 75

Query: 254 GVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAA 433
           GV VS  +YQ L + C +L+SL HGRL+H+R+R   + P   LQNCVL+MYCECGS+  A
Sbjct: 76  GVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDA 135

Query: 434 ESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXX 613
           + LFD+M + N  S   ++SA+A++G  DK  G+F +M E G     S+Y +        
Sbjct: 136 DKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNP 195

Query: 614 XXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
                G+QIH+ VI++G   N +++T + NMY+KC  L  A+
Sbjct: 196 RALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAK 237



 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 46/180 (25%), Positives = 78/180 (43%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPG 376
           AEQG LD+       M   G       Y  LL++    ++L  GR IH  +         
Sbjct: 158 AEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNA 217

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            ++  ++ MY +CG ++ A+ +FD+M  + P +W  +M  +   G       +F+ +   
Sbjct: 218 SIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITE 277

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           G+     ++               GKQIH+ V K G    V++ T + + YIKC   +SA
Sbjct: 278 GVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESA 337



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 1/185 (0%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           ++   + G+  +  +   ++ +EGV      +  +L+ C  L+ L  G+ IH  +     
Sbjct: 255 MVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGL 314

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
                +   ++  Y +C S  +A   F ++ E N  SW+ I+S +      ++    F  
Sbjct: 315 ECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 374

Query: 545 MKELGINASPSI-YISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCD 721
           ++        S  Y S             G Q+H+  IK    G+   ++A+  MY KC 
Sbjct: 375 LRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 434

Query: 722 CLQSA 736
           CL  A
Sbjct: 435 CLDDA 439


>ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutrema salsugineum]
           gi|557100908|gb|ESQ41271.1| hypothetical protein
           EUTSA_v10012768mg [Eutrema salsugineum]
          Length = 750

 Score =  191 bits (484), Expect = 3e-46
 Identities = 94/219 (42%), Positives = 141/219 (64%)
 Frame = +2

Query: 83  ANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDSEGVL 262
           AN+ RIPS +SLKS+ + ++   +  QG++ENLHL+SL++ GKL+E   F +EMD  GV 
Sbjct: 21  ANFDRIPSWVSLKSSTSSVKIEHK--QGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVS 78

Query: 263 VSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAAESL 442
           +SP +YQ L + C + +SL HGRL+H R+RT F+ P   LQNCVL+MYC CGS+  A+ L
Sbjct: 79  ISPYSYQCLFEACRESRSLSHGRLLHHRMRTAFENPSVLLQNCVLQMYCGCGSLEDADKL 138

Query: 443 FDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXXXXX 622
           FD+MPE N  S   ++SA+A++G  +K  G+F  M E G + + S+Y +           
Sbjct: 139 FDEMPELNTVSRVTMISAYAEQGLLEKAVGLFSGMLESGDSPTSSVYTTLLKSLVNPSAL 198

Query: 623 XXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
             G+Q+H  VI++G   N +++  + NMY+KC  L  A+
Sbjct: 199 DIGRQVHGHVIRAGLCSNPSIEAGILNMYVKCGWLVGAK 237



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDR-IRTKFQTPP 373
           AEQG L++       M   G   +   Y  LL++     +L  GR +H   IR    + P
Sbjct: 158 AEQGLLEKAVGLFSGMLESGDSPTSSVYTTLLKSLVNPSALDIGRQVHGHVIRAGLCSNP 217

Query: 374 GFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKE 553
             ++  +L MY +CG ++ A+ +FD+M  +   +W  +M  +   G +     +F     
Sbjct: 218 S-IEAGILNMYVKCGWLVGAKLVFDQMAVKKSVAWTGLMIGYTQAGRSRDALKLFADFVS 276

Query: 554 LGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQS 733
            G N    ++               GKQIH+ V K G    V++ T + + YIKC   +S
Sbjct: 277 EGGNWDNFVFSVVLKSCASLEEINLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFES 336

Query: 734 A 736
           A
Sbjct: 337 A 337



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 1/185 (0%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           +I   + G+  +  +   +  SEG       +  +L++C  L+ ++ G+ IH  +     
Sbjct: 255 MIGYTQAGRSRDALKLFADFVSEGGNWDNFVFSVVLKSCASLEEINLGKQIHACVAKLGL 314

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
                +   ++  Y +C S  +A   F+K+ E N  +W+ I+S +      ++    F  
Sbjct: 315 ESEVSVGTPLVDFYIKCSSFESACRAFEKICEPNDVTWSAIISGYCQMSQFEEAIKTFKS 374

Query: 545 MKELGINASPSI-YISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCD 721
           ++        S  Y S             G Q+H+  IK    G+   ++A+  MY KC 
Sbjct: 375 LRSKNAAVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 434

Query: 722 CLQSA 736
           CL  A
Sbjct: 435 CLDDA 439


>ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Capsella rubella]
           gi|482558719|gb|EOA22911.1| hypothetical protein
           CARUB_v10003644mg [Capsella rubella]
          Length = 752

 Score =  189 bits (480), Expect = 8e-46
 Identities = 94/219 (42%), Positives = 137/219 (62%)
 Frame = +2

Query: 83  ANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDSEGVL 262
           +N+ +IPS +SLKS+ +        +QG++ENLHL+SL++ GKL+E   F +EMD  GV 
Sbjct: 21  SNFDQIPSWVSLKSSTSSSSLKIEHKQGQVENLHLVSLSKHGKLNEAFAFFQEMDKAGVS 80

Query: 263 VSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAAESL 442
           VSP +YQ L + C  L+SL HGRL+HDR+R  F+ P   LQNCVL+MYCECGS+  A+ L
Sbjct: 81  VSPYSYQCLFEACRNLRSLSHGRLLHDRMRMAFENPSLLLQNCVLQMYCECGSLEDADKL 140

Query: 443 FDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXXXXX 622
           FD+MP+ N  S   ++SA+A+ G  DK  G+F  M   G     S+Y +           
Sbjct: 141 FDEMPDLNAVSRVTMVSAYAERGLLDKAVGLFSGMLASGDEPPSSMYTTLLKSLINPEAL 200

Query: 623 XXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
             G+QIH+ V+++G   N +++  + NMY+KC  L  A+
Sbjct: 201 DVGRQIHAHVMRAGLCNNTSIEIGILNMYVKCGWLVGAK 239



 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 46/180 (25%), Positives = 81/180 (45%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPG 376
           AE+G LD+       M + G       Y  LL++    ++L  GR IH  +         
Sbjct: 160 AERGLLDKAVGLFSGMLASGDEPPSSMYTTLLKSLINPEALDVGRQIHAHVMRAGLCNNT 219

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            ++  +L MY +CG ++ A+ +FD+M ++ P +W  +M  +   G       +F+++   
Sbjct: 220 SIEIGILNMYVKCGWLVGAKRVFDQMAQKKPVAWTGLMVGYTQAGRARDALKLFVELVIE 279

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           G+     ++               GKQIH+ V K G    V++ T + + YIKC   +SA
Sbjct: 280 GVEWDSFVFSVVLKACASLEELKLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESA 339



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 40/185 (21%), Positives = 74/185 (40%), Gaps = 1/185 (0%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           ++   + G+  +  +   E+  EGV      +  +L+ C  L+ L  G+ IH  +     
Sbjct: 257 MVGYTQAGRARDALKLFVELVIEGVEWDSFVFSVVLKACASLEELKLGKQIHACVAKLGL 316

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
                +   ++  Y +C S  +A   F ++ E N  +W+ I+S +      ++    F  
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACCAFQEISEPNDVTWSAIISGYCQMSQFEEAVKTFKS 376

Query: 545 MKELGINASPSI-YISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCD 721
           ++        S  Y S             G Q+H+  IK    G+   ++A+  MY KC 
Sbjct: 377 LRSKNAAVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 436

Query: 722 CLQSA 736
           CL  A
Sbjct: 437 CLDDA 441


>gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 762

 Score =  187 bits (476), Expect = 2e-45
 Identities = 95/223 (42%), Positives = 146/223 (65%)
 Frame = +2

Query: 71  NILTANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDS 250
           +I  A++ + PS +SLKS  + L+  P  QQG++EN+HL+SL++Q KL E   FL++M+ 
Sbjct: 23  SIKPASFAQFPSWVSLKSTSSSLK-IPLSQQGQVENVHLVSLSKQRKLKEARDFLKQMEE 81

Query: 251 EGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLA 430
            GV V+P +Y+ LL+TC +++SL  G+LIH+ +R   + P GFL+N +L+MY +C S L 
Sbjct: 82  AGVPVNPHSYKSLLETCSKVRSLSDGKLIHNHLRRTMKNPSGFLENSLLQMYLDCESFLH 141

Query: 431 AESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXX 610
           AE LFDKM E+   SW I++SA++ +G   K F ++ +M ELGI  + +I+         
Sbjct: 142 AEKLFDKMIEKTLASWIILISAYSQKGHLKKTFSLYSQMVELGIRPNSTIFTRLLKSLFD 201

Query: 611 XXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
                 GKQIHS +I++G   NV++ TA+SNMY KC  L+ A+
Sbjct: 202 PSVLEIGKQIHSLLIRTGLSTNVSVITAISNMYAKCGWLEGAK 244



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 43/187 (22%), Positives = 81/187 (43%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           ++   +  K  +      +M  EGV +    +  +L+ C  L+ L+ GR IH  +     
Sbjct: 262 MMGCTQADKQKDALELFGKMVKEGVKLDGFVFSVVLKACAGLEDLNLGRQIHGYVVKLGF 321

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
               F+   V+ +Y +C    +A   F+++ E N  SW+ I++ +   G  +K   +F  
Sbjct: 322 ESDVFVGTPVVDLYVKCAWFESACRAFERISEPNDVSWSAIVTGYCQVGKFEKSLKIFKS 381

Query: 545 MKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDC 724
           ++   ++ +  +Y S             G Q+H+  IK G    +  ++A+  MY KC  
Sbjct: 382 LRIKDVSLNSFVYTSIFQACSVLADFNVGAQVHADSIKRGLISYLYGESAMITMYSKCGR 441

Query: 725 LQSAEWA 745
           L  A  A
Sbjct: 442 LDYANRA 448



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDR-IRTKFQTPP 373
           +++G L +      +M   G+  +   +  LL++      L  G+ IH   IRT   T  
Sbjct: 165 SQKGHLKKTFSLYSQMVELGIRPNSTIFTRLLKSLFDPSVLEIGKQIHSLLIRTGLSTNV 224

Query: 374 GFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKE 553
             +   +  MY +CG +  A+ +  +M E+N  +W  +M              +F KM +
Sbjct: 225 SVI-TAISNMYAKCGWLEGAKLVMGQMVEKNAVAWTGLMMGCTQADKQKDALELFGKMVK 283

Query: 554 LGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQS 733
            G+     ++               G+QIH  V+K GF  +V + T V ++Y+KC   +S
Sbjct: 284 EGVKLDGFVFSVVLKACAGLEDLNLGRQIHGYVVKLGFESDVFVGTPVVDLYVKCAWFES 343

Query: 734 A 736
           A
Sbjct: 344 A 344


>ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 837

 Score =  184 bits (468), Expect = 2e-44
 Identities = 90/222 (40%), Positives = 143/222 (64%)
 Frame = +2

Query: 71  NILTANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDS 250
           +I + N+++IPS +SLKS  APL ++  +Q G++EN+HL+SL++QGK+ E   FL++M+ 
Sbjct: 28  HIKSVNFSQIPSWVSLKSTSAPLLSTQHIQTGQVENVHLVSLSKQGKMKEAREFLKQMNE 87

Query: 251 EGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLA 430
            GV V+ Q+Y+ L + CG +     G+ IH+ +R+  ++P  FL+N  LKMYC+CGS+  
Sbjct: 88  AGVAVTAQSYRCLFEKCGLMGYFSDGKFIHEWLRSTVKSPAEFLENDALKMYCDCGSLRD 147

Query: 431 AESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXX 610
           A+ +FD+M  R+  SW I++SA+ + G   K  G+FL M E G+  + SI+         
Sbjct: 148 AQKVFDEMRGRDLVSWVIMISAYVESGVLSKAVGLFLDMLECGVRPNASIFTGLLKKLDE 207

Query: 611 XXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
                 GKQ+HS VI+SG +G  +++TA+ NMY+KC  L  A
Sbjct: 208 DLHLEFGKQMHSYVIRSG-NGGGSVETAIGNMYVKCGWLDGA 248



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 51/184 (27%), Positives = 79/184 (42%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           ++   E GKL EV     EM  E V V    +  +L+ C  L+ L+ GR IH        
Sbjct: 268 MVGYTEDGKLGEVLESFAEMVRESVEVDDFVFSIVLKACAGLEELNAGRQIHGYSVKLGL 327

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
                +   ++  Y +CG   +A   F ++ E N  SW+ I+S +   G  ++   +F  
Sbjct: 328 DSEVSVGTPLVDFYVKCGEFESARRAFKRIDEPNDVSWSAIISGYCQNGQFEECLEIFQT 387

Query: 545 MKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDC 724
           +   G+  +P IY S             G Q+H+  IK GF   +   +A+  MY KC  
Sbjct: 388 LIGKGVTLNPYIYTSIFQACSAVADINFGAQVHADAIKRGFVAFLYGASAMITMYSKCGR 447

Query: 725 LQSA 736
           L  A
Sbjct: 448 LDYA 451



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 1/183 (0%)
 Frame = +2

Query: 200 EQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGF 379
           E G L +      +M   GV  +   +  LL+   +   L  G+ +H  +  +     G 
Sbjct: 172 ESGVLSKAVGLFLDMLECGVRPNASIFTGLLKKLDEDLHLEFGKQMHSYV-IRSGNGGGS 230

Query: 380 LQNCVLKMYCECGSMLAAESLFDKMPE-RNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
           ++  +  MY +CG +  A  +FD+M E ++  +W  +M  + ++G   +V   F +M   
Sbjct: 231 VETAIGNMYVKCGWLDGARLVFDQMGENKSVVAWTGLMVGYTEDGKLGEVLESFAEMVRE 290

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
            +     ++               G+QIH   +K G    V++ T + + Y+KC   +SA
Sbjct: 291 SVEVDDFVFSIVLKACAGLEELNAGRQIHGYSVKLGLDSEVSVGTPLVDFYVKCGEFESA 350

Query: 737 EWA 745
             A
Sbjct: 351 RRA 353


>ref|NP_196831.1| protein required for accD RNA editing 1 [Arabidopsis thaliana]
           gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
           gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis
           thaliana] gi|332004490|gb|AED91873.1| protein required
           for accD RNA editing 1 [Arabidopsis thaliana]
          Length = 752

 Score =  183 bits (465), Expect = 5e-44
 Identities = 95/222 (42%), Positives = 137/222 (61%)
 Frame = +2

Query: 74  ILTANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENLHLISLAEQGKLDEVHRFLEEMDSE 253
           I  AN+ +IPS +SLKS+ +        +QG++ENLHL+SL++  KL+E   FL+EMD  
Sbjct: 18  IKNANFDQIPSWVSLKSSTSSPSVKISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKA 77

Query: 254 GVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAA 433
           GV VS  +YQ L + C +L+SL HGRL+HDR+R   + P   LQNCVL+MYCEC S+  A
Sbjct: 78  GVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDA 137

Query: 434 ESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXX 613
           + LFD+M E N  S   ++SA+A++G  DK  G+F  M   G     S+Y +        
Sbjct: 138 DKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNP 197

Query: 614 XXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
                G+QIH+ VI++G   N +++T + NMY+KC  L  A+
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 45/180 (25%), Positives = 78/180 (43%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPG 376
           AEQG LD+       M + G       Y  LL++    ++L  GR IH  +         
Sbjct: 160 AEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNT 219

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            ++  ++ MY +CG ++ A+ +FD+M  + P +   +M  +   G       +F+ +   
Sbjct: 220 SIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTE 279

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           G+     ++               GKQIH+ V K G    V++ T + + YIKC   +SA
Sbjct: 280 GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESA 339



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
 Frame = +2

Query: 185 LISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQ 364
           ++   + G+  +  +   ++ +EGV      +  +L+ C  L+ L+ G+ IH  +     
Sbjct: 257 MVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGL 316

Query: 365 TPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLK 544
                +   ++  Y +C S  +A   F ++ E N  SW+ I+S +      ++    F  
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 376

Query: 545 MKELGINASPSI-YISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCD 721
           ++    +   S  Y S             G Q+H+  IK    G+   ++A+  MY KC 
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 436

Query: 722 CLQSA 736
           CL  A
Sbjct: 437 CLDDA 441


>ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Populus trichocarpa]
           gi|550347141|gb|ERP65423.1| hypothetical protein
           POPTR_0001s13120g [Populus trichocarpa]
          Length = 655

 Score =  181 bits (460), Expect = 2e-43
 Identities = 99/246 (40%), Positives = 146/246 (59%)
 Frame = +2

Query: 2   FSVTSSAMQTVVMALPKPSLPGNNILTANYTRIPSSLSLKSNIAPLQNSPRLQQGKIENL 181
           F+V+S     V++A  K  +P +    AN+++IPS +SLKS  + LQ    + + +IE  
Sbjct: 7   FAVSSLNPSPVIIAHDK--IPQSIKAAANFSQIPSWVSLKSTPSSLQTQENINKAQIER- 63

Query: 182 HLISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKF 361
                    KL E   FL++M+  G+ VSP++Y+ L + CG+++SL  GRL H++++   
Sbjct: 64  ---------KLKEAREFLKQMEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTV 114

Query: 362 QTPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFL 541
           + PP FL+N VLKMYC+CGS+  A  +FD+M ERN  SW  I+SA+A+ G  DK F +F 
Sbjct: 115 KNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFS 174

Query: 542 KMKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCD 721
            M EL    + S YI              GKQIHS  I+SG   N +++TA+SNMY+KC 
Sbjct: 175 NMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCG 234

Query: 722 CLQSAE 739
            L+ AE
Sbjct: 235 WLEGAE 240



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 44/187 (23%), Positives = 71/187 (37%)
 Frame = +2

Query: 176 NLHLISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRT 355
           N  + + AE G  D+       M       +  TY   L++      L  G+ IH     
Sbjct: 154 NTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIR 213

Query: 356 KFQTPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGV 535
                   +   +  MY +CG +  AE +F+KM E+N  +W  IM  +           +
Sbjct: 214 SGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALAL 273

Query: 536 FLKMKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIK 715
           F KM   G+     ++               G+QIH  ++K G    V+  +A+  MY +
Sbjct: 274 FAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVS--SAMITMYSR 331

Query: 716 CDCLQSA 736
           C  L  A
Sbjct: 332 CGRLDYA 338


>ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [Amborella trichopoda]
           gi|548846959|gb|ERN06163.1| hypothetical protein
           AMTR_s00016p00115350 [Amborella trichopoda]
          Length = 396

 Score =  153 bits (386), Expect = 7e-35
 Identities = 76/193 (39%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
 Frame = +2

Query: 164 GKIENLHLISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHD 343
           G +EN+HLISL++QGK  E   FL  M+S  + V PQTY  L + CG + SL  G++ H+
Sbjct: 58  GNVENVHLISLSKQGKFQEAQAFLHSMESSNIPVMPQTYVTLFEACGDMGSLSFGKIFHE 117

Query: 344 RIRTKFQTPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDK 523
           R++   + P  FL N +L MY + GS++ A  +F++MP +N  +W+I++SAF+  G+  +
Sbjct: 118 RMKRVEKEPEIFLGNHLLSMYSKLGSIVDAFQVFNEMPSKNSVTWSIMVSAFSQNGFVSE 177

Query: 524 VFGVFLKMKELGINASPSIYIS-XXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVS 700
              +   M  +GI+++ S+Y+S              GKQ+HSQ+IK GF  ++ ++TA+ 
Sbjct: 178 ALSLLSDMNVIGISSNQSVYVSLLRACSNSPRGPEPGKQLHSQIIKLGFIPDLLIETALC 237

Query: 701 NMYIKCDCLQSAE 739
           NMYIKC  L SA+
Sbjct: 238 NMYIKCRELDSAK 250



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
 Frame = +2

Query: 191 SLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQL-QSLHHGRLIHDRIRTKFQT 367
           + ++ G + E    L +M+  G+  +   Y  LL+ C    +    G+ +H +I      
Sbjct: 168 AFSQNGFVSEALSLLSDMNVIGISSNQSVYVSLLRACSNSPRGPEPGKQLHSQIIKLGFI 227

Query: 368 PPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKM 547
           P   ++  +  MY +C  + +A+ +FD MPE+N  +W  +MS +   G  +    ++ K+
Sbjct: 228 PDLLIETALCNMYIKCRELDSAKLIFDNMPEKNAVTWTAVMSGYTQAGKEEAALALYQKI 287

Query: 548 KELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCL 727
             +G      ++               GK +H+ ++K G    V++ T + +MY KC  +
Sbjct: 288 LMVGNEPDGFVFSVILKACAGLNNLKFGKLVHAHILKLGMEKEVSVGTPLVDMYFKCGMV 347

Query: 728 Q 730
           +
Sbjct: 348 E 348


>ref|XP_002299342.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  151 bits (382), Expect = 2e-34
 Identities = 74/166 (44%), Positives = 105/166 (63%)
 Frame = +2

Query: 242 MDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGS 421
           M+  G+ VSP++Y+ L + CG+++SL  GRL H++++   + PP FL+N VLKMYC+CGS
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 422 MLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXX 601
           +  A  +FD+M ERN  SW  I+SA+A+ G  DK F +F  M EL    + S YI     
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 602 XXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSAE 739
                    GKQIHS  I+SG   N +++TA+SNMY+KC  L+ AE
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAE 166



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 4/193 (2%)
 Frame = +2

Query: 176 NLHLISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRT 355
           N  + + AE G  D+       M       +  TY   L++      L  G+ IH     
Sbjct: 80  NTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIR 139

Query: 356 KFQTPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGV 535
                   +   +  MY +CG +  AE +F+KM E+N  +W  IM  +           +
Sbjct: 140 SGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALAL 199

Query: 536 FLKMKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIK 715
           F KM   G+     ++               G+QIH  ++K G    V++ T + + Y+K
Sbjct: 200 FAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVK 259

Query: 716 CDCLQSA----EW 742
           C  L+SA    EW
Sbjct: 260 CSNLESATKAFEW 272



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/166 (22%), Positives = 71/166 (42%)
 Frame = +2

Query: 239 EMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECG 418
           +M +EGV +    +  +L+ C  L+ L+ GR IH  I          +   ++  Y +C 
Sbjct: 202 KMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCS 261

Query: 419 SMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXX 598
           ++ +A   F+ + E N  SW+ +++ +   G  ++    F  ++   ++ +   Y S   
Sbjct: 262 NLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQ 321

Query: 599 XXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
                     G Q H+  IKS        ++A+  MY +C  L  A
Sbjct: 322 ACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYA 367


>gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  105 bits (262), Expect = 2e-20
 Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
 Frame = +2

Query: 176 NLHLISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRT 355
           N  ++   + G ++E  + L EM   G+ +   T   LL +C    +L  GR IH     
Sbjct: 213 NAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMK 272

Query: 356 KFQTPPGFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGV 535
                   + NC+L MY +CGS+  A  +FDKM  ++  SW II+  +AD G ++  F +
Sbjct: 273 ARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEI 332

Query: 536 FLKMKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIK 715
           F KM++ G+  +   YI+             GK +HS ++ +G   ++A+ TA+  MY K
Sbjct: 333 FQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAK 392

Query: 716 C----DCLQSAE 739
           C    DC Q  E
Sbjct: 393 CGSYKDCRQVFE 404



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
 Frame = +2

Query: 176 NLHLISLAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRT 355
           N  +  LAE G  +E      +M  EG++ +  TY  LL  C    +LH GR IH R+  
Sbjct: 415 NTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRV-- 472

Query: 356 KFQTPPGFL-----QNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTD 520
                 GF+     QN ++ MY  CGS+  A  LF+KM  ++  SW  ++   A  G   
Sbjct: 473 ---VKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGA 529

Query: 521 KVFGVFLKMKELGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVS 700
           +   VF  M++ G+  +   Y S             G++IH QVI++G   +  +   + 
Sbjct: 530 EALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLV 589

Query: 701 NMYIKCDCLQSA 736
           NMY  C  ++ A
Sbjct: 590 NMYSMCGSVKDA 601



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 44/181 (24%), Positives = 81/181 (44%)
 Frame = +2

Query: 194  LAEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPP 373
            LA+ G   E     ++M   G+  +  TY  +L  C    +L  GR IH ++        
Sbjct: 522  LAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATD 581

Query: 374  GFLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKE 553
              + N ++ MY  CGS+  A  +FD+M +R+  ++  ++  +A      +   +F +++E
Sbjct: 582  AHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 641

Query: 554  LGINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQS 733
             G+      YI+              K+IHS V+K G+  + ++  A+ + Y KC     
Sbjct: 642  EGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSD 701

Query: 734  A 736
            A
Sbjct: 702  A 702



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 41/180 (22%), Positives = 86/180 (47%)
 Frame = +2

Query: 197 AEQGKLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPG 376
           A+ G  +      ++M  EGV+ +  TY ++L       +L  G+ +H  I         
Sbjct: 321 ADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDL 380

Query: 377 FLQNCVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKEL 556
            +   ++KMY +CGS      +F+K+  R+  +W  ++   A+ G  ++   ++ +M+  
Sbjct: 381 AVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQRE 440

Query: 557 GINASPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           G+  +   Y+              G++IHS+V+K GF  ++++  A+ +MY +C  ++ A
Sbjct: 441 GMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDA 500



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 37/176 (21%), Positives = 80/176 (45%), Gaps = 2/176 (1%)
 Frame = +2

Query: 215 DEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCV 394
           D     ++ +  +G  V+   Y  +L+ C +++ L  GR +H+ I         +  N +
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 395 LKMYCECGSMLAAESLFDKM--PERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINA 568
           + MY +CGS+  A  +++K+   ER   SW  ++  +   G+ ++   +  +M++ G+  
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 569 SPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
             +  +              G++IH + +K+    +V +   + NMY KC  +  A
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEA 298



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 36/124 (29%), Positives = 54/124 (43%)
 Frame = +2

Query: 218  EVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVL 397
            E  +  + +  EG+     TY ++L  C    SL   + IH  +          L N ++
Sbjct: 631  EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALV 690

Query: 398  KMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPS 577
              Y +CGS   A  +FDKM +RN  SW  I+   A  G    V  +F +MK  GI     
Sbjct: 691  STYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIV 750

Query: 578  IYIS 589
             ++S
Sbjct: 751  TFVS 754


>ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Citrus sinensis]
          Length = 1390

 Score =  104 bits (260), Expect = 3e-20
 Identities = 53/176 (30%), Positives = 90/176 (51%)
 Frame = +2

Query: 209 KLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQN 388
           K D + + +  + + G  VS   Y HL Q C   +++   R +   + T + TPP FL N
Sbjct: 35  KSDGLRKAVSVLFASGEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN 94

Query: 389 CVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINA 568
             ++ Y +CG++  A  LFD+MPER+ GSW  ++ A+   G+      +FL M   G++A
Sbjct: 95  RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGGTLELFLDMNHSGVSA 154

Query: 569 SPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
           +   Y +              KQ+H  ++K GF GNV +++++ + Y KC  +  A
Sbjct: 155 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 210



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 40/166 (24%), Positives = 73/166 (43%)
 Frame = +2

Query: 239 EMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECG 418
           +M+  GV  +  TY ++L++  +   L   + +H  I  +       L++ ++  Y +C 
Sbjct: 146 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 205

Query: 419 SMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXX 598
            M  A  +FD +  +N  SW +I+  +   G   +   VF KM    I      + +   
Sbjct: 206 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNVKEAVVVFFKMLREDIRPLNFTFANALF 265

Query: 599 XXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
                     G QIH  +IK  F G+  +  +++ MY+KC  L+ A
Sbjct: 266 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 311



 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
 Frame = +2

Query: 287 LLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAAESLFDKMPERN 466
           +L  C  L  +  G+ +H  I     +   F+ N +L MY +CG++ +A   F +M +R 
Sbjct: 395 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 454

Query: 467 PG-SWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXXXXXXXGKQIH 643
              SW  +++ +A  G  ++    F +M +     S   + +             GKQIH
Sbjct: 455 DKVSWNAVLTGYARRGQREEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 513

Query: 644 SQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
             +I++ +  NV    A+  +Y KC CL+ A
Sbjct: 514 CFMIRNCYEINVVCRGALVEVYTKCRCLEYA 544


>ref|XP_006434326.1| hypothetical protein CICLE_v10000445mg [Citrus clementina]
           gi|557536448|gb|ESR47566.1| hypothetical protein
           CICLE_v10000445mg [Citrus clementina]
          Length = 706

 Score =  104 bits (259), Expect = 4e-20
 Identities = 51/170 (30%), Positives = 89/170 (52%)
 Frame = +2

Query: 209 KLDEVHRFLEEMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQN 388
           K + + + +  + + G  VS   Y HL Q C   +++   R +   + T + TPP FL N
Sbjct: 35  KSNGLRKAISVLFASGEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN 94

Query: 389 CVLKMYCECGSMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINA 568
             ++ Y +CG++  A  LFD+MPER+ GSW  ++ A+   G+  +   +FL M   G++A
Sbjct: 95  RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 154

Query: 569 SPSIYISXXXXXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKC 718
           +   Y +              KQ+H  ++K GF GNV +++++ + Y KC
Sbjct: 155 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 204



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
 Frame = +2

Query: 287 LLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECGSMLAAESLFDKMPERN 466
           +L  C  L  +  G+ +H  I     +   F+ N +L MY +CG++ +A   F +M +R 
Sbjct: 395 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 454

Query: 467 PG-SWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXXXXXXXXXXXXGKQIH 643
              SW  +++ +A  G +++    F +M +     S   + +             GKQIH
Sbjct: 455 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 513

Query: 644 SQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
             VI++ +  NV    A+  +Y KC CL+ A
Sbjct: 514 CFVIRNCYEINVVCRGALVEVYTKCCCLEYA 544



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 38/166 (22%), Positives = 73/166 (43%)
 Frame = +2

Query: 239 EMDSEGVLVSPQTYQHLLQTCGQLQSLHHGRLIHDRIRTKFQTPPGFLQNCVLKMYCECG 418
           +M+  GV  +  TY ++L++  +   L   + +H  I  +       L++ ++  Y +C 
Sbjct: 146 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 205

Query: 419 SMLAAESLFDKMPERNPGSWAIIMSAFADEGWTDKVFGVFLKMKELGINASPSIYISXXX 598
            M  +  +FD +  +N  SW +I+  +   G   +   +F KM    I      + +   
Sbjct: 206 VMTDSRRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 265

Query: 599 XXXXXXXXXXGKQIHSQVIKSGFHGNVAMDTAVSNMYIKCDCLQSA 736
                     G QIH  +IK  F G+  +  +++ MY+KC  L+ A
Sbjct: 266 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 311