BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00007487
         (1884 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   565   e-158
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              558   e-156
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   537   e-150
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   534   e-149
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th...   526   e-146
gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Th...   526   e-146
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   510   e-142
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   502   e-139
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   493   e-136
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   492   e-136
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   491   e-136
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...   485   e-134
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...   483   e-134
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   481   e-133
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...   480   e-133
ref|XP_002308049.1| predicted protein [Populus trichocarpa]           474   e-131
gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus...   469   e-129
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   466   e-128
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   464   e-128
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana...   463   e-127

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  565 bits (1456), Expect = e-158
 Identities = 296/527 (56%), Positives = 362/527 (68%), Gaps = 12/527 (2%)
 Frame = +1

Query: 340  TEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDDHSPC 519
            T G +E VE V+FSF TDEEV ++S  KIT+P++LD V RP PGGLYD A+G +D+++PC
Sbjct: 54   TSGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPC 113

Query: 520  KSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANCVSQL 699
            +SCGQRSF+CPGHCGHIDLV   YNPLLF +LHNLL+ TCFFC HF++S   V   VSQL
Sbjct: 114  QSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQL 173

Query: 700  ELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXXXXXX 879
            ELI+KGDVVGA+ LD S++ +E        S       S  +C                 
Sbjct: 174  ELISKGDVVGAKNLD-SISPSES-------SYPEDSDGSHVSCSS--------------- 210

Query: 880  XXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNCEAMN 1059
                     +  ++  D     L+  +  W S Q  EAMSV++ FLK +   C NC+A +
Sbjct: 211  ---------TVNSSARDNCSVHLKQQE--WTSLQCIEAMSVMDNFLKLKHRDCKNCKAKS 259

Query: 1060 PQIKKPTFGWFHMKNVSTDATRANIIRGRKFE--------DQYSSLVVNANSA--WEDDF 1209
            PQ+ KPTFGWFHM  +S   TRAN+IRG K E        ++ SS V N N    W D  
Sbjct: 260  PQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGV 319

Query: 1210 NNTGTNSFAAASDGIRDSSAK--DPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWEN 1383
            +   T+S  A +DGI+D+  K  +    +  +EF K K+FFSGPLLPSEVR++M+ LWEN
Sbjct: 320  DTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWEN 379

Query: 1384 EARLCSFICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLG 1563
            EA LCSFI DI  ERL      AGYSMFFL +ILVPPIKFRP +KG  +VMEH  T+LLG
Sbjct: 380  EAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLG 439

Query: 1564 KVLQSNIALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEK 1743
            KVLQ+NIAL NAH N +ERS+I++RW+DLQQSINVL+D KT  GQG++D  SGICQLLEK
Sbjct: 440  KVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEK 499

Query: 1744 KEGIFRQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            KEG+FRQKMMGKRVNFACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 500  KEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE 546


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  558 bits (1439), Expect = e-156
 Identities = 291/521 (55%), Positives = 357/521 (68%), Gaps = 2/521 (0%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            MA   EG +E VE V+FSF TDEEV ++S  KIT+P++LD V RP PGGLYD A+G +D+
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
            ++PC+SCGQRSF+CPGHCGHIDLV   YNPLLF +LHNLL+ TCFFC HF++S   V   
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
            VSQLELI+KGDVVGA+ LD S++ +E        S       S  +C             
Sbjct: 121  VSQLELISKGDVVGAKNLD-SISPSES-------SYPEDSDGSHVSCSS----------- 161

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                         +  ++  D     L+  +  W S Q  EAMSV++ FLK +   C NC
Sbjct: 162  -------------TVNSSARDNCSVHLKQQE--WTSLQCIEAMSVMDNFLKLKHRDCKNC 206

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTN 1227
            +A +PQ+ KPTFGWFHM  +S   TRAN+IRG K E   + +            +   T+
Sbjct: 207  KAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLNGV------------DTDETH 254

Query: 1228 SFAAASDGIRDSSAK--DPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCS 1401
            S  A +DGI+D+  K  +    +  +EF K K+FFSGPLLPSEVR++M+ LWENEA LCS
Sbjct: 255  SSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCS 314

Query: 1402 FICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSN 1581
            FI DI  ERL      AGYSMFFL +ILVPPIKFRP +KG  +VMEH  T+LLGKVLQ+N
Sbjct: 315  FISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQAN 374

Query: 1582 IALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIFR 1761
            IAL NAH N +ERS+I++RW+DLQQSINVL+D KT  GQG++D  SGICQLLEKKEG+FR
Sbjct: 375  IALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFR 434

Query: 1762 QKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            QKMMGKRVNFACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 435  QKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE 475


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  537 bits (1383), Expect = e-150
 Identities = 287/523 (54%), Positives = 353/523 (67%), Gaps = 9/523 (1%)
 Frame = +1

Query: 343  EGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDDHSPCK 522
            +GASEAVE V FSFMTDEEV RHSV+K+T+P LLDG+  P P GLYD AMGPLD +S CK
Sbjct: 3    QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 523  SCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANCVSQLE 702
             C Q +  C GHCGHI+LV P YNPLLF MLHNLL+ TCF+CFHFR+SR EV  CVS+LE
Sbjct: 63   FCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 703  LIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXXXXXXX 882
            LIAKGDVVGA+ +DA   +   ++         +   S  +C                  
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDR--------EESEGSHMSCAMDD-------------- 158

Query: 883  XXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNCEAMNP 1062
                         + D  EY   N   SWD+FQFTEAM+V+++ LK++   C NC+A NP
Sbjct: 159  -----------LNMQDHREY---NKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNP 204

Query: 1063 QIKKPTFGWFHMKNVSTDATRANIIR-GRKF--------EDQYSSLVVNANSAWEDDFNN 1215
            +I+KP+FG FHM ++S    R N I  GR+F        E+  S  VVNA     +    
Sbjct: 205  KIRKPSFGRFHM-DISNKQIRENYINSGRRFNLHDTGGSEENPSPEVVNAT----EPLGE 259

Query: 1216 TGTNSFAAASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARL 1395
              T+    ++DG+ +S A+           E+ K+ FS   LPS+VR +++HLWENEA L
Sbjct: 260  AETSLCVTSTDGVENSKARKRQGGDQSDVVEQQKDSFSVAHLPSQVRSIIEHLWENEAPL 319

Query: 1396 CSFICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQ 1575
            C+F CDIQ +      K AG SMFFL SILVPPIKFRP AKGGD++MEH HT+LLGKV+Q
Sbjct: 320  CTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKFRPPAKGGDSIMEHPHTVLLGKVVQ 379

Query: 1576 SNIALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGI 1755
            +NIAL NAH N A RS+I++R +DLQQS+NVL+DSKT +G G+KD  SGICQ+LEKKEGI
Sbjct: 380  ANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSKTASGPGQKDVGSGICQMLEKKEGI 439

Query: 1756 FRQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            FRQKMMGKRVNFACR+VISPDPYL+VNEIGIPPYFALRLTYPE
Sbjct: 440  FRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPE 482


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  534 bits (1376), Expect = e-149
 Identities = 284/523 (54%), Positives = 350/523 (66%), Gaps = 9/523 (1%)
 Frame = +1

Query: 343  EGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDDHSPCK 522
            +GASE VE V FSFMTDEEV RHSV+K+T+P LLDG+  P P GLYD AMGPLD +S CK
Sbjct: 3    QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 523  SCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANCVSQLE 702
             C Q +  C GHCGHI+LV P YNPLLF MLHNLL+ TCF+CFHFR+SR EV  CVS+LE
Sbjct: 63   FCSQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 703  LIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXXXXXXX 882
            LIAKGDVVGA+ +DA   +   ++         +   S  +C                  
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDR--------EESEGSHMSCTMDD-------------- 158

Query: 883  XXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNCEAMNP 1062
                         V D  EY   N   SWD+FQFTEAM+V+++ LK++   C NC+A NP
Sbjct: 159  -----------LNVRDHCEY---NKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNP 204

Query: 1063 QIKKPTFGWFHMKNVSTDATRANIIR-GRKF--------EDQYSSLVVNANSAWEDDFNN 1215
            +I+KP+FG FHM ++S    R N I  GR+F        E+  S  VVNA     +    
Sbjct: 205  KIRKPSFGRFHM-DISNKQIRENYINSGRRFNLHDTGGSEENPSPEVVNAT----EPLGE 259

Query: 1216 TGTNSFAAASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARL 1395
              T+    ++DG+ +S  +           E+ K+ FS   LPS+VR +++HLWENEA L
Sbjct: 260  AETSLCVTSTDGVENSKGRKRQGGDQSDVVEQQKDSFSVAHLPSQVRSIIEHLWENEAPL 319

Query: 1396 CSFICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQ 1575
            C+F CDIQ +      K AG SMFFL SILVPP+KFRP AKGGD++MEH HT+LLGKV+Q
Sbjct: 320  CTFFCDIQSQHRNTSGKVAGPSMFFLDSILVPPVKFRPPAKGGDSIMEHPHTVLLGKVIQ 379

Query: 1576 SNIALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGI 1755
            +NIAL NAH N A RS+I++R +DLQQS+NVL+DSKT +G G+KD  SGICQ+LEKKEGI
Sbjct: 380  ANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSKTASGPGQKDVGSGICQMLEKKEGI 439

Query: 1756 FRQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            FRQKMMGKRVNFACR+VISPDPYL+VNEIGIPPYFA RLTYPE
Sbjct: 440  FRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFASRLTYPE 482


>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  526 bits (1354), Expect = e-146
 Identities = 285/530 (53%), Positives = 341/530 (64%), Gaps = 11/530 (2%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            MAQ TEGA+++VE VRF+FMT EEV +HS +K+TN  LLD +DRP PGGLYDA +GPL+D
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             +PCKSCG    HCPGHCGHIDLV P YNPLLF  LH LL+  CFFC+HFR+ + EV  C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
            VSQL+LI  GD+VGA+RLD+   +      +N  S ++     ++   K K+        
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESGSIVHNSEAVKPKE-------- 172

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                                             W S Q  EAMSVLN FLK +   C NC
Sbjct: 173  ---------------------------------WTSLQLMEAMSVLNNFLKLKYNKCKNC 199

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWED--DFNNTG 1221
            +A NP I KP FGW HM  +     R N+IRG K  D +S     A S  ED  D +++G
Sbjct: 200  DAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSD---EAGSGLEDADDVSSSG 256

Query: 1222 TNSFAAASD-------GIRDSSAKDPLTE-RVLLEFEKHKNFFSGPLLPSEVREVMKHLW 1377
                 A  D       G   + AK    + +V LEF K KN FSGPLLPSEV+++ K LW
Sbjct: 257  NGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFMKQKNLFSGPLLPSEVKKITKLLW 316

Query: 1378 ENEARLCSFICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLL 1557
            ENE  LCS I DIQ +      K  GYSMFFL +ILVPPIKFR   KGGD+VMEH  T+L
Sbjct: 317  ENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQTVL 373

Query: 1558 LGKVLQSNIALKNAHTNTAERSRIVNR-WLDLQQSINVLYDSKTMTGQGKKDGSSGICQL 1734
            L KVLQ+NI+L NA+TN  + S+ V R W+DLQQS+N+L+DSKT   QG+ D SSGICQL
Sbjct: 374  LSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGR-DVSSGICQL 432

Query: 1735 LEKKEGIFRQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            LEKKEG+FRQKMMGKRVNFACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 433  LEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE 482


>gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  526 bits (1354), Expect = e-146
 Identities = 285/530 (53%), Positives = 341/530 (64%), Gaps = 11/530 (2%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            MAQ TEGA+++VE VRF+FMT EEV +HS +K+TN  LLD +DRP PGGLYDA +GPL+D
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             +PCKSCG    HCPGHCGHIDLV P YNPLLF  LH LL+  CFFC+HFR+ + EV  C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
            VSQL+LI  GD+VGA+RLD+   +      +N  S ++     ++   K K+        
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESGSIVHNSEAVKPKE-------- 172

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                                             W S Q  EAMSVLN FLK +   C NC
Sbjct: 173  ---------------------------------WTSLQLMEAMSVLNNFLKLKYNKCKNC 199

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWED--DFNNTG 1221
            +A NP I KP FGW HM  +     R N+IRG K  D +S     A S  ED  D +++G
Sbjct: 200  DAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSD---EAGSGLEDADDVSSSG 256

Query: 1222 TNSFAAASD-------GIRDSSAKDPLTE-RVLLEFEKHKNFFSGPLLPSEVREVMKHLW 1377
                 A  D       G   + AK    + +V LEF K KN FSGPLLPSEV+++ K LW
Sbjct: 257  NGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFMKQKNLFSGPLLPSEVKKITKLLW 316

Query: 1378 ENEARLCSFICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLL 1557
            ENE  LCS I DIQ +      K  GYSMFFL +ILVPPIKFR   KGGD+VMEH  T+L
Sbjct: 317  ENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQTVL 373

Query: 1558 LGKVLQSNIALKNAHTNTAERSRIVNR-WLDLQQSINVLYDSKTMTGQGKKDGSSGICQL 1734
            L KVLQ+NI+L NA+TN  + S+ V R W+DLQQS+N+L+DSKT   QG+ D SSGICQL
Sbjct: 374  LSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGR-DVSSGICQL 432

Query: 1735 LEKKEGIFRQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            LEKKEG+FRQKMMGKRVNFACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 433  LEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE 482


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  510 bits (1313), Expect = e-142
 Identities = 270/521 (51%), Positives = 340/521 (65%), Gaps = 2/521 (0%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            ++  ++GA+E+++ + FSF+TDEEV +HS +KITNP LLD V+RP PGGLYD A+GPL +
Sbjct: 4    ISSVSKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSE 63

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             + CK+CGQRS +CPGHCGHIDLV P YNPLLF  LH LL+ TCF CFHFR  R +V  C
Sbjct: 64   RTICKTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKC 123

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
            + QLELI KGD+VGA+RL+ S++ +E            +   S  +C             
Sbjct: 124  IKQLELIVKGDIVGAKRLE-SVSPSEA-------LYPEESDLSHESCPT----------- 164

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                        +  G    DG         + W S QFTEAMSVLN FLK +   C NC
Sbjct: 165  ------------IHSGVQCNDGEH----TRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNC 208

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTN 1227
            E+ NP I KPTFGWFH   +S  + RAN+I G +      S +       ED        
Sbjct: 209  ESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGGLLGSEIEGTTDV-ED-------- 259

Query: 1228 SFAAASDGIRDSSAKDPLTE--RVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCS 1401
               AA  G + S  K    +  + +LEF + K+ FS  LLPSEV+E ++ LW+NEAR+CS
Sbjct: 260  ---AAEPGDQHSGTKKHKKKERKEVLEFTRQKSTFSKQLLPSEVKEKLELLWKNEARICS 316

Query: 1402 FICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSN 1581
            FI D+Q +      + AG +MFFL +ILVPPIKFRP  KGGD+VMEH  T+LL KVLQSN
Sbjct: 317  FISDLQQQEFG--KRKAGPAMFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSN 374

Query: 1582 IALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIFR 1761
            I+L +AH N  E S+IV RWLDLQQSIN L+DSKT  G G+++G+ GICQLLEKKEG+FR
Sbjct: 375  ISLGDAHINK-EHSKIVRRWLDLQQSINTLFDSKTAKGPGQREGAPGICQLLEKKEGLFR 433

Query: 1762 QKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            QKMMGKRVN+ACR+VISPDPY+ VNEIGIPP FA++LTYPE
Sbjct: 434  QKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLTYPE 474


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  502 bits (1292), Expect = e-139
 Identities = 270/526 (51%), Positives = 335/526 (63%), Gaps = 7/526 (1%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            MAQTTEGASE+V+ V FSFMT+EEV + SV+K+T P+LLDG+ RP  GGLYD AMG LD+
Sbjct: 1    MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             + CKSCGQR F+CPGHCGHIDLV P YNPLLF +LHN L+ TCF C HFR+    V NC
Sbjct: 61   TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENC 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
             + LELI  G++  A+ L+           W  ++ K++ ++S +     +K        
Sbjct: 121  KTLLELILDGEIAKAKELEEE---------W--MNSKSRTKSSHSMYTYERKN------- 162

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                                            +W S QF+EA+SV+ KFLK +  +C  C
Sbjct: 163  ----------------------------GQPETWTSLQFSEAISVVTKFLKPKQSNCKYC 194

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTN 1227
             A +P+I KPTFGWFHMK ++    RAN IR  K                          
Sbjct: 195  GAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSK------------------------PV 230

Query: 1228 SFAAASDGIRDSSAKDPLTERVLLEFEK-------HKNFFSGPLLPSEVREVMKHLWENE 1386
            S ++ ++G+  S  ++  TE  + +FE         KNF SG LLPSEV++++K LW+NE
Sbjct: 231  SVSSGAEGV-SSLEEETTTEATVEDFEDVSPEVFMQKNFSSGHLLPSEVKDILKRLWKNE 289

Query: 1387 ARLCSFICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGK 1566
            A LCSFI DI  +        AG+SMFFL S+LVPPIKFRP AKGGD+VMEH  T+LL K
Sbjct: 290  ALLCSFISDISQQG---HGNKAGHSMFFLESVLVPPIKFRPPAKGGDSVMEHPQTVLLNK 346

Query: 1567 VLQSNIALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKK 1746
            VLQSNI+L N H N +E S+IV  W+DLQQSIN+L+DSK+  G GK D S GICQLLEKK
Sbjct: 347  VLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKNDASLGICQLLEKK 406

Query: 1747 EGIFRQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            EG+FRQKMMGKRVNFACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 407  EGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE 452


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  493 bits (1268), Expect = e-136
 Identities = 262/522 (50%), Positives = 334/522 (63%), Gaps = 3/522 (0%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            M QTTE  +E+V+ V FSF+TDEEV + S +K+  P+LLD V RP PGGLYD  +GPLD+
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLKEPLLLDRVGRPLPGGLYDPILGPLDE 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             S CK+CGQR F CPGH GHIDLV+P YNPLLF +L+ LLK  CFFC HF++SR EV  C
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVPVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
            V +LELI KGD++ A+ LD  L     N   + +S    K +      +G          
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVS---NKSSCSMVTPRGN--------- 168

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                               YD          + W S QF EA   L +FLK     C NC
Sbjct: 169  -------------------YDNVRNL---KPQEWTSLQFAEAKLALLQFLKIETTKCGNC 206

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTN 1227
            +A NP+I KPTFGW HM  +     RAN+IRG    + +S      +     D +   T+
Sbjct: 207  KAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLGETFSGGEEEKDLGASSDVDAPETH 266

Query: 1228 SFAAASDGIRDSSAK--DPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCS 1401
            SF     G +D++A+     +  V   F+K K+ FSGPLLPS+V+++++ LWENE  LCS
Sbjct: 267  SFNGTFPGTQDTAARRHQKGSGAVPSGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCS 326

Query: 1402 FICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSN 1581
            FI D+Q +      K AG+S+FFLG++LVPPIKFR  +KGGD+VMEH  T+LL KVLQ+N
Sbjct: 327  FISDMQQQGF---GKKAGHSIFFLGAVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQAN 383

Query: 1582 IALKNAHTNTAERSRI-VNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIF 1758
            I L NA+ N  + ++I V RW++LQQS+NVL+D K   GQ  +D +SGICQLLEKKEG+F
Sbjct: 384  IYLANAYVNQPDNAKIIVTRWMNLQQSVNVLFDGKNAAGQ--RDMASGICQLLEKKEGLF 441

Query: 1759 RQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            RQK+MGKRVN+ACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 442  RQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPE 483


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  492 bits (1267), Expect = e-136
 Identities = 263/522 (50%), Positives = 334/522 (63%), Gaps = 3/522 (0%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            M QTTE  +E+V+ V FSF+TDEEV + S +K+T P+LLD V RP PGGLYD  +GPLD+
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLTEPLLLDRVSRPLPGGLYDPILGPLDE 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             S CK+CGQR F CPGH GHIDLV+  YNPLLF +L+ LLK  CFFC HF++SR EV  C
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVSVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
            V +LELI KGD++ A+ LD  L     N   + +S    K +      +G          
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVS---NKSSCSMVTPRGN--------- 168

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                               YD          + W S QF EA   L +FLK     C NC
Sbjct: 169  -------------------YDNVRNL---KPQEWTSLQFAEAKLALLQFLKIETTKCGNC 206

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTN 1227
            +A NP+I KPTFGW HM  +     RAN+IRG    + +S      +     D +   T+
Sbjct: 207  KAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLGETFSGGEEEKDLGTSSDVDAPETH 266

Query: 1228 SFAAASDGIRDSSAK--DPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCS 1401
            SF  A  G +D++A+     +  V   F+K K+ FSGPLLPS+V+++++ LWENE  LCS
Sbjct: 267  SFNGAFPGTQDTAARRHQKGSGAVPSGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCS 326

Query: 1402 FICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSN 1581
            FI D+Q +      K AG+S+FFLG +LVPPIKFR  +KGGD+VMEH  T+LL KVLQ+N
Sbjct: 327  FISDMQQQGF---GKKAGHSIFFLGVVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQAN 383

Query: 1582 IALKNAHTNTAERSR-IVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIF 1758
            I L NA+ N  + ++ IV RW++LQQS+NVL+D K   GQ  +D +SGICQLLEKKEG+F
Sbjct: 384  IYLANAYVNQPDNAKVIVARWMNLQQSVNVLFDGKNAAGQ--RDVASGICQLLEKKEGLF 441

Query: 1759 RQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            RQK+MGKRVN+ACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 442  RQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPE 483


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  491 bits (1263), Expect = e-136
 Identities = 264/520 (50%), Positives = 329/520 (63%), Gaps = 7/520 (1%)
 Frame = +1

Query: 346  GASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDDHSPCKS 525
            GASE+V+ V FSFMT+EEV + SV+K+T P+LLDG+ RP  GGLYD AMG LD+ + CKS
Sbjct: 13   GASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDETTLCKS 72

Query: 526  CGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANCVSQLEL 705
            CGQR F+CPGHCGHIDLV P YNPLLF +LHN L+ TCF C HFR+    V NC + LEL
Sbjct: 73   CGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLLEL 132

Query: 706  IAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXXXXXXXX 885
            I  G++  A+ L+           W  ++ K++ ++S +     +K              
Sbjct: 133  ILDGEIAKAKELEEE---------W--MNSKSRTKSSHSMYTYERKN------------- 168

Query: 886  XXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNCEAMNPQ 1065
                                      +W S QF+EA+SV+ KFLK +  +C  C A +P+
Sbjct: 169  ----------------------GQPETWTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPK 206

Query: 1066 IKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTNSFAAAS 1245
            I KPTFGWFHMK ++    RAN IR  K                          S ++ +
Sbjct: 207  ITKPTFGWFHMKGLAGVQKRANAIRRSK------------------------PVSVSSGA 242

Query: 1246 DGIRDSSAKDPLTERVLLEFEK-------HKNFFSGPLLPSEVREVMKHLWENEARLCSF 1404
            +G+  S  ++  TE  + +FE         KNF SG LLPSEV++++K LW+NEA LCSF
Sbjct: 243  EGV-SSLEEETTTEATVEDFEDVSPEVFMQKNFSSGHLLPSEVKDILKRLWKNEALLCSF 301

Query: 1405 ICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSNI 1584
            I DI  +        AG+SMFFL S+LVPPIKFRP AKGGD+VMEH  T+LL KVLQSNI
Sbjct: 302  ISDISQQG---HGNKAGHSMFFLESVLVPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNI 358

Query: 1585 ALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIFRQ 1764
            +L N H N +E S+IV  W+DLQQSIN+L+DSK+  G GK D S GICQLLEKKEG+FRQ
Sbjct: 359  SLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAAGPGKNDASLGICQLLEKKEGMFRQ 418

Query: 1765 KMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            KMMGKRVNFACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 419  KMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPE 458


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score =  485 bits (1249), Expect = e-134
 Identities = 254/523 (48%), Positives = 336/523 (64%), Gaps = 2/523 (0%)
 Frame = +1

Query: 322  LKMAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPL 501
            +  AQTTEGAS+ VE VRFSFMT+++V +HS +K+T+P+LLD V+RP PGGLYD  MGPL
Sbjct: 1    MAQAQTTEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPL 60

Query: 502  DDHSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVA 681
            +D   CKSCGQ    CPGHCGHI+LV P Y+PLLF +L+N L+ TCFFC HF +   +V 
Sbjct: 61   NDKEACKSCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVK 120

Query: 682  NCVSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXX 861
             CVSQL+LI KGD+V A++L+     T  N               + +C+ G        
Sbjct: 121  KCVSQLKLIMKGDIVSAKQLEVKSDSTSTNS-----------EDIEVSCESG-------- 161

Query: 862  XXXXXXXXXXXXXRVSFGTTVYDGTEYCLENN--DRSWDSFQFTEAMSVLNKFLKSRPPS 1035
                                  D ++ C + +  D+ W S QF E  +V+  F+K     
Sbjct: 162  -------------------VTNDSSQECEDPDMEDQRWTSLQFAEVTAVMKNFMKLTSKE 202

Query: 1036 CPNCEAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNN 1215
            C  C+A NP+++KP FGW  MK ++  A  AN+IRG K +   SS+         ++ ++
Sbjct: 203  CNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKVKKSTSSV---------ENPDD 253

Query: 1216 TGTNSFAAASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARL 1395
            +G ++ + A D   D   ++  TE +  EFEK K+     LLPSEVR ++K+LWENE   
Sbjct: 254  SGIDALSEAEDS--DKEKREKSTE-IAKEFEKQKDT-KRDLLPSEVRAILKNLWENEHEY 309

Query: 1396 CSFICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQ 1575
            CSFI D+     +  S+   YSMFFL S+LVPPIKFRP  KGGD+VMEH  T+ L KVL 
Sbjct: 310  CSFIGDLW----QSGSEKIDYSMFFLESVLVPPIKFRPPTKGGDSVMEHPQTVGLNKVLL 365

Query: 1576 SNIALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGI 1755
            SNI L NA TN  ++S++++RW++LQ+S+NVL+DSK  + Q +KDG SGICQLLEKKEG+
Sbjct: 366  SNITLGNACTNKLDQSKVISRWMNLQESVNVLFDSKAASVQSQKDG-SGICQLLEKKEGL 424

Query: 1756 FRQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            FRQKMMGKRVN ACR+VISPDPY+AVNEIGIPP FAL+L YPE
Sbjct: 425  FRQKMMGKRVNHACRSVISPDPYIAVNEIGIPPCFALKLIYPE 467


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
            gi|557103957|gb|ESQ44311.1| hypothetical protein
            EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score =  483 bits (1244), Expect = e-134
 Identities = 255/521 (48%), Positives = 341/521 (65%)
 Frame = +1

Query: 322  LKMAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPL 501
            +  AQT EGAS+ VE VRFSFMT+E+V +HSV+K+TNPVLLD V+RP PGGLYD  MGPL
Sbjct: 1    MAQAQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPL 60

Query: 502  DDHSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVA 681
            DD + CKSCGQ S  CPGHCGHI+LV P Y+PLLF +L+N L+ TCFFC HF +++ +V 
Sbjct: 61   DDRTSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVE 120

Query: 682  NCVSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXX 861
             CVSQL+LI KG++V A++LD+  T++ +    + +    K+R  D+  D GK++     
Sbjct: 121  RCVSQLKLIMKGNLVAAKQLDSRATDSSEECEDSEME---KERCEDS--DMGKQR----- 170

Query: 862  XXXXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCP 1041
                                               W S QF E   ++N FL+ +  SC 
Sbjct: 171  -----------------------------------WTSLQFAEVTDLMNTFLRLKSKSCG 195

Query: 1042 NCEAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTG 1221
            +C+A  P+++KP FGW  +  +S  A  AN+IRG K +   SS V N N     D +++G
Sbjct: 196  SCKAKPPKLEKPMFGWVRIVGMSASAIGANVIRGIKVKKSASS-VENPN-----DSDDSG 249

Query: 1222 TNSFAAASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCS 1401
             ++ +   DG   S  K   +  V  EF KH+N     L PSEV++++K LWENE   CS
Sbjct: 250  IDALSEVEDG---SEKKKRKSSEVAEEFAKHQNNTRRDLFPSEVKKILKGLWENEHEFCS 306

Query: 1402 FICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSN 1581
            FI D+     +  S+   YSMFFL +ILVPP KFR   KGGD+VMEH  T+ L KVL+SN
Sbjct: 307  FIGDLW----QSESENVDYSMFFLENILVPPTKFRAPTKGGDSVMEHPQTVGLNKVLESN 362

Query: 1582 IALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIFR 1761
            I+L NA TN  ++ +I++RW++LQ+S+NVL+DSKT T + +K+G +GICQ LEKKEG+FR
Sbjct: 363  ISLGNACTNKLDQPKIISRWMNLQESVNVLFDSKTATVKSQKEG-TGICQTLEKKEGLFR 421

Query: 1762 QKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            QKMMGKRVN ACR+VISPDP++AVN+IGIPP FAL+LTYPE
Sbjct: 422  QKMMGKRVNHACRSVISPDPFIAVNDIGIPPCFALKLTYPE 462


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  481 bits (1238), Expect = e-133
 Identities = 260/522 (49%), Positives = 331/522 (63%), Gaps = 3/522 (0%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            M  TTEGA+ +VE V FSF+TD+E+ R S +KIT+P+L+D +  P P GLYDAA+GP DD
Sbjct: 1    MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             S CKSCGQ S HCPGH GHI+LV P YNPL+F +L N+L+ TCF C HFR+  +EV   
Sbjct: 61   KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
             SQLELI KGD++ A+RL++ +     +               D +   G          
Sbjct: 121  TSQLELIMKGDIIRAKRLESIIPGKSVDSF-----------NPDESIHPG---------- 159

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTE---YCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSC 1038
                                DG E   Y  E    +W S QF+EAMSVL K L  +   C
Sbjct: 160  --------------------DGDESQCYSAEQLGENWTSLQFSEAMSVLRKLLTKKHKKC 199

Query: 1039 PNCEAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNT 1218
              C A NP+I KPTFGWFHM  +S D TRA+ IR  + E     + +          + T
Sbjct: 200  QKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSVESETTNDDISLGGG-------DTT 252

Query: 1219 GTNSFAAASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLC 1398
                  +A    RD   K+ L+ ++       +N  SG LLPS+V+ +++ LWENEARLC
Sbjct: 253  DVEDITSAGTAKRDKRKKEKLSYKLA-----EQNKLSGSLLPSQVKGILELLWENEARLC 307

Query: 1399 SFICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQS 1578
            S+I DIQ +      K AG+SMFFL +I VPPIKFRP  KGGD VMEH  T+LL KVLQ 
Sbjct: 308  SYINDIQDQGF---GKKAGHSMFFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQC 364

Query: 1579 NIALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIF 1758
            NI+L +AH N ++ S++++RW+DLQQS+N+L+D+KT +G  K+D ++GICQLLEKKEGIF
Sbjct: 365  NISLGDAHLNKSDPSKVLSRWMDLQQSVNMLFDNKTASG--KRDVATGICQLLEKKEGIF 422

Query: 1759 RQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            RQKMMGKRVNFACR+VISPDPYLAVNEIGIPPYFALRL+YPE
Sbjct: 423  RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPE 464


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score =  480 bits (1236), Expect = e-133
 Identities = 251/515 (48%), Positives = 336/515 (65%), Gaps = 2/515 (0%)
 Frame = +1

Query: 346  GASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDDHSPCKS 525
            GAS+ VE VRFSFMT+++V +HS +K+T+P+LLD V  P PGGLYD  +GP++D   C +
Sbjct: 22   GASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVGEPYPGGLYDPKLGPIEDKKACDT 81

Query: 526  CGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANCVSQLEL 705
            CGQ +  CPGHCGHI+LV P Y+PLLF +L+N L+ TCF C HF +   +V   VSQL+L
Sbjct: 82   CGQLNLACPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFICHHFMAKPYDVERAVSQLKL 141

Query: 706  IAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXXXXXXXX 885
            I KGD+V A++L+++                 K  +SD +C+ G                
Sbjct: 142  IIKGDIVSAKQLESN--------------TPTKSDSSDVSCESG---------------- 171

Query: 886  XXXXXRVSFGTTVYDGTEYCLENN--DRSWDSFQFTEAMSVLNKFLKSRPPSCPNCEAMN 1059
                          D +E C +++  D+ W S QF E  +V+  F++    SC  C+A+N
Sbjct: 172  -----------VTTDSSEGCEDSDMEDQRWTSLQFAEVTAVMKNFMRLSSKSCNRCKAVN 220

Query: 1060 PQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTNSFAA 1239
            PQ++KP FGW  MK +      AN+IRG K +   SS V N      DDF+++G ++ + 
Sbjct: 221  PQLEKPMFGWVRMKAMKGSDIVANVIRGLKLKKSTSS-VENP-----DDFDDSGIDALSE 274

Query: 1240 ASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCSFICDIQ 1419
              DG  D   ++  TE V+ EFE+H N     LLP+EVRE++K LWENE   CSFI D+ 
Sbjct: 275  VEDG--DKETREKSTE-VVKEFEEHNNSSKRDLLPTEVREILKDLWENEHDFCSFIGDLW 331

Query: 1420 LERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSNIALKNA 1599
                +  S+   YSMFFL S+LVPPIKFRP+ KGGD+VMEH  T+ L KVL SNI L NA
Sbjct: 332  ----QSGSEKIDYSMFFLESVLVPPIKFRPSTKGGDSVMEHPQTVGLNKVLGSNIQLGNA 387

Query: 1600 HTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIFRQKMMGK 1779
             TN  ++S+I++RW++LQ+S+NVL+DSKT T Q +++G SGICQLLEKKEG+FRQKMMGK
Sbjct: 388  CTNKLDQSKIISRWMNLQESVNVLFDSKTATVQSQREG-SGICQLLEKKEGLFRQKMMGK 446

Query: 1780 RVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            RVN ACR+VISPDPY+AVN+IGIPP FAL+LTYPE
Sbjct: 447  RVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPE 481


>ref|XP_002308049.1| predicted protein [Populus trichocarpa]
          Length = 1168

 Score =  474 bits (1221), Expect = e-131
 Identities = 258/518 (49%), Positives = 332/518 (64%), Gaps = 4/518 (0%)
 Frame = +1

Query: 343  EGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDDHSPCK 522
            EGA+ +V+ V FSF+TDEEV +HS +KIT+  LLD +D+P PGGLYD AMGPL D  PCK
Sbjct: 5    EGATVSVDSVAFSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGDE-PCK 63

Query: 523  SCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANCVSQLE 702
            +CGQRS +C GHCGHIDL+ P YNPLLF  LH LL+ TCFFCFHFR+   +V   VSQLE
Sbjct: 64   TCGQRSTNCTGHCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQLE 123

Query: 703  LIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXXXXXXX 882
            LI KGDVVGA+RLD S +  E        S+      S  +C                  
Sbjct: 124  LIIKGDVVGAKRLD-SFSPIEA-------SLPEDSDGSSESC------------------ 157

Query: 883  XXXXXXRVSFGTTVYDGTEYCLENNDRS----WDSFQFTEAMSVLNKFLKSRPPSCPNCE 1050
                       +T++ G  +   NN++S    W S Q +EAMS+LN FLK     C NC 
Sbjct: 158  -----------STIHSGARH--PNNEQSKQSEWTSLQLSEAMSILNNFLKLESKKCKNCS 204

Query: 1051 AMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTNS 1230
            A NP I+KPTFGWFH   +S  A R+N+I+ +  E  +         A  +D   + +N 
Sbjct: 205  ASNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTIEGPFGGAFEELIDA--EDATKSPSNK 262

Query: 1231 FAAASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCSFIC 1410
             +A +  +++        +++  +F   K+  S  LLPSE  +++K LW+NEARLCS + 
Sbjct: 263  ESATNRNLKEH-------QKLQHQFTSQKDALSSQLLPSEAMDILKLLWKNEARLCSLMS 315

Query: 1411 DIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSNIAL 1590
            DIQ + +    K AG+SMFFL ++LVPPIKFRP  KGGD+VMEH  ++LL KVL+ N +L
Sbjct: 316  DIQQQGVG--KKKAGHSMFFLNTVLVPPIKFRPPTKGGDSVMEHPLSVLLSKVLELNGSL 373

Query: 1591 KNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIFRQKM 1770
             +AH +  +   I  RWL+LQQS+NVL+DS T  GQ  KD  SGICQ+LEKKEG+FRQKM
Sbjct: 374  ADAHRSN-DFPLIARRWLELQQSLNVLFDSNTAKGQ--KDVISGICQILEKKEGMFRQKM 430

Query: 1771 MGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            MGKRVN+ACR+VISPDPYL VNEIGIPP FA++LTYPE
Sbjct: 431  MGKRVNYACRSVISPDPYLDVNEIGIPPCFAVKLTYPE 468


>gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  469 bits (1208), Expect = e-129
 Identities = 258/520 (49%), Positives = 328/520 (63%), Gaps = 1/520 (0%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            M   TEG + +V+ V FSF+T +E+ R S +KITNP+LL+ +  P  GGLYD A+GPLDD
Sbjct: 1    MVLFTEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDD 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             S CKSCGQ S HCPGH GHI+LV P YNPL+F +L ++L+ TCF C HF +SR+EV   
Sbjct: 61   KSLCKSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMR 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
             SQ ELI KGD++ A+ LD+ +++             N     D +              
Sbjct: 121  TSQFELIMKGDIIRAKSLDSIISDES-----------NHSGDGDES-------------- 155

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                                 G E   EN    W S QF+EAMSVL KFL  +   C NC
Sbjct: 156  --------------------QGVEQLGEN----WSSLQFSEAMSVLRKFLLRKYKKCQNC 191

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWED-DFNNTGT 1224
              +NP+I KPTFGWFHM  +S D  RAN +R  + E     + +      E+ D  +TGT
Sbjct: 192  GVVNPRISKPTFGWFHMNVLSDDEARANTMRALESETINDDMSLGGGETTEEEDITSTGT 251

Query: 1225 NSFAAASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCSF 1404
                      RD   K  L+ ++  +     N  SG LLPS+V+ +++ LWENEARLCS+
Sbjct: 252  AK--------RDKRKKGKLSSKLAAQ-----NKLSGSLLPSQVKGILELLWENEARLCSY 298

Query: 1405 ICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSNI 1584
            I DIQ +      K AG+SMFFL +I VPPIKFRP  KGGD VMEH  T+LL KVLQ NI
Sbjct: 299  ISDIQDQGF---GKKAGHSMFFLENIFVPPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNI 355

Query: 1585 ALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIFRQ 1764
            +L +AH N  + S++++RW+DLQQS+N+L+D+KT +GQG+   ++GICQLLEKKEGIFRQ
Sbjct: 356  SLGDAHINKLDPSKVLSRWMDLQQSVNLLFDNKT-SGQGEV--AAGICQLLEKKEGIFRQ 412

Query: 1765 KMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            KMMGKRVNFACR+VISPDPYLAVNEIGIPPYFALRL+YPE
Sbjct: 413  KMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPE 452


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score =  466 bits (1199), Expect = e-128
 Identities = 256/522 (49%), Positives = 327/522 (62%), Gaps = 3/522 (0%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            MA  TEGA+ +V+ V FSF+TDEE+ + S +KITNP+LLD +  P  GGLYD A+GP  +
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             SPC+SCGQ S+HCPGH GHI+LV PAYNPL+F ML N+L+ TCF C HF++SR+EV   
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELR 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
             +QLELI KG++  A+ LD                  N   ++D  CD            
Sbjct: 121  ANQLELIMKGNIAKAKNLDEI----------------NLDESADL-CDGD---------- 153

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                                D      E    +W S QF+EAMSVL KFLK     C NC
Sbjct: 154  --------------------DSQCSSAEQLGENWTSLQFSEAMSVLRKFLKKEYRKCQNC 193

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDF---NNT 1218
              +NP+I  PTFGWFH+K +S    RAN+I G          V  A+    DD    N  
Sbjct: 194  GYINPKITIPTFGWFHVKALSAAQARANVISGND--------VSLASEIIHDDISLGNGD 245

Query: 1219 GTNSFAAASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLC 1398
             T+     S  I +S+AK    E+ +       +  +G LLPS+V+ +++ LWEN+ARLC
Sbjct: 246  TTDVEDITSGDIANSNAKRHNKEKQI-----SSHTLAGSLLPSQVQRILELLWENDARLC 300

Query: 1399 SFICDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQS 1578
             +I DIQ   +    K AG+SMFFL +I VPPIKFRP  KG D V EHA T+LL +VL+S
Sbjct: 301  LYISDIQGLGI---GKKAGHSMFFLENIYVPPIKFRPPTKGDDKVSEHAQTVLLTRVLES 357

Query: 1579 NIALKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIF 1758
            NI+L  AH N ++ S ++ RW+DLQ+S+N+L+D+KT +G+ +KD  +GICQLLEKKEGIF
Sbjct: 358  NISLGQAHLNKSDASVVLRRWMDLQRSVNLLFDNKTASGESQKDLVTGICQLLEKKEGIF 417

Query: 1759 RQKMMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            RQKMMGKRVN+ACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 418  RQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPE 459


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score =  464 bits (1194), Expect = e-128
 Identities = 255/519 (49%), Positives = 327/519 (63%)
 Frame = +1

Query: 328  MAQTTEGASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDD 507
            MA  TEGA+ +V+ V FSF+TDEE+ + S +KITNP+LLD +  P  GGLYD A+GP  +
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 508  HSPCKSCGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANC 687
             SPC+SCGQ S+HCPGH GHI+LV P YNPL+F ML N+L+ TCF C HF++SR EV   
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELR 120

Query: 688  VSQLELIAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXX 867
             +QLELI KG++  A+ LDA   +   +     LS  N     D+ C             
Sbjct: 121  ANQLELIMKGNIAKAKNLDAINLDESAD-----LSDGN-----DSQCSSD---------- 160

Query: 868  XXXXXXXXXXXRVSFGTTVYDGTEYCLENNDRSWDSFQFTEAMSVLNKFLKSRPPSCPNC 1047
                                       E    +W S QF+EAMSVL KFLK     C NC
Sbjct: 161  ---------------------------EQLGENWTSLQFSEAMSVLRKFLKKEFRKCQNC 193

Query: 1048 EAMNPQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTN 1227
              +NP+I KPTFGWFH+K +S    RAN+I G   +   +S +++ + +      N  T 
Sbjct: 194  GNINPKITKPTFGWFHVKALSAAQARANVISG--IDASLASEIIHDDIS----LGNGDTT 247

Query: 1228 SFAAASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCSFI 1407
                 + G  D++  +   +  L    K     SG LLPS+V+ +++ LWENEARLC +I
Sbjct: 248  DVEDITSG--DTANSNAKRQNKLARHNK----LSGSLLPSQVQGILELLWENEARLCLYI 301

Query: 1408 CDIQLERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSNIA 1587
             DIQ +      K AG+SMFFL +I VPPIKFRP  KG D V EHA T+LL +VL+SNI+
Sbjct: 302  SDIQGQGF---GKKAGHSMFFLDNIYVPPIKFRPPTKGDDKVSEHAQTVLLTRVLESNIS 358

Query: 1588 LKNAHTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIFRQK 1767
            L  AH N ++ S ++ RW+DLQ+S+N+L+D+KT +GQ  KD  +GICQLLEKKEGIFRQK
Sbjct: 359  LGQAHLNKSDASVVLRRWMDLQRSVNLLFDNKTASGQ--KDLVTGICQLLEKKEGIFRQK 416

Query: 1768 MMGKRVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            MMGKRVN+ACR+VISPDPYLAVNEIGIPPYFALRLTYPE
Sbjct: 417  MMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPE 455


>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
            gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
            190K chain-like protein [Arabidopsis thaliana]
            gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
            [Arabidopsis thaliana]
          Length = 1670

 Score =  463 bits (1191), Expect = e-127
 Identities = 247/515 (47%), Positives = 328/515 (63%), Gaps = 2/515 (0%)
 Frame = +1

Query: 346  GASEAVEKVRFSFMTDEEVWRHSVIKITNPVLLDGVDRPTPGGLYDAAMGPLDDHSPCKS 525
            GAS+ VE VRFSFMT+++V +HS +K+T+P+L D V  P PGGLYD  +GP DD   C S
Sbjct: 22   GASQVVESVRFSFMTEQDVRKHSFLKVTSPILHDNVGNPFPGGLYDLKLGPKDDKQACNS 81

Query: 526  CGQRSFHCPGHCGHIDLVLPAYNPLLFGMLHNLLKSTCFFCFHFRSSREEVANCVSQLEL 705
            CGQ    CPGHCGHI+LV P Y+PLLF +L N L+  CFFC HF +  E+V   VSQL+L
Sbjct: 82   CGQLKLACPGHCGHIELVFPIYHPLLFNLLFNFLQRACFFCHHFMAKPEDVERAVSQLKL 141

Query: 706  IAKGDVVGARRLDASLTETEKNKVWNALSVKNKKRTSDAACDKGKKKRDXXXXXXXXXXX 885
            I KGD+V A++L+++                 K ++SD +C+                  
Sbjct: 142  IIKGDIVSAKQLESN--------------TPTKSKSSDESCE------------------ 169

Query: 886  XXXXXRVSFGTTVYDGTEYCLENN--DRSWDSFQFTEAMSVLNKFLKSRPPSCPNCEAMN 1059
                   S  TT  D +E C +++  D+ W S QF E  +VL  F++    SC  C+ +N
Sbjct: 170  -------SVVTT--DSSEECEDSDVEDQRWTSLQFAEVTAVLKNFMRLSSKSCSRCKGIN 220

Query: 1060 PQIKKPTFGWFHMKNVSTDATRANIIRGRKFEDQYSSLVVNANSAWEDDFNNTGTNSFAA 1239
            P+++KP FGW  M+ +      AN+IRG K +   SS V N      D F+++G ++ + 
Sbjct: 221  PKLEKPMFGWVRMRAMKDSDVGANVIRGLKLKKSTSS-VENP-----DGFDDSGIDALSE 274

Query: 1240 ASDGIRDSSAKDPLTERVLLEFEKHKNFFSGPLLPSEVREVMKHLWENEARLCSFICDIQ 1419
              DG  D   ++  TE V  EFE+H +     LLPSEVR ++KHLW+NE   CSFI D+ 
Sbjct: 275  VEDG--DKETREKSTE-VAAEFEEHNS--KRDLLPSEVRNILKHLWQNEHEFCSFIGDLW 329

Query: 1420 LERLRMPSKTAGYSMFFLGSILVPPIKFRPAAKGGDAVMEHAHTLLLGKVLQSNIALKNA 1599
                +  S+   YSMFFL S+LVPP KFRP   GGD+VMEH  T+ L KV++SN  L NA
Sbjct: 330  ----QSGSEKIDYSMFFLESVLVPPTKFRPPTTGGDSVMEHPQTVGLNKVIESNNILGNA 385

Query: 1600 HTNTAERSRIVNRWLDLQQSINVLYDSKTMTGQGKKDGSSGICQLLEKKEGIFRQKMMGK 1779
             TN  ++S+++ RW +LQ+S+NVL+DSKT T Q ++D SSGICQLLEKKEG+FRQKMMGK
Sbjct: 386  CTNKLDQSKVIFRWRNLQESVNVLFDSKTATVQSQRD-SSGICQLLEKKEGLFRQKMMGK 444

Query: 1780 RVNFACRTVISPDPYLAVNEIGIPPYFALRLTYPE 1884
            RVN ACR+VISPDPY+AVN+IGIPP FAL+LTYPE
Sbjct: 445  RVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPE 479