BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00007206
         (3505 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO73527.1| gag-pol polyprotein [Glycine max]                      420   0.0  
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      420   0.0  
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                      420   0.0  
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      419   0.0  
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni...   461   0.0  
emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]         460   0.0  
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s...   460   0.0  
gb|ABF93543.1| retrotransposon protein, putative, unclassified [...   460   0.0  
gb|ABF94836.1| retrotransposon protein, putative, unclassified [...   460   0.0  
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                      411   0.0  
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                      410   0.0  
emb|CAN65521.1| hypothetical protein VITISV_025368 [Vitis vinifera]   380   0.0  
gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]     459   0.0  
ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309...   424   0.0  
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   472   0.0  
gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera...   467   e-177
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    471   e-176
gb|ABF67934.1| Opie3 pol polyprotein [Zea mays]                       474   e-176
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                471   e-175
gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]           476   e-175

>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  420 bits (1079), Expect(4) = 0.0
 Identities = 209/390 (53%), Positives = 280/390 (71%)
 Frame = -3

Query: 2063 YLKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDK 1884
            YL EEVY+EQP GF     P+HV++L KALYGLKQAPRA YERL++FL +  + +G +DK
Sbjct: 1185 YLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDK 1244

Query: 1883 TLFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQ 1704
            TLF K  +EN++I Q+YVDDI+F    + + + F   MQ EFE S++GEL +FLGLQ+KQ
Sbjct: 1245 TLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQ 1304

Query: 1703 LKDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLL 1524
            ++D I ++Q++Y K ++KKF MENA   +TP  T +KL KDE G +V+  LYR MIGSLL
Sbjct: 1305 MEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLL 1364

Query: 1523 YLTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYS 1344
            YLTASRPDI ++V +CAR+QANPK SHL  VKRIL+Y+ GT +  + Y   ++  LVGY 
Sbjct: 1365 YLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYC 1424

Query: 1343 DADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKH 1164
            DAD+AGS  DRKSTSG C +LG+ L+SW+SKKQ  VSLSTAEAEYI+AGS  +Q++W+K 
Sbjct: 1425 DADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1484

Query: 1163 QLEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPT 984
             L+++ +    + ++CDN SAIN++KNPVQHSRTK            V+  VI L  V T
Sbjct: 1485 MLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDT 1544

Query: 983  EKQLADIFIKPLSEESFCRIRMELGLMSLK 894
            E+Q+ADIF K L    F ++R +LG+  L+
Sbjct: 1545 EEQIADIFTKALDANQFEKLRGKLGICLLE 1574



 Score =  203 bits (517), Expect(4) = 0.0
 Identities = 101/187 (54%), Positives = 126/187 (67%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            CQ+GKQ + S +  R  +TSR LE+LH DL GP+ + SLGGK Y +V+VD +SRFT   F
Sbjct: 730  CQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNF 789

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            + +K E F  F  L  R+Q +K   +  IRSDHGREFEN  F EFC  +GI H FSA  T
Sbjct: 790  IREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSAAIT 849

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNG+VERKNRTLQE AR ML   +LP    AEA+NTACYI NR  ++     T Y++W
Sbjct: 850  PQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIW 909

Query: 2960 KGRKPTL 2940
            KGRKP++
Sbjct: 910  KGRKPSV 916



 Score =  128 bits (321), Expect(4) = 0.0
 Identities = 83/241 (34%), Positives = 124/241 (51%)
 Frame = -2

Query: 2967 VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLV 2788
            + + +K ++ +F IFG  C+              K++ GIFLGYS+  +AYRVFN RT  
Sbjct: 908  IWKGRKPSVKHFHIFGSPCYILADREQRRKMDP-KSDAGIFLGYSTNSRAYRVFNSRTRT 966

Query: 2787 VEESIYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEPQGENAEQNIADQGESQ 2608
            V ESI V   +                       +K+ E +    G+N   + A  GE+ 
Sbjct: 967  VMESINVVVDDLSPAR------------------KKDVEEDVRTLGDNVA-DAAKSGENA 1007

Query: 2607 ANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGNVAFI 2428
             N+  A     +N   K  S        K H KE ++ +P+  + TRS   ++V N  F+
Sbjct: 1008 ENSDSATDESNINQPDKRSST----RIQKMHPKELIIGDPNRGVTTRSREVEIVSNSCFV 1063

Query: 2427 SQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIG 2248
            S+I+PK  +EA  +E  + AMQEEL QF+RN V +LVPRP+  +VIGTKW+F+NK  + G
Sbjct: 1064 SKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEG 1123

Query: 2247 M 2245
            +
Sbjct: 1124 V 1124



 Score = 76.3 bits (186), Expect(4) = 0.0
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = -1

Query: 2245 VVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            + RNKARLVAQGY+Q EG+DF ETFAP+ARLE+IR+L   A    F LYQMDVKS
Sbjct: 1125 ITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKS 1179


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  420 bits (1079), Expect(4) = 0.0
 Identities = 209/390 (53%), Positives = 280/390 (71%)
 Frame = -3

Query: 2063 YLKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDK 1884
            YL EEVY+EQP GF     P+HV++L KALYGLKQAPRA YERL++FL +  + +G +DK
Sbjct: 1183 YLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDK 1242

Query: 1883 TLFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQ 1704
            TLF K  +EN++I Q+YVDDI+F    + + + F   MQ EFE S++GEL +FLGLQ+KQ
Sbjct: 1243 TLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQ 1302

Query: 1703 LKDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLL 1524
            ++D I ++Q++Y K ++KKF MENA   +TP  T +KL KDE G +V+  LYR MIGSLL
Sbjct: 1303 MEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLL 1362

Query: 1523 YLTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYS 1344
            YLTASRPDI ++V +CAR+QANPK SHL  VKRIL+Y+ GT +  + Y   ++  LVGY 
Sbjct: 1363 YLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYC 1422

Query: 1343 DADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKH 1164
            DAD+AGS  DRKSTSG C +LG+ L+SW+SKKQ  VSLSTAEAEYI+AGS  +Q++W+K 
Sbjct: 1423 DADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1482

Query: 1163 QLEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPT 984
             L+++ +    + ++CDN SAIN++KNPVQHSRTK            V+  VI L  V T
Sbjct: 1483 MLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDT 1542

Query: 983  EKQLADIFIKPLSEESFCRIRMELGLMSLK 894
            E+Q+ADIF K L    F ++R +LG+  L+
Sbjct: 1543 EEQIADIFTKALDANQFEKLRGKLGICLLE 1572



 Score =  200 bits (508), Expect(4) = 0.0
 Identities = 99/187 (52%), Positives = 125/187 (66%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            CQ+GKQ + S +  +  +TSR LE+LH DL GP+ + SLGGK Y +V+VD +SRFT   F
Sbjct: 728  CQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVKF 787

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            + +K E F  F  L  R+Q +K   +  IRSDHGREFEN    EFC  +GI H FSA  T
Sbjct: 788  IREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEFCTSEGITHEFSAAIT 847

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNG+VERKNRTLQE AR ML   +LP    AEA+NTACYI NR  ++     T Y++W
Sbjct: 848  PQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIW 907

Query: 2960 KGRKPTL 2940
            KGRKP++
Sbjct: 908  KGRKPSV 914



 Score =  129 bits (323), Expect(4) = 0.0
 Identities = 83/241 (34%), Positives = 124/241 (51%)
 Frame = -2

Query: 2967 VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLV 2788
            + + +K ++ +F IFG  C+              K++ GIFLGYS+  +AYRVFN RT  
Sbjct: 906  IWKGRKPSVKHFHIFGSPCYILADREQRRKMDP-KSDAGIFLGYSTNSRAYRVFNSRTRT 964

Query: 2787 VEESIYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEPQGENAEQNIADQGESQ 2608
            V ESI V   +                       +K+ E +    G+N   + A  GE+ 
Sbjct: 965  VMESINVVVDDLSPAR------------------KKDVEEDVRTSGDNVA-DAAKSGENA 1005

Query: 2607 ANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGNVAFI 2428
             N+  A     +N   K  S        K H KE ++ +P+  + TRS   ++V N  F+
Sbjct: 1006 ENSDSATDESNINQPDKRSST----RIQKMHPKELIIGDPNRGVTTRSREVEIVSNSCFV 1061

Query: 2427 SQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIG 2248
            S+I+PK  +EA  +E  + AMQEEL QF+RN V +LVPRP+  +VIGTKW+F+NK  + G
Sbjct: 1062 SKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEG 1121

Query: 2247 M 2245
            +
Sbjct: 1122 V 1122



 Score = 76.3 bits (186), Expect(4) = 0.0
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = -1

Query: 2245 VVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            + RNKARLVAQGY+Q EG+DF ETFAP+ARLE+IR+L   A    F LYQMDVKS
Sbjct: 1123 ITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKS 1177


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  420 bits (1080), Expect(4) = 0.0
 Identities = 210/390 (53%), Positives = 280/390 (71%)
 Frame = -3

Query: 2063 YLKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDK 1884
            YL EEVY+EQP GF     P+HV++L KALYGLKQAPRA YERL++FL +  + +G +DK
Sbjct: 1185 YLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDK 1244

Query: 1883 TLFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQ 1704
            TLF K  +EN++I Q+YVDDI+F    + + + F   MQ EFE S++GEL +FLGLQ+KQ
Sbjct: 1245 TLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQ 1304

Query: 1703 LKDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLL 1524
            ++D I ++Q++Y K ++KKF MENA   +TP  T +KL KDE G +V+ K YR MIGSLL
Sbjct: 1305 MEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQKPYRSMIGSLL 1364

Query: 1523 YLTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYS 1344
            YLTASRPDI ++V +CAR+QANPK SHL  VKRIL+Y+ GT +  + Y   +S  LVGY 
Sbjct: 1365 YLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYC 1424

Query: 1343 DADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKH 1164
            DAD+AGS  DRKSTSG C +LG+ L+SW+SKKQ  VSLSTAEAEYI+AGS  +Q++W+K 
Sbjct: 1425 DADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1484

Query: 1163 QLEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPT 984
             L+++ +    + ++CDN SAIN++KNPVQHSRTK            V+  VI L  V T
Sbjct: 1485 MLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDT 1544

Query: 983  EKQLADIFIKPLSEESFCRIRMELGLMSLK 894
            E+Q+ADIF K L    F ++R +LG+  L+
Sbjct: 1545 EEQIADIFTKALDANQFEKLRGKLGICVLE 1574



 Score =  199 bits (506), Expect(4) = 0.0
 Identities = 99/187 (52%), Positives = 125/187 (66%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            CQ+GKQ + S +  +  +TSR LE+LH DL GP+ + SLGGK Y +V+VD +SRFT   F
Sbjct: 730  CQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNF 789

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            + +K   F  F  L  R+Q +K   +  IRSDHGREFEN  F EFC  +GI H FSA  T
Sbjct: 790  IREKSGTFEVFKKLSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSAAIT 849

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNG+VERKNRTLQE AR ML   +LP    AEA+NTACYI NR  ++     T Y++W
Sbjct: 850  PQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIW 909

Query: 2960 KGRKPTL 2940
            KGRKP++
Sbjct: 910  KGRKPSV 916



 Score =  129 bits (323), Expect(4) = 0.0
 Identities = 83/241 (34%), Positives = 124/241 (51%)
 Frame = -2

Query: 2967 VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLV 2788
            + + +K ++ +F IFG  C+              K++ GIFLGYS+  +AYRVFN RT  
Sbjct: 908  IWKGRKPSVKHFHIFGSPCYILADREQRRKMDP-KSDAGIFLGYSTNSRAYRVFNSRTRT 966

Query: 2787 VEESIYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEPQGENAEQNIADQGESQ 2608
            V ESI V   +                       +K+ E +    G+N   + A  GE+ 
Sbjct: 967  VMESINVVVDDLSPAR------------------KKDVEEDVRTSGDNVA-DAAKSGENA 1007

Query: 2607 ANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGNVAFI 2428
             N+  A     +N   K  S        K H KE ++ +P+  + TRS   ++V N  F+
Sbjct: 1008 ENSDSATDESNINQPDKRSST----RIQKMHPKELIIGDPNRGVTTRSREVEIVSNSCFV 1063

Query: 2427 SQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIG 2248
            S+I+PK  +EA  +E  + AMQEEL QF+RN V +LVPRP+  +VIGTKW+F+NK  + G
Sbjct: 1064 SKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEG 1123

Query: 2247 M 2245
            +
Sbjct: 1124 V 1124



 Score = 76.3 bits (186), Expect(4) = 0.0
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = -1

Query: 2245 VVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            + RNKARLVAQGY+Q EG+DF ETFAP+ARLE+IR+L   A    F LYQMDVKS
Sbjct: 1125 ITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKS 1179


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  419 bits (1077), Expect(4) = 0.0
 Identities = 209/390 (53%), Positives = 279/390 (71%)
 Frame = -3

Query: 2063 YLKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDK 1884
            YL EE Y+EQP GF     P+HV++L KALYGLKQAPRA YERL++FL +  + +G +DK
Sbjct: 1186 YLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDK 1245

Query: 1883 TLFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQ 1704
            TLF K  +EN++I Q+YVDDI+F    + + + F   MQ EFE S++GEL +FLGLQ+KQ
Sbjct: 1246 TLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQ 1305

Query: 1703 LKDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLL 1524
            ++D I ++Q+KY K ++KKF MENA   +TP  T +KL KDE G +V+  LYR MIGSLL
Sbjct: 1306 MEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLL 1365

Query: 1523 YLTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYS 1344
            YLTASRPDI ++V +CAR+QANPK SHL  VKRIL+Y+ GT +  + Y   +   LVGY 
Sbjct: 1366 YLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYC 1425

Query: 1343 DADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKH 1164
            DAD+AGS  DRKSTSG C +LG+ L+SW+SKKQ  VSLSTAEAEYI+AGS  +Q++W+K 
Sbjct: 1426 DADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1485

Query: 1163 QLEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPT 984
             L+++ +    + ++CDN SAIN++KNPVQHSRTK            V+  VI L  V T
Sbjct: 1486 MLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRELVDDKVITLEHVDT 1545

Query: 983  EKQLADIFIKPLSEESFCRIRMELGLMSLK 894
            E+Q+ADIF K L  + F ++R +LG+  L+
Sbjct: 1546 EEQIADIFTKALDAKQFEKLRGKLGICLLE 1575



 Score =  202 bits (514), Expect(4) = 0.0
 Identities = 100/187 (53%), Positives = 126/187 (67%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            CQ+GKQ + S +  +  +TSR LE+LH DL GP+ + SLGGK Y +V+VD +SRFT   F
Sbjct: 731  CQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNF 790

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            + +K + F  F  L  R+Q +K   +  IRSDHGREFEN  F EFC  +GI H FSA  T
Sbjct: 791  IREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAIT 850

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNG+VERKNRTLQE AR ML   +LP    AEA+NTACYI NR  ++     T Y++W
Sbjct: 851  PQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIW 910

Query: 2960 KGRKPTL 2940
            KGRKPT+
Sbjct: 911  KGRKPTV 917



 Score =  126 bits (317), Expect(4) = 0.0
 Identities = 82/241 (34%), Positives = 122/241 (50%)
 Frame = -2

Query: 2967 VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLV 2788
            + + +K  + +F IFG  C+              K++ GIFLGYS+  +AYRVFN RT  
Sbjct: 909  IWKGRKPTVKHFHIFGSPCYILADREQRRKMDP-KSDAGIFLGYSTNSRAYRVFNSRTRT 967

Query: 2787 VEESIYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEPQGENAEQNIADQGESQ 2608
            V ESI V   +                       +K+ E +    G+N     A   E+ 
Sbjct: 968  VMESINVVVDDLTPAR------------------KKDVEEDVRTSGDNVADT-AKSAENA 1008

Query: 2607 ANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGNVAFI 2428
             N+  A     +N   K  S+       K H KE ++ +P+  + TRS   ++V N  F+
Sbjct: 1009 ENSDSATDEPNINQPDKRPSI----RIQKMHPKELIIGDPNRGVTTRSREIEIVSNSCFV 1064

Query: 2427 SQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIG 2248
            S+I+PK  +EA  +E  + AMQEEL QF+RN V +LVPRP+  +VIGTKW+F+NK  + G
Sbjct: 1065 SKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEG 1124

Query: 2247 M 2245
            +
Sbjct: 1125 V 1125



 Score = 76.3 bits (186), Expect(4) = 0.0
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = -1

Query: 2245 VVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            + RNKARLVAQGY+Q EG+DF ETFAP+ARLE+IR+L   A    F LYQMDVKS
Sbjct: 1126 ITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKS 1180


>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108712101|gb|ABF99896.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1969

 Score =  461 bits (1186), Expect(4) = 0.0
 Identities = 233/388 (60%), Positives = 285/388 (73%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            ++EEVY++QP GFE  + PNHVFKL KALYGLKQAPRA YERL  FLL+N F  G VDKT
Sbjct: 1404 IEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKT 1463

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFT     + L+VQ+YVDDIIF  +  +L   F+ +M  EFE SMMGEL FFLGLQIKQ 
Sbjct: 1464 LFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQT 1523

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            K+GI ++Q KY+KELLKKF M + KP  TPM+TT  L  DE G+ V+ + YR MIGSLLY
Sbjct: 1524 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLY 1583

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            LTASRPDIHFSVCLCARFQA+P+ SH  AVKRI RY+  T E  +WY   ++  +  +SD
Sbjct: 1584 LTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFSD 1643

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            ADFAG ++DRKSTSGTC FLG +LVSW S+KQ+SV+ STAEAEY++A S  +QVLW+   
Sbjct: 1644 ADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMIST 1703

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L+D+GL + G+P+ CDNTSAIN+ KNPVQHSRTK           +VE G I L FV +E
Sbjct: 1704 LKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESE 1763

Query: 980  KQLADIFIKPLSEESFCRIRMELGLMSL 897
            KQLADIF KPL    F  +R ELG++ +
Sbjct: 1764 KQLADIFTKPLDRSRFEFLRSELGVIGV 1791



 Score =  177 bits (449), Expect(4) = 0.0
 Identities = 89/191 (46%), Positives = 122/191 (63%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            C+ GK T +S K    V T    ++LH D  GP  + S+GGK YV V+VD +SR++   F
Sbjct: 924  CRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYF 983

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            L  K+E F +F +L + +  +   +L AIRSD+G EF+N  FE FC+  G+ H FS+P  
Sbjct: 984  LESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYV 1043

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNGVVERKNRTL EMARTML +   P+ F  EA++ AC+I NR  +++ L KTPY+L 
Sbjct: 1044 PQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELR 1103

Query: 2960 KGRKPTLDTSR 2928
             GR+P +   R
Sbjct: 1104 FGRRPKVSHLR 1114



 Score = 97.4 bits (241), Expect(4) = 0.0
 Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
 Frame = -2

Query: 2955 KKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLVVEES 2776
            ++  + + ++FGCKCF             +++ +GIFLGY++  +AYRV+   T  + E+
Sbjct: 1106 RRPKVSHLRVFGCKCFVLKSGNLDKFE--SRSLDGIFLGYATHSRAYRVYVLSTNKIVET 1163

Query: 2775 IYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEP--------QGENAEQNIADQ 2620
              VTF E+   A            + ++  + +++ +  P        Q   +    +  
Sbjct: 1164 CEVTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSPSTTSPS 1223

Query: 2619 GESQANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGN 2440
            G++   +S A   EE++      + P+       H  ++++    E++ TR+   ++V N
Sbjct: 1224 GDAPTTSSSAA--EEIDGGTSGPTAPRH--IQNRHPPDSMIGGLGERV-TRNRSYELV-N 1277

Query: 2439 VAFISQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKL 2260
             AF++  +PK    A  +EN + AM EEL  FERN V  LV  P   +VIGTKWVF+NKL
Sbjct: 1278 SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKL 1337

Query: 2259 KKIG 2248
             + G
Sbjct: 1338 GEDG 1341



 Score = 84.7 bits (208), Expect(4) = 0.0
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+ ++VRNKARLVAQG++Q EGLDF ETFAP+ARLEAIR+L  FA  K F L+QMDVKS
Sbjct: 1339 EDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKS 1397


>emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]
          Length = 2256

 Score =  460 bits (1183), Expect(4) = 0.0
 Identities = 232/388 (59%), Positives = 285/388 (73%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            ++EEVY++QP GFE  + PNHVFKL KALYGLKQAPRA YERL  FLL+N F  G VDKT
Sbjct: 1383 IEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKT 1442

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFT     + L+VQ+YVDDIIF  +  +L   F+ +M  EFE SMMGEL FFLGLQIKQ 
Sbjct: 1443 LFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQT 1502

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            K+GI ++Q KY+KELLKKF M + KP  TPM+TT  L  DE G+ V+ + YR MIGSLLY
Sbjct: 1503 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLY 1562

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            LTASRPDIHFSVCLCARFQA+P+ SH  AVKR+ RY+  T E  +WY   ++  +  +SD
Sbjct: 1563 LTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSD 1622

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            ADFAG ++DRKSTSGTC FLG +LVSW S+KQ+SV+ STAEAEY++A S  +QVLW+   
Sbjct: 1623 ADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMIST 1682

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L+D+GL + G+P+ CDNTSAIN+ KNPVQHSRTK           +VE G I L FV +E
Sbjct: 1683 LKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESE 1742

Query: 980  KQLADIFIKPLSEESFCRIRMELGLMSL 897
            KQLADIF KPL    F  +R ELG++ +
Sbjct: 1743 KQLADIFTKPLDRSRFEFLRSELGVIGV 1770



 Score =  177 bits (449), Expect(4) = 0.0
 Identities = 89/191 (46%), Positives = 122/191 (63%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            C+ GK T +S K    V T    ++LH D  GP  + S+GGK YV V+VD +SR++   F
Sbjct: 903  CRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYF 962

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            L  K+E F +F +L + +  +   +L AIRSD+G EF+N  FE FC+  G+ H FS+P  
Sbjct: 963  LESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYV 1022

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNGVVERKNRTL EMARTML +   P+ F  EA++ AC+I NR  +++ L KTPY+L 
Sbjct: 1023 PQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELR 1082

Query: 2960 KGRKPTLDTSR 2928
             GR+P +   R
Sbjct: 1083 FGRRPKVSHLR 1093



 Score = 97.4 bits (241), Expect(4) = 0.0
 Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
 Frame = -2

Query: 2955 KKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLVVEES 2776
            ++  + + ++FGCKCF             +++ +GIFLGY++  +AYRV+   T  + E+
Sbjct: 1085 RRPKVSHLRVFGCKCFVLKSGNLDKFE--SRSLDGIFLGYATHSRAYRVYVLSTNKIVET 1142

Query: 2775 IYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEP--------QGENAEQNIADQ 2620
              VTF E+   A            + ++  + +++ +  P        Q   +    +  
Sbjct: 1143 CEVTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSPSTTSPS 1202

Query: 2619 GESQANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGN 2440
            G++   +S A   EE++      + P+       H  ++++    E++ TR+   ++V N
Sbjct: 1203 GDAPTTSSSAA--EEIDGGTSGPTAPRH--IQNRHPPDSMIGGLGERV-TRNRSYELV-N 1256

Query: 2439 VAFISQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKL 2260
             AF++  +PK    A  +EN + AM EEL  FERN V  LV  P   +VIGTKWVF+NKL
Sbjct: 1257 SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKL 1316

Query: 2259 KKIG 2248
             + G
Sbjct: 1317 GEDG 1320



 Score = 84.7 bits (208), Expect(4) = 0.0
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+ ++VRNKARLVAQG++Q EGLDF ETFAP+ARLEAIR+L  FA  K F L+QMDVKS
Sbjct: 1318 EDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKS 1376


>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
            Group]
          Length = 2145

 Score =  460 bits (1183), Expect(4) = 0.0
 Identities = 232/388 (59%), Positives = 285/388 (73%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            ++EEVY++QP GFE  + PNHVFKL KALYGLKQAPRA YERL  FLL+N F  G VDKT
Sbjct: 1404 IEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKT 1463

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFT     + L+VQ+YVDDIIF  +  +L   F+ +M  EFE SMMGEL FFLGLQIKQ 
Sbjct: 1464 LFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQT 1523

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            K+GI ++Q KY+KELLKKF M + KP  TPM+TT  L  DE G+ V+ + YR MIGSLLY
Sbjct: 1524 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLY 1583

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            LTASRPDIHFSVCLCARFQA+P+ SH  AVKR+ RY+  T E  +WY   ++  +  +SD
Sbjct: 1584 LTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSD 1643

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            ADFAG ++DRKSTSGTC FLG +LVSW S+KQ+SV+ STAEAEY++A S  +QVLW+   
Sbjct: 1644 ADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMIST 1703

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L+D+GL + G+P+ CDNTSAIN+ KNPVQHSRTK           +VE G I L FV +E
Sbjct: 1704 LKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESE 1763

Query: 980  KQLADIFIKPLSEESFCRIRMELGLMSL 897
            KQLADIF KPL    F  +R ELG++ +
Sbjct: 1764 KQLADIFTKPLDRSRFEFLRSELGVIGV 1791



 Score =  177 bits (449), Expect(4) = 0.0
 Identities = 89/191 (46%), Positives = 122/191 (63%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            C+ GK T +S K    V T    ++LH D  GP  + S+GGK YV V+VD +SR++   F
Sbjct: 924  CRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYF 983

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            L  K+E F +F +L + +  +   +L AIRSD+G EF+N  FE FC+  G+ H FS+P  
Sbjct: 984  LESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYV 1043

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNGVVERKNRTL EMARTML +   P+ F  EA++ AC+I NR  +++ L KTPY+L 
Sbjct: 1044 PQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELR 1103

Query: 2960 KGRKPTLDTSR 2928
             GR+P +   R
Sbjct: 1104 FGRRPKVSHLR 1114



 Score = 97.4 bits (241), Expect(4) = 0.0
 Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
 Frame = -2

Query: 2955 KKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLVVEES 2776
            ++  + + ++FGCKCF             +++ +GIFLGY++  +AYRV+   T  + E+
Sbjct: 1106 RRPKVSHLRVFGCKCFVLKSGNLDKFE--SRSLDGIFLGYATHSRAYRVYVLSTNKIVET 1163

Query: 2775 IYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEP--------QGENAEQNIADQ 2620
              VTF E+   A            + ++  + +++ +  P        Q   +    +  
Sbjct: 1164 CEVTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSPSTTSPS 1223

Query: 2619 GESQANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGN 2440
            G++   +S A   EE++      + P+       H  ++++    E++ TR+   ++V N
Sbjct: 1224 GDAPTTSSSAA--EEIDGGTSGPTAPRH--IQNRHPPDSMIGGLGERV-TRNRSYELV-N 1277

Query: 2439 VAFISQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKL 2260
             AF++  +PK    A  +EN + AM EEL  FERN V  LV  P   +VIGTKWVF+NKL
Sbjct: 1278 SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKL 1337

Query: 2259 KKIG 2248
             + G
Sbjct: 1338 GEDG 1341



 Score = 84.7 bits (208), Expect(4) = 0.0
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+ ++VRNKARLVAQG++Q EGLDF ETFAP+ARLEAIR+L  FA  K F L+QMDVKS
Sbjct: 1339 EDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKS 1397


>gb|ABF93543.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2124

 Score =  460 bits (1183), Expect(4) = 0.0
 Identities = 232/388 (59%), Positives = 285/388 (73%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            ++EEVY++QP GFE  + PNHVFKL KALYGLKQAPRA YERL  FLL+N F  G VDKT
Sbjct: 1383 IEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKT 1442

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFT     + L+VQ+YVDDIIF  +  +L   F+ +M  EFE SMMGEL FFLGLQIKQ 
Sbjct: 1443 LFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQT 1502

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            K+GI ++Q KY+KELLKKF M + KP  TPM+TT  L  DE G+ V+ + YR MIGSLLY
Sbjct: 1503 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLY 1562

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            LTASRPDIHFSVCLCARFQA+P+ SH  AVKR+ RY+  T E  +WY   ++  +  +SD
Sbjct: 1563 LTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSD 1622

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            ADFAG ++DRKSTSGTC FLG +LVSW S+KQ+SV+ STAEAEY++A S  +QVLW+   
Sbjct: 1623 ADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMIST 1682

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L+D+GL + G+P+ CDNTSAIN+ KNPVQHSRTK           +VE G I L FV +E
Sbjct: 1683 LKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESE 1742

Query: 980  KQLADIFIKPLSEESFCRIRMELGLMSL 897
            KQLADIF KPL    F  +R ELG++ +
Sbjct: 1743 KQLADIFTKPLDRSRFEFLRSELGVIGV 1770



 Score =  177 bits (449), Expect(4) = 0.0
 Identities = 89/191 (46%), Positives = 122/191 (63%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            C+ GK T +S K    V T    ++LH D  GP  + S+GGK YV V+VD +SR++   F
Sbjct: 903  CRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYF 962

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            L  K+E F +F +L + +  +   +L AIRSD+G EF+N  FE FC+  G+ H FS+P  
Sbjct: 963  LESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYV 1022

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNGVVERKNRTL EMARTML +   P+ F  EA++ AC+I NR  +++ L KTPY+L 
Sbjct: 1023 PQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELR 1082

Query: 2960 KGRKPTLDTSR 2928
             GR+P +   R
Sbjct: 1083 FGRRPKVSHLR 1093



 Score = 97.4 bits (241), Expect(4) = 0.0
 Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
 Frame = -2

Query: 2955 KKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLVVEES 2776
            ++  + + ++FGCKCF             +++ +GIFLGY++  +AYRV+   T  + E+
Sbjct: 1085 RRPKVSHLRVFGCKCFVLKSGNLDKFE--SRSLDGIFLGYATHSRAYRVYVLSTNKIVET 1142

Query: 2775 IYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEP--------QGENAEQNIADQ 2620
              VTF E+   A            + ++  + +++ +  P        Q   +    +  
Sbjct: 1143 CEVTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSPSTTSPS 1202

Query: 2619 GESQANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGN 2440
            G++   +S A   EE++      + P+       H  ++++    E++ TR+   ++V N
Sbjct: 1203 GDAPTTSSSAA--EEIDGGTSGPTAPRH--IQNRHPPDSMIGGLGERV-TRNRSYELV-N 1256

Query: 2439 VAFISQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKL 2260
             AF++  +PK    A  +EN + AM EEL  FERN V  LV  P   +VIGTKWVF+NKL
Sbjct: 1257 SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKL 1316

Query: 2259 KKIG 2248
             + G
Sbjct: 1317 GEDG 1320



 Score = 84.7 bits (208), Expect(4) = 0.0
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+ ++VRNKARLVAQG++Q EGLDF ETFAP+ARLEAIR+L  FA  K F L+QMDVKS
Sbjct: 1318 EDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKS 1376


>gb|ABF94836.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1948

 Score =  460 bits (1183), Expect(4) = 0.0
 Identities = 232/388 (59%), Positives = 285/388 (73%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            ++EEVY++QP GFE  + PNHVFKL KALYGLKQAPRA YERL  FLL+N F  G VDKT
Sbjct: 1383 IEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKT 1442

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFT     + L+VQ+YVDDIIF  +  +L   F+ +M  EFE SMMGEL FFLGLQIKQ 
Sbjct: 1443 LFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQT 1502

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            K+GI ++Q KY+KELLKKF M + KP  TPM+TT  L  DE G+ V+ + YR MIGSLLY
Sbjct: 1503 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLY 1562

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            LTASRPDIHFSVCLCARFQA+P+ SH  AVKR+ RY+  T E  +WY   ++  +  +SD
Sbjct: 1563 LTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSD 1622

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            ADFAG ++DRKSTSGTC FLG +LVSW S+KQ+SV+ STAEAEY++A S  +QVLW+   
Sbjct: 1623 ADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMIST 1682

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L+D+GL + G+P+ CDNTSAIN+ KNPVQHSRTK           +VE G I L FV +E
Sbjct: 1683 LKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESE 1742

Query: 980  KQLADIFIKPLSEESFCRIRMELGLMSL 897
            KQLADIF KPL    F  +R ELG++ +
Sbjct: 1743 KQLADIFTKPLDRSRFEFLRSELGVIGV 1770



 Score =  177 bits (449), Expect(4) = 0.0
 Identities = 89/191 (46%), Positives = 122/191 (63%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            C+ GK T +S K    V T    ++LH D  GP  + S+GGK YV V+VD +SR++   F
Sbjct: 903  CRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYF 962

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            L  K+E F +F +L + +  +   +L AIRSD+G EF+N  FE FC+  G+ H FS+P  
Sbjct: 963  LESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYV 1022

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNGVVERKNRTL EMARTML +   P+ F  EA++ AC+I NR  +++ L KTPY+L 
Sbjct: 1023 PQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELR 1082

Query: 2960 KGRKPTLDTSR 2928
             GR+P +   R
Sbjct: 1083 FGRRPKVSHLR 1093



 Score = 97.4 bits (241), Expect(4) = 0.0
 Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
 Frame = -2

Query: 2955 KKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLVVEES 2776
            ++  + + ++FGCKCF             +++ +GIFLGY++  +AYRV+   T  + E+
Sbjct: 1085 RRPKVSHLRVFGCKCFVLKSGNLDKFE--SRSLDGIFLGYATHSRAYRVYVLSTNKIVET 1142

Query: 2775 IYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEP--------QGENAEQNIADQ 2620
              VTF E+   A            + ++  + +++ +  P        Q   +    +  
Sbjct: 1143 CEVTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSPSTTSPS 1202

Query: 2619 GESQANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGN 2440
            G++   +S A   EE++      + P+       H  ++++    E++ TR+   ++V N
Sbjct: 1203 GDAPTTSSSAA--EEIDGGTSGPTAPRH--IQNRHPPDSMIGGLGERV-TRNRSYELV-N 1256

Query: 2439 VAFISQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKL 2260
             AF++  +PK    A  +EN + AM EEL  FERN V  LV  P   +VIGTKWVF+NKL
Sbjct: 1257 SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKL 1316

Query: 2259 KKIG 2248
             + G
Sbjct: 1317 GEDG 1320



 Score = 84.7 bits (208), Expect(4) = 0.0
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+ ++VRNKARLVAQG++Q EGLDF ETFAP+ARLEAIR+L  FA  K F L+QMDVKS
Sbjct: 1318 EDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKS 1376


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score =  411 bits (1056), Expect(4) = 0.0
 Identities = 207/390 (53%), Positives = 274/390 (70%)
 Frame = -3

Query: 2063 YLKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDK 1884
            YL EE Y+EQP GF     P+HV++L KALYGLKQAPRA YERL++FL +  + +G +DK
Sbjct: 1159 YLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDK 1218

Query: 1883 TLFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQ 1704
            TLF K  +EN++I Q+YVDDI+F    + + + F   MQ EFE S++GEL +FLGLQ+KQ
Sbjct: 1219 TLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQ 1278

Query: 1703 LKDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLL 1524
            ++D I ++Q+KY K ++KKF MENA   +TP  T +KL KDE G +V+  LYR MIGSLL
Sbjct: 1279 MEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLL 1338

Query: 1523 YLTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYS 1344
            YLTASRPDI ++V  CAR+QANPK SHL  VKRIL+Y+ GT +  + Y   +   LVGY 
Sbjct: 1339 YLTASRPDITYAVGGCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYC 1398

Query: 1343 DADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKH 1164
            DAD+AGS  DRKST G C +LG   +SW+SKKQ  VSLSTAEAEYI+AGS  +Q++W+K 
Sbjct: 1399 DADWAGSVDDRKSTFGGCFYLGTNFISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1458

Query: 1163 QLEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPT 984
             L+++ +    + ++CDN SAIN++KNPVQHSRTK            V+  VI L  V T
Sbjct: 1459 MLKEYNVEQDVMTLYCDNLSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLEHVDT 1518

Query: 983  EKQLADIFIKPLSEESFCRIRMELGLMSLK 894
            E+Q+ADIF K L    F ++R +LG+  L+
Sbjct: 1519 EEQIADIFTKALDANQFEKLRGKLGICLLE 1548



 Score =  198 bits (504), Expect(4) = 0.0
 Identities = 99/187 (52%), Positives = 125/187 (66%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            CQ+GKQ + S +  +  +TSR LE+LH DL GP+ + SLG K Y +V+VD +SRFT   F
Sbjct: 704  CQIGKQVKMSNQKLQHQTTSRVLELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFTWVNF 763

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            + +K + F  F  L  R+Q +K   +  IRSDHGREFEN  F EFC  +GI H FSA  T
Sbjct: 764  IREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAIT 823

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNG+VERKNRTLQE AR ML   +LP    AEA+NTACYI NR  ++     T Y++W
Sbjct: 824  PQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIW 883

Query: 2960 KGRKPTL 2940
            KGRKPT+
Sbjct: 884  KGRKPTV 890



 Score =  123 bits (308), Expect(4) = 0.0
 Identities = 80/241 (33%), Positives = 121/241 (50%)
 Frame = -2

Query: 2967 VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLV 2788
            + + +K  + +F I G  C+              K++ GIFLGYS+  +AYRVFN RT  
Sbjct: 882  IWKGRKPTVKHFHICGSPCYILADREQRRKMDP-KSDAGIFLGYSTNSRAYRVFNSRTRT 940

Query: 2787 VEESIYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEPQGENAEQNIADQGESQ 2608
            V ESI V   +                       +K+ E +    G+N     A   E+ 
Sbjct: 941  VMESINVVVDDLTPAR------------------KKDVEEDVRTSGDNVADT-AKSAENA 981

Query: 2607 ANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGNVAFI 2428
             N+  A     +N   K  S+       K H KE ++ +P+  + TRS   +++ N  F+
Sbjct: 982  ENSDSATDEPNINQPDKRPSI----RIQKMHPKELIIGDPNRGVTTRSREIEIISNSCFV 1037

Query: 2427 SQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIG 2248
            S+I+PK  +EA  +E  + AMQEEL QF+RN V +LVPRP+  +VIGTKW+F+NK  + G
Sbjct: 1038 SKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEG 1097

Query: 2247 M 2245
            +
Sbjct: 1098 V 1098



 Score = 73.6 bits (179), Expect(4) = 0.0
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = -1

Query: 2245 VVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            + RNKARLVAQGY+Q EG+DF ETFAP ARLE+IR+L   A    F LYQMDVKS
Sbjct: 1099 ITRNKARLVAQGYTQIEGVDFDETFAPGARLESIRLLLGVACILKFKLYQMDVKS 1153


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  410 bits (1053), Expect(4) = 0.0
 Identities = 206/390 (52%), Positives = 275/390 (70%)
 Frame = -3

Query: 2063 YLKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDK 1884
            YL EE Y+EQP GF      +HV++L KALYGLKQAPRA YERL++FL +  + +G +DK
Sbjct: 1185 YLNEEAYVEQPKGFVDPTHLDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDK 1244

Query: 1883 TLFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQ 1704
            TLF K  +EN++I Q+YVDDI+F    + + + F   MQ EFE S++GEL++FLGLQ+KQ
Sbjct: 1245 TLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVPQMQSEFEMSLVGELHYFLGLQVKQ 1304

Query: 1703 LKDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLL 1524
            ++D I ++Q+KY K ++KKF MENA   +TP  T +KL KDE G +V+  LYR MIGSLL
Sbjct: 1305 MEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQNLYRSMIGSLL 1364

Query: 1523 YLTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYS 1344
            YLTASRPDI F+V +CAR+QANPK SHL  VKRIL+Y+ GT +  + Y   +   LVGY 
Sbjct: 1365 YLTASRPDITFAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYC 1424

Query: 1343 DADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKH 1164
            DAD+AGS  DRK TSG C +LG  L+SW+SKKQ  VSLSTAEAEYI+AGS  +Q++W+K 
Sbjct: 1425 DADWAGSADDRKCTSGGCFYLGTNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1484

Query: 1163 QLEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPT 984
             L+++ +    + ++CDN SAIN++KNPVQH+RTK            V+  +I L  V T
Sbjct: 1485 MLKEYNVEQDVMTLYCDNMSAINISKNPVQHNRTKHIDIRHHYIRDLVDDKIITLEHVDT 1544

Query: 983  EKQLADIFIKPLSEESFCRIRMELGLMSLK 894
            E+Q+ADIF K L    F ++R +LG   L+
Sbjct: 1545 EEQVADIFTKALDANQFEKLRGKLGTCLLE 1574



 Score =  198 bits (504), Expect(4) = 0.0
 Identities = 98/187 (52%), Positives = 124/187 (66%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            CQ+GKQ + S +  +  +TS  LE+LH DL GP+ + SLGGK Y +V+VD +SRFT   F
Sbjct: 730  CQIGKQVKMSHQKLQHQTTSMVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNF 789

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            + +K + F  F  L  R+Q +K   +  IRSDHGREFEN  F EFC  +GI H FSA  T
Sbjct: 790  IREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAIT 849

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNG+VERKNRTLQE  R ML   +LP    AEA+NTACYI NR  ++     T Y++W
Sbjct: 850  PQQNGIVERKNRTLQEATRVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIW 909

Query: 2960 KGRKPTL 2940
            KGRKPT+
Sbjct: 910  KGRKPTV 916



 Score =  120 bits (300), Expect(4) = 0.0
 Identities = 79/241 (32%), Positives = 121/241 (50%)
 Frame = -2

Query: 2967 VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLV 2788
            + + +K  + +F IFG  C+              K++ GIFLGYS+  +AYRVFN RT  
Sbjct: 908  IWKGRKPTVKHFHIFGSPCYILADREQRRKMDP-KSDAGIFLGYSTNSRAYRVFNSRTRT 966

Query: 2787 VEESIYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEPQGENAEQNIADQGESQ 2608
            V ESI V                        D      + + E     +E N+AD  +S 
Sbjct: 967  VMESINVVV----------------------DDLTPARKKDVEEDVRTSEDNVADTAKSA 1004

Query: 2607 ANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGNVAFI 2428
             N   ++   +  +  + +  P      K   KE ++ +P+  + TRS   ++V N  F+
Sbjct: 1005 ENAEKSDSTTDEPNINQPDKSPFI-RIQKMQPKELIIGDPNRGVTTRSREIEIVSNSCFV 1063

Query: 2427 SQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIG 2248
            S+I+PK  +EA  +E  + AMQEEL QF+RN V +LVPRP+  +VIGTKW+F+NK  + G
Sbjct: 1064 SKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEG 1123

Query: 2247 M 2245
            +
Sbjct: 1124 V 1124



 Score = 76.3 bits (186), Expect(4) = 0.0
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = -1

Query: 2245 VVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            + RNKARLVAQGY+Q EG+DF ETFAP+ARLE+IR+L   A    F LYQMDVKS
Sbjct: 1125 ITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKS 1179


>emb|CAN65521.1| hypothetical protein VITISV_025368 [Vitis vinifera]
          Length = 1291

 Score =  380 bits (977), Expect(4) = 0.0
 Identities = 200/386 (51%), Positives = 255/386 (66%)
 Frame = -3

Query: 2054 EEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKTLF 1875
            EEVY+EQP GF+    PNHV++L KALY LKQAPRA +ERL+ +LL+  F+R  VD+TLF
Sbjct: 931  EEVYVEQPKGFQDPRYPNHVYRLRKALYSLKQAPRAWHERLTSYLLKKGFMRRGVDRTLF 990

Query: 1874 TKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQLKD 1695
             +   E +L+ Q+YVDDI+F +T      DFA  M+ EFE SM                 
Sbjct: 991  IRRNDEVLLVAQIYVDDIVFGSTFSECALDFAKEMKSEFEMSM----------------- 1033

Query: 1694 GIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLYLT 1515
                      +EL+KKF++E+ K  +TPM T +KL KDE GK V+  LYR MIGSLLYLT
Sbjct: 1034 ---------ARELVKKFRLESTKHFRTPMPTNLKLSKDESGKGVDETLYRSMIGSLLYLT 1084

Query: 1514 ASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSDAD 1335
            ASR DI FSV +CAR+QA PKESHLIA+KRI+RY+ GT E+ LWYP DT  D+  Y+DAD
Sbjct: 1085 ASRLDITFSVGVCARYQACPKESHLIALKRIIRYIAGTLELGLWYPFDTHSDVACYTDAD 1144

Query: 1334 FAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQLE 1155
            +AG+  DRK+TSG C ++G+ LV W SKKQ S+SLS AEAEYI+ GSC +Q+LWIK  L 
Sbjct: 1145 WAGNVDDRKNTSGGCFYIGNCLVVWMSKKQNSISLSIAEAEYIATGSCCSQLLWIKQILR 1204

Query: 1154 DFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTEKQ 975
            D+ +    I +FCDNTS IN++KNPV HSR K            VE  V+ L +VPTE Q
Sbjct: 1205 DYRIDQGTIVVFCDNTSVINISKNPVLHSRIKHIDIKHHFICDLVEDKVVLLEYVPTEGQ 1264

Query: 974  LADIFIKPLSEESFCRIRMELGLMSL 897
            + DI IKPL    F  +R  +GL ++
Sbjct: 1265 IVDILIKPLDVSRFESLRKSIGLCTV 1290



 Score =  193 bits (491), Expect(4) = 0.0
 Identities = 97/187 (51%), Positives = 127/187 (67%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TLF 3321
            CQ  KQTR++ K    + TS+ LE+LH DL GP+   SL GK Y+ V+VD YSR+    F
Sbjct: 465  CQKRKQTRSTHKRVNEILTSKPLELLHMDLIGPMRTKSLRGKKYILVMVDDYSRYAWVAF 524

Query: 3320 LTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPRT 3141
            L  K EAF  F ++  +IQN+K Y +  IRSD GR+F+N  F EFC+   I H FS PRT
Sbjct: 525  LRDKSEAFINFKDIGLKIQNEKRYPIERIRSDRGRKFDNYDFLEFCHSLEIKHEFSVPRT 584

Query: 3140 P*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKLW 2961
            P QNGVVE+KN  LQEMARTML++ +LP +F AEA+NT CY  NR  ++   +KT Y+LW
Sbjct: 585  PQQNGVVEKKNCVLQEMARTMLNQHELPTHFWAEAINTVCYTSNRTHMRPHTRKTCYELW 644

Query: 2960 KGRKPTL 2940
            K +KP++
Sbjct: 645  KSKKPSV 651



 Score =  108 bits (270), Expect(4) = 0.0
 Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 4/241 (1%)
 Frame = -2

Query: 2955 KKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLVVEES 2776
            KK ++ YF++F  +C+             +K+ EGIFLGYSS+ +AYRV+   +  + ES
Sbjct: 647  KKPSVKYFRVFRSRCYLLKDHENLGKFE-SKSEEGIFLGYSSKSRAYRVYILSSKCMVES 705

Query: 2775 IYVTFSE--SRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEPQGENAEQNIADQGESQAN 2602
            I V   +  SRS                 ++  ++E+++ + + +  +    D+G     
Sbjct: 706  INVIVDDLGSRSRECDEDRIDVSKDIEVIEEKSEDEKLSEDEEKKEEQGKKGDRG----- 760

Query: 2601 NS*ANPNEELNS*AKLESLPKDW-MFHKYHAKENLLTEPSEKIITRS*LR-KMVGNVAFI 2428
                          ++ES  K+  M  K H   N++    + ++TR   +   V  V + 
Sbjct: 761  --------------RIESSKKNKSMVPKNHPLSNVIGNYEDIMVTRRQSKLNEVNYVFYT 806

Query: 2427 SQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIG 2248
            SQI+PK  EEA ++E  + A+ EELNQF RN+V  LVPRPK+ +VIGTKW+F+NK+ + G
Sbjct: 807  SQIEPKNVEEALNDEAWVEALHEELNQFSRNDVWFLVPRPKDVNVIGTKWIFKNKMDENG 866

Query: 2247 M 2245
            +
Sbjct: 867  V 867



 Score = 69.3 bits (168), Expect(4) = 0.0
 Identities = 36/59 (61%), Positives = 43/59 (72%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            EN  + RNKA LVAQG+ Q EG+DF ETFAP+ARLE+I +L   A    F L+QMDVKS
Sbjct: 864  ENGVIXRNKAXLVAQGFKQIEGIDFDETFAPVARLESICILLVVACVWKFKLFQMDVKS 922


>gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1799

 Score =  459 bits (1182), Expect(4) = 0.0
 Identities = 233/386 (60%), Positives = 283/386 (73%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            ++EEVY++QP GFE  + PNHVFKL KALYGLKQAPRA YERL  FLL+N F  G VDKT
Sbjct: 1408 IEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKT 1467

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFT     + L+VQ+YVDDIIF  +  +L   F  +M  EFE SMMGEL FFLGLQIKQ 
Sbjct: 1468 LFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFFDVMSREFEMSMMGELTFFLGLQIKQT 1527

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            K+GI ++Q KY+KELLKKF M + KP  TPM+TT  L  DE G+ V+ + YR MIGSLLY
Sbjct: 1528 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLY 1587

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            LTASRPDIHFSVCLCARFQA+P+ SH  AVKRI RY+  T E  +WY   ++  +  +SD
Sbjct: 1588 LTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFSD 1647

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            ADFAG ++DRKSTSGTC FLG +LVSW S+KQ+SV+ STAEAEY++A S  +QVLW+   
Sbjct: 1648 ADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMIST 1707

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L+D+GL + G+P+ CDNTSAIN+ KNPVQHSRTK           +VE G I L FV +E
Sbjct: 1708 LKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESE 1767

Query: 980  KQLADIFIKPLSEESFCRIRMELGLM 903
            KQLADIF KPL    F  +R ELG++
Sbjct: 1768 KQLADIFTKPLDRSRFEFLRSELGVI 1793



 Score =  103 bits (256), Expect(4) = 0.0
 Identities = 74/197 (37%), Positives = 101/197 (51%), Gaps = 6/197 (3%)
 Frame = -3

Query: 3500 CQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGK------SYVFVIVDYYSR 3339
            C+ GK T +S K    V T    ++LH D  GP  + S+GGK      S+  ++V +   
Sbjct: 949  CRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWRKHLASFSLLLVVWLWS 1008

Query: 3338 FT*TLFLTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHN 3159
            F   LF     E F   + L  +I +    +L+ I           L E        NH 
Sbjct: 1009 FL-VLF-----EPFAVIMALNSKILH---LNLSVI-----------LLES-------NHQ 1041

Query: 3158 FSAPRTP*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKK 2979
            FS+P  P QNGVVERKNRTL EMARTML +   P+ F  EA++ AC+I NR  +++ L K
Sbjct: 1042 FSSPYVPQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHK 1101

Query: 2978 TPYKLWKGRKPTLDTSR 2928
            TPY+L  GR+P +   R
Sbjct: 1102 TPYELRFGRRPKVSHLR 1118



 Score = 99.8 bits (247), Expect(4) = 0.0
 Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 6/242 (2%)
 Frame = -2

Query: 2955 KKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLVVEES 2776
            ++  + + ++FGCKCF             +++ +GIFLGY++  +AYRV+   T  + E+
Sbjct: 1110 RRPKVSHLRVFGCKCFVLKSGNLDKFE--SRSLDGIFLGYATHSRAYRVYVLSTNKIVET 1167

Query: 2775 IYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEE------INNEPQGENAEQNIADQGE 2614
              VTF E+   A            + ++  + +++      +++ P  +     +     
Sbjct: 1168 CEVTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSISPPLDSTPPVQETGSPLTTSPS 1227

Query: 2613 SQANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGNVA 2434
              A  + ++  EE++      + P+       H  ++++    E++ TR+   ++V N A
Sbjct: 1228 GDAPTTSSSAAEEIDGGTSGPTAPRH--IQNRHPPDSMIGGLGERV-TRNRSYELV-NSA 1283

Query: 2433 FISQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKK 2254
            F++  +PK    A  +EN + AM EEL  FERN V  LV  P   SVIGTKWVF+NKL +
Sbjct: 1284 FVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFSVIGTKWVFKNKLGE 1343

Query: 2253 IG 2248
             G
Sbjct: 1344 DG 1345



 Score = 84.7 bits (208), Expect(4) = 0.0
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+ ++VRNKARLVAQG++Q EGLDF ETFAP+ARLEAIR+L  FA  K F L+QMDVKS
Sbjct: 1343 EDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKS 1401


>ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309698 [Fragaria vesca
            subsp. vesca]
          Length = 1541

 Score =  424 bits (1089), Expect(4) = 0.0
 Identities = 209/389 (53%), Positives = 280/389 (71%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            LKEEVY+EQP GF+    P+ V+KL K LYGLKQAPRA YERLS  L+++ ++RG VDKT
Sbjct: 1153 LKEEVYVEQPPGFQSLTHPDCVYKLDKVLYGLKQAPRAWYERLSNHLVDHGYVRGSVDKT 1212

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            +F K  +E+I+I Q+YVDDI+F +T  SL  +F  LM+ EFE S+ G+L++FLGLQ+ Q 
Sbjct: 1213 MFVKCTTEHIIIAQIYVDDIVFGSTSPSLVNEFTELMKKEFEMSLCGKLSYFLGLQVMQN 1272

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            ++G+ I Q+KY ++L+KKF ME A    TPMST+ K+  D  G NV+   YR MIGSL+Y
Sbjct: 1273 QNGLFICQSKYAQDLVKKFGMETATAFPTPMSTSCKISADMSGINVDQTNYRSMIGSLMY 1332

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            LTASRPDI +SV +CAR+QANPK+SH+ AVKRI+RY+ GT +  + Y  DT+ ++ GY+D
Sbjct: 1333 LTASRPDIAYSVGVCARYQANPKQSHVKAVKRIIRYVAGTLDHGIKYTFDTNVEIAGYTD 1392

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            +D+AG   DRKSTSG C F+G+ LVSW+SKKQ   SLSTA+AEY++AGSC  Q++W+K  
Sbjct: 1393 SDWAGDANDRKSTSGGCFFVGNNLVSWHSKKQNCTSLSTAQAEYVAAGSCCTQLMWMKQM 1452

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            + D+G +   + +FCDNTSAIN++KNPV HSRTK            VE  ++EL F+PTE
Sbjct: 1453 VADYGFQQGTLSLFCDNTSAINISKNPVLHSRTKHIEIRYHLIRGLVEEKLLELTFIPTE 1512

Query: 980  KQLADIFIKPLSEESFCRIRMELGLMSLK 894
            KQLAD+F KPL       +   +GL   K
Sbjct: 1513 KQLADLFTKPLDNARHLSLCKAIGLCDNK 1541



 Score =  108 bits (271), Expect(4) = 0.0
 Identities = 58/122 (47%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
 Frame = -3

Query: 3362 VIVDYYSRFT*TLFLTQKDEAFNYFVNLCKRIQNQK---GYSLAAIRSDHGREFENKLFE 3192
            V++D YS         +  +A  Y  ++ KR+ N+K      +  IRSDHG EFEN  FE
Sbjct: 743  VVLDGYSEAVFKRSRQRDTKACRYPPSVAKRVTNEKLNDDMHIVRIRSDHGTEFENSYFE 802

Query: 3191 EFCNEKGINHNFSAPRTP*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYIL 3012
             +C E G++H FSAP TP  NG+VERKN+ L E++R ML+ S L   F AEAVN ACY L
Sbjct: 803  NYCEEFGVHHEFSAPITPQHNGIVERKNKVLVELSRVMLAASGLDHSFWAEAVNNACYTL 862

Query: 3011 NR 3006
            NR
Sbjct: 863  NR 864



 Score =  102 bits (253), Expect(4) = 0.0
 Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 27/250 (10%)
 Frame = -2

Query: 2913 CFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRVFNRRTLVVEESIYVTFSESRSTAPX 2734
            C+T           DAK+++ +FLGY+   + YRV+N+RT  + ES+ V  +++      
Sbjct: 859  CYTLNRGQRVFDKFDAKSDKRVFLGYAGNSRVYRVYNKRTSKIMESVNVAVNDALVCK-- 916

Query: 2733 XXXXXXXXXNYGNDQCEKNEEINNEPQGENAEQNIADQGESQANNS*ANPNEELNS*AKL 2554
                        ND C  +E+++ +     + +  +DQG+   N+S  + + +L    K 
Sbjct: 917  ------------NDGCVLSEQVSEQEAEPTSSETKSDQGD---NDSGMDDDTDLPGSGKD 961

Query: 2553 ESLPKDWMFH-------KYHAKENLLTEPSEKIITRS*LRKMVGNVA------------- 2434
             +L    +         K H   +++ + SE   TRS   ++V N +             
Sbjct: 962  ATLAIQPIHRSGKRQVQKDHDLSHVIGDVSEARKTRSKTGRLVSNFSVFKCFVAIHKDDI 1021

Query: 2433 -------FISQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQSVIGTKWV 2275
                   F+S I+PK  +EA  + + + AMQ+ELNQFER+NV  LV RPK+++VIGTKWV
Sbjct: 1022 NTITYYDFVSIIEPKNVKEALLDADWISAMQDELNQFERSNVWHLVSRPKDKNVIGTKWV 1081

Query: 2274 FRNKLKKIGM 2245
            F+NK  + G+
Sbjct: 1082 FKNKTDEKGI 1091



 Score = 79.0 bits (193), Expect(4) = 0.0
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = -1

Query: 2245 VVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            + RNKARLV QGYSQ EGLDF ETFA +ARLE++R+L   AY+  F LYQMDVKS
Sbjct: 1092 ITRNKARLVVQGYSQIEGLDFDETFAHVARLESVRLLLAVAYYLKFTLYQMDVKS 1146


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  472 bits (1215), Expect(3) = 0.0
 Identities = 229/385 (59%), Positives = 294/385 (76%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            ++EEVY++QP GFE  + P+HV+KL K+LYGLKQAPRA Y+RLS FL++NDF RG+VD T
Sbjct: 1326 IEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTT 1385

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LF ++  ++ILIVQ+YVDDIIF +T+ SLCK+F+ LMQ EFE SMMGEL FFLG+QI Q 
Sbjct: 1386 LFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQS 1445

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            K+G+ ++Q KYTKELLKKF++E+ K   TPM  T  L K++ G  V+ KLYRGMIGSLLY
Sbjct: 1446 KEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLY 1505

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            LTASRPDI FSVCLCARFQ++P+ESHL AVKRI RYL GT  + L Y K   + L+G+ D
Sbjct: 1506 LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCD 1565

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            AD+AG R++RKSTSG CQFLG  L+SW SK+Q ++++STAEAEYISA SC  Q+LW+KHQ
Sbjct: 1566 ADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQ 1625

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            LED+ +    IPI+CDNT+ I L+KNP+ HSR K           +V+ G++++ F+ TE
Sbjct: 1626 LEDYQINANSIPIYCDNTAVICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTE 1685

Query: 980  KQLADIFIKPLSEESFCRIRMELGL 906
             Q ADIF KPLS E F  I+  L +
Sbjct: 1686 HQWADIFTKPLSVERFDFIKKNLNM 1710



 Score =  134 bits (338), Expect(3) = 0.0
 Identities = 91/260 (35%), Positives = 135/260 (51%), Gaps = 13/260 (5%)
 Frame = -2

Query: 2988 IEKNSL*VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRV 2809
            +EK +  + + ++ NI YF  FGC C+             AKA  GIFLGYS + KAYRV
Sbjct: 1009 LEKTAYELFKGRRPNISYFHQFGCTCYILNTKDYLKKFD-AKAQRGIFLGYSERSKAYRV 1067

Query: 2808 FNRRTLVVEESIYVTFSE----------SRSTAPXXXXXXXXXXNYGNDQCEKNEEINNE 2659
            +N  T  VEES++V F +          S S A           +  +D  EK  E+ + 
Sbjct: 1068 YNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDS-EKYTEVESC 1126

Query: 2658 PQGE---NAEQNIADQGESQANNS*ANPNEELNS*AKLESLPKDWMFHKYHAKENLLTEP 2488
            P+ E    AE N   +   +  N  A+ + + N+   ++  PK +     H +E ++   
Sbjct: 1127 PEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQ--PK-FKHKSSHPEELIIGSK 1183

Query: 2487 SEKIITRS*LRKMVGNVAFISQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRP 2308
                 TRS  R+    +  +S I+PK  EEA  ++  ++AMQEELNQF+RN+V  LVP+P
Sbjct: 1184 DSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKP 1243

Query: 2307 KNQSVIGTKWVFRNKLKKIG 2248
              +++IGTKWVFRNKL + G
Sbjct: 1244 SQKNIIGTKWVFRNKLNEQG 1263



 Score = 84.0 bits (206), Expect(3) = 0.0
 Identities = 40/59 (67%), Positives = 48/59 (81%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E   V RNKARLVAQGYSQ+EG+D+ ETFAP+ARLEAIR+L ++A     +LYQMDVKS
Sbjct: 1261 EQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKS 1319



 Score =  219 bits (557), Expect = 9e-54
 Identities = 110/188 (58%), Positives = 137/188 (72%)
 Frame = -3

Query: 3503 ACQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TL 3324
            ACQ GK  ++SFKSK  VSTSR LE+LH DLFGPV  +SL G  Y  VIVD YSR+T   
Sbjct: 837  ACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVK 896

Query: 3323 FLTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPR 3144
            F+  KD A   F + C +IQ++K   +  +RSDHG EFEN+ FE FC + GI H FS+PR
Sbjct: 897  FIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPR 956

Query: 3143 TP*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKL 2964
            TP QNGVVERKNRTLQEMARTM+ ++ L K+F AEAVNT+CYI NR  ++  L+KT Y+L
Sbjct: 957  TPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYEL 1016

Query: 2963 WKGRKPTL 2940
            +KGR+P +
Sbjct: 1017 FKGRRPNI 1024


>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
            [Medicago truncatula]
          Length = 1654

 Score =  467 bits (1202), Expect(3) = e-177
 Identities = 229/385 (59%), Positives = 293/385 (76%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            ++EEVY++QP GFE  + P+HV+KL K+LYGLKQAPRA Y+RLS FL++NDF RG+VD T
Sbjct: 1265 IEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTT 1324

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LF ++  ++ILIVQ+YVDDIIF +T+ SLCK+F+ LMQ EFE SMMGEL FFL +QI Q 
Sbjct: 1325 LFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLVIQINQS 1384

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            K+G+ ++Q KYTKELLKKF++E+ K   TPM  T  L K++ G  V+ KLYRGMIGSLLY
Sbjct: 1385 KEGVYVHQTKYTKELLKKFKLEDCKVMYTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLY 1444

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            LTASRPDI FSVCLCARFQ++P+ESHL AVK I RYL GT  + L Y K   + L+G+ D
Sbjct: 1445 LTASRPDILFSVCLCARFQSDPRESHLTAVKIIFRYLKGTTNLGLLYRKSLDYKLIGFCD 1504

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            AD+AG R++RKSTSG CQFLG  L+SW SK+Q ++++STAEAEYISA SC  Q+LW+KHQ
Sbjct: 1505 ADYAGDRIERKSTSGNCQFLGENLISWASKRQVTIAMSTAEAEYISAASCCTQLLWMKHQ 1564

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            LED+ +    IPI+CDNT+AI L+KNP+ HSR K           +V+ G+++L F+ TE
Sbjct: 1565 LEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDLQFIDTE 1624

Query: 980  KQLADIFIKPLSEESFCRIRMELGL 906
             Q ADIF KPLS E F  I+  L +
Sbjct: 1625 HQWADIFTKPLSVERFDFIKKNLNM 1649



 Score =  124 bits (310), Expect(3) = e-177
 Identities = 85/257 (33%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
 Frame = -2

Query: 2988 IEKNSL*VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRV 2809
            +EK +  + + ++ NI YF  FGC C+              KA  GIFLGYS + KAYRV
Sbjct: 948  LEKIAYGLFKGRRLNISYFHQFGCTCYILNTKDYLKKFD-VKAQRGIFLGYSERSKAYRV 1006

Query: 2808 FNRRTLVVEESIYVTFS--ESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNEPQGENAEQ 2635
            +N  T  VEES++V F   E  S  P          +   D  E ++  N+E   E    
Sbjct: 1007 YNSETHCVEESMHVKFDDREPGSKTPEQSESNAGTTD-SEDASESDQPSNSEKYTEVESY 1065

Query: 2634 NIADQGESQANNS*ANPNEELNS*AKLESLPKD--------WMFHKYHAKENLLTEPSEK 2479
              A+      +NS A P+  + + +  E    +        +     H +E ++      
Sbjct: 1066 PEAEITPEVESNSEAEPSPIVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSP 1125

Query: 2478 IITRS*LRKMVGNVAFISQIKPKKYEEAQDEEN*MMAMQEELNQFERNNV*KLVPRPKNQ 2299
              TRS  R+    +  +S I+PK  EEA  ++  +++MQEELNQF+RN+V  LVP+P  +
Sbjct: 1126 RRTRSHFRQEETLIGLLSIIEPKTVEEALSDDGWILSMQEELNQFQRNDVWDLVPKPFQK 1185

Query: 2298 SVIGTKWVFRNKLKKIG 2248
            ++IGTKWVFRNK  + G
Sbjct: 1186 NIIGTKWVFRNKQNEQG 1202



 Score = 84.0 bits (206), Expect(3) = e-177
 Identities = 40/59 (67%), Positives = 48/59 (81%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E   V RNKARLVAQGYSQ+EG+D+ ETFAP+ARLEAIR+L ++A     +LYQMDVKS
Sbjct: 1200 EQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKS 1258



 Score =  212 bits (539), Expect = 1e-51
 Identities = 108/185 (58%), Positives = 133/185 (71%)
 Frame = -3

Query: 3503 ACQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TL 3324
            ACQ GK  ++SFKSK  VSTSR LE+LH DLFGPV  +SL G  Y  VIVD YSR+T   
Sbjct: 776  ACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVK 835

Query: 3323 FLTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPR 3144
            F+  KD A   F + C +IQ++K   +  +RSDHG EFEN+ FE FC + GI H FS+PR
Sbjct: 836  FIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPR 895

Query: 3143 TP*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKL 2964
            TP QNGVVERKNRTLQEMARTM+ ++ L K+F AEAVNT+CYI NR  ++  L+K  Y L
Sbjct: 896  TPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKIAYGL 955

Query: 2963 WKGRK 2949
            +KGR+
Sbjct: 956  FKGRR 960


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  471 bits (1211), Expect(3) = e-176
 Identities = 229/386 (59%), Positives = 293/386 (75%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            +KEEVY+EQP GFE  E PNHV++L KALYGLKQAPRA YE L  FL+ N F  GK D T
Sbjct: 671  IKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPT 730

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFTK+   ++ + Q+YVDDIIF +T++S C++F+ +M  +FE SMMGEL +FLG Q+KQL
Sbjct: 731  LFTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQL 790

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            ++G  I+Q KYT+++L KF M++AKP KTPM T   LD D  GK+V+ K+YR MIGSLLY
Sbjct: 791  QEGTFISQTKYTQDILAKFGMKDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLY 850

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            L ASRPDI  SVC+CARFQ++PKESHL AVKRILRYL  T +  LWYP+ ++FDL+GYSD
Sbjct: 851  LCASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSD 910

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            AD+AG +++RKSTSGTCQFLG +LVSW SKKQ SV+LSTAEAEYI+AG C AQ+LW++  
Sbjct: 911  ADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQT 970

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L D+G +   +P+ CDN SAI +  NPV+HSRTK           H + G IE+ ++ T+
Sbjct: 971  LRDYGYKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTK 1030

Query: 980  KQLADIFIKPLSEESFCRIRMELGLM 903
             QLADIF KPL E+SF R+R EL ++
Sbjct: 1031 DQLADIFTKPLDEQSFTRLRHELNIL 1056



 Score =  120 bits (301), Expect(3) = e-176
 Identities = 89/281 (31%), Positives = 126/281 (44%), Gaps = 33/281 (11%)
 Frame = -2

Query: 2988 IEKNSL*VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRV 2809
            ++K S  ++  KK NI YF++FG KCF              K  EG  LGY S  +AYRV
Sbjct: 331  LKKTSYELLTGKKPNISYFRVFGSKCFILIKRGRKSKFAP-KTVEGFLLGYDSNTRAYRV 389

Query: 2808 FNRRTLVVEESIYVTFSESRSTAPXXXXXXXXXXNYG----------NDQCEKNEE---- 2671
            FN+ T +VE S  V F E+  +                          D C K  E    
Sbjct: 390  FNKSTGLVEVSCDVVFDETNGSQVEQVDLDEIGEEQAPCIALRNMSIGDMCPKEFEEPPS 449

Query: 2670 --------------INNEPQGEN-AEQNIADQGESQANNS*ANPNEELNS*AKLESLPKD 2536
                            NE + +N  EQN  D+     +N       +     + E  P  
Sbjct: 450  TQDQPSSSMQASPPTQNEDEAQNDEEQNQEDEPPQDDSNDQGGDTNDQEKEDEEEPRPPH 509

Query: 2535 WMFHKY----HAKENLLTEPSEKIITRS*LRKMVGNVAFISQIKPKKYEEAQDEEN*MMA 2368
               H+     H  + +L +  + + TRS +     + +F+S I+P + EEA  + + ++A
Sbjct: 510  PRVHQAIQRDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVA 569

Query: 2367 MQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIGM 2245
            MQEELN F RN V  LVPRP NQ+V+GTKWVFRNK  + G+
Sbjct: 570  MQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGV 609



 Score = 80.5 bits (197), Expect(3) = e-176
 Identities = 40/59 (67%), Positives = 48/59 (81%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+  V RNKARLVA+GYSQ EGLDF ET+AP+ARLE+IR+L  +A +  F LYQMDVKS
Sbjct: 606  EHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKS 664



 Score =  194 bits (493), Expect = 2e-46
 Identities = 100/192 (52%), Positives = 121/192 (63%)
 Frame = -3

Query: 3503 ACQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TL 3324
            ACQ GKQ  T    K  ++T R LE+LH DLFGP+   S+GG  Y  VIVD YSRFT   
Sbjct: 159  ACQAGKQVGTHHPHKNIMTTDRPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVF 218

Query: 3323 FLTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPR 3144
            FL +K +         +R QN+ G  +  IRSD+G EF+N   E F  E+GI H FS+P 
Sbjct: 219  FLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSSPY 278

Query: 3143 TP*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKL 2964
            TP QNGVVERKNRTL +MARTML + K P  F AEAVNTACY +NR  +   LKKT Y+L
Sbjct: 279  TPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAVNTACYAINRLYLHRILKKTSYEL 338

Query: 2963 WKGRKPTLDTSR 2928
              G+KP +   R
Sbjct: 339  LTGKKPNISYFR 350


>gb|ABF67934.1| Opie3 pol polyprotein [Zea mays]
          Length = 1048

 Score =  474 bits (1219), Expect(3) = e-176
 Identities = 233/386 (60%), Positives = 290/386 (75%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            +KEEVY+EQP GFE    P+HV KL KALYGLKQAPRA YE L  FL+ N F  GK D T
Sbjct: 657  IKEEVYVEQPPGFEDERYPDHVCKLFKALYGLKQAPRAWYECLRDFLIANAFKVGKADPT 716

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFTK+   N+ + Q+YVDDIIF +T+   C++F+ +M  +F+ SMMGELN+FLG Q+KQL
Sbjct: 717  LFTKTCDGNLFVCQIYVDDIIFGSTNQKSCEEFSRVMTRKFKMSMMGELNYFLGFQVKQL 776

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            KDG  I+Q KYT++LLK+F M++AKP+KTPM T    D ++ GK+V+ K YR MIGSLLY
Sbjct: 777  KDGTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSMIGSLLY 836

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            L ASRPDI  SVC+CARFQ++PKE HL+AVKRILRYL+ T    LWYPK ++FDLVGYSD
Sbjct: 837  LCASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCFGLWYPKGSTFDLVGYSD 896

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            +D+AG +VDRKSTSGTCQFLG +LVSW SKKQTSV+LSTAEAEY+ AG C AQ+LW++  
Sbjct: 897  SDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAEYVVAGQCCAQLLWMRQT 956

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L DF      +P+ CDN SAI + +NPV+HSRTK           H + G IE+  V TE
Sbjct: 957  LRDFDYNLSKVPLLCDNESAIRMAENPVEHSRTKHIDIRHHFLRDHQQKGDIEVFHVSTE 1016

Query: 980  KQLADIFIKPLSEESFCRIRMELGLM 903
             QLADIF KPL E++FCR+R EL ++
Sbjct: 1017 NQLADIFTKPLDEKTFCRLRSELNVL 1042



 Score =  118 bits (296), Expect(3) = e-176
 Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 27/281 (9%)
 Frame = -2

Query: 3006 SVGKVYI----EKNSL*VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLG 2839
            ++ +VY+    +K S  ++   K N+ YF++FG KC+              KA EG  LG
Sbjct: 323  AINRVYLHRLLKKTSYELLTGNKPNVSYFRVFGSKCYILVKKGRNSKFAP-KAVEGFLLG 381

Query: 2838 YSSQKKAYRVFNRRTLVVEESIYVTFSESRSTA---------------------PXXXXX 2722
            Y S  KAYRVFN+ + +VE S  V F E+  +                            
Sbjct: 382  YDSNTKAYRVFNKSSGLVEVSSDVVFDETNGSPREQVIDCDDVDEEDVPTTAIRTMAIGD 441

Query: 2721 XXXXXNYGNDQCEKNEEINNEPQGENA--EQNIADQGESQANNS*ANPNEELNS*AKLES 2548
                  Y  DQ   + +++   Q +    +Q   DQG +Q ++      EE    A    
Sbjct: 442  VRPQEQYERDQSSSSTKVHPPTQDDEQVHQQEACDQGGAQVDHV----MEEEAQPAPPTQ 497

Query: 2547 LPKDWMFHKYHAKENLLTEPSEKIITRS*LRKMVGNVAFISQIKPKKYEEAQDEEN*MMA 2368
            +    M  + H  + +L + S+ + TRS L     + +F+S I+P + EEA  + + ++A
Sbjct: 498  VRA--MIQRDHPVDQILGDISKGVTTRSRLVNFCEHYSFVSSIEPFRVEEALLDPDWVLA 555

Query: 2367 MQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIGM 2245
            MQEELN F+RN V  LVPRPK Q+V+GTKWVFRNK  + G+
Sbjct: 556  MQEELNNFKRNEVWTLVPRPK-QNVVGTKWVFRNKQDEHGV 595



 Score = 77.4 bits (189), Expect(3) = e-176
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+  V RNKARLVA+GY+Q  GLDF ETFAP+ARLE+IR+L  +A   +F LYQMDVKS
Sbjct: 592  EHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHHSFRLYQMDVKS 650



 Score =  192 bits (488), Expect = 9e-46
 Identities = 102/192 (53%), Positives = 122/192 (63%)
 Frame = -3

Query: 3503 ACQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TL 3324
            ACQ GKQ   +  SK  ++TSR LE+LH DLFGPV   S+GG  Y  VIVD +SRFT   
Sbjct: 161  ACQAGKQVGGAHHSKNVMTTSRPLELLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVF 220

Query: 3323 FLTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPR 3144
            FL  K E         +R QN+    +  IRSD+G EF+N   EEF  E+GI H FSAP 
Sbjct: 221  FLQDKSETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPY 280

Query: 3143 TP*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKL 2964
            TP QNGVVERKNRTL +MARTML + K P+YF  EAVNTAC+ +NR  +   LKKT Y+L
Sbjct: 281  TPQQNGVVERKNRTLIDMARTMLGEFKTPEYFWTEAVNTACHAINRVYLHRLLKKTSYEL 340

Query: 2963 WKGRKPTLDTSR 2928
              G KP +   R
Sbjct: 341  LTGNKPNVSYFR 352


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  471 bits (1212), Expect(3) = e-175
 Identities = 229/386 (59%), Positives = 293/386 (75%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            +KEEVY+EQP GFE  E PNHV++L KALYGLKQAPRA YE L  FL+ N F  GK D T
Sbjct: 1500 IKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPT 1559

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFTK+   ++ + Q+YVDDIIF +T++S C++F+ +M  +FE SMMGEL +FLG Q+KQL
Sbjct: 1560 LFTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQL 1619

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            ++G  I+Q KYT+++L KF M++AKP KTPM T   LD D  GK+V+ K+YR MIGSLLY
Sbjct: 1620 REGTFISQTKYTQDILAKFGMKDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLY 1679

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            L ASRPDI  SVC+CARFQ++PKESHL AVKRILRYL  T +  LWYP+ ++FDL+GYSD
Sbjct: 1680 LCASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSD 1739

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            AD+AG +++RKSTSGTCQFLG +LVSW SKKQ SV+LSTAEAEYI+AG C AQ+LW++  
Sbjct: 1740 ADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQT 1799

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L D+G +   +P+ CDN SAI +  NPV+HSRTK           H + G IE+ ++ T+
Sbjct: 1800 LRDYGYKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTK 1859

Query: 980  KQLADIFIKPLSEESFCRIRMELGLM 903
             QLADIF KPL E+SF R+R EL ++
Sbjct: 1860 DQLADIFTKPLDEQSFTRLRHELNIL 1885



 Score =  117 bits (294), Expect(3) = e-175
 Identities = 88/282 (31%), Positives = 134/282 (47%), Gaps = 34/282 (12%)
 Frame = -2

Query: 2988 IEKNSL*VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLGYSSQKKAYRV 2809
            ++K S  ++  KK NI YF++FG KCF              K  EG  LGY S  +AYRV
Sbjct: 1160 LKKTSYELLTGKKPNISYFRVFGSKCFILIKRGRKSKFAP-KTVEGFLLGYDSNTRAYRV 1218

Query: 2808 FNRRTLVVEESIYVTFSESRST--------------APXXXXXXXXXXNYGNDQCEKNEE 2671
            FN+ T +VE S  V F E+  +              AP          +    + E+   
Sbjct: 1219 FNKSTGLVEVSCDVVFDETNGSQVEQVDLDEIGEEQAPCIALRNMSIGDVCPKESEEPPS 1278

Query: 2670 INNEP----------QGENAEQNIADQGES------QANNS*ANPNEELNS*AKLESLPK 2539
              ++P          Q E+  QN  +Q +       ++N+   + N++     + E  P 
Sbjct: 1279 TQDQPPSSMQASPPTQNEDEAQNDEEQNQEVKPPQDKSNDQGGDTNDQEKEDEE-EPRPP 1337

Query: 2538 DWMFHKY----HAKENLLTEPSEKIITRS*LRKMVGNVAFISQIKPKKYEEAQDEEN*MM 2371
                H+     H  + +L +  + + TRS +     + +F+S I+P + EEA  + + ++
Sbjct: 1338 HPRVHQAIQRDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVV 1397

Query: 2370 AMQEELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIGM 2245
            AMQEELN F RN V  LVPRP NQ+V+GTKWVFRNK  + G+
Sbjct: 1398 AMQEELNNFTRNEVWHLVPRP-NQNVVGTKWVFRNKQDEHGV 1438



 Score = 80.5 bits (197), Expect(3) = e-175
 Identities = 40/59 (67%), Positives = 48/59 (81%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+  V RNKARLVA+GYSQ EGLDF ET+AP+ARLE+IR+L  +A +  F LYQMDVKS
Sbjct: 1435 EHGVVTRNKARLVAKGYSQVEGLDFDETYAPVARLESIRILLAYATYHGFKLYQMDVKS 1493



 Score =  194 bits (493), Expect = 2e-46
 Identities = 100/192 (52%), Positives = 121/192 (63%)
 Frame = -3

Query: 3503 ACQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TL 3324
            ACQ GKQ  T    K  ++T R LE+LH DLFGP+   S+GG  Y  VIVD YSRFT   
Sbjct: 988  ACQAGKQVGTHHPHKNIMTTDRPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVF 1047

Query: 3323 FLTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPR 3144
            FL +K +         +R QN+ G  +  IRSD+G EF+N   E F  E+GI H FS+P 
Sbjct: 1048 FLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSSPY 1107

Query: 3143 TP*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKL 2964
            TP QNGVVERKNRTL +MARTML + K P  F AEAVNTACY +NR  +   LKKT Y+L
Sbjct: 1108 TPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAVNTACYAINRLYLHRILKKTSYEL 1167

Query: 2963 WKGRKPTLDTSR 2928
              G+KP +   R
Sbjct: 1168 LTGKKPNISYFR 1179


>gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score =  476 bits (1224), Expect(3) = e-175
 Identities = 233/386 (60%), Positives = 292/386 (75%)
 Frame = -3

Query: 2060 LKEEVYIEQPLGFECFEKPNHVFKLIKALYGLKQAPRACYERLSKFLLENDFLRGKVDKT 1881
            +KEEVY+EQP GFE    P+HV KL KALYGLKQAPRA YE L  FL+ N F  GK D T
Sbjct: 657  IKEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECLRDFLIANAFKVGKADPT 716

Query: 1880 LFTKSQSENILIVQVYVDDIIFRATDDSLCKDFASLMQGEFEKSMMGELNFFLGLQIKQL 1701
            LFTK+   ++ + Q+YVDDIIF +T+   C++F+ +M  +FE SMMGELN+FLG Q+KQL
Sbjct: 717  LFTKTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEMSMMGELNYFLGFQVKQL 776

Query: 1700 KDGIAINQAKYTKELLKKFQMENAKPSKTPMSTTVKLDKDEKGKNVNSKLYRGMIGSLLY 1521
            KDG  I+Q KYT++LLK+F M++AKP+KTPM T    D ++ GK+++ K YR MIGSLLY
Sbjct: 777  KDGTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGKSIDQKAYRSMIGSLLY 836

Query: 1520 LTASRPDIHFSVCLCARFQANPKESHLIAVKRILRYLIGTQEISLWYPKDTSFDLVGYSD 1341
            L ASRPDI  SVC+CARFQ++PKE HL+AVKRILRYL+ T    LWYPK ++FDLVGYSD
Sbjct: 837  LCASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCFGLWYPKGSTFDLVGYSD 896

Query: 1340 ADFAGSRVDRKSTSGTCQFLGHALVSWYSKKQTSVSLSTAEAEYISAGSCVAQVLWIKHQ 1161
            +D+AG +VDRKSTSGTCQFLG +LVSW SKKQTSV+LSTAEAEY++AG C AQ+LW++  
Sbjct: 897  SDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAEYVAAGQCCAQLLWMRQT 956

Query: 1160 LEDFGLRYKGIPIFCDNTSAINLTKNPVQHSRTKXXXXXXXXXXXHVESGVIELIFVPTE 981
            L DFG     +P+ CDN SAI + +NPV+HSRTK           H + G IE+  V TE
Sbjct: 957  LRDFGYNLSKVPLLCDNESAIRMAENPVEHSRTKHIDIRHHFLRDHQQKGDIEVFHVSTE 1016

Query: 980  KQLADIFIKPLSEESFCRIRMELGLM 903
             QLADIF KPL E++FCR+R EL ++
Sbjct: 1017 NQLADIFTKPLDEKTFCRLRSELNVI 1042



 Score =  116 bits (290), Expect(3) = e-175
 Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 25/279 (8%)
 Frame = -2

Query: 3006 SVGKVYI----EKNSL*VMERKKANIGYFKIFGCKCFTXXXXXXXXXXXDAKANEGIFLG 2839
            ++ +VY+    +K S  ++   K N+ YF++FG KC+              KA EG  LG
Sbjct: 323  AINRVYLHRLLKKTSYELLTGNKPNVSYFRVFGSKCYILVKKGRNSKFAP-KAVEGFLLG 381

Query: 2838 YSSQKKAYRVFNRRTLVVEESIYVTFSESRSTAPXXXXXXXXXXNYGNDQCEKNEEINNE 2659
            Y S  KAYRVFN+ + +VE S  V F E+  +               +++      I   
Sbjct: 382  YDSNTKAYRVFNKSSGLVEVSSDVVFDETNGSPREQVVDCDDV----DEEDVPTAAIRTM 437

Query: 2658 PQGENAEQNIADQGESQANNS*ANPNEELNS*AKLESLPKDW------------------ 2533
              GE   Q   ++ +  ++     P E+     ++E+L +                    
Sbjct: 438  AIGEVRPQEQDERDQPSSSTMVHPPTEDDEQVPQVEALDQGGAQDDQVMEEEAQPAPPTQ 497

Query: 2532 ---MFHKYHAKENLLTEPSEKIITRS*LRKMVGNVAFISQIKPKKYEEAQDEEN*MMAMQ 2362
               M  + H  + +L + S+ + TRS L     + +F+S I+P + EEA  + + ++AMQ
Sbjct: 498  VRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHYSFVSSIEPFRVEEALLDPDWVLAMQ 557

Query: 2361 EELNQFERNNV*KLVPRPKNQSVIGTKWVFRNKLKKIGM 2245
            EELN F+RN V  LVPRPK Q+V+GTKWVFRNK  + G+
Sbjct: 558  EELNNFKRNEVWTLVPRPK-QNVVGTKWVFRNKQDEHGV 595



 Score = 77.4 bits (189), Expect(3) = e-175
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = -1

Query: 2257 ENRNVVRNKARLVAQGYSQEEGLDFVETFAPIARLEAIRMLCTFAYFKNFLLYQMDVKS 2081
            E+  V RNKARLVA+GY+Q  GLDF ETFAP+ARLE+IR+L  +A   +F LYQMDVKS
Sbjct: 592  EHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHHSFRLYQMDVKS 650



 Score =  192 bits (489), Expect = 7e-46
 Identities = 102/192 (53%), Positives = 123/192 (64%)
 Frame = -3

Query: 3503 ACQLGKQTRTSFKSKRFVSTSRSLEVLHFDLFGPVTLSSLGGKSYVFVIVDYYSRFT*TL 3324
            ACQ GKQ   +  SK  ++TSR LE+LH DLFGPV   S+GG  Y  VIVD +SRFT   
Sbjct: 161  ACQAGKQVGGAHHSKNVMTTSRPLELLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVF 220

Query: 3323 FLTQKDEAFNYFVNLCKRIQNQKGYSLAAIRSDHGREFENKLFEEFCNEKGINHNFSAPR 3144
            FL  K E         +R QN+    +  IRSD+G EF+N   EEF  E+GI H FSAP 
Sbjct: 221  FLQDKSETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPY 280

Query: 3143 TP*QNGVVERKNRTLQEMARTMLSKSKLPKYF*AEAVNTACYILNRALVKSTLKKTPYKL 2964
            TP QNGVVERKNRTL +MARTML + K P+YF +EAVNTAC+ +NR  +   LKKT Y+L
Sbjct: 281  TPQQNGVVERKNRTLIDMARTMLGEFKTPEYFWSEAVNTACHAINRVYLHRLLKKTSYEL 340

Query: 2963 WKGRKPTLDTSR 2928
              G KP +   R
Sbjct: 341  LTGNKPNVSYFR 352