BLASTX nr result

ID: Rauwolfia21_contig00007025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00007025
         (757 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362264.1| PREDICTED: U6 snRNA-associated Sm-like prote...   156   8e-36
ref|XP_004249138.1| PREDICTED: U6 snRNA-associated Sm-like prote...   156   8e-36
gb|ABK26542.1| unknown [Picea sitchensis]                             156   8e-36
ref|XP_002311269.2| hypothetical protein POPTR_0008s07780g, part...   155   1e-35
gb|EOY04603.1| Small nuclear ribonucleoprotein family protein is...   155   1e-35
ref|XP_006442140.1| hypothetical protein CICLE_v10023071mg [Citr...   155   1e-35
ref|XP_002316168.1| hypothetical protein POPTR_0010s18590g [Popu...   155   1e-35
gb|ABK22473.1| unknown [Picea sitchensis]                             154   2e-35
ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative ...   154   3e-35
gb|ESW11898.1| hypothetical protein PHAVU_008G068400g [Phaseolus...   154   4e-35
ref|XP_004505465.1| PREDICTED: U6 snRNA-associated Sm-like prote...   154   4e-35
gb|AFK41314.1| unknown [Lotus japonicus]                              154   4e-35
ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like prote...   154   4e-35
ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Me...   154   4e-35
ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycin...   154   4e-35
ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like prote...   154   4e-35
dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica Gro...   153   5e-35
ref|XP_002447708.1| hypothetical protein SORBIDRAFT_06g013920 [S...   153   5e-35
gb|EEC73251.1| hypothetical protein OsI_07364 [Oryza sativa Indi...   153   5e-35
ref|NP_001046930.1| Os02g0510100 [Oryza sativa Japonica Group] g...   153   5e-35

>ref|XP_006362264.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Solanum
           tuberosum]
          Length = 91

 Score =  156 bits (394), Expect = 8e-36
 Identities = 76/77 (98%), Positives = 77/77 (100%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTLG+GA
Sbjct: 75  NNVLYISTSKRTLGEGA 91


>ref|XP_004249138.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like isoform 1
           [Solanum lycopersicum] gi|460407397|ref|XP_004249139.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like
           isoform 2 [Solanum lycopersicum]
          Length = 90

 Score =  156 bits (394), Expect = 8e-36
 Identities = 76/77 (98%), Positives = 77/77 (100%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 14  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 73

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTLG+GA
Sbjct: 74  NNVLYISTSKRTLGEGA 90


>gb|ABK26542.1| unknown [Picea sitchensis]
          Length = 91

 Score =  156 bits (394), Expect = 8e-36
 Identities = 76/77 (98%), Positives = 77/77 (100%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTLG+GA
Sbjct: 75  NNVLYISTSKRTLGEGA 91


>ref|XP_002311269.2| hypothetical protein POPTR_0008s07780g, partial [Populus
           trichocarpa] gi|550332631|gb|EEE88636.2| hypothetical
           protein POPTR_0008s07780g, partial [Populus trichocarpa]
          Length = 134

 Score =  155 bits (392), Expect = 1e-35
 Identities = 76/77 (98%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 58  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 117

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL DGA
Sbjct: 118 NNVLYISTSKRTLADGA 134


>gb|EOY04603.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712707|gb|EOY04604.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712708|gb|EOY04605.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 91

 Score =  155 bits (392), Expect = 1e-35
 Identities = 76/77 (98%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL DGA
Sbjct: 75  NNVLYISTSKRTLADGA 91


>ref|XP_006442140.1| hypothetical protein CICLE_v10023071mg [Citrus clementina]
           gi|568879626|ref|XP_006492754.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Citrus
           sinensis] gi|118483023|gb|ABK93423.1| unknown [Populus
           trichocarpa] gi|557544402|gb|ESR55380.1| hypothetical
           protein CICLE_v10023071mg [Citrus clementina]
          Length = 91

 Score =  155 bits (392), Expect = 1e-35
 Identities = 76/77 (98%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL DGA
Sbjct: 75  NNVLYISTSKRTLADGA 91


>ref|XP_002316168.1| hypothetical protein POPTR_0010s18590g [Populus trichocarpa]
           gi|118482915|gb|ABK93371.1| unknown [Populus
           trichocarpa] gi|222865208|gb|EEF02339.1| hypothetical
           protein POPTR_0010s18590g [Populus trichocarpa]
          Length = 91

 Score =  155 bits (392), Expect = 1e-35
 Identities = 76/77 (98%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL DGA
Sbjct: 75  NNVLYISTSKRTLADGA 91


>gb|ABK22473.1| unknown [Picea sitchensis]
          Length = 91

 Score =  154 bits (390), Expect = 2e-35
 Identities = 75/77 (97%), Positives = 77/77 (100%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKR+LG+GA
Sbjct: 75  NNVLYISTSKRSLGEGA 91


>ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223525355|gb|EEF27977.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 91

 Score =  154 bits (389), Expect = 3e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYIST+KRTL DGA
Sbjct: 75  NNVLYISTTKRTLADGA 91


>gb|ESW11898.1| hypothetical protein PHAVU_008G068400g [Phaseolus vulgaris]
          Length = 91

 Score =  154 bits (388), Expect = 4e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL +GA
Sbjct: 75  NNVLYISTSKRTLAEGA 91


>ref|XP_004505465.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like isoform X1
           [Cicer arietinum] gi|502143790|ref|XP_004505466.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like
           isoform X2 [Cicer arietinum]
          Length = 90

 Score =  154 bits (388), Expect = 4e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 14  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 73

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL +GA
Sbjct: 74  NNVLYISTSKRTLAEGA 90


>gb|AFK41314.1| unknown [Lotus japonicus]
          Length = 90

 Score =  154 bits (388), Expect = 4e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 14  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 73

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL +GA
Sbjct: 74  NNVLYISTSKRTLAEGA 90


>ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Glycine
           max]
          Length = 91

 Score =  154 bits (388), Expect = 4e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL +GA
Sbjct: 75  NNVLYISTSKRTLAEGA 91


>ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Medicago truncatula]
           gi|355508672|gb|AES89814.1| U6 snRNA-associated Sm-like
           protein LSm6 [Medicago truncatula]
           gi|388502230|gb|AFK39181.1| unknown [Medicago
           truncatula]
          Length = 91

 Score =  154 bits (388), Expect = 4e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL +GA
Sbjct: 75  NNVLYISTSKRTLAEGA 91


>ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycine max]
           gi|255627589|gb|ACU14139.1| unknown [Glycine max]
          Length = 91

 Score =  154 bits (388), Expect = 4e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL +GA
Sbjct: 75  NNVLYISTSKRTLAEGA 91


>ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Vitis
           vinifera] gi|296084324|emb|CBI24712.3| unnamed protein
           product [Vitis vinifera]
          Length = 91

 Score =  154 bits (388), Expect = 4e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL +GA
Sbjct: 75  NNVLYISTSKRTLAEGA 91


>dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica Group]
           gi|215765012|dbj|BAG86709.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222622927|gb|EEE57059.1| hypothetical protein
           OsJ_06869 [Oryza sativa Japonica Group]
          Length = 101

 Score =  153 bits (387), Expect = 5e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           P+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 25  PSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 84

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL DGA
Sbjct: 85  NNVLYISTSKRTLTDGA 101


>ref|XP_002447708.1| hypothetical protein SORBIDRAFT_06g013920 [Sorghum bicolor]
           gi|241938891|gb|EES12036.1| hypothetical protein
           SORBIDRAFT_06g013920 [Sorghum bicolor]
          Length = 97

 Score =  153 bits (387), Expect = 5e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           P+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 21  PSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 80

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL DGA
Sbjct: 81  NNVLYISTSKRTLTDGA 97


>gb|EEC73251.1| hypothetical protein OsI_07364 [Oryza sativa Indica Group]
          Length = 97

 Score =  153 bits (387), Expect = 5e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           P+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 21  PSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 80

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL DGA
Sbjct: 81  NNVLYISTSKRTLTDGA 97


>ref|NP_001046930.1| Os02g0510100 [Oryza sativa Japonica Group]
           gi|113536461|dbj|BAF08844.1| Os02g0510100, partial
           [Oryza sativa Japonica Group]
          Length = 96

 Score =  153 bits (387), Expect = 5e-35
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +3

Query: 72  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 251
           P+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 20  PSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 79

Query: 252 NNVLYISTSKRTLGDGA 302
           NNVLYISTSKRTL DGA
Sbjct: 80  NNVLYISTSKRTLTDGA 96


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