BLASTX nr result
ID: Rauwolfia21_contig00006992
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00006992
(582 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 92 7e-24
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 91 9e-24
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 91 2e-23
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote... 89 4e-23
gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus... 89 5e-23
ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citr... 89 1e-22
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote... 89 2e-22
gb|EOY30223.1| Small nuclear ribonucleoprotein family protein is... 90 3e-22
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe... 87 3e-22
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5... 87 4e-22
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote... 86 4e-22
ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-l... 90 5e-22
ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citr... 90 5e-22
ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Me... 89 5e-22
ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [A... 87 5e-22
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri... 86 5e-22
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote... 90 8e-22
ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutr... 85 8e-22
ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arab... 85 8e-22
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote... 89 1e-21
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 91.7 bits (226), Expect(2) = 7e-24
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL+KEEL
Sbjct: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEEL 89
Score = 45.1 bits (105), Expect(2) = 7e-24
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDIYLSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 91.3 bits (225), Expect(2) = 9e-24
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVGDLYCDIPLGLY+IRGENVVLIGELDL+KEEL
Sbjct: 45 NAVLEGACERVIVGDLYCDIPLGLYIIRGENVVLIGELDLEKEEL 89
Score = 45.1 bits (105), Expect(2) = 9e-24
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDIYLSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
Length = 128
Score = 90.5 bits (223), Expect(2) = 2e-23
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL++EEL
Sbjct: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREEL 89
Score = 45.1 bits (105), Expect(2) = 2e-23
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDIYLSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
[Cicer arietinum]
Length = 128
Score = 89.4 bits (220), Expect(2) = 4e-23
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERV+VGDLYCDIPLGLYVIRGENVVLIGELD+++EEL
Sbjct: 45 NAVLEGACERVVVGDLYCDIPLGLYVIRGENVVLIGELDMEREEL 89
Score = 45.1 bits (105), Expect(2) = 4e-23
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDIYLSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
Length = 128
Score = 89.0 bits (219), Expect(2) = 5e-23
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVG+LYCDIPLGLYVIRGENVVLIGELDL++EEL
Sbjct: 45 NAVLEGACERVIVGELYCDIPLGLYVIRGENVVLIGELDLEREEL 89
Score = 45.1 bits (105), Expect(2) = 5e-23
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDIYLSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citrus clementina]
gi|568822947|ref|XP_006465886.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm1-like [Citrus
sinensis] gi|557528691|gb|ESR39941.1| hypothetical
protein CICLE_v10026767mg [Citrus clementina]
Length = 128
Score = 89.4 bits (220), Expect(2) = 1e-22
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL+++EL
Sbjct: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERDEL 89
Score = 43.5 bits (101), Expect(2) = 1e-22
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGP+D+YLSTSLASYLD
Sbjct: 1 MSWAGPDDVYLSTSLASYLD 20
>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum]
Length = 128
Score = 89.4 bits (220), Expect(2) = 2e-22
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVG++YCDIPLGLY+IRGENVVLIGELD+DKEEL
Sbjct: 45 NAVLEGACERVIVGEIYCDIPLGLYIIRGENVVLIGELDVDKEEL 89
Score = 42.7 bits (99), Expect(2) = 2e-22
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWA PEDIYLSTSLASYLD
Sbjct: 1 MSWASPEDIYLSTSLASYLD 20
>gb|EOY30223.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 90.1 bits (222), Expect(2) = 3e-22
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
N VLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL+KEEL
Sbjct: 45 NVVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEEL 89
Score = 41.2 bits (95), Expect(2) = 3e-22
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGP+DI+LSTSLA+YLD
Sbjct: 1 MSWAGPDDIFLSTSLATYLD 20
>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
Length = 128
Score = 86.7 bits (213), Expect(2) = 3e-22
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVG+LYCDIPLGLYVIRGENVVLIGELD ++EEL
Sbjct: 45 NAVLEGACERVIVGELYCDIPLGLYVIRGENVVLIGELDSEREEL 89
Score = 44.7 bits (104), Expect(2) = 3e-22
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPED+YLSTSLASYLD
Sbjct: 1 MSWAGPEDVYLSTSLASYLD 20
>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|566149434|ref|XP_006369123.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550347483|gb|ERP65692.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 87.0 bits (214), Expect(2) = 4e-22
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVGDLYCDI LGLYVIRGENVVLIGELDL++EEL
Sbjct: 45 NAVLEGACERVIVGDLYCDIHLGLYVIRGENVVLIGELDLEREEL 89
Score = 43.9 bits (102), Expect(2) = 4e-22
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDIYLSTSLA+YLD
Sbjct: 1 MSWAGPEDIYLSTSLANYLD 20
>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 86.3 bits (212), Expect(2) = 4e-22
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVG+LYCD+PLGLYVIRGENVVLIGELD ++EEL
Sbjct: 45 NAVLEGACERVIVGELYCDLPLGLYVIRGENVVLIGELDAEREEL 89
Score = 44.7 bits (104), Expect(2) = 4e-22
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPED+YLSTSLASYLD
Sbjct: 1 MSWAGPEDVYLSTSLASYLD 20
>ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Citrus sinensis]
Length = 128
Score = 89.7 bits (221), Expect(2) = 5e-22
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
N VLEGACER+IVGDLYCDIPLGLYVIRGENVVLIGELDL+KEEL
Sbjct: 45 NVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEEL 89
Score = 40.8 bits (94), Expect(2) = 5e-22
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGP+D++LSTSLA+YLD
Sbjct: 1 MSWAGPDDVFLSTSLATYLD 20
>ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citrus clementina]
gi|557556056|gb|ESR66070.1| hypothetical protein
CICLE_v10009897mg [Citrus clementina]
Length = 128
Score = 89.7 bits (221), Expect(2) = 5e-22
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
N VLEGACER+IVGDLYCDIPLGLYVIRGENVVLIGELDL+KEEL
Sbjct: 45 NVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEEL 89
Score = 40.8 bits (94), Expect(2) = 5e-22
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGP+D++LSTSLA+YLD
Sbjct: 1 MSWAGPDDVFLSTSLATYLD 20
>ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like
protein LSm1 [Medicago truncatula]
Length = 131
Score = 88.6 bits (218), Expect(2) = 5e-22
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGE+D+++EEL
Sbjct: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGEMDVEREEL 89
Score = 42.0 bits (97), Expect(2) = 5e-22
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWA PED+YLSTSLASYLD
Sbjct: 1 MSWAAPEDLYLSTSLASYLD 20
>ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
gi|548839141|gb|ERM99455.1| hypothetical protein
AMTR_s00131p00107350 [Amborella trichopoda]
Length = 128
Score = 87.0 bits (214), Expect(2) = 5e-22
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVGDLYCD+PLGLYVIRGENVVLIGELD ++EEL
Sbjct: 45 NAVLEGACERVIVGDLYCDLPLGLYVIRGENVVLIGELDPEREEL 89
Score = 43.5 bits (101), Expect(2) = 5e-22
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDI+LSTSLASYLD
Sbjct: 1 MSWAGPEDIFLSTSLASYLD 20
>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 85.5 bits (210), Expect(2) = 5e-22
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACER IVGDLYCDI LGLYVIRGENVVLIGELDL++EEL
Sbjct: 45 NAVLEGACERAIVGDLYCDIHLGLYVIRGENVVLIGELDLEREEL 89
Score = 45.1 bits (105), Expect(2) = 5e-22
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDIYLSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
product [Vitis vinifera]
Length = 128
Score = 90.1 bits (222), Expect(2) = 8e-22
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACER IVGD+YCDIPLGLYVIRGENVVL+GELDLDKEEL
Sbjct: 45 NAVLEGACERAIVGDIYCDIPLGLYVIRGENVVLLGELDLDKEEL 89
Score = 39.7 bits (91), Expect(2) = 8e-22
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPED+ STSLASYLD
Sbjct: 1 MSWAGPEDLLFSTSLASYLD 20
>ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutrema salsugineum]
gi|557108276|gb|ESQ48583.1| hypothetical protein
EUTSA_v10021763mg [Eutrema salsugineum]
Length = 128
Score = 84.7 bits (208), Expect(2) = 8e-22
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVG+ YCDIPLGLYVIRGENVVLIGELD ++EEL
Sbjct: 45 NAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGELDTEREEL 89
Score = 45.1 bits (105), Expect(2) = 8e-22
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDIYLSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata] gi|565482348|ref|XP_006298814.1| hypothetical
protein CARUB_v10014920mg [Capsella rubella]
gi|297328707|gb|EFH59126.1| hypothetical protein
ARALYDRAFT_478821 [Arabidopsis lyrata subsp. lyrata]
gi|482567523|gb|EOA31712.1| hypothetical protein
CARUB_v10014920mg [Capsella rubella]
Length = 128
Score = 84.7 bits (208), Expect(2) = 8e-22
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVG+ YCDIPLGLYVIRGENVVLIGELD ++EEL
Sbjct: 45 NAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGELDTEREEL 89
Score = 45.1 bits (105), Expect(2) = 8e-22
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWAGPEDIYLSTSLASYLD
Sbjct: 1 MSWAGPEDIYLSTSLASYLD 20
>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
tuberosum]
Length = 128
Score = 89.4 bits (220), Expect(2) = 1e-21
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = +1
Query: 448 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLDKEEL 582
NAVLEGACERVIVG++YCDIPLGLY+IRGENVVLIGELD+DKEEL
Sbjct: 45 NAVLEGACERVIVGEIYCDIPLGLYIIRGENVVLIGELDVDKEEL 89
Score = 39.7 bits (91), Expect(2) = 1e-21
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2
Query: 371 MSWAGPEDIYLSTSLASYLD 430
MSWA EDIYLSTSLASYLD
Sbjct: 1 MSWASSEDIYLSTSLASYLD 20