BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00006315
         (2506 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   984   0.0  
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   984   0.0  
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   982   0.0  
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   961   0.0  
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   934   0.0  
gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, pu...   897   0.0  
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   879   0.0  
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   876   0.0  
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   863   0.0  
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   860   0.0  
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   860   0.0  
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   858   0.0  
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   858   0.0  
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   855   0.0  
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   848   0.0  
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   846   0.0  
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   843   0.0  
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   843   0.0  
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   843   0.0  
gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus...   830   0.0  

>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  984 bits (2544), Expect = 0.0
 Identities = 512/836 (61%), Positives = 625/836 (74%), Gaps = 3/836 (0%)
 Frame = -3

Query: 2501 KLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXLKYVKEILLAKRNDH 2322
            +L +KL+DF+GTAN+LS   LDRI                     LKYVKE++LAKR +H
Sbjct: 35   RLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELVLAKRTNH 94

Query: 2321 SFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXXXXXXXXXXXXX 2142
            +FRMVVVGDPN++L EIG+P  +AE L +AE ++  N +                     
Sbjct: 95   AFRMVVVGDPNIELGEIGIPCHVAENLHMAESLSLRNWERMTDLCDLMILQRGGILVRRN 154

Query: 2141 XXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRVLPISSVLAINPL 1962
              LV +S+ D+LQ GDI++RPL DGD+++INRPPSIHQHSL+ALSVR+LPI+SVL+INPL
Sbjct: 155  GVLVRISVMDRLQNGDIIHRPLIDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPL 214

Query: 1961 VCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLLSLSHDSLTAAHL 1782
            VCSP RGDFDGDCLHGYIPQS+DSR+EL ELVAL +QL +GQ+G+NLLSLSHDSLTAAHL
Sbjct: 215  VCSPFRGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHL 274

Query: 1781 ILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSLLLPPGFDYLFPS 1602
            ILE GV L++ QMQQLQMFCPRQL + AI+     +  +WTGKQLFSLLLP   +Y+FPS
Sbjct: 275  ILEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPS 334

Query: 1601 NGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQEVLCEWLSMRGLS 1422
            NGV I EGEIVTSS GSSWLRD   NLF+ L+K+   ++LDLL+AAQ VLCEWLSMRGLS
Sbjct: 335  NGVCISEGEIVTSSGGSSWLRDVSDNLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLS 394

Query: 1421 VSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLSANSDGNEEALSF 1242
            VSLSDLY++SD   REN+IDEV  GLQEA+  SYI  LM+  N+++LS + + ++ ++ F
Sbjct: 395  VSLSDLYISSDSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGF 454

Query: 1241 AIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAMLRAGSKGNLLKLV 1062
              E MSI+QQ SA +SQA  SAFK+VF DIQ+L Y YAS DN+ LAML+AGSKGNLLKLV
Sbjct: 455  DFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLV 514

Query: 1061 QHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHK--VSDCGAYDIPEHSKSYIPLAVVKSSF 888
            QHSMCLGLQ S+ P+SFR+P QL C AWNNHK  +     + +PE   SYIP AVVKSSF
Sbjct: 515  QHSMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSF 574

Query: 887  LTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTVRNAYGNQLVQ 708
            L GLNPLECFVHSLT RDSSFSGHADVSGT+NRKLMFFMRDLYV YDGTVRNAYGNQ+VQ
Sbjct: 575  LAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQ 634

Query: 707  FSYKNTQD-GATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGALDLPCSALE 531
            FSY   +   +T   G+ + SH  +HA    GGHPVGS+AACAISEAAY ALD P SALE
Sbjct: 635  FSYYEAEKIASTKGTGDALESH--NHAI---GGHPVGSLAACAISEAAYSALDQPVSALE 689

Query: 530  TSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLERLLFSDIIS 351
            +SPLLNLKKILE G    SG++TAS+FLSK+LGRW HGFEYGALEVKGHLERLL S+++S
Sbjct: 690  SSPLLNLKKILESGAGSRSGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVS 749

Query: 350  NTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSAKQKLKINLP 171
              +I FS ET   +H  PW+CHFH+ KE VK +RL++RSI+DAL M++ +A  K   +LP
Sbjct: 750  TVMICFSPETRKSTHNCPWVCHFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLP 809

Query: 170  HVQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLPFLLRTVLR 3
            ++ IT K CS+A  + E  +E+CI               D LRD+V+PFLL TV++
Sbjct: 810  NLHITCKDCSVAEARKE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIK 864


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  984 bits (2544), Expect = 0.0
 Identities = 512/836 (61%), Positives = 625/836 (74%), Gaps = 3/836 (0%)
 Frame = -3

Query: 2501 KLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXLKYVKEILLAKRNDH 2322
            +L +KL+DF+GTAN+LS   LDRI                     LKYVKE++LAKR +H
Sbjct: 248  RLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELVLAKRTNH 307

Query: 2321 SFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXXXXXXXXXXXXX 2142
            +FRMVVVGDPN++L EIG+P  +AE L +AE ++  N +                     
Sbjct: 308  AFRMVVVGDPNIELGEIGIPCHVAENLHMAESLSLRNWERMTDLCDLMILQRGGILVRRN 367

Query: 2141 XXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRVLPISSVLAINPL 1962
              LV +S+ D+LQ GDI++RPL DGD+++INRPPSIHQHSL+ALSVR+LPI+SVL+INPL
Sbjct: 368  GVLVRISVMDRLQNGDIIHRPLIDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPL 427

Query: 1961 VCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLLSLSHDSLTAAHL 1782
            VCSP RGDFDGDCLHGYIPQS+DSR+EL ELVAL +QL +GQ+G+NLLSLSHDSLTAAHL
Sbjct: 428  VCSPFRGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHL 487

Query: 1781 ILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSLLLPPGFDYLFPS 1602
            ILE GV L++ QMQQLQMFCPRQL + AI+     +  +WTGKQLFSLLLP   +Y+FPS
Sbjct: 488  ILEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPS 547

Query: 1601 NGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQEVLCEWLSMRGLS 1422
            NGV I EGEIVTSS GSSWLRD   NLF+ L+K+   ++LDLL+AAQ VLCEWLSMRGLS
Sbjct: 548  NGVCISEGEIVTSSGGSSWLRDVSDNLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLS 607

Query: 1421 VSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLSANSDGNEEALSF 1242
            VSLSDLY++SD   REN+IDEV  GLQEA+  SYI  LM+  N+++LS + + ++ ++ F
Sbjct: 608  VSLSDLYISSDSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGF 667

Query: 1241 AIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAMLRAGSKGNLLKLV 1062
              E MSI+QQ SA +SQA  SAFK+VF DIQ+L Y YAS DN+ LAML+AGSKGNLLKLV
Sbjct: 668  DFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLV 727

Query: 1061 QHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHK--VSDCGAYDIPEHSKSYIPLAVVKSSF 888
            QHSMCLGLQ S+ P+SFR+P QL C AWNNHK  +     + +PE   SYIP AVVKSSF
Sbjct: 728  QHSMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSF 787

Query: 887  LTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTVRNAYGNQLVQ 708
            L GLNPLECFVHSLT RDSSFSGHADVSGT+NRKLMFFMRDLYV YDGTVRNAYGNQ+VQ
Sbjct: 788  LAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQ 847

Query: 707  FSYKNTQD-GATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGALDLPCSALE 531
            FSY   +   +T   G+ + SH  +HA    GGHPVGS+AACAISEAAY ALD P SALE
Sbjct: 848  FSYYEAEKIASTKGTGDALESH--NHAI---GGHPVGSLAACAISEAAYSALDQPVSALE 902

Query: 530  TSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLERLLFSDIIS 351
            +SPLLNLKKILE G    SG++TAS+FLSK+LGRW HGFEYGALEVKGHLERLL S+++S
Sbjct: 903  SSPLLNLKKILESGAGSRSGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVS 962

Query: 350  NTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSAKQKLKINLP 171
              +I FS ET   +H  PW+CHFH+ KE VK +RL++RSI+DAL M++ +A  K   +LP
Sbjct: 963  TVMICFSPETRKSTHNCPWVCHFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLP 1022

Query: 170  HVQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLPFLLRTVLR 3
            ++ IT K CS+A  + E  +E+CI               D LRD+V+PFLL TV++
Sbjct: 1023 NLHITCKDCSVAEARKE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIK 1077


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  982 bits (2538), Expect = 0.0
 Identities = 511/836 (61%), Positives = 624/836 (74%), Gaps = 3/836 (0%)
 Frame = -3

Query: 2501 KLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXLKYVKEILLAKRNDH 2322
            +L +KL+DF+GTAN+LS   LDRI                     LKYVKE++LAKR +H
Sbjct: 248  RLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELVLAKRTNH 307

Query: 2321 SFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXXXXXXXXXXXXX 2142
            +FRMVVVGDPN++L EIG+P  +AE L +AE ++  N +                     
Sbjct: 308  AFRMVVVGDPNIELGEIGIPCHVAENLHMAETLSLRNWERMTDLCDLMILQRGGILVRRN 367

Query: 2141 XXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRVLPISSVLAINPL 1962
              LV +S+ D LQKGDI++RPL DGD+++INRPPSIHQHSL+ALSVR+LPI+SVL+INPL
Sbjct: 368  GVLVRISVMDGLQKGDIIHRPLVDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPL 427

Query: 1961 VCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLLSLSHDSLTAAHL 1782
            VCSP RGDFDGDCLHGYIPQS+DS +EL ELVAL +QL +GQ+G+NLLSLSHDSLTAAHL
Sbjct: 428  VCSPFRGDFDGDCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHL 487

Query: 1781 ILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSLLLPPGFDYLFPS 1602
            ILE GV L++ QMQQLQMFCPRQL + AI+     +  +WTGKQLFSLLLP   +Y+FPS
Sbjct: 488  ILEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPS 547

Query: 1601 NGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQEVLCEWLSMRGLS 1422
            NGV I EGEIVTSS GSSWLRD   NLF+ L+K+   ++LDLL+AAQ VLCEWLSMRGLS
Sbjct: 548  NGVCISEGEIVTSSGGSSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLS 607

Query: 1421 VSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLSANSDGNEEALSF 1242
            VSLSDLY+++D   REN+IDEV  GLQEA+  SYI  LM+  N+++LS N + ++ ++ F
Sbjct: 608  VSLSDLYISADSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGF 667

Query: 1241 AIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAMLRAGSKGNLLKLV 1062
              E MSI+QQ SA +SQA  SAFK+VF DIQ+L Y YAS DN+ LAML+AGSKGNLLKLV
Sbjct: 668  DFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLV 727

Query: 1061 QHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHK--VSDCGAYDIPEHSKSYIPLAVVKSSF 888
            QH+MCLGLQ S+ P+SFR+P QL C AWNNHK  +     + +PE   SYIP AVVKSSF
Sbjct: 728  QHNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSF 787

Query: 887  LTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTVRNAYGNQLVQ 708
            L GLNPLECFVHSLT RDSSFSGHADVSGT+NRKLMFFMRDLYV YDGTVRNAYGNQ+VQ
Sbjct: 788  LAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQ 847

Query: 707  FS-YKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGALDLPCSALE 531
            FS Y+  Q  +T   G  + SH  +HA    GGHPVGS+AACAISEAAY ALD P SALE
Sbjct: 848  FSYYEAEQIASTKVTGEALESH--NHAI---GGHPVGSLAACAISEAAYCALDQPVSALE 902

Query: 530  TSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLERLLFSDIIS 351
            +SPLLNLKKILE G    +G++TAS+FLSK+LGRW HGFEYGALEVKGHLERLL S+++S
Sbjct: 903  SSPLLNLKKILESGAGSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVS 962

Query: 350  NTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSAKQKLKINLP 171
              +I FS ET   +H  PW+CHFH+ KE VK +RL++RS++DAL M++ +A  K   +LP
Sbjct: 963  TVMICFSPETRKSTHNCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLP 1022

Query: 170  HVQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLPFLLRTVLR 3
            ++ IT K CS+A  Q E  +E+CI               D LRD+V+PFLL TV++
Sbjct: 1023 NLHITCKDCSVAEVQKE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIK 1077


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  961 bits (2484), Expect = 0.0
 Identities = 490/830 (59%), Positives = 618/830 (74%)
 Frame = -3

Query: 2492 KKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXLKYVKEILLAKRNDHSFR 2313
            KKLVDF+GTANELS R LD +                     LK++KE+LL KR +HSFR
Sbjct: 298  KKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSKDSASKMSGLKWIKEVLLGKRTNHSFR 357

Query: 2312 MVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXXXXXXXXXXXXXXXL 2133
            M+VVGDP L+L EIG+P  IAE+L ++EH+N WN ++                      L
Sbjct: 358  MIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTL 417

Query: 2132 VHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRVLPISSVLAINPLVCS 1953
              +   +  Q GDI+YRPL+DGDI+LINRPPSIHQHS++ALSV+VLP++SV++INPL CS
Sbjct: 418  APVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCS 477

Query: 1952 PLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLLSLSHDSLTAAHLILE 1773
            P RGDFDGDCLHGYIPQSVDSRVEL ELVALN+QL N QSGRNLLSLS DSL+AAHL++E
Sbjct: 478  PFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVME 537

Query: 1772 DGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSLLLPPGFDYLFPSNGV 1593
            DGV LN  QMQQL+MFCP QLQ PAII     DT  WTGKQLFS+LLPPGF+Y+FP NGV
Sbjct: 538  DGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGV 597

Query: 1592 LIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQEVLCEWLSMRGLSVSL 1413
             I +GE+++SS+GS+WLRD DGNLF  L+K C+ ++LD L+AAQEVLCEWLSMRGLSVSL
Sbjct: 598  RISDGELISSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSL 657

Query: 1412 SDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLSANSDGNEEALSFAIE 1233
            SD+Y++SD   R+N+IDEV CGL  A+   +   L++D +Q +L  + + N+  +   ++
Sbjct: 658  SDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQ 717

Query: 1232 HMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAMLRAGSKGNLLKLVQHS 1053
             +   +Q SA + Q+ V AFKQ F DIQ+L YQYA+KDN+ LAML+AGSKGNLLKLVQ  
Sbjct: 718  SLWYERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQG 777

Query: 1052 MCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDCGAYDIPEHSKSYIPLAVVKSSFLTGLN 873
            +CLGLQ+S+ PLSF+IPHQL CAAWN  KV      D  E+++SYIP AVV++SFL GLN
Sbjct: 778  LCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGLN 837

Query: 872  PLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTVRNAYGNQLVQFSYKN 693
            PLECFVHS+T+RDSSFS +AD+ GT+ R+LMFFMRDLY+AYDGTVRNAYGNQLVQFSY N
Sbjct: 838  PLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSY-N 896

Query: 692  TQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGALDLPCSALETSPLLN 513
             +  +TP +G     +  + A D+ GG PVGS++ACAISEAAY ALD P S LE SPLLN
Sbjct: 897  IEHTSTPSDG----INEDTCAYDM-GGQPVGSISACAISEAAYSALDQPISLLEPSPLLN 951

Query: 512  LKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLERLLFSDIISNTLISF 333
            LK++LECG++KS+ DRT SLFLSKKL +  HGFEYGALEVK HLE+LLFSDI+S  +I F
Sbjct: 952  LKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVF 1011

Query: 332  SSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSAKQKLKINLPHVQITS 153
            S +  +++H SPW+CHFHVC+EI K++ L+  SIIDALYM+  SA+ + KINLP +QITS
Sbjct: 1012 SPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITS 1071

Query: 152  KGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLPFLLRTVLR 3
            K C + +++ + D   CI            +Q D +RD+V+PFLL  V++
Sbjct: 1072 KDCFVDMEKEDSDC-FCI-TVSIVNSKKSCIQLDTVRDLVIPFLLGAVVK 1119


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  934 bits (2414), Expect = 0.0
 Identities = 484/775 (62%), Positives = 587/775 (75%), Gaps = 3/775 (0%)
 Frame = -3

Query: 2318 FRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXXXXXXXXXXXXXX 2139
            FR VVVGDPN++L EIG+P   AE L +AE ++  N +                      
Sbjct: 1    FRTVVVGDPNIELGEIGIPCXXAENLHMAETLSLRNWERMTDLCDLMILQRGGILVRRNG 60

Query: 2138 XLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRVLPISSVLAINPLV 1959
             LV +S+ D LQKGDI++RPL DGD+++INRPPSIHQHSL+ALSVR+LPI+SVL+INPLV
Sbjct: 61   VLVRISVMDGLQKGDIIHRPLVDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLV 120

Query: 1958 CSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLLSLSHDSLTAAHLI 1779
            CSP RGDFDGDCLHGYIPQS+DS +EL ELVAL +QL +GQ+G+NLLSLSHDSLTAAHLI
Sbjct: 121  CSPFRGDFDGDCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLI 180

Query: 1778 LEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSLLLPPGFDYLFPSN 1599
            LE GV L++ QMQQLQMFCPRQL + AI+     +  +WTGKQLFSLLLP   +Y+FPSN
Sbjct: 181  LEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSN 240

Query: 1598 GVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQEVLCEWLSMRGLSV 1419
            GV I EGEIVTSS GSSWLRD   NLF+ L+K+   ++LDLL+AAQ VLCEWLSMRGLSV
Sbjct: 241  GVCISEGEIVTSSGGSSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSV 300

Query: 1418 SLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLSANSDGNEEALSFA 1239
            SLSDLY+++D   REN+IDEV  GLQEA+  SYI  LM+  N+++LS N + ++ ++ F 
Sbjct: 301  SLSDLYISADSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFD 360

Query: 1238 IEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAMLRAGSKGNLLKLVQ 1059
             E MSI+QQ SA +SQA  SAFK+VF DIQ+L Y YAS DN+ LAML+AGSKGNLLKLVQ
Sbjct: 361  FEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQ 420

Query: 1058 HSMCLGLQNSVTPLSFRIPHQLFCAAWNNHK--VSDCGAYDIPEHSKSYIPLAVVKSSFL 885
            H+MCLGLQ S+ P+SFR+P QL C AWNNHK  +     + +PE   SYIP AVVKSSFL
Sbjct: 421  HNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFL 480

Query: 884  TGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTVRNAYGNQLVQF 705
             GLNPLECFVHSLT RDSSFSGHADVSGT+NRKLMFFMRDLYV YDGTVRNAYGNQ+VQF
Sbjct: 481  AGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQF 540

Query: 704  S-YKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGALDLPCSALET 528
            S Y+  Q  +T   G  + SH  +HA    GGHPVGS+AACAISEAAY ALD P SALE+
Sbjct: 541  SYYEAEQIASTKVTGEALESH--NHAI---GGHPVGSLAACAISEAAYCALDQPVSALES 595

Query: 527  SPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLERLLFSDIISN 348
            SPLLNLKKILE G    +G++TAS+FLSK+LGRW HGFEYGALEVKGHLERLL S+++S 
Sbjct: 596  SPLLNLKKILESGAGSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVST 655

Query: 347  TLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSAKQKLKINLPH 168
             +I FS ET   +H  PW+CHFH+ KE VK +RL++RS++DAL M++ +A  K   +LP+
Sbjct: 656  VMICFSPETRKSTHNCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPN 715

Query: 167  VQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLPFLLRTVLR 3
            + IT K CS+A  Q E  +E+CI               D LRD+V+PFLL TV++
Sbjct: 716  LHITCKDCSVAEVQKE-KSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIK 769


>gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao]
          Length = 1484

 Score =  897 bits (2317), Expect = 0.0
 Identities = 462/850 (54%), Positives = 595/850 (70%), Gaps = 16/850 (1%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXLK------------ 2361
            T++ KKL DF+G ANELS+  L+ +                      +            
Sbjct: 263  TRVYKKLADFRGIANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLR 322

Query: 2360 YVKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXX 2181
            Y+K+++L KRNDH FRMV+ G+PNLKL EI +P  +AE+L +AE +N WN +        
Sbjct: 323  YMKDVILGKRNDHCFRMVLTGNPNLKLSEISIPCHVAERLQIAEQLNNWNEERLKACCDL 382

Query: 2180 XXXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVR 2001
                           LV +   +KLQ GD ++RPL++GDI+LINRPPSIHQHSL+ALSV+
Sbjct: 383  RLLEKGEIHVRREGRLVRIRHNEKLQVGDTIFRPLNNGDIILINRPPSIHQHSLIALSVK 442

Query: 2000 VLPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNL 1821
            VLP+SSV++INPL+CSP RGDFDGDCLHGY+PQS+ +RVEL ELV+LN+QL NGQSGRNL
Sbjct: 443  VLPVSSVVSINPLICSPFRGDFDGDCLHGYVPQSIKARVELIELVSLNRQLINGQSGRNL 502

Query: 1820 LSLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFS 1641
            LSLSHDSLTAA+L+ EDGV LN  QMQQL+MFCP     PAI+      +  WTGKQL S
Sbjct: 503  LSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPFPAIVKAPLLRSSVWTGKQLLS 562

Query: 1640 LLLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQ 1461
            +L P  FDY F  N V+IR GE+++SS GS+WLRD DGNLF  LIK+ + + LD L+AAQ
Sbjct: 563  MLFPLEFDYDFTPNDVVIRNGELISSSEGSTWLRDADGNLFQSLIKHYQGKVLDFLYAAQ 622

Query: 1460 EVLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYL 1281
            EVLCEWLSMRGLSVSLSDLY++SD   ++N++DE+ CGLQE +       LM+D N ++L
Sbjct: 623  EVLCEWLSMRGLSVSLSDLYLSSDSNSQKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFL 682

Query: 1280 SANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAM 1101
              + +  +  ++  +E M   +Q SA +SQA V +FKQVF DIQ+L Y+YA+KDN+ L M
Sbjct: 683  VGHDEEVDSFMALDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLLTM 742

Query: 1100 LRAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDC--GAYDIPEHS 927
             +AGSKGNLLKLVQHS+CLGLQ+S+ PLSFR PHQL CAAWNN K         D  E +
Sbjct: 743  FKAGSKGNLLKLVQHSLCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHGLTQKVDDTAESA 802

Query: 926  KSYIPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYD 747
            K+YIP AVV+SSF+TGLNPLE FVHS+T+RDSSFS +AD+ GT++R+LMFFMRDLY AYD
Sbjct: 803  KNYIPYAVVESSFMTGLNPLESFVHSVTSRDSSFSDNADLPGTLSRRLMFFMRDLYTAYD 862

Query: 746  GTVRNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAA 567
            GTVRN+YG+ +VQF Y   +D ++P +        SS   +  GG PVGS++ACAISEAA
Sbjct: 863  GTVRNSYGDLVVQFCYDIDKDASSPTSCAHGLISESSTIPEGIGGQPVGSLSACAISEAA 922

Query: 566  YGALDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKG 387
            Y ALD P S LETSPLLNLK+++ECG K+S+ D+T +LFLS KLGR  HG EY ALEVK 
Sbjct: 923  YSALDQPVSLLETSPLLNLKRVVECGSKRSNADQTMTLFLSNKLGRKRHGSEYAALEVKN 982

Query: 386  HLERLLFSDIISNTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQW 207
            HLERL FSDI++   I FS +    +H +PW+CHFHVCK+ +KR++L+V+SIID+L+M  
Sbjct: 983  HLERLTFSDIVTTVSIIFSPQMYRENHFTPWVCHFHVCKDTMKRRQLKVQSIIDSLHMHC 1042

Query: 206  YSAKQKLKINLPHVQITSKG--CSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMV 33
             +AK   KI+LP +QITS G  CS     NE D   CI            ++ D++RDMV
Sbjct: 1043 TTAKTMWKISLPDMQITSNGRACSHIDMPNE-DDTFCITVTIVEYSKSSHMELDVIRDMV 1101

Query: 32   LPFLLRTVLR 3
            +P+LL  V++
Sbjct: 1102 IPYLLEAVIK 1111


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  879 bits (2270), Expect = 0.0
 Identities = 452/847 (53%), Positives = 594/847 (70%), Gaps = 13/847 (1%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXLK------------ 2361
            T+  KK+VDF+GTANEL +R LD +                      K            
Sbjct: 261  TRAYKKVVDFRGTANELGSRVLDCLKISKAIYNIFVFCLNHVNYYQKKIKDTATSSSGLR 320

Query: 2360 YVKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXX 2181
            ++K+++L KR+DH FRMVVVGDPN++L EIG+P  +AE+L ++EH++ WN+ +       
Sbjct: 321  WIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYL 380

Query: 2180 XXXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVR 2001
                           LV +    +L  GD +YRPL+DGDI+L+NRPPSIHQHSL+ALSV+
Sbjct: 381  HLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDIVLVNRPPSIHQHSLIALSVK 440

Query: 2000 VLPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNL 1821
            +LP+S+VL++NPL CSP RGDFDGDCLHGY+PQS+++RVE+RELV+L+KQLTNGQSGRNL
Sbjct: 441  LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDKQLTNGQSGRNL 500

Query: 1820 LSLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFS 1641
            LSLSHDSLTAAHLILEDGV+LN  QMQQLQM    QL  PAI+         WTGKQLFS
Sbjct: 501  LSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFS 560

Query: 1640 LLLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQ 1461
            +LLPP FDY  PS+ V I +GE++ SS GS WLRD+  NLF  LI++C+ ++LD L  AQ
Sbjct: 561  ILLPPDFDYSSPSHNVFIEKGELI-SSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQ 619

Query: 1460 EVLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYL 1281
             VLCEWLS RGLSVSLSDLY++ D    EN++D++ CGLQEA+    +  LM+D ++E L
Sbjct: 620  GVLCEWLSTRGLSVSLSDLYLSVDSYSHENMMDDIFCGLQEAEETCNLKQLMVDSHKEIL 679

Query: 1280 SANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAM 1101
              N + N+  LS A+E +   +Q SA ++QA V AFK+VF DIQ+L Y+Y+ KDN+ L M
Sbjct: 680  IGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTM 739

Query: 1100 LRAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDCGAYD-IPEHSK 924
             +AGSKGNL+KLVQHSMCLGLQ+S+  LSF +PH+L CAAWN+ K+      D +P+ ++
Sbjct: 740  FKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCAAWNSQKMPRYIQKDGLPDRTQ 799

Query: 923  SYIPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDG 744
            S+IP AVV++SFL+GLNP ECF HS+TNRDSSFS +A+V GT+ RKL F MRD+Y AYDG
Sbjct: 800  SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG 859

Query: 743  TVRNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAY 564
            TVRNAYGNQLVQF Y   +  +   + N     G        GGHPVGS+AACAISEAAY
Sbjct: 860  TVRNAYGNQLVQFCYDIDRPTSESESENNNRDRGI-------GGHPVGSLAACAISEAAY 912

Query: 563  GALDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGH 384
             ALD P S LE SPLLNLK++LECG K++S  +T SLFLS+KL +  +GFEYGAL VK H
Sbjct: 913  SALDQPISLLEASPLLNLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNH 972

Query: 383  LERLLFSDIISNTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWY 204
            LER++F DI+S+ +I FS   S + H SPW+CHFHVCKEI+K++RL++ S+I +L M+  
Sbjct: 973  LERVMFKDIVSSVMIIFSPLPSRKKHFSPWVCHFHVCKEILKKRRLKMNSVIHSLNMRCD 1032

Query: 203  SAKQKLKINLPHVQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLPF 24
            S +Q+ ++NLP +QI ++ C LA    E    +C+            +Q D ++D+++ F
Sbjct: 1033 SMRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHF 1092

Query: 23   LLRTVLR 3
            LL TV+R
Sbjct: 1093 LLGTVIR 1099


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  876 bits (2263), Expect = 0.0
 Identities = 462/848 (54%), Positives = 594/848 (70%), Gaps = 14/848 (1%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALD-----------RIXXXXXXXXXXXXXXXXXXXXXLKY 2358
            T+  KK+VDF+G A ELS R LD            +                     L++
Sbjct: 256  TRAYKKMVDFRGIAKELSFRVLDCLKTSKINPDKSVNNDDYMALQRKMNDSSSSSSGLRW 315

Query: 2357 VKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXX 2178
            +K+++L KRND+SFRMVVVGDPN+K  EIG+P  IAE+L ++EH+  WN D+        
Sbjct: 316  IKDVVLGKRNDNSFRMVVVGDPNIKFSEIGIPCPIAERLQISEHLTTWNWDKLNTCCEVR 375

Query: 2177 XXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRV 1998
                          LV +    +L+ GDI+YRPL+DGD +LINRPPSIHQHSL+ALSV+V
Sbjct: 376  LLEKGDMHVRREGKLVRVRRTKELRIGDIIYRPLNDGDTVLINRPPSIHQHSLIALSVKV 435

Query: 1997 LPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLL 1818
            LP +SVLAINPL+C+P RGDFDGDCLHGY+PQSVD+RVELRELVAL+KQL N Q+GRNLL
Sbjct: 436  LPATSVLAINPLICAPFRGDFDGDCLHGYVPQSVDTRVELRELVALDKQLINVQNGRNLL 495

Query: 1817 SLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSL 1638
            S S DSL AAHL++EDGV L+  QMQQLQMFCP QL  PA+      +   WTGKQL S+
Sbjct: 496  SFSQDSLVAAHLVMEDGVLLSLQQMQQLQMFCPHQLFSPAVRKAPSLNGCAWTGKQLISM 555

Query: 1637 LLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQE 1458
            LLP GFD+  PS+ V IR+GE++ SS GS WLRDTDGNLF  LIK C+++ LD L+ AQE
Sbjct: 556  LLPRGFDHECPSSDVYIRDGELI-SSEGSFWLRDTDGNLFQSLIKQCQDQVLDFLYIAQE 614

Query: 1457 VLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLS 1278
            VLCEWLSMRGLSVSLSDLY+  D   REN++DEV  GLQ+AK    +   M+D  +++L+
Sbjct: 615  VLCEWLSMRGLSVSLSDLYLCPDSDSRENMMDEVLFGLQDAKGTCNMKQFMVDSCRDFLA 674

Query: 1277 ANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAML 1098
            +  +  + +++F +EH+   +Q SA +SQA V AFK VF DIQ L Y+YASKDNA +AM 
Sbjct: 675  SIDEDEQYSVNFDVEHLCHEKQRSAALSQASVDAFKHVFRDIQTLGYKYASKDNALMAMF 734

Query: 1097 RAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDCGAYDIPEHSKSY 918
            ++GSKGNLLK+VQHSMCLGLQ+S+ PLSFR+P QL C AWN  K     A +  E ++SY
Sbjct: 735  KSGSKGNLLKVVQHSMCLGLQHSLVPLSFRMPLQLSCDAWNKQK-----AENAVECARSY 789

Query: 917  IPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTV 738
            IP AVV+  FLTGLNPLECFVHS+T+R+SSFS +AD+ GT+ R+LMFFMRD++ AYDG+V
Sbjct: 790  IPSAVVEGCFLTGLNPLECFVHSVTSRESSFSDNADLPGTLTRRLMFFMRDVHAAYDGSV 849

Query: 737  RNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDI---QGGHPVGSVAACAISEAA 567
            R+AYGNQL+QFSY   +       G    ++G++   D      G PVGS+AAC+ISEAA
Sbjct: 850  RSAYGNQLIQFSYNIDE-------GRSAETYGTAKIVDNYDGMAGKPVGSLAACSISEAA 902

Query: 566  YGALDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKG 387
            Y ALD P S LE SPLLNLK +LECG+KKS+  ++ SLFLS+KLGR  HGFEYGAL+V+ 
Sbjct: 903  YSALDQPISLLEKSPLLNLKNVLECGLKKSNAHKSMSLFLSEKLGRRRHGFEYGALKVQD 962

Query: 386  HLERLLFSDIISNTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQW 207
            HLERLLFSDI+S + I FSS++ +++  SPW+CHFHV KEI+K++ L V SII+ L    
Sbjct: 963  HLERLLFSDIVSVSRIIFSSQSESKTCFSPWVCHFHVYKEIMKKRNLNVDSIINIL---- 1018

Query: 206  YSAKQKLKINLPHVQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLP 27
             + + K   NLP+VQI+ K CS+A    E +  LCI             +   ++D+++P
Sbjct: 1019 -NGRCKSNTNLPNVQISCKSCSIADNHREKEETLCITVTIVERSKNSSTRLATIQDLMIP 1077

Query: 26   FLLRTVLR 3
            FLL TVL+
Sbjct: 1078 FLLETVLK 1085


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  863 bits (2229), Expect = 0.0
 Identities = 459/844 (54%), Positives = 583/844 (69%), Gaps = 10/844 (1%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARA----------LDRIXXXXXXXXXXXXXXXXXXXXXLKYV 2355
            T+  KK+VD++G   ELS             LD+                      L+++
Sbjct: 254  TRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWI 313

Query: 2354 KEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXX 2175
            K+++L KRND  FRMVV GDPN+KL EIG+P Q+AE+L ++E +N WN +          
Sbjct: 314  KDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCQVAERLQISERLNSWNWERLSVCISFRL 373

Query: 2174 XXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRVL 1995
                         LV +   D L+ GDI+YRPL+DGDI+LINRPPSIH HSL+AL+V+VL
Sbjct: 374  LEKGELYVCRKGGLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSIHPHSLIALTVKVL 433

Query: 1994 PISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLLS 1815
            PISSV+ INPL CSP  GDFDGDCLHGYIPQ++ +RVEL ELVAL+KQL N QSGRNLLS
Sbjct: 434  PISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIGARVELTELVALDKQLINQQSGRNLLS 493

Query: 1814 LSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSLL 1635
            L  DSLTAAHL++EDGV L+ +QMQQLQMFCP +   P I   SK     W+GKQLFS+L
Sbjct: 494  LGQDSLTAAHLLMEDGVLLSHLQMQQLQMFCPHRFLSPDIFKISKDSV--WSGKQLFSML 551

Query: 1634 LPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQEV 1455
            LPP F+Y FPS  V I  G+++ S+ GSSWLRD +GNLF +LIK  +++ LD L+AAQEV
Sbjct: 552  LPPDFEYTFPSKDVYISGGKLI-SAEGSSWLRDYEGNLFQYLIKRYRDKVLDFLYAAQEV 610

Query: 1454 LCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLSA 1275
            LCEWLS+RG++VSLSDLY+AS  C R+ L+DE+  GL+EA+       LM+D +  +L +
Sbjct: 611  LCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMS 670

Query: 1274 NSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAMLR 1095
              D +E   S   EH+S  +Q SA +SQA V AFK VF DIQ+LAY+Y SKDN+ L M +
Sbjct: 671  AKD-SESTRSLQGEHLSYEKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLGMFK 729

Query: 1094 AGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDCGAYDIPEHSKSYI 915
            AGSKGNLLKLVQHS+CLGLQ+S+ PLSFR PH+L CAAWN  +     A D  E +KSYI
Sbjct: 730  AGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLR-----AGDNTECAKSYI 784

Query: 914  PLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTVR 735
            P AVV++SFLTGLNPLECF+HS+T+RDSSFS +AD+ GT+ R+LMFFMRDL  AYDGTVR
Sbjct: 785  PSAVVENSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVR 844

Query: 734  NAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGAL 555
            NAYGNQ+VQFSY               +  G+S  +   G  PVGS++ACAISEAAY AL
Sbjct: 845  NAYGNQIVQFSY---------------NIEGTSTPTGEIGDQPVGSLSACAISEAAYSAL 889

Query: 554  DLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLER 375
            D P S LETSPLLNLK +LECG KKS+ D+T SLFLS KLG+  HGFEYGALEVK HLE 
Sbjct: 890  DQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVKNHLEC 949

Query: 374  LLFSDIISNTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSAK 195
            L+ SDI+S ++I +S +T +  H SPWICHFHV KEI+KR  L+  SIID+LY Q  +A+
Sbjct: 950  LMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIIDSLYRQCKAAR 1009

Query: 194  QKLKINLPHVQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLPFLLR 15
             +LKI++P + I++K CS    Q E +   C+            +  + ++  V+PFLL+
Sbjct: 1010 TELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETIQMWVMPFLLK 1069

Query: 14   TVLR 3
            TV++
Sbjct: 1070 TVVK 1073


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  860 bits (2222), Expect = 0.0
 Identities = 453/851 (53%), Positives = 582/851 (68%), Gaps = 17/851 (1%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXLK----------YV 2355
            T+  +KLVDF+GTANEL +R LD +                     +K          ++
Sbjct: 240  TRAYRKLVDFRGTANELGSRVLDCLKISKINKEKTGRDSISVEQQKIKDSPSRTSGLRWI 299

Query: 2354 KEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXX 2175
            K+++L KR+DH FRMVVVGDPN+KL EIG+PR IAEK+ ++E++N++N ++         
Sbjct: 300  KDVVLGKRSDHCFRMVVVGDPNIKLSEIGIPRHIAEKMQISENLNQYNFEKLFVFCQLRL 359

Query: 2174 XXXXXXXXXXXXXL--VHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVR 2001
                            V +   ++L+ GDI+YR LS+GD++LINRPPSIHQHSL+AL+ +
Sbjct: 360  GPDGRGDIHVRRNDSLVRIRKPEELEMGDIIYRALSNGDVVLINRPPSIHQHSLIALTTK 419

Query: 2000 VLPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNL 1821
            VLP++SV++INPL CSP +GDFDGDCLHGY+PQSV++RVEL ELVAL+KQL NGQSG NL
Sbjct: 420  VLPVNSVVSINPLCCSPFQGDFDGDCLHGYVPQSVETRVELTELVALDKQLVNGQSGTNL 479

Query: 1820 LSLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFS 1641
            +SLS DSLTA +LI EDG  +NK QMQQL M CP +L LPA+I     ++  WT KQ+ S
Sbjct: 480  MSLSQDSLTAFYLITEDGTLMNKFQMQQLNMLCPHELPLPAVIKHPSGNSVSWTAKQIVS 539

Query: 1640 LLLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQ 1461
            + LP  FDY FPSNGV I  GE++ SS GSSWLRDT GNLF  L ++C  + LD+ F+AQ
Sbjct: 540  MFLPADFDYAFPSNGVYISNGELIASSEGSSWLRDTSGNLFQSLTEHCHGQVLDIFFSAQ 599

Query: 1460 EVLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYL 1281
             VLCEWLSMRGLSVSLSDLY+ASD C R+NL++E+  GLQEA+    I  LMLD  Q++L
Sbjct: 600  GVLCEWLSMRGLSVSLSDLYLASDTCSRKNLMEEIFYGLQEAEEACTIRQLMLDSFQDFL 659

Query: 1280 SANSDGNEEA-LSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLA 1104
                +   ++ L+F  EH    +Q +A +SQ  V A K+ F D+Q+LAY+YA  DN+ LA
Sbjct: 660  MGYDENKSQSPLTFGSEHFCYQKQKTAALSQVTVDAIKEGFRDVQNLAYKYAGVDNSLLA 719

Query: 1103 MLRAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHK----VSDCGAYDIP 936
            M +AGSKGN+LKLVQH MCLGLQ+S+ PLSF+ P+QL C AWN+ K    V + G     
Sbjct: 720  MFKAGSKGNMLKLVQHCMCLGLQHSLVPLSFKFPNQLSCDAWNDQKARGIVQEVGRNF-- 777

Query: 935  EHSKSYIPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYV 756
            E  +SYIP AVVKSSFLTGLNP+ECFVHS+T+RD SFS +A++ GT+NRKLM+FMRDL+ 
Sbjct: 778  ESIESYIPSAVVKSSFLTGLNPVECFVHSVTSRDGSFSNNAELPGTLNRKLMYFMRDLHT 837

Query: 755  AYDGTVRNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAIS 576
            AYDGTVRNAYGNQL+QFSY +  +G +  +     S+  S   +  G  PVG+++ACAIS
Sbjct: 838  AYDGTVRNAYGNQLIQFSY-DIDEGISTADSTTNSSYAKS-VINCGGSQPVGALSACAIS 895

Query: 575  EAAYGALDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALE 396
            EAAY ALD P S LE SPLLNLK ILECG K+SS  +T SLFLS KL R  HGFEYGALE
Sbjct: 896  EAAYSALDQPVSLLEASPLLNLKNILECGSKRSSAKQTMSLFLSDKLDRHRHGFEYGALE 955

Query: 395  VKGHLERLLFSDIISNTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALY 216
            VK HLE L FSDI+S  +I FSS++ ++   SPW+ HFH+ KEIV+R+RL V+SII+ALY
Sbjct: 956  VKNHLEGLNFSDIVSTVMIMFSSQSGSKMRFSPWVSHFHISKEIVRRRRLNVQSIIEALY 1015

Query: 215  MQWYSAKQKLKINLPHVQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDM 36
                SA   LKI      I  + C      N+     CI             + D  R +
Sbjct: 1016 AMCNSAGADLKI-----MIIGRECDCCSTPND---TFCISVTLTEKYNNSSKELDKTRVL 1067

Query: 35   VLPFLLRTVLR 3
            V+PFLL+TV++
Sbjct: 1068 VIPFLLKTVVK 1078


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  860 bits (2221), Expect = 0.0
 Identities = 458/854 (53%), Positives = 592/854 (69%), Gaps = 20/854 (2%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXL-----------KY 2358
            T+ CKKLVDF+GTANELS+R LD +                                 ++
Sbjct: 257  TRACKKLVDFRGTANELSSRVLDCLRFSKINPDKTPSNVFTEIQLRKVGENACNSSGLRW 316

Query: 2357 VKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXX 2178
            +K+I+L KRND SFR VVVGDP+L+L EIG+P QIAE L V+E+VN  N           
Sbjct: 317  MKDIVLGKRNDSSFRTVVVGDPDLELSEIGLPCQIAEGLQVSEYVNRQNKQNLLYCCELR 376

Query: 2177 XXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRV 1998
                           V L  ++ +Q GDI YRPL DGD +LINRPPSIHQHS++AL+VRV
Sbjct: 377  LLEKGQINVCRKGRPVVLFKKEDVQIGDIFYRPLVDGDRVLINRPPSIHQHSMIALTVRV 436

Query: 1997 LPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLL 1818
            LPISSV++INPL CSPLRGDFDGDCLHGYIPQSV +RVEL ELVAL+KQL NGQSGRNLL
Sbjct: 437  LPISSVVSINPLCCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDKQLINGQSGRNLL 496

Query: 1817 SLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSL 1638
            SLS DSLTAA+L+LEDGV LN  QMQQLQM C R+L  PAI+    ++T  W+GKQLFS+
Sbjct: 497  SLSQDSLTAAYLLLEDGVLLNVYQMQQLQMHCSRKLIPPAIVKAPSSNTSCWSGKQLFSM 556

Query: 1637 LLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQE 1458
            L+P  FDY FPS+GV + +GE+++ S  S WLRD+D N+F  L+++ + ++LD+L  AQ+
Sbjct: 557  LMPSSFDYAFPSDGVFVCDGELISCSEASGWLRDSDNNVFQSLVEHFQGKTLDILHGAQK 616

Query: 1457 VLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLS 1278
             LCEWLSM G SVSLSDLY++SD   R+N+I+E+S GLQEA+     + L++D   ++LS
Sbjct: 617  ALCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEISYGLQEAEQACDFNQLLVDYCCDFLS 676

Query: 1277 ANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAML 1098
             +    E  ++  ++ ++  +Q SA +SQA V AF+QVF +IQ LA +YA KDNAFLAM 
Sbjct: 677  GSLQEIENLVAVDVDCLNYERQISAALSQASVDAFRQVFRNIQSLADKYACKDNAFLAMF 736

Query: 1097 RAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDCGAYDIPEHSKSY 918
            +AGSKGNLLKLVQHSMCLGLQ+S+  L ++IP +L CAAWN+ K     + D  E  +SY
Sbjct: 737  KAGSKGNLLKLVQHSMCLGLQHSLVRLPYKIPRKLSCAAWNSQKGMQIFS-DTVEPVQSY 795

Query: 917  IPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTV 738
            IP AVV+SSFLTGLNPLECFVHS+TNRDSSFS +AD+ GT+ R+LMFFMRD+Y AYDGTV
Sbjct: 796  IPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTV 855

Query: 737  RNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGA 558
            RN YGNQL+QFSY   +D           S  S    D  GG PVG+++ACA+SEAAY A
Sbjct: 856  RNLYGNQLIQFSYDAEEDS----------SCDSHFREDTIGGEPVGTLSACAVSEAAYSA 905

Query: 557  LDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLE 378
            L  P S LE SPLLNLK +LECG +K  GD+T SLFLS+K+G+  +GFEY ALEVK +LE
Sbjct: 906  LSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLE 965

Query: 377  RLLFSDIISNTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSA 198
            RL+FSDI+S  +I F+ ++ +    SPW+CHFH+ KE V R+ L V SIID+LY ++ S 
Sbjct: 966  RLMFSDIVSTVMIIFTPQSRSLEKYSPWVCHFHLDKENVTRRNLEVHSIIDSLYQRYDSL 1025

Query: 197  KQKLKINLPHVQITSKGCSL---------AVKQNEMDAELCIXXXXXXXXXXXXVQCDIL 45
            ++  K+ LP+++I++K CS+              E+D E CI            VQ D++
Sbjct: 1026 RKGSKVTLPNLKISTKKCSVHYMAKEGGETSVDKEIDGEDCI-TVTIVENYMNSVQLDVV 1084

Query: 44   RDMVLPFLLRTVLR 3
            R+M++PFLLRT ++
Sbjct: 1085 RNMMIPFLLRTAIK 1098


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  858 bits (2218), Expect = 0.0
 Identities = 458/844 (54%), Positives = 581/844 (68%), Gaps = 10/844 (1%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARA----------LDRIXXXXXXXXXXXXXXXXXXXXXLKYV 2355
            T+  KK+VD++G   ELS             LD+                      L+++
Sbjct: 254  TRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWI 313

Query: 2354 KEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXX 2175
            K+++L KRND  FRMVV GDPN+KL EIG+P  +AE+L ++E +N WN +          
Sbjct: 314  KDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCHVAERLQISERLNSWNWERLSVCTSFRL 373

Query: 2174 XXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRVL 1995
                         LV +   D L+ GDI+YRPL+DGDI+LINRPPSIH HSL+AL+V+VL
Sbjct: 374  LEKGELYVCRKGGLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSIHPHSLIALTVKVL 433

Query: 1994 PISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLLS 1815
            PISSV+ INPL CSP  GDFDGDCLHGYIPQ++ +RVEL ELVAL+KQL N QSGRNLLS
Sbjct: 434  PISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIGARVELTELVALDKQLINQQSGRNLLS 493

Query: 1814 LSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSLL 1635
            L  DSLTAAHL++ED V L+ +QMQQLQMFCP +   P I   SK     W+GKQLFS+L
Sbjct: 494  LGQDSLTAAHLLMEDSVLLSHLQMQQLQMFCPHRFLSPDIFKISKDSV--WSGKQLFSML 551

Query: 1634 LPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQEV 1455
            LPP F+Y FPS  V I  G+++ S+ GSSWLRD +GNLF +LIK  +++ LD L+AAQEV
Sbjct: 552  LPPDFEYTFPSKDVYISGGKLI-SAEGSSWLRDYEGNLFQYLIKRYQDKVLDFLYAAQEV 610

Query: 1454 LCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLSA 1275
            LCEWLS+RG++VSLSDLY+AS  C R+ L+DE+  GL+EA+       LM+D +  +L +
Sbjct: 611  LCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMS 670

Query: 1274 NSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAMLR 1095
              D +E   S   EH+S  +Q SA +SQA V AFK VF DIQ+LAY+Y SKDN+ LAM +
Sbjct: 671  AED-SESTRSLQGEHLSYEKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFK 729

Query: 1094 AGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDCGAYDIPEHSKSYI 915
            AGSKGNLLKLVQHS+CLGLQ+S+ PLSFR PH+L CAAWN  +     A D  E +KSYI
Sbjct: 730  AGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLR-----AGDNTECAKSYI 784

Query: 914  PLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTVR 735
            P AVV +SFLTGLNPLECF+HS+T+RDSSFS +AD+ GT+ R+LMFFMRDL  AYDGTVR
Sbjct: 785  PSAVVANSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVR 844

Query: 734  NAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGAL 555
            NAYGNQ+VQFSY               +  G+S  +   GG  VGS++ACAISEAAY AL
Sbjct: 845  NAYGNQIVQFSY---------------NIEGTSTPTGEIGGQSVGSLSACAISEAAYSAL 889

Query: 554  DLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLER 375
            D P S LETSPLLNLK +LECG KKS+ D+T SLFLS KLG+  HGFEYGALEVK HLE 
Sbjct: 890  DQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVKNHLEC 949

Query: 374  LLFSDIISNTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSAK 195
            L+ SDI+S ++I +S +T +  H SPWICHFHV KEI+KR  L+  SIID+LY Q  +A+
Sbjct: 950  LMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIIDSLYRQCKAAR 1009

Query: 194  QKLKINLPHVQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLPFLLR 15
             +LKI++P + I++K CS    Q E +   C+            +  + ++  V+PFLL+
Sbjct: 1010 TELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETIQMWVMPFLLK 1069

Query: 14   TVLR 3
            TV++
Sbjct: 1070 TVVK 1073


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  858 bits (2218), Expect = 0.0
 Identities = 458/844 (54%), Positives = 581/844 (68%), Gaps = 10/844 (1%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARA----------LDRIXXXXXXXXXXXXXXXXXXXXXLKYV 2355
            T+  KK+VD++G   ELS             LD+                      L+++
Sbjct: 292  TRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWI 351

Query: 2354 KEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXX 2175
            K+++L KRND  FRMVV GDPN+KL EIG+P  +AE+L ++E +N WN +          
Sbjct: 352  KDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCHVAERLQISERLNSWNWERLSVCTSFRL 411

Query: 2174 XXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRVL 1995
                         LV +   D L+ GDI+YRPL+DGDI+LINRPPSIH HSL+AL+V+VL
Sbjct: 412  LEKGELYVCRKGGLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSIHPHSLIALTVKVL 471

Query: 1994 PISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLLS 1815
            PISSV+ INPL CSP  GDFDGDCLHGYIPQ++ +RVEL ELVAL+KQL N QSGRNLLS
Sbjct: 472  PISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIGARVELTELVALDKQLINQQSGRNLLS 531

Query: 1814 LSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSLL 1635
            L  DSLTAAHL++ED V L+ +QMQQLQMFCP +   P I   SK     W+GKQLFS+L
Sbjct: 532  LGQDSLTAAHLLMEDSVLLSHLQMQQLQMFCPHRFLSPDIFKISKDSV--WSGKQLFSML 589

Query: 1634 LPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQEV 1455
            LPP F+Y FPS  V I  G+++ S+ GSSWLRD +GNLF +LIK  +++ LD L+AAQEV
Sbjct: 590  LPPDFEYTFPSKDVYISGGKLI-SAEGSSWLRDYEGNLFQYLIKRYQDKVLDFLYAAQEV 648

Query: 1454 LCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLSA 1275
            LCEWLS+RG++VSLSDLY+AS  C R+ L+DE+  GL+EA+       LM+D +  +L +
Sbjct: 649  LCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMS 708

Query: 1274 NSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAMLR 1095
              D +E   S   EH+S  +Q SA +SQA V AFK VF DIQ+LAY+Y SKDN+ LAM +
Sbjct: 709  AED-SESTRSLQGEHLSYEKQRSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFK 767

Query: 1094 AGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDCGAYDIPEHSKSYI 915
            AGSKGNLLKLVQHS+CLGLQ+S+ PLSFR PH+L CAAWN  +     A D  E +KSYI
Sbjct: 768  AGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLR-----AGDNTECAKSYI 822

Query: 914  PLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTVR 735
            P AVV +SFLTGLNPLECF+HS+T+RDSSFS +AD+ GT+ R+LMFFMRDL  AYDGTVR
Sbjct: 823  PSAVVANSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVR 882

Query: 734  NAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGAL 555
            NAYGNQ+VQFSY               +  G+S  +   GG  VGS++ACAISEAAY AL
Sbjct: 883  NAYGNQIVQFSY---------------NIEGTSTPTGEIGGQSVGSLSACAISEAAYSAL 927

Query: 554  DLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLER 375
            D P S LETSPLLNLK +LECG KKS+ D+T SLFLS KLG+  HGFEYGALEVK HLE 
Sbjct: 928  DQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVKNHLEC 987

Query: 374  LLFSDIISNTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSAK 195
            L+ SDI+S ++I +S +T +  H SPWICHFHV KEI+KR  L+  SIID+LY Q  +A+
Sbjct: 988  LMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIIDSLYRQCKAAR 1047

Query: 194  QKLKINLPHVQITSKGCSLAVKQNEMDAELCIXXXXXXXXXXXXVQCDILRDMVLPFLLR 15
             +LKI++P + I++K CS    Q E +   C+            +  + ++  V+PFLL+
Sbjct: 1048 TELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETIQMWVMPFLLK 1107

Query: 14   TVLR 3
            TV++
Sbjct: 1108 TVVK 1111


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  855 bits (2210), Expect = 0.0
 Identities = 458/855 (53%), Positives = 592/855 (69%), Gaps = 21/855 (2%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXL-----------KY 2358
            T+ CKKLVDF+GTANELS+R LD +                                 ++
Sbjct: 257  TRACKKLVDFRGTANELSSRVLDCLRFSKINPDKTPSNVFTEIQLRKVGENACNSSGLRW 316

Query: 2357 VKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXX 2178
            +K+I+L KRND SFR VVVGDP+L+L EIG+P QIAE L V+E+VN  N           
Sbjct: 317  MKDIVLGKRNDSSFRTVVVGDPDLELSEIGLPCQIAEGLQVSEYVNRQNKQNLLYCCELR 376

Query: 2177 XXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRV 1998
                           V L  ++ +Q GDI YRPL DGD +LINRPPSIHQHS++AL+VRV
Sbjct: 377  LLEKGQINVCRKGRPVVLFKKEDVQIGDIFYRPLVDGDRVLINRPPSIHQHSMIALTVRV 436

Query: 1997 LPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLL 1818
            LPISSV++INPL CSPLRGDFDGDCLHGYIPQSV +RVEL ELVAL+KQL NGQSGRNLL
Sbjct: 437  LPISSVVSINPLCCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDKQLINGQSGRNLL 496

Query: 1817 SLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSL 1638
            SLS DSLTAA+L+LEDGV LN  QMQQLQM C R+L  PAI+    ++T  W+GKQLFS+
Sbjct: 497  SLSQDSLTAAYLLLEDGVLLNVYQMQQLQMHCSRKLIPPAIVKAPSSNTSCWSGKQLFSM 556

Query: 1637 LLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQE 1458
            L+P  FDY FPS+GV + +GE+++ S  S WLRD+D N+F  L+++ + ++LD+L  AQ+
Sbjct: 557  LMPSSFDYAFPSDGVFVCDGELISCSEASGWLRDSDNNVFQSLVEHFQGKTLDILHGAQK 616

Query: 1457 VLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLS 1278
             LCEWLSM G SVSLSDLY++SD   R+N+I+E+S GLQEA+     + L++D   ++LS
Sbjct: 617  ALCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEISYGLQEAEQACDFNQLLVDYCCDFLS 676

Query: 1277 ANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAML 1098
             +    E  ++  ++ ++  +Q SA +SQA V AF+QVF +IQ LA +YA KDNAFLAM 
Sbjct: 677  GSLQEIENLVAVDVDCLNYERQISAALSQASVDAFRQVFRNIQSLADKYACKDNAFLAMF 736

Query: 1097 RAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDCGAYDIPEHSKSY 918
            +AGSKGNLLKLVQHSMCLGLQ+S+  L ++IP +L CAAWN+ K     + D  E  +SY
Sbjct: 737  KAGSKGNLLKLVQHSMCLGLQHSLVRLPYKIPRKLSCAAWNSQKGMQIFS-DTVEPVQSY 795

Query: 917  IPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTV 738
            IP AVV+SSFLTGLNPLECFVHS+TNRDSSFS +AD+ GT+ R+LMFFMRD+Y AYDGTV
Sbjct: 796  IPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTV 855

Query: 737  RNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGA 558
            RN YGNQL+QFSY   +D           S  S    D  GG PVG+++ACA+SEAAY A
Sbjct: 856  RNLYGNQLIQFSYDAEEDS----------SCDSHFREDTIGGEPVGTLSACAVSEAAYSA 905

Query: 557  LDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLE 378
            L  P S LE SPLLNLK +LECG +K  GD+T SLFLS+K+G+  +GFEY ALEVK +LE
Sbjct: 906  LSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLE 965

Query: 377  RLLFSDIISNTLISFSSETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSA 198
            RL+FSDI+S  +I F+ ++ +    SPW+CHFH+ KE V R+ L V SIID+LY ++ S 
Sbjct: 966  RLMFSDIVSTVMIIFTPQSRSLEKYSPWVCHFHLDKENVTRRNLEVHSIIDSLYQRYDSL 1025

Query: 197  KQKLKINLPHVQI-TSKGCSL---------AVKQNEMDAELCIXXXXXXXXXXXXVQCDI 48
            ++  K+ LP+++I T++ CS+              E+D E CI            VQ D+
Sbjct: 1026 RKGSKVTLPNLKISTNRKCSVHYMAKEGGETSVDKEIDGEDCI-TVTIVENYMNSVQLDV 1084

Query: 47   LRDMVLPFLLRTVLR 3
            +R+M++PFLLRT ++
Sbjct: 1085 VRNMMIPFLLRTAIK 1099


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score =  848 bits (2190), Expect = 0.0
 Identities = 456/858 (53%), Positives = 594/858 (69%), Gaps = 24/858 (2%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXL-----------KY 2358
            T+ CKKLVDF+GTANELS+R LD +                                 ++
Sbjct: 246  TRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRW 305

Query: 2357 VKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXX 2178
            +K+++L KRND SFR VVVGDP+L+L EIG+P  IAE L V+E+VN  N ++        
Sbjct: 306  IKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELH 365

Query: 2177 XXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRV 1998
                          +VHL  ++ LQ GD  YRPL+DGD +LINRPPSIHQHS+++L+VRV
Sbjct: 366  LLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRV 425

Query: 1997 LPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLL 1818
            LPISSV+ INPL CSPLRGDFDGDCLHGYIPQSV +R+EL ELVAL++QL NGQSGRNLL
Sbjct: 426  LPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLL 485

Query: 1817 SLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQL--PAIISKSKADTYFWTGKQLF 1644
            SLS DSLTAA+L++EDGV LN  QMQQLQM      +L  PA++    +++  W GKQLF
Sbjct: 486  SLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLIPPAVVKAPSSNSSLWNGKQLF 545

Query: 1643 SLLLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAA 1464
            S+LLP  FDY FPS+GV++ +GE+V+SS  S WLRD+D N+F  L+++ + ++L+ L+AA
Sbjct: 546  SMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAA 605

Query: 1463 QEVLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEY 1284
            Q+VLCEWLSM G SVSLSDLY++SD   REN+I+E+  GLQ+A+       L+LD   ++
Sbjct: 606  QKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLDYYCDF 665

Query: 1283 LSANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLA 1104
            LS +   +E A++   + ++  +Q SA +SQA V AF+QVF +IQ LA +YA K N+FLA
Sbjct: 666  LSGSLQESENAITVNADRLNYERQISASLSQASVDAFRQVFRNIQSLADKYACKGNSFLA 725

Query: 1103 MLRAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDC--GAYDIPEH 930
            M +AGSKGNLLKLVQHSMCLG+QNS+  LS+R+P  L CA WN+ K  D    +    E 
Sbjct: 726  MFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCADWNSQKWVDSIQMSSGTLES 785

Query: 929  SKSYIPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAY 750
             +SYIP AVV+SSFLTGLNPLECFVHS+TNRDSSFS HAD+ GT+ R+LMFFMRDLY AY
Sbjct: 786  VQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAY 845

Query: 749  DGTVRNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEA 570
            DGTVRN YGNQL+QFSY   +D +  CN                GG  VG+++ACAISEA
Sbjct: 846  DGTVRNLYGNQLIQFSYDIEEDSS--CN--------KGFQQYALGGESVGAISACAISEA 895

Query: 569  AYGALDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVK 390
            AY AL  P S LETSPLLNLK +LECG +K +GD+T SLFLS+KLG+  HGFEY ALEVK
Sbjct: 896  AYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAALEVK 955

Query: 389  GHLERLLFSDIISNTLISFSSETS-TRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYM 213
             +LERLLFS+I+S  +I F+   S ++   SPW+CHFH+ KEIV R++L+V SIID+LY 
Sbjct: 956  NYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQ 1015

Query: 212  QWYSAKQKLKINLPHVQITSKGCSL--AVKQNE------MDAELCIXXXXXXXXXXXXVQ 57
            ++YS ++  K+   +++I+S+ CS    VK+ E       + + CI            +Q
Sbjct: 1016 RYYSQRKDSKVCFTNLKISSRKCSADSMVKEGEDTSIDKEEGDDCI-MVTIVENSKNPIQ 1074

Query: 56   CDILRDMVLPFLLRTVLR 3
             D +RD+V+PFLL T ++
Sbjct: 1075 LDSVRDLVIPFLLGTAIQ 1092


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
            max]
          Length = 1369

 Score =  846 bits (2186), Expect = 0.0
 Identities = 453/859 (52%), Positives = 595/859 (69%), Gaps = 25/859 (2%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXL-----------KY 2358
            T+ CKKLVDF+GT NELS+R LD +                                 ++
Sbjct: 160  TRSCKKLVDFRGTPNELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENACNSSGLRW 219

Query: 2357 VKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXX 2178
            +K+++L KRND S R VVVGDP+L+L E+G+P  IAE L V+E+VN  N ++        
Sbjct: 220  IKDVVLGKRNDSSLRTVVVGDPDLELSEVGIPCHIAESLQVSEYVNRQNREKLLYCCELR 279

Query: 2177 XXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRV 1998
                           VHL  ++ LQ GD +YRPL+DGD +LINRPPSIHQHS++AL+VRV
Sbjct: 280  LLEKGKIDVCRNGSKVHLYKKEDLQIGDKIYRPLADGDKVLINRPPSIHQHSMIALTVRV 339

Query: 1997 LPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLL 1818
            LPISSV+ INPL CSPLRGDFDGDCLHGYIPQSV +R+EL ELVAL++QL NGQSGRNLL
Sbjct: 340  LPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLL 399

Query: 1817 SLSHDSLTAAHLILEDGVTLNKVQMQQLQMFC--PRQLQLPAIISKSKADTYFWTGKQLF 1644
            SLS DSLTAA+L++EDGV LN  QMQQLQM     ++L  PA++    +++  W+GKQ+F
Sbjct: 400  SLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISDKRLIPPAVVKAPSSNSSLWSGKQIF 459

Query: 1643 SLLLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAA 1464
            S+LLP  FDY FPS+GV++ +GE+V+SS  S WLRD+D N+F  L+++ + ++L+ L+ A
Sbjct: 460  SMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYTA 519

Query: 1463 QEVLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEY 1284
            Q+VLCEWLSM G SVSLSDLY++SD   R+N+I+E+  GLQ+A+       L+LDC  ++
Sbjct: 520  QKVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEIFYGLQDAEQACNFKQLLLDCYCDF 579

Query: 1283 LSANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLA 1104
            LS +   +E A++   + ++  +Q SA +SQA V AF+QVF +IQ LA +YA KDNAFLA
Sbjct: 580  LSGSIQESENAITVDADRLNYERQISAALSQASVDAFRQVFRNIQSLADKYACKDNAFLA 639

Query: 1103 MLRAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDC--GAYDIPEH 930
            M +AGSKGNLLKLVQHSMCLG+QNS+  LS+R+P  L CAAWN+ K  D    +    E 
Sbjct: 640  MFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCAAWNSQKWLDSIQMSSGTLES 699

Query: 929  SKSYIPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAY 750
             +SYIP AVV+SSFLTGLNPLECFVHS+TNRDSSFS HAD+ GT+ R+LMFFMRDL+ AY
Sbjct: 700  VQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTRRLMFFMRDLHDAY 759

Query: 749  DGTVRNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEA 570
            DGTVRN YGNQL+QFSY   +D           S          GG PVG+++ACAISEA
Sbjct: 760  DGTVRNLYGNQLIQFSYDIEEDS----------SCDKGFQEYAIGGEPVGAISACAISEA 809

Query: 569  AYGALDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVK 390
            AY AL  P S LETSPLLNLK +LECG +K +GD+T SLFLS+KLG+  HGFEY ALEVK
Sbjct: 810  AYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAALEVK 869

Query: 389  GHLERLLFSDIISNTLISFS-SETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYM 213
             +LERLLFS+I+S  +I F+  + S++   SPW+CHFH+ KEIV R++L+V SIID+LY 
Sbjct: 870  NYLERLLFSNIVSTVMIIFTPHDGSSQEKYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQ 929

Query: 212  QWYSAKQKLKINLPHVQITS-KGCSL--AVKQNE------MDAELCIXXXXXXXXXXXXV 60
            ++YS ++  K+   +++I+S + CS     K+ E       + + CI            +
Sbjct: 930  RYYSQRKDSKVCFTNLKISSNRKCSADSMAKEGEDTSIDKKEGDDCI-TVTIVENSKNPI 988

Query: 59   QCDILRDMVLPFLLRTVLR 3
            Q D +RD+V+PFLL T ++
Sbjct: 989  QLDSVRDLVIPFLLGTAIK 1007


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
            [Glycine max]
          Length = 1381

 Score =  843 bits (2178), Expect = 0.0
 Identities = 456/859 (53%), Positives = 594/859 (69%), Gaps = 25/859 (2%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXL-----------KY 2358
            T+ CKKLVDF+GTANELS+R LD +                                 ++
Sbjct: 169  TRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRW 228

Query: 2357 VKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXX 2178
            +K+++L KRND SFR VVVGDP+L+L EIG+P  IAE L V+E+VN  N ++        
Sbjct: 229  IKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELH 288

Query: 2177 XXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRV 1998
                          +VHL  ++ LQ GD  YRPL+DGD +LINRPPSIHQHS+++L+VRV
Sbjct: 289  LLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRV 348

Query: 1997 LPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLL 1818
            LPISSV+ INPL CSPLRGDFDGDCLHGYIPQSV +R+EL ELVAL++QL NGQSGRNLL
Sbjct: 349  LPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLL 408

Query: 1817 SLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQL--PAIISKSKADTYFWTGKQLF 1644
            SLS DSLTAA+L++EDGV LN  QMQQLQM      +L  PA++    +++  W GKQLF
Sbjct: 409  SLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLIPPAVVKAPSSNSSLWNGKQLF 468

Query: 1643 SLLLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAA 1464
            S+LLP  FDY FPS+GV++ +GE+V+SS  S WLRD+D N+F  L+++ + ++L+ L+AA
Sbjct: 469  SMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAA 528

Query: 1463 QEVLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEY 1284
            Q+VLCEWLSM G SVSLSDLY++SD   REN+I+E+  GLQ+A+       L+LD   ++
Sbjct: 529  QKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLDYYCDF 588

Query: 1283 LSANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLA 1104
            LS +   +E A++   + ++  +Q SA +SQA V AF+QVF +IQ LA +YA K N+FLA
Sbjct: 589  LSGSLQESENAITVNADRLNYERQISASLSQASVDAFRQVFRNIQSLADKYACKGNSFLA 648

Query: 1103 MLRAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDC--GAYDIPEH 930
            M +AGSKGNLLKLVQHSMCLG+QNS+  LS+R+P  L CA WN+ K  D    +    E 
Sbjct: 649  MFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCADWNSQKWVDSIQMSSGTLES 708

Query: 929  SKSYIPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAY 750
             +SYIP AVV+SSFLTGLNPLECFVHS+TNRDSSFS HAD+ GT+ R+LMFFMRDLY AY
Sbjct: 709  VQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAY 768

Query: 749  DGTVRNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEA 570
            DGTVRN YGNQL+QFSY   +D +  CN                GG  VG+++ACAISEA
Sbjct: 769  DGTVRNLYGNQLIQFSYDIEEDSS--CN--------KGFQQYALGGESVGAISACAISEA 818

Query: 569  AYGALDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVK 390
            AY AL  P S LETSPLLNLK +LECG +K +GD+T SLFLS+KLG+  HGFEY ALEVK
Sbjct: 819  AYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAALEVK 878

Query: 389  GHLERLLFSDIISNTLISFSSETS-TRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYM 213
             +LERLLFS+I+S  +I F+   S ++   SPW+CHFH+ KEIV R++L+V SIID+LY 
Sbjct: 879  NYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQ 938

Query: 212  QWYSAKQKLKINLPHVQI-TSKGCSL--AVKQNE------MDAELCIXXXXXXXXXXXXV 60
            ++YS ++  K+   +++I +S+ CS    VK+ E       + + CI            +
Sbjct: 939  RYYSQRKDSKVCFTNLKISSSRKCSADSMVKEGEDTSIDKEEGDDCI-MVTIVENSKNPI 997

Query: 59   QCDILRDMVLPFLLRTVLR 3
            Q D +RD+V+PFLL T ++
Sbjct: 998  QLDSVRDLVIPFLLGTAIQ 1016


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Glycine max]
          Length = 1455

 Score =  843 bits (2178), Expect = 0.0
 Identities = 456/859 (53%), Positives = 594/859 (69%), Gaps = 25/859 (2%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXL-----------KY 2358
            T+ CKKLVDF+GTANELS+R LD +                                 ++
Sbjct: 246  TRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRW 305

Query: 2357 VKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXX 2178
            +K+++L KRND SFR VVVGDP+L+L EIG+P  IAE L V+E+VN  N ++        
Sbjct: 306  IKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELH 365

Query: 2177 XXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRV 1998
                          +VHL  ++ LQ GD  YRPL+DGD +LINRPPSIHQHS+++L+VRV
Sbjct: 366  LLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRV 425

Query: 1997 LPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLL 1818
            LPISSV+ INPL CSPLRGDFDGDCLHGYIPQSV +R+EL ELVAL++QL NGQSGRNLL
Sbjct: 426  LPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLL 485

Query: 1817 SLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQL--PAIISKSKADTYFWTGKQLF 1644
            SLS DSLTAA+L++EDGV LN  QMQQLQM      +L  PA++    +++  W GKQLF
Sbjct: 486  SLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLIPPAVVKAPSSNSSLWNGKQLF 545

Query: 1643 SLLLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAA 1464
            S+LLP  FDY FPS+GV++ +GE+V+SS  S WLRD+D N+F  L+++ + ++L+ L+AA
Sbjct: 546  SMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAA 605

Query: 1463 QEVLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEY 1284
            Q+VLCEWLSM G SVSLSDLY++SD   REN+I+E+  GLQ+A+       L+LD   ++
Sbjct: 606  QKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLDYYCDF 665

Query: 1283 LSANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLA 1104
            LS +   +E A++   + ++  +Q SA +SQA V AF+QVF +IQ LA +YA K N+FLA
Sbjct: 666  LSGSLQESENAITVNADRLNYERQISASLSQASVDAFRQVFRNIQSLADKYACKGNSFLA 725

Query: 1103 MLRAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDC--GAYDIPEH 930
            M +AGSKGNLLKLVQHSMCLG+QNS+  LS+R+P  L CA WN+ K  D    +    E 
Sbjct: 726  MFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCADWNSQKWVDSIQMSSGTLES 785

Query: 929  SKSYIPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAY 750
             +SYIP AVV+SSFLTGLNPLECFVHS+TNRDSSFS HAD+ GT+ R+LMFFMRDLY AY
Sbjct: 786  VQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAY 845

Query: 749  DGTVRNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEA 570
            DGTVRN YGNQL+QFSY   +D +  CN                GG  VG+++ACAISEA
Sbjct: 846  DGTVRNLYGNQLIQFSYDIEEDSS--CN--------KGFQQYALGGESVGAISACAISEA 895

Query: 569  AYGALDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVK 390
            AY AL  P S LETSPLLNLK +LECG +K +GD+T SLFLS+KLG+  HGFEY ALEVK
Sbjct: 896  AYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAALEVK 955

Query: 389  GHLERLLFSDIISNTLISFSSETS-TRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYM 213
             +LERLLFS+I+S  +I F+   S ++   SPW+CHFH+ KEIV R++L+V SIID+LY 
Sbjct: 956  NYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQ 1015

Query: 212  QWYSAKQKLKINLPHVQI-TSKGCSL--AVKQNE------MDAELCIXXXXXXXXXXXXV 60
            ++YS ++  K+   +++I +S+ CS    VK+ E       + + CI            +
Sbjct: 1016 RYYSQRKDSKVCFTNLKISSSRKCSADSMVKEGEDTSIDKEEGDDCI-MVTIVENSKNPI 1074

Query: 59   QCDILRDMVLPFLLRTVLR 3
            Q D +RD+V+PFLL T ++
Sbjct: 1075 QLDSVRDLVIPFLLGTAIQ 1093


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Glycine max]
          Length = 1458

 Score =  843 bits (2178), Expect = 0.0
 Identities = 456/859 (53%), Positives = 594/859 (69%), Gaps = 25/859 (2%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARALDRIXXXXXXXXXXXXXXXXXXXXXL-----------KY 2358
            T+ CKKLVDF+GTANELS+R LD +                                 ++
Sbjct: 246  TRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRW 305

Query: 2357 VKEILLAKRNDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXX 2178
            +K+++L KRND SFR VVVGDP+L+L EIG+P  IAE L V+E+VN  N ++        
Sbjct: 306  IKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELH 365

Query: 2177 XXXXXXXXXXXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRV 1998
                          +VHL  ++ LQ GD  YRPL+DGD +LINRPPSIHQHS+++L+VRV
Sbjct: 366  LLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRV 425

Query: 1997 LPISSVLAINPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLL 1818
            LPISSV+ INPL CSPLRGDFDGDCLHGYIPQSV +R+EL ELVAL++QL NGQSGRNLL
Sbjct: 426  LPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLL 485

Query: 1817 SLSHDSLTAAHLILEDGVTLNKVQMQQLQMFCPRQLQL--PAIISKSKADTYFWTGKQLF 1644
            SLS DSLTAA+L++EDGV LN  QMQQLQM      +L  PA++    +++  W GKQLF
Sbjct: 486  SLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLIPPAVVKAPSSNSSLWNGKQLF 545

Query: 1643 SLLLPPGFDYLFPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAA 1464
            S+LLP  FDY FPS+GV++ +GE+V+SS  S WLRD+D N+F  L+++ + ++L+ L+AA
Sbjct: 546  SMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAA 605

Query: 1463 QEVLCEWLSMRGLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEY 1284
            Q+VLCEWLSM G SVSLSDLY++SD   REN+I+E+  GLQ+A+       L+LD   ++
Sbjct: 606  QKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLDYYCDF 665

Query: 1283 LSANSDGNEEALSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLA 1104
            LS +   +E A++   + ++  +Q SA +SQA V AF+QVF +IQ LA +YA K N+FLA
Sbjct: 666  LSGSLQESENAITVNADRLNYERQISASLSQASVDAFRQVFRNIQSLADKYACKGNSFLA 725

Query: 1103 MLRAGSKGNLLKLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDC--GAYDIPEH 930
            M +AGSKGNLLKLVQHSMCLG+QNS+  LS+R+P  L CA WN+ K  D    +    E 
Sbjct: 726  MFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCADWNSQKWVDSIQMSSGTLES 785

Query: 929  SKSYIPLAVVKSSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAY 750
             +SYIP AVV+SSFLTGLNPLECFVHS+TNRDSSFS HAD+ GT+ R+LMFFMRDLY AY
Sbjct: 786  VQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAY 845

Query: 749  DGTVRNAYGNQLVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEA 570
            DGTVRN YGNQL+QFSY   +D +  CN                GG  VG+++ACAISEA
Sbjct: 846  DGTVRNLYGNQLIQFSYDIEEDSS--CN--------KGFQQYALGGESVGAISACAISEA 895

Query: 569  AYGALDLPCSALETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVK 390
            AY AL  P S LETSPLLNLK +LECG +K +GD+T SLFLS+KLG+  HGFEY ALEVK
Sbjct: 896  AYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAALEVK 955

Query: 389  GHLERLLFSDIISNTLISFSSETS-TRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYM 213
             +LERLLFS+I+S  +I F+   S ++   SPW+CHFH+ KEIV R++L+V SIID+LY 
Sbjct: 956  NYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQ 1015

Query: 212  QWYSAKQKLKINLPHVQI-TSKGCSL--AVKQNE------MDAELCIXXXXXXXXXXXXV 60
            ++YS ++  K+   +++I +S+ CS    VK+ E       + + CI            +
Sbjct: 1016 RYYSQRKDSKVCFTNLKISSSRKCSADSMVKEGEDTSIDKEEGDDCI-MVTIVENSKNPI 1074

Query: 59   QCDILRDMVLPFLLRTVLR 3
            Q D +RD+V+PFLL T ++
Sbjct: 1075 QLDSVRDLVIPFLLGTAIQ 1093


>gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  830 bits (2144), Expect = 0.0
 Identities = 444/847 (52%), Positives = 583/847 (68%), Gaps = 13/847 (1%)
 Frame = -3

Query: 2504 TKLCKKLVDFKGTANELSARAL-DRIXXXXXXXXXXXXXXXXXXXXXL-KYVKEILLAKR 2331
            T+ CKKLVDF+GTANELS+R   D+                        +++K+++L KR
Sbjct: 253  TRSCKKLVDFRGTANELSSRLNPDKTPISIFADIQKKKVAENACNSSGLRWIKDVILGKR 312

Query: 2330 NDHSFRMVVVGDPNLKLDEIGVPRQIAEKLWVAEHVNEWNIDEXXXXXXXXXXXXXXXXX 2151
            ND +FR VVVGDP+L+L EIG+P  IAE L V+E+VN  N+++                 
Sbjct: 313  NDSTFRTVVVGDPSLELSEIGIPCHIAESLQVSEYVNRQNLEKLLYCCELRLLEKGQINV 372

Query: 2150 XXXXXLVHLSLEDKLQKGDILYRPLSDGDILLINRPPSIHQHSLLALSVRVLPISSVLAI 1971
                  +HL  ++ LQ GD  YRPL DGD +LINRPPSIHQHS++AL+VRVLPISSV+ I
Sbjct: 373  CRKGSSIHLFKKEDLQIGDQFYRPLCDGDKVLINRPPSIHQHSMIALTVRVLPISSVVCI 432

Query: 1970 NPLVCSPLRGDFDGDCLHGYIPQSVDSRVELRELVALNKQLTNGQSGRNLLSLSHDSLTA 1791
            NPL CSPLRGDFDGDCLHGYIPQSV +RVEL ELVAL+KQL NGQSGRNLLSLS DSLTA
Sbjct: 433  NPLCCSPLRGDFDGDCLHGYIPQSVSARVELSELVALDKQLFNGQSGRNLLSLSEDSLTA 492

Query: 1790 AHLILEDGVTLNKVQMQQLQMFCPRQLQLPAIISKSKADTYFWTGKQLFSLLLPPGFDYL 1611
            A+L++EDGV L+  QMQQLQM C + L  PAI+    +++ FW+GKQLFS+LLP  FDY 
Sbjct: 493  AYLLMEDGVLLDVYQMQQLQMLCNKGLAPPAIVKSPSSNSSFWSGKQLFSMLLPSDFDYS 552

Query: 1610 FPSNGVLIREGEIVTSSNGSSWLRDTDGNLFHHLIKYCKEESLDLLFAAQEVLCEWLSMR 1431
            FPS+GV++ +GE+V+S   S WLRD+D N+F  L+++ + +SL+ LFAAQ VLCEWLSM 
Sbjct: 553  FPSDGVVVSDGELVSSFEASGWLRDSDCNVFQGLVEHFQGKSLNFLFAAQNVLCEWLSMT 612

Query: 1430 GLSVSLSDLYVASDRCLRENLIDEVSCGLQEAKLQSYISTLMLDCNQEYLSANSDGNEEA 1251
            G SVSLSDLY++SD   R+N+I+E+  GLQ+A+       L+LDC  ++LS N + +E +
Sbjct: 613  GFSVSLSDLYLSSDSYARKNMIEEICYGLQDAEKACNFKQLLLDCYCDFLSGNHEESENS 672

Query: 1250 LSFAIEHMSILQQASAPISQAYVSAFKQVFLDIQHLAYQYASKDNAFLAMLRAGSKGNLL 1071
            ++   + ++  +Q SA +SQA V AF+ VF +IQ LA +YA  DN FLAM +AGSK +L+
Sbjct: 673  MTVDADSLNYERQISAALSQASVDAFRHVFRNIQSLADKYACTDNTFLAMNKAGSKSSLV 732

Query: 1070 KLVQHSMCLGLQNSVTPLSFRIPHQLFCAAWNNHKVSDCGAY--DIPEHSKSYIPLAVVK 897
            +L QHSMCLG+QNS+  LS+R+P  L CAAWN+ K  D         E  +SYIP AVVK
Sbjct: 733  RLAQHSMCLGMQNSLVRLSYRLPRHLSCAAWNSQKGLDSIQIYSGTLESVQSYIPCAVVK 792

Query: 896  SSFLTGLNPLECFVHSLTNRDSSFSGHADVSGTINRKLMFFMRDLYVAYDGTVRNAYGNQ 717
            SSFLTGLNPLECFVHS+T R S FS +ADV GT+ R+LMFFMRDL+ AYDGTVRN YGNQ
Sbjct: 793  SSFLTGLNPLECFVHSVTIRASGFSENADVPGTLTRRLMFFMRDLFAAYDGTVRNLYGNQ 852

Query: 716  LVQFSYKNTQDGATPCNGNKVHSHGSSHASDIQGGHPVGSVAACAISEAAYGALDLPCSA 537
            L+QFSY    D  T C+         S      GG PVG+++A A+SEA Y ALD P S 
Sbjct: 853  LIQFSY--DIDENTSCD--------KSFKEYAIGGEPVGALSASAVSEAGYSALDQPVSL 902

Query: 536  LETSPLLNLKKILECGVKKSSGDRTASLFLSKKLGRWPHGFEYGALEVKGHLERLLFSDI 357
            LE SPLLNLK +LECG +K +GD++ SLF S+K+G+  HGFEY ALEVK +LERLLFS I
Sbjct: 903  LEASPLLNLKNVLECGSRKKNGDQSVSLFFSEKVGKQRHGFEYAALEVKNYLERLLFSKI 962

Query: 356  ISNTLISFS-SETSTRSHISPWICHFHVCKEIVKRKRLRVRSIIDALYMQWYSAKQKLKI 180
            +S  +I F+  ++S+    SPW+CHFH+ KEI+ R++L+V SIID LY ++YS   + K+
Sbjct: 963  VSTVMIIFTPPDSSSLEKYSPWVCHFHLDKEILMRRKLKVHSIIDYLYQRYYSQSTEPKV 1022

Query: 179  NLPHVQITSKGCSL--AVKQNE------MDAELCIXXXXXXXXXXXXVQCDILRDMVLPF 24
                ++I+SK CS+    K+ E       D++ CI            +Q + +RD+++PF
Sbjct: 1023 GFTKLKISSKKCSVDSTAKEGEDICIDKEDSDDCI-TVTIVENSENPIQLNSVRDLMIPF 1081

Query: 23   LLRTVLR 3
             L T ++
Sbjct: 1082 FLGTTIK 1088