BLASTX nr result
ID: Rauwolfia21_contig00006288
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00006288
(665 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus com... 105 9e-21
ref|XP_002311925.1| 40S ribosomal protein S28 [Populus trichocar... 105 9e-21
ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [C... 105 1e-20
ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citr... 105 1e-20
gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis] 105 1e-20
gb|EXC03823.1| 40S ribosomal protein S28 [Morus notabilis] 104 2e-20
gb|EXB53855.1| 40S ribosomal protein S28 [Morus notabilis] 104 2e-20
gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theob... 104 3e-20
gb|EXC37044.1| 40S ribosomal protein S28 [Morus notabilis] 103 5e-20
gb|EXB79987.1| Nicotinamide mononucleotide adenylyltransferase 1... 103 5e-20
gb|EMJ03959.1| hypothetical protein PRUPE_ppa013411mg [Prunus pe... 103 6e-20
gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus... 102 8e-20
ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [C... 102 8e-20
ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [C... 102 8e-20
emb|CAA10101.1| ribosomal protein S28 [Prunus persica] gi|394772... 102 8e-20
gb|AAM78552.1|AF522185_1 ribosomal protein small subunit 28 [Hel... 102 8e-20
gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus... 102 1e-19
ref|XP_002322747.1| hypothetical protein POPTR_0016s06300g [Popu... 102 1e-19
ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncat... 101 2e-19
emb|CBI29957.3| unnamed protein product [Vitis vinifera] 101 2e-19
>ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis]
gi|255581574|ref|XP_002531592.1| ribosomal protein S28,
putative [Ricinus communis] gi|223528788|gb|EEF30795.1|
ribosomal protein S28, putative [Ricinus communis]
gi|223539919|gb|EEF41497.1| ribosomal protein S28,
putative [Ricinus communis] gi|313586485|gb|ADR71253.1|
40S ribosomal protein S28A [Hevea brasiliensis]
gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B
[Hevea brasiliensis]
Length = 65
Score = 105 bits (263), Expect = 9e-21
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGDVLT
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLT 53
>ref|XP_002311925.1| 40S ribosomal protein S28 [Populus trichocarpa]
gi|224110082|ref|XP_002315409.1| 40S ribosomal protein
S28 [Populus trichocarpa] gi|118481584|gb|ABK92734.1|
unknown [Populus trichocarpa]
gi|118481768|gb|ABK92823.1| unknown [Populus
trichocarpa] gi|118482102|gb|ABK92982.1| unknown
[Populus trichocarpa] gi|118482699|gb|ABK93268.1|
unknown [Populus trichocarpa]
gi|222851745|gb|EEE89292.1| 40S ribosomal protein S28
[Populus trichocarpa] gi|222864449|gb|EEF01580.1| 40S
ribosomal protein S28 [Populus trichocarpa]
Length = 65
Score = 105 bits (263), Expect = 9e-21
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDSQIKHA+VVK+MGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGD+LT
Sbjct: 1 MDSQIKHAVVVKIMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDILT 53
>ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [Citrus sinensis]
Length = 65
Score = 105 bits (262), Expect = 1e-20
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGD+LT
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 53
>ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citrus clementina]
gi|557532022|gb|ESR43205.1| hypothetical protein
CICLE_v10013157mg [Citrus clementina]
Length = 114
Score = 105 bits (262), Expect = 1e-20
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGD+LT
Sbjct: 50 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 102
>gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]
Length = 65
Score = 105 bits (262), Expect = 1e-20
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
M+SQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT
Sbjct: 1 MESQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 53
>gb|EXC03823.1| 40S ribosomal protein S28 [Morus notabilis]
Length = 155
Score = 104 bits (260), Expect = 2e-20
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = -2
Query: 643 SEHKQLLCLSSNFQLKVSFG-TLSHSAPSIECRSLNLMDSQIKHAIVVKVMGRTGSRGQV 467
++H Q L Q G ++ S S M+SQ+KHA+VVKVMGRTGSRGQV
Sbjct: 54 ADHNQTLVQPRTIQTYSQTGFVIATSELSESAAKSTRMESQVKHAVVVKVMGRTGSRGQV 113
Query: 466 TQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
TQVRVKF+DDQNRFIMRNVKGPVREGD+LT
Sbjct: 114 TQVRVKFLDDQNRFIMRNVKGPVREGDILT 143
>gb|EXB53855.1| 40S ribosomal protein S28 [Morus notabilis]
Length = 86
Score = 104 bits (260), Expect = 2e-20
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = -2
Query: 553 CRSLNLMDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
C M+SQ+KHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGD+LT
Sbjct: 16 CIQYKRMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 74
>gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theobroma cacao]
Length = 65
Score = 104 bits (259), Expect = 3e-20
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKF+DDQNR+IMRNVKGPVREGD+LT
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILT 53
>gb|EXC37044.1| 40S ribosomal protein S28 [Morus notabilis]
Length = 65
Score = 103 bits (257), Expect = 5e-20
Identities = 48/53 (90%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
M+SQ+KHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGD+LT
Sbjct: 1 MESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 53
>gb|EXB79987.1| Nicotinamide mononucleotide adenylyltransferase 1 [Morus notabilis]
Length = 275
Score = 103 bits (257), Expect = 5e-20
Identities = 48/53 (90%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
M+SQ+KHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGD+LT
Sbjct: 211 MESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 263
>gb|EMJ03959.1| hypothetical protein PRUPE_ppa013411mg [Prunus persica]
Length = 124
Score = 103 bits (256), Expect = 6e-20
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDS IKHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGD+LT
Sbjct: 60 MDSTIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 112
>gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus vulgaris]
Length = 65
Score = 102 bits (255), Expect = 8e-20
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDSQ+KHAIVVKVMGRTGSRGQVTQVRVKF+DDQNR IMRNVKGPVREGD+LT
Sbjct: 1 MDSQVKHAIVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 53
>ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
Length = 68
Score = 102 bits (255), Expect = 8e-20
Identities = 48/53 (90%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKF+DDQNR+IMRNVKGPVREGD+LT
Sbjct: 4 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILT 56
>ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449440917|ref|XP_004138230.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449440919|ref|XP_004138231.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449440921|ref|XP_004138232.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449463340|ref|XP_004149392.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449463342|ref|XP_004149393.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477091|ref|XP_004154926.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477094|ref|XP_004154927.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477096|ref|XP_004154928.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477100|ref|XP_004154929.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503792|ref|XP_004162179.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503794|ref|XP_004162180.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503796|ref|XP_004162181.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
Length = 65
Score = 102 bits (255), Expect = 8e-20
Identities = 48/53 (90%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKF+DDQNR+IMRNVKGPVREGD+LT
Sbjct: 1 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILT 53
>emb|CAA10101.1| ribosomal protein S28 [Prunus persica] gi|3947721|emb|CAA10102.1|
ribosomal protein S28 [Prunus persica]
gi|3947723|emb|CAA10103.1| ribosomal protein S28 [Prunus
persica] gi|462398368|gb|EMJ04036.1| hypothetical
protein PRUPE_ppa014541mg [Prunus persica]
Length = 65
Score = 102 bits (255), Expect = 8e-20
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDS +KHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGD+LT
Sbjct: 1 MDSTVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 53
>gb|AAM78552.1|AF522185_1 ribosomal protein small subunit 28 [Helianthus annuus]
Length = 65
Score = 102 bits (255), Expect = 8e-20
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
M+SQIKHA+VVKVMGR+GSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGDVLT
Sbjct: 1 MESQIKHAVVVKVMGRSGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLT 53
>gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus vulgaris]
Length = 65
Score = 102 bits (253), Expect = 1e-19
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDSQ+KHA+VVKVMGRTGSRGQVTQVRVKF+DDQNR IMRNVKGPVREGD+LT
Sbjct: 1 MDSQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 53
>ref|XP_002322747.1| hypothetical protein POPTR_0016s06300g [Populus trichocarpa]
gi|118481467|gb|ABK92676.1| unknown [Populus
trichocarpa] gi|118485130|gb|ABK94428.1| unknown
[Populus trichocarpa] gi|222867377|gb|EEF04508.1|
hypothetical protein POPTR_0016s06300g [Populus
trichocarpa]
Length = 65
Score = 102 bits (253), Expect = 1e-19
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
MDSQIKHA+V+K+MGRTGSRGQVTQVRVKF+DD NRFIMRNVKGPVREGDVLT
Sbjct: 1 MDSQIKHAVVMKIMGRTGSRGQVTQVRVKFLDDPNRFIMRNVKGPVREGDVLT 53
>ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncatula]
gi|355493593|gb|AES74796.1| 30S ribosomal protein S28e
[Medicago truncatula]
Length = 75
Score = 101 bits (251), Expect = 2e-19
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = -2
Query: 535 MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 377
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKF+DDQNR IMRNVKGPVREGD+LT
Sbjct: 11 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 63
>emb|CBI29957.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 101 bits (251), Expect = 2e-19
Identities = 52/70 (74%), Positives = 58/70 (82%), Gaps = 5/70 (7%)
Frame = -2
Query: 571 SAPSIECRSLNL-----MDSQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVK 407
SAPS+ L M+S +KHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVK
Sbjct: 30 SAPSLSSSRRLLSSQCKMESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVK 89
Query: 406 GPVREGDVLT 377
GPVREGD+LT
Sbjct: 90 GPVREGDILT 99