BLASTX nr result
ID: Rauwolfia21_contig00006279
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00006279
(244 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 136 3e-30
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669... 125 4e-27
gb|ADN34143.1| copia-type polyprotein [Cucumis melo subsp. melo] 122 4e-26
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 121 1e-25
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 121 1e-25
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 121 1e-25
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 121 1e-25
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 120 2e-25
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 120 2e-25
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 118 9e-25
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 115 5e-24
ref|XP_006582703.1| PREDICTED: uncharacterized protein LOC102669... 114 1e-23
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665... 113 2e-23
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 110 2e-22
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera] 105 8e-21
gb|ABR16307.1| unknown [Picea sitchensis] 104 1e-20
ref|XP_006590086.1| PREDICTED: uncharacterized protein LOC102667... 103 2e-20
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 103 2e-20
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 103 3e-20
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 103 3e-20
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 136 bits (343), Expect = 3e-30
Identities = 64/81 (79%), Positives = 68/81 (83%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTILNM RCMLKAKNMP EFWAEA++CAVYLSNRSPT NVK QTPQEAW G +P V HL
Sbjct: 326 NRTILNMTRCMLKAKNMPKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHL 385
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FGSIAY VP Q R KLDD
Sbjct: 386 RVFGSIAYAHVPDQGRFKLDD 406
>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
Length = 711
Score = 125 bits (315), Expect = 4e-27
Identities = 55/81 (67%), Positives = 68/81 (83%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTILNM R MLK+K MP EFWAEA++CAVYL+NRSPT +V +TPQEAW GR+P + HL
Sbjct: 508 NRTILNMVRSMLKSKKMPKEFWAEAVACAVYLTNRSPTRSVHEKTPQEAWSGRKPGISHL 567
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
++FGSIAY VP ++R+KLDD
Sbjct: 568 KVFGSIAYTHVPDEKRTKLDD 588
>gb|ADN34143.1| copia-type polyprotein [Cucumis melo subsp. melo]
Length = 238
Score = 122 bits (307), Expect = 4e-26
Identities = 54/81 (66%), Positives = 68/81 (83%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTILNMAR MLK+K MP EFWA+A+ CA+YLSNRSPT ++ +TPQ+AW GR+PS+ HL
Sbjct: 59 NRTILNMARSMLKSKKMPKEFWAQAVKCAMYLSNRSPTRSLWNKTPQKAWTGRKPSIAHL 118
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FG +AY +P Q+RSKLDD
Sbjct: 119 RVFGCMAYAHIPYQKRSKLDD 139
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 121 bits (303), Expect = 1e-25
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTIL MAR MLK+K +P E WAEA++CAVYL NRSPT +V +TPQEAW GR+P V HL
Sbjct: 574 NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 633
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FGSIA+ VP ++RSKLDD
Sbjct: 634 RVFGSIAHAHVPDEKRSKLDD 654
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 121 bits (303), Expect = 1e-25
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTIL MAR MLK+K +P E WAEA++CAVYL NRSPT +V +TPQEAW GR+P V HL
Sbjct: 635 NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 694
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FGSIA+ VP ++RSKLDD
Sbjct: 695 RVFGSIAHAHVPDEKRSKLDD 715
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 121 bits (303), Expect = 1e-25
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTIL MAR MLK+K +P E WAEA++CAVYL NRSPT +V +TPQEAW GR+P V HL
Sbjct: 635 NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 694
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FGSIA+ VP ++RSKLDD
Sbjct: 695 RVFGSIAHAHVPDEKRSKLDD 715
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 121 bits (303), Expect = 1e-25
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTIL MAR MLK+K +P E WAEA++CAVYL NRSPT +V +TPQEAW GR+P V HL
Sbjct: 635 NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 694
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FGSIA+ VP ++RSKLDD
Sbjct: 695 RVFGSIAHAHVPDEKRSKLDD 715
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 120 bits (300), Expect = 2e-25
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTIL MAR MLK+K +P E WAEA++CAVYL NRSPT +V +TPQEAW GR+P V HL
Sbjct: 132 NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 191
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FGSIA+ VP ++R+KLDD
Sbjct: 192 RVFGSIAHAHVPDEKRNKLDD 212
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1272
Score = 120 bits (300), Expect = 2e-25
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTIL MAR MLK+K +P E WAEA++CAVYL NRSPT +V +TPQEAW GR+P V HL
Sbjct: 635 NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 694
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FGSIA+ VP ++R+KLDD
Sbjct: 695 RVFGSIAHAHVPDEKRNKLDD 715
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 118 bits (295), Expect = 9e-25
Identities = 54/81 (66%), Positives = 65/81 (80%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTIL MAR MLK+K +P E WAEA++CAVYL NRSPT +V +TPQEAW GR+ V HL
Sbjct: 635 NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHL 694
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FGSIA+ VP ++RSKLDD
Sbjct: 695 RVFGSIAHAHVPDEKRSKLDD 715
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 115 bits (289), Expect = 5e-24
Identities = 49/81 (60%), Positives = 65/81 (80%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTIL+M R MLK+K MP EFWAEA+ CA+Y+ NR P + + QTPQEAW G++P+V HL
Sbjct: 656 NRTILDMVRSMLKSKKMPKEFWAEAVQCAIYVQNRCPHVKLDDQTPQEAWSGQKPTVSHL 715
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
++FGS+AY VP Q+R+KL+D
Sbjct: 716 KVFGSVAYAHVPDQRRTKLED 736
>ref|XP_006582703.1| PREDICTED: uncharacterized protein LOC102669793 [Glycine max]
Length = 480
Score = 114 bits (285), Expect = 1e-23
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = +1
Query: 37 KAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHLRIFGSIAYVQVP 216
KAKNMP EFWAEA++CAVYLSNRSPT NVK QTPQEAW G +P V HLR+FGSIAY VP
Sbjct: 382 KAKNMPKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSIAYAHVP 441
Query: 217 QQQRSKLDD 243
Q R KLDD
Sbjct: 442 DQGRFKLDD 450
>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
Length = 678
Score = 113 bits (283), Expect = 2e-23
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTILNM R MLK+K M EFWA+A++CAVYL+N S T +V +TPQEAW GR+P + HL
Sbjct: 552 NRTILNMVRSMLKSKKMLKEFWAKAVACAVYLTNCSLTRSVHEKTPQEAWSGRKPGISHL 611
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
++FGSIAY VP ++R+KLDD
Sbjct: 612 KVFGSIAYTHVPDEKRTKLDD 632
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 110 bits (275), Expect = 2e-22
Identities = 49/81 (60%), Positives = 61/81 (75%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRTI+ MAR MLKAKN+PNEFW +A++C VY+ NR+PT +V TP EAW +PSV HL
Sbjct: 595 NRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHL 654
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
++F SIAY +P Q R KLDD
Sbjct: 655 KVFRSIAYSHIPNQLRGKLDD 675
>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
Length = 894
Score = 105 bits (261), Expect = 8e-21
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRT++ MARC+L K MP+ FWAEA++ +VYL NR PT ++K +TP E W+G +P V+HL
Sbjct: 198 NRTVMEMARCLLFEKKMPSNFWAEAVNTSVYLLNRLPTKSLKNKTPYEEWYGVKPFVNHL 257
Query: 181 RIFGSIAYVQVPQQQRSKLD 240
+IFGSI Y VP+ +RSKLD
Sbjct: 258 KIFGSICYYHVPEPKRSKLD 277
>gb|ABR16307.1| unknown [Picea sitchensis]
Length = 407
Score = 104 bits (260), Expect = 1e-20
Identities = 44/80 (55%), Positives = 62/80 (77%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRT++ MARCML A+NM +FWAEAI+ A Y+ NR+PT+ VK++TP+EAW R+P+V H
Sbjct: 242 NRTLMEMARCMLHARNMDPKFWAEAINTATYIVNRTPTIAVKHKTPEEAWSRRKPTVSHF 301
Query: 181 RIFGSIAYVQVPQQQRSKLD 240
++FG YV +P ++R KLD
Sbjct: 302 KVFGCDVYVHIPDEKRKKLD 321
>ref|XP_006590086.1| PREDICTED: uncharacterized protein LOC102667006 [Glycine max]
Length = 321
Score = 103 bits (258), Expect = 2e-20
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +1
Query: 37 KAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHLRIFGSIAYVQVP 216
KAKNMP EFWAEA++CA+YLSNRSPT NVK QTPQEAW G +P V HLR+FGSI Y VP
Sbjct: 259 KAKNMPKEFWAEAVACAIYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSITYAHVP 318
Query: 217 QQ 222
Q
Sbjct: 319 DQ 320
>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101216349 [Cucumis sativus]
Length = 1830
Score = 103 bits (257), Expect = 2e-20
Identities = 45/81 (55%), Positives = 62/81 (76%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NR I+ +AR MLKAK +P++FW +A++CAVYL NR+ T +V+ TPQEAW G +P+V HL
Sbjct: 604 NRIIMELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAWSGLKPTVSHL 663
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
R+FG IAY + ++R KLDD
Sbjct: 664 RVFGCIAYSHISDEKRGKLDD 684
>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 103 bits (256), Expect = 3e-20
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRT++ MAR M+KAKN+ N FWAE ++ AVYL N SPT V +TP EAW+GR+P V HL
Sbjct: 569 NRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHL 628
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
++FGS+AY + RSKLD+
Sbjct: 629 KVFGSVAYTLIDSHNRSKLDE 649
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 103 bits (256), Expect = 3e-20
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +1
Query: 1 NRTILNMARCMLKAKNMPNEFWAEAISCAVYLSNRSPTMNVKYQTPQEAWHGRRPSVHHL 180
NRT++ MAR M+KAKN+ N FWAE ++ AVYL N SPT V +TP EAW+GR+P V HL
Sbjct: 591 NRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHL 650
Query: 181 RIFGSIAYVQVPQQQRSKLDD 243
++FGS+AY + RSKLD+
Sbjct: 651 KVFGSVAYTLIDSHNRSKLDE 671