BLASTX nr result
ID: Rauwolfia21_contig00006126
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00006126
(264 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 110 2e-22
ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 109 4e-22
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 107 1e-21
ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citr... 107 1e-21
gb|EOY01099.1| Zinc finger, C3HC4 type (RING finger) family prot... 105 5e-21
ref|XP_006583718.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 103 2e-20
ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 103 2e-20
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 101 9e-20
emb|CBI26830.3| unnamed protein product [Vitis vinifera] 101 9e-20
gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus pe... 100 3e-19
emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera] 100 3e-19
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 99 8e-19
gb|ESW25240.1| hypothetical protein PHAVU_003G019100g [Phaseolus... 99 8e-19
gb|ESW25239.1| hypothetical protein PHAVU_003G019100g [Phaseolus... 99 8e-19
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 99 8e-19
gb|EXC54203.1| E3 ubiquitin protein ligase RIE1 [Morus notabilis] 97 3e-18
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 96 7e-18
ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 96 7e-18
ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Popu... 95 9e-18
ref|XP_002312464.2| zinc finger family protein [Populus trichoca... 95 1e-17
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 110 bits (275), Expect = 2e-22
Identities = 58/87 (66%), Positives = 64/87 (73%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL+ILPKYRFQ++ +EEK
Sbjct: 824 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQLTVEEEKPS 883
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG+MVPIETSSGYLANER+LLPEDA
Sbjct: 884 VGAGKMVPIETSSGYLANERILLPEDA 910
>ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cicer arietinum]
Length = 349
Score = 109 bits (272), Expect = 4e-22
Identities = 58/87 (66%), Positives = 62/87 (71%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL+ILPKYRFQI +EEK
Sbjct: 210 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQIVSNEEKAS 269
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG MVPIET+SGYLANER+LLPEDA
Sbjct: 270 GGAGSMVPIETTSGYLANERMLLPEDA 296
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 107 bits (268), Expect = 1e-21
Identities = 54/87 (62%), Positives = 63/87 (72%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL+ILPKYRF++ ++EK G
Sbjct: 880 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLG 939
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG+MVPIET+ GY+ANER+LLPEDA
Sbjct: 940 VGAGKMVPIETNGGYVANERILLPEDA 966
>ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citrus clementina]
gi|557550773|gb|ESR61402.1| hypothetical protein
CICLE_v10015731mg [Citrus clementina]
Length = 359
Score = 107 bits (268), Expect = 1e-21
Identities = 54/87 (62%), Positives = 63/87 (72%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL+ILPKYRF++ ++EK G
Sbjct: 220 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFEVQNNDEKLG 279
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG+MVPIET+ GY+ANER+LLPEDA
Sbjct: 280 VGAGKMVPIETNGGYVANERILLPEDA 306
>gb|EOY01099.1| Zinc finger, C3HC4 type (RING finger) family protein isoform 1
[Theobroma cacao]
Length = 360
Score = 105 bits (263), Expect = 5e-21
Identities = 56/87 (64%), Positives = 61/87 (70%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL+ILPKYRFQI + K
Sbjct: 222 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQIINNGGKAS 281
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG+MVP+ETSSGYLANER+LLPEDA
Sbjct: 282 VGAGKMVPVETSSGYLANERILLPEDA 308
>ref|XP_006583718.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X3
[Glycine max]
Length = 309
Score = 103 bits (258), Expect = 2e-20
Identities = 56/87 (64%), Positives = 60/87 (68%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL++LPKYRF+I DE+K
Sbjct: 217 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPS 276
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG MVPIETSS YLANER LLPEDA
Sbjct: 277 GGAGSMVPIETSSAYLANERTLLPEDA 303
>ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X1
[Glycine max] gi|571466652|ref|XP_006583717.1|
PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform
X2 [Glycine max]
Length = 356
Score = 103 bits (258), Expect = 2e-20
Identities = 56/87 (64%), Positives = 60/87 (68%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL++LPKYRF+I DE+K
Sbjct: 217 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPS 276
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG MVPIETSS YLANER LLPEDA
Sbjct: 277 GGAGSMVPIETSSAYLANERTLLPEDA 303
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 101 bits (252), Expect = 9e-20
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL++LP+YRF+ + +EEK G
Sbjct: 2161 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFE-ANNEEKSG 2219
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG M+P ETSSGYLANER+LLPEDA
Sbjct: 2220 VGAGTMIPTETSSGYLANERILLPEDA 2246
>emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 101 bits (252), Expect = 9e-20
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL++LP+YRF+ + +EEK G
Sbjct: 131 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFE-ANNEEKSG 189
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG M+P ETSSGYLANER+LLPEDA
Sbjct: 190 VGAGTMIPTETSSGYLANERILLPEDA 216
>gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus persica]
Length = 374
Score = 100 bits (248), Expect = 3e-19
Identities = 54/87 (62%), Positives = 61/87 (70%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGAS+ADL+ILPKYRF+ S EEK
Sbjct: 236 FFAIFCVVLACLIGVALCCCLPCIIAILYAVAGQEGASDADLSILPKYRFR-SSSEEKSS 294
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG+M+P+ETSSGYLA ER+LLPEDA
Sbjct: 295 VGAGKMIPVETSSGYLAIERILLPEDA 321
>emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 100 bits (248), Expect = 3e-19
Identities = 54/87 (62%), Positives = 61/87 (70%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL++LP+YRF+ + +EEK G
Sbjct: 217 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFE-ANNEEKSG 275
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG M P ETSSGYLANER+LLPEDA
Sbjct: 276 VGAGTMFPTETSSGYLANERILLPEDA 302
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 98.6 bits (244), Expect = 8e-19
Identities = 55/87 (63%), Positives = 58/87 (66%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCV LYAV GQEGASE DL +LPKYRF I K+EEK
Sbjct: 810 FFAIFCVALACLIGVALCCCLPCIIAVLYAV-GQEGASEEDLRVLPKYRFHICKNEEKPR 868
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAGRMVPIETSSGYLA ER+LLPEDA
Sbjct: 869 VGAGRMVPIETSSGYLATERILLPEDA 895
>gb|ESW25240.1| hypothetical protein PHAVU_003G019100g [Phaseolus vulgaris]
Length = 342
Score = 98.6 bits (244), Expect = 8e-19
Identities = 53/87 (60%), Positives = 58/87 (66%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL+IL KYRF+I +E+K
Sbjct: 203 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILQKYRFRIPSNEDKSS 262
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
G G MVPIETSS YLA ER+LLPEDA
Sbjct: 263 GGGGSMVPIETSSAYLATERILLPEDA 289
>gb|ESW25239.1| hypothetical protein PHAVU_003G019100g [Phaseolus vulgaris]
Length = 271
Score = 98.6 bits (244), Expect = 8e-19
Identities = 53/87 (60%), Positives = 58/87 (66%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL+IL KYRF+I +E+K
Sbjct: 132 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILQKYRFRIPSNEDKSS 191
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
G G MVPIETSS YLA ER+LLPEDA
Sbjct: 192 GGGGSMVPIETSSAYLATERILLPEDA 218
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 98.6 bits (244), Expect = 8e-19
Identities = 55/87 (63%), Positives = 58/87 (66%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCV LYAV GQEGASE DL +LPKYRF I K+EEK
Sbjct: 905 FFAIFCVALACLIGVALCCCLPCIIAVLYAV-GQEGASEEDLRVLPKYRFHICKNEEKPR 963
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAGRMVPIETSSGYLA ER+LLPEDA
Sbjct: 964 VGAGRMVPIETSSGYLATERILLPEDA 990
>gb|EXC54203.1| E3 ubiquitin protein ligase RIE1 [Morus notabilis]
Length = 428
Score = 96.7 bits (239), Expect = 3e-18
Identities = 51/86 (59%), Positives = 57/86 (66%)
Frame = -3
Query: 259 FAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCGA 80
FA+FCVV LYAVAGQEGASEADL LP+YRF+IS D+EK
Sbjct: 272 FAVFCVVLACLIGVALCCCLPCIIAILYAVAGQEGASEADLRFLPQYRFRISSDDEKPSL 331
Query: 79 GAGRMVPIETSSGYLANERLLLPEDA 2
G G MVP+ETSS YLA ER+LLPEDA
Sbjct: 332 GEGTMVPVETSSRYLATERILLPEDA 357
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 95.5 bits (236), Expect = 7e-18
Identities = 53/87 (60%), Positives = 60/87 (68%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL+ILPKYRF+IS EEK
Sbjct: 871 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFRIS-GEEKSS 929
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG+M+P+ET+S Y A ER+LLPEDA
Sbjct: 930 VGAGKMIPMETTSAYPAVERILLPEDA 956
>ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 95.5 bits (236), Expect = 7e-18
Identities = 50/87 (57%), Positives = 57/87 (65%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASE+DL+ILPKYRFQ+ +EE G
Sbjct: 205 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQLLSNEETPG 264
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
G G M+P+ETS+GY NER L PEDA
Sbjct: 265 EGGGSMIPMETSNGYSVNERTLSPEDA 291
>ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Populus trichocarpa]
gi|550329589|gb|EEF00953.2| hypothetical protein
POPTR_0010s11660g [Populus trichocarpa]
Length = 327
Score = 95.1 bits (235), Expect = 9e-18
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL+ILPKY++ + +EEK
Sbjct: 187 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYKYLVMGNEEKRP 246
Query: 82 -AGAGRMVPIETSSGYLANERLLLPEDA 2
GAG+MVP+ETSSGYL+ ER+LLPEDA
Sbjct: 247 RVGAGKMVPVETSSGYLSTERVLLPEDA 274
>ref|XP_002312464.2| zinc finger family protein [Populus trichocarpa]
gi|550332992|gb|EEE89831.2| zinc finger family protein
[Populus trichocarpa]
Length = 351
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/87 (58%), Positives = 59/87 (67%)
Frame = -3
Query: 262 FFAIFCVVXXXXXXXXXXXXXXXXXXXLYAVAGQEGASEADLNILPKYRFQISKDEEKCG 83
FFAIFCVV LYAVAGQEGASEADL LPKY+FQ+ ++EEK G
Sbjct: 212 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLIQLPKYKFQMIRNEEKPG 271
Query: 82 AGAGRMVPIETSSGYLANERLLLPEDA 2
AG+MVP+ETSS +L ER+LLPEDA
Sbjct: 272 IEAGKMVPVETSSRFLGTERILLPEDA 298