BLASTX nr result

ID: Rauwolfia21_contig00006018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00006018
         (670 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533538.1| Multidrug resistance protein, putative [Rici...    84   3e-14
gb|EPS68961.1| hypothetical protein M569_05805, partial [Genlise...    80   6e-13
ref|XP_002324121.2| hypothetical protein POPTR_0017s13110g [Popu...    79   1e-12
gb|EOY03715.1| Transporter associated with antigen processing pr...    79   1e-12
emb|CBI21202.3| unnamed protein product [Vitis vinifera]               57   5e-06

>ref|XP_002533538.1| Multidrug resistance protein, putative [Ricinus communis]
           gi|223526588|gb|EEF28841.1| Multidrug resistance
           protein, putative [Ricinus communis]
          Length = 644

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 43/65 (66%), Positives = 52/65 (80%)
 Frame = -2

Query: 195 MGRKQHLDWTSRSIMSTGSERVSLLNKKAKQKADEDASSNAPLTDLEHGDAVPAANVQFS 16
           MG+KQ+LDWTSRSI S+GSERVSLL+K+A++KA+ED S +    DLE GD V AANV F 
Sbjct: 1   MGKKQNLDWTSRSISSSGSERVSLLSKEARRKANEDQSPDGSPNDLELGDGVEAANVGFG 60

Query: 15  RVFLL 1
           RVF L
Sbjct: 61  RVFSL 65


>gb|EPS68961.1| hypothetical protein M569_05805, partial [Genlisea aurea]
          Length = 649

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 42/65 (64%), Positives = 50/65 (76%)
 Frame = -2

Query: 195 MGRKQHLDWTSRSIMSTGSERVSLLNKKAKQKADEDASSNAPLTDLEHGDAVPAANVQFS 16
           MG+KQHLDWTS+SIMS+GSERVSLLNK  ++K ++DA  +   TDLE G AV  ANV FS
Sbjct: 1   MGKKQHLDWTSKSIMSSGSERVSLLNK--QRKVNDDAEGDESKTDLEQGGAVEPANVGFS 58

Query: 15  RVFLL 1
           RV  L
Sbjct: 59  RVIRL 63


>ref|XP_002324121.2| hypothetical protein POPTR_0017s13110g [Populus trichocarpa]
           gi|550320188|gb|EEF04254.2| hypothetical protein
           POPTR_0017s13110g [Populus trichocarpa]
          Length = 645

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
 Frame = -2

Query: 195 MGRKQHLDWTSRSIMSTGSERVSLL-NKKAKQKADEDASSNAPLTDLEHGDAVPAANVQF 19
           MG+K++LDWTSRSI S+GSERVSLL +K AK+K++E  S + P TDLE G    AANV F
Sbjct: 1   MGKKEYLDWTSRSISSSGSERVSLLTSKDAKRKSNEGESPDGPATDLELGGGTEAANVGF 60

Query: 18  SRVFLL 1
           SRVF L
Sbjct: 61  SRVFAL 66


>gb|EOY03715.1| Transporter associated with antigen processing protein 2 [Theobroma
           cacao]
          Length = 644

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = -2

Query: 195 MGRKQHLDWTSRSIMSTGSERVSLLNKKAKQKADEDASSNAPLTDLEHGDAVPAANVQFS 16
           MG+KQHLDWTS+SI S+GS RV LL K+  ++A++  S N P++DLE GDA   ANV F 
Sbjct: 1   MGKKQHLDWTSKSISSSGSNRVPLLYKEKSKQANDHQSPNGPVSDLEQGDAAEVANVGFC 60

Query: 15  RVFLL 1
           RVF L
Sbjct: 61  RVFSL 65


>emb|CBI21202.3| unnamed protein product [Vitis vinifera]
          Length = 1265

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = -2

Query: 168 TSRSIMSTGSE-RVSLLNKKAKQKADEDASSNAPLTDLEHGDAVPAANVQFSRVFLL 1
           TS+  M++GSE    LLNK+A++K ++D ++N PLTDLE GDA  AA V F RVF L
Sbjct: 630 TSKPNMASGSESNAPLLNKEAEKKPNDDQAANDPLTDLERGDADQAAKVGFFRVFFL 686


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