BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00005881
         (2806 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   739   0.0  
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   737   0.0  
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao...   734   0.0  
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   733   0.0  
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   724   0.0  
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus...   719   0.0  
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   719   0.0  
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...   714   0.0  
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe...   713   0.0  
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   711   0.0  
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein...   697   0.0  
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   697   0.0  
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   695   0.0  
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   694   0.0  
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   692   0.0  
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...   668   0.0  
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein...   638   e-180
gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]       625   e-176
ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutr...   621   e-175
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th...   620   e-174

>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
            [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform 2 [Solanum lycopersicum]
          Length = 645

 Score =  739 bits (1909), Expect = 0.0
 Identities = 407/648 (62%), Positives = 468/648 (72%), Gaps = 10/648 (1%)
 Frame = +3

Query: 135  DLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGS 314
            +L  LLLEAAGRT+   +N                                      +GS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPHSSKRHHKSSYSDDGSDSRDDDSDDGRGYSGRKL-SGS 62

Query: 315  QVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXXLYKDEDDRKKLAQMTELE 494
            QVPLKKRLDP ERDDDHSS+ EG                   LYKD+DDR+KLAQMTELE
Sbjct: 63   QVPLKKRLDPQERDDDHSSHGEGNDGDGYGNESDDDSIGSD-LYKDDDDRQKLAQMTELE 121

Query: 495  REMILEDRATKRSDKGLHEKF-----KNRKGSPAQTNSRGVXXXXXXXXXXXXXXXXLNE 659
            REMIL DRA K+SD+ LH+K      + RK S   ++SRG+                LNE
Sbjct: 122  REMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNE 181

Query: 660  IRAKRLRQQ-DPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGS-PT--QSASHSDED 827
            IRAKR RQQ DPE   KLRDA         YSP+KRR FTAA++GS PT  +S SHS+E 
Sbjct: 182  IRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHSNEG 241

Query: 828  DSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLIVGCFVRVGI 1007
            DS+ D G+ DSD++K+S ES+ PT+++I+EI+IRRSKLAKWFMEPFF++LIVGCFVRVGI
Sbjct: 242  DSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 301

Query: 1008 GKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSPP 1187
            G+SRSGPIYRLC+VRNVDASDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAMISDSPP
Sbjct: 302  GRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISDSPP 361

Query: 1188 TREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQEKKSATWRPL 1367
             R+EFDQWVREVERSGGRMPSKQ+VLEKK+AIQK+NTFVYSA+TVKQMLQ+KKSATWRPL
Sbjct: 362  LRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPL 421

Query: 1368 NVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEMNRKNRV 1547
            NVAAEKDRLR +MEVAKMKNDEAEVERIKARLQELE SR+ QE D KA RLAEMNRKNRV
Sbjct: 422  NVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEMNRKNRV 481

Query: 1548 ENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGAASANGDSSTASAVAS-I 1724
            ENFKNAS+L+PVN  LKAGEAGYDPFSRRWTRS NY+       ++NG+++ A+A+A+  
Sbjct: 482  ENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYF----AKGASNGEAAAAAALAAED 537

Query: 1725 NXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELPISLAVLQKXX 1904
            N                         KLVDT+APVDQGTESN LH+F+LPISLAVLQK  
Sbjct: 538  NNGAGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFG 597

Query: 1905 XXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
                       RKQRIEATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 598  GSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  737 bits (1902), Expect = 0.0
 Identities = 404/651 (62%), Positives = 469/651 (72%), Gaps = 13/651 (1%)
 Frame = +3

Query: 135  DLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGS 314
            +L  LLLEAAGRT+   +N                                      +GS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPQSSRRHHKSSYSDDGSDSRDDDSDDGRGYSGRKL-SGS 62

Query: 315  QVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXXLYKDEDDRKKLAQMTELE 494
            QVPLKKRLDP ERDDDHSS+ EG                   LYKD+DDR+KLAQMTELE
Sbjct: 63   QVPLKKRLDPQERDDDHSSHGEGNDGDGYGNESDDDSIGSD-LYKDDDDRQKLAQMTELE 121

Query: 495  REMILEDRATKRSDKGLHEKF-----KNRKGSPAQTNSRGVXXXXXXXXXXXXXXXXLNE 659
            REMIL DRA K+SD+ LH+K      + RK S   ++SRG+                LNE
Sbjct: 122  REMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNE 181

Query: 660  IRAKRLRQQ-DPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGS-PT--QSASHSDED 827
            IRAKR RQQ DPE   KLRDA         YSP+KRR FTAAT+GS PT  +S SHS+E 
Sbjct: 182  IRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESDSHSNEG 241

Query: 828  DSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLIVGCFVRVGI 1007
            DS+ D G+ DSD++K+S ES+ PT+++I+EI+IRRSKLAKWFMEPFF++LIVGCFVRVGI
Sbjct: 242  DSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 301

Query: 1008 GKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSPP 1187
            G+SRSGPIYRLC+VRNVD+SDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAM+SDSPP
Sbjct: 302  GRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSDSPP 361

Query: 1188 TREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQEKKSATWRPL 1367
             R+EFDQWVREVERSGGRMPSKQ+VLEKK+AIQK+NTFVYSA+TVKQMLQ+KKSATWRPL
Sbjct: 362  LRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPL 421

Query: 1368 NVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEMNRKNRV 1547
            NVAAEKDRLR +MEVAKMKNDEAEVERIKARLQEL+ SR+ QE D KA RLAEMNRKNRV
Sbjct: 422  NVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRLAEMNRKNRV 481

Query: 1548 ENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYY---MSKHGAASANGDSSTASAVA 1718
            ENFKNAS+L+PVN  LKAG+AGYDPFSRRWTRS NY+    ++    ++NG+ + A+A+A
Sbjct: 482  ENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYFAKGANEEAEGASNGEVAAAAALA 541

Query: 1719 S-INXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELPISLAVLQ 1895
            +  N                         KLVDT+APVDQGTESN LH+F+LPISLAVLQ
Sbjct: 542  AEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQ 601

Query: 1896 KXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
            K             RKQRIEATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 602  KFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652


>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  734 bits (1896), Expect = 0.0
 Identities = 399/661 (60%), Positives = 459/661 (69%), Gaps = 21/661 (3%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLE LLLEAAGRT    +N H                                   P+
Sbjct: 1    MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX---LYKDEDDRKKLAQ 479
            GSQVPLKKRLDP ERDDD  S EEG                      LYK+EDDR+KLAQ
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 480  MTELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQTNSRGVXXXXXXXXX 629
            MTELERE+IL +RA KR DK   EK ++          RK +P   +SRGV         
Sbjct: 121  MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 630  XXXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQS- 806
                   LNE+RAKRL+QQDPEAHRKLRDA          SPVKR+PFTA+++ S +QS 
Sbjct: 181  AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240

Query: 807  ---ASHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDL 977
                S+S+++ STGDGG+ DSD+++       PT+D+I+EITIRRSKLAKWFMEPFFE+L
Sbjct: 241  SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300

Query: 978  IVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1157
            IVGC+VRVGIG+S+SGPIYRLC+VRNVDA++P+R YKL+NKTTYKYLNVVWGNESSAARW
Sbjct: 301  IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360

Query: 1158 QMAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQ 1337
            QMAMISDSPP  EEF Q +RE+ERSGGRMPSKQ+VLEKK+A+QK  TFVYSA TVKQMLQ
Sbjct: 361  QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420

Query: 1338 EKKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIR 1517
            EKKS + RPLN+AAEKDRLR ++E+A+ K+DEAEVERIK RLQ+LEASRQAQE D KA+R
Sbjct: 421  EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480

Query: 1518 LAEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSK----HGAASA 1685
            LAEMNRKNR ENFKNAS+LKPVNTGLKAGEAGYDPFSRRWTRSRNYY++K      AA A
Sbjct: 481  LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540

Query: 1686 NGDSSTASAVASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNF 1865
            NGD     A  + N                         KLVDTSAPVD+GTESN LH+F
Sbjct: 541  NGDRIGVIASGNGN-DARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHDF 599

Query: 1866 ELPISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 2045
            E+PISL  LQ+             RKQRIEATVGC+VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 600  EIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGL 659

Query: 2046 L 2048
            L
Sbjct: 660  L 660


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  733 bits (1891), Expect = 0.0
 Identities = 396/661 (59%), Positives = 464/661 (70%), Gaps = 21/661 (3%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLE LLLEAAGRT  + +N +                                   P+
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX---LYKDEDDRKKLAQ 479
            GSQVPLKKRLDPTERDDD  S +EG                      LYK+EDDR+KLAQ
Sbjct: 61   GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 480  MTELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQTNSRGVXXXXXXXXX 629
            M+ELEREMIL +RA K+ DK L E+ ++          RK +P   +SRGV         
Sbjct: 121  MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180

Query: 630  XXXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPT--- 800
                   LNE++A+RL+QQDPEAHRKLRDA         +SP+KR+ FT+A++ S +   
Sbjct: 181  AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240

Query: 801  QSASHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLI 980
            +S SHS+++ STGDGG+ADSD++     S+ PT+D+IREITIRRSKLAKWFMEP+FE+LI
Sbjct: 241  ESRSHSEDEGSTGDGGMADSDDDGEPG-SQGPTFDDIREITIRRSKLAKWFMEPWFEELI 299

Query: 981  VGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQ 1160
            VGCFVRVGIG+S+SGPIYRLC+VRNVDA+DPDR YKL+NKTTYKYLNV+WGNESSAARWQ
Sbjct: 300  VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359

Query: 1161 MAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQE 1340
            MAMISDS PT +E+ QWVREVERSGGRMP+KQ++LEKK+AI+K+NTFVYSA TVKQMLQE
Sbjct: 360  MAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQE 419

Query: 1341 KKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRL 1520
            KKSA+ RPLNVAAEKDRLR E+EVA+ K D+AEVERI+AR+QELEASRQ Q  D KAIRL
Sbjct: 420  KKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479

Query: 1521 AEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSK----HGAASAN 1688
            AEMNRKNR ENF+NAS+LKPVNT LKAGEAGYDPFSRRWTRSRNYY+SK      AA+ N
Sbjct: 480  AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATN 539

Query: 1689 GDSSTASAVAS-INXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNF 1865
             ++S   AVA+                            KLVDT+APVDQGTESN LHNF
Sbjct: 540  NEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHNF 599

Query: 1866 ELPISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 2045
            ELPISL  LQK             RKQRIEAT+GCRV END +RH LTLTVSDYKRRRGL
Sbjct: 600  ELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGL 659

Query: 2046 L 2048
            L
Sbjct: 660  L 660


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  724 bits (1870), Expect = 0.0
 Identities = 397/659 (60%), Positives = 458/659 (69%), Gaps = 19/659 (2%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLE LLLEAAGRT    +N H                                   P+
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX--LYKDEDDRKKLAQM 482
            GSQVPLKKRLDPTERDDD  S EE                      LYKDEDDR+KL++M
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 483  TELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQTNSRGVXXXXXXXXXX 632
            TEL+REMIL DRATK+ DK L  K  +          RK SP  ++SR            
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR--MRASARSADR 178

Query: 633  XXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPT---- 800
                  LNE+RAKRL+QQDPEAHR+LR+A         +SP KR+PFT+ ++ S +    
Sbjct: 179  SAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRH-FSPPKRKPFTSTSLSSSSHSES 237

Query: 801  QSASHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLI 980
            +S SHSD++ STGDGG+ DSD+++  A S+ P++ +++EITIRRSKLAKWFMEPFFE+LI
Sbjct: 238  ESRSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELI 297

Query: 981  VGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQ 1160
            VGCFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTTYKYLNVVWGNESSAARWQ
Sbjct: 298  VGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQ 357

Query: 1161 MAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQE 1340
            MAM+SDS P  EEF QWV+EV+RSGGRMPSKQ+VLEKK AIQK  TFVYSA TVKQMLQE
Sbjct: 358  MAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQE 417

Query: 1341 KKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRL 1520
            KKSA+ RPLNVAAEKDRLR E+E+A+ K DEAEVERIK RL ELEASRQA++ D KA++L
Sbjct: 418  KKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKL 477

Query: 1521 AEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGAASANGDSS 1700
            AEMNRKNR ENFKNAS++KPVNTGLKAGEAGYDPFSRRWTRSRNYY +K G  +A G++S
Sbjct: 478  AEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNS 537

Query: 1701 TASAVA---SINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFEL 1871
                VA   S                           KLVDTSAPVDQGTESN LHNFEL
Sbjct: 538  VNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFEL 597

Query: 1872 PISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
            PISLA+LQK             RKQ+IEATVG RV ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 598  PISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  719 bits (1857), Expect = 0.0
 Identities = 390/657 (59%), Positives = 456/657 (69%), Gaps = 17/657 (2%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLE LLLEAAGRT  + +N H                                   P+
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX---LYKDEDDRKKLAQ 479
            GSQVPLKKRLDP+ERDDD  S EE                       LYKDEDDR+KL++
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120

Query: 480  MTELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQTNSRGVXXXXXXXXX 629
            MTEL+REMIL DRATK+ DK L  K  +          RK SP  ++SR           
Sbjct: 121  MTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR--MRASARSAD 178

Query: 630  XXXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPT--- 800
                   LNE+RAKRL+QQDPEAHRKLR+A         +SP KR+PFT+ ++ S +   
Sbjct: 179  RSAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRH-FSPPKRKPFTSTSLSSSSHSE 237

Query: 801  -QSASHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDL 977
             +S SHSD++ STGDGG+ DSD+++    S+ P++ +I+EITIRRSKLAKWFMEPFFE+L
Sbjct: 238  SESRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 297

Query: 978  IVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1157
            IVGCFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTTYKYLNVVWGNESSAARW
Sbjct: 298  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 357

Query: 1158 QMAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQ 1337
            QMAM+SDS P  EEF QWV+EV+RSGGRMP+KQ+VLEKK AIQK  TFVYSA TVKQMLQ
Sbjct: 358  QMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQ 417

Query: 1338 EKKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIR 1517
            EKKSA+ RPLNVAAEKDRLR E+E+A+ K+DEAEV+RIKARLQELEASR A++ D KA++
Sbjct: 418  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALK 477

Query: 1518 LAEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGAASANGDS 1697
            LAEMNRKNR ENFKNAS+LKPVNTGLKAGEAGYDPFSRRWTRSRNYY  +  AA  N  +
Sbjct: 478  LAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAAGNNSVN 537

Query: 1698 STASAVASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELPI 1877
               +   + +                         KLVDTSAPVDQGTESN LHNFELPI
Sbjct: 538  GIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELPI 597

Query: 1878 SLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
            SLA+LQK             RKQRIE+TVG RV ENDGRRH+LTL+VSDYKRRRGLL
Sbjct: 598  SLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 654


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  719 bits (1857), Expect = 0.0
 Identities = 396/659 (60%), Positives = 456/659 (69%), Gaps = 19/659 (2%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLE LLLEAAGRT    +N H                                   P+
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX--LYKDEDDRKKLAQM 482
            GSQVPLKKRLDPTERDDD  S EE                      LYKDEDDR+KL++M
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 483  TELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQTNSRGVXXXXXXXXXX 632
            TEL+REMIL DRATK+ DK L  K  +          RK SP  ++SR            
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR--MRASARSADR 178

Query: 633  XXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPT---- 800
                  LNE+RAKRL+QQDPEAHR+LR+A         +SP KR+ FT+ ++ S +    
Sbjct: 179  SAKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRH-FSPPKRKTFTSTSLSSSSHSES 237

Query: 801  QSASHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLI 980
            +S SHSD++ STGDGG+ADSD+++  A S+ P++ +I+EITIRRSKLAKWFMEPFFE+LI
Sbjct: 238  ESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELI 297

Query: 981  VGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQ 1160
            VGCFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTTYKYLNVVWGNESSAARWQ
Sbjct: 298  VGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQ 357

Query: 1161 MAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQE 1340
            MAM+SDS P  EEF QWV+EV+ SGGRMPSKQ+VLEKK AIQK  TFVYSA TVKQMLQE
Sbjct: 358  MAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQE 417

Query: 1341 KKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRL 1520
            KKSA+ RPLNVAAEKDRLR E+E+A+ K+DEAEVERIK RLQELEASRQA++ D KA++L
Sbjct: 418  KKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKL 477

Query: 1521 AEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGAASANGDSS 1700
            AEMNRKNR ENFKNAS+LKPVN GLKAGEAGYDPFSRRWTRSRNYY +K G  +A G++ 
Sbjct: 478  AEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNI 537

Query: 1701 TASAVASINXXXXXXXXXXXXXXXXXXXXXXXXX---KLVDTSAPVDQGTESNGLHNFEL 1871
                VA                               KLVDTSAPVDQGTESN LHNFEL
Sbjct: 538  VNGNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFEL 597

Query: 1872 PISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
            PISLA+LQK             RKQRIE+TVG RV ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 598  PISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  714 bits (1843), Expect = 0.0
 Identities = 389/658 (59%), Positives = 451/658 (68%), Gaps = 18/658 (2%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MA+LE LLLEAAGRT    +N H                                   P+
Sbjct: 1    MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXXLYKDEDDRKKLAQMTE 488
            GSQVPLKKRLDPTE DDD  S EEG                   LYKD+DDR+KLA+MTE
Sbjct: 61   GSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSDLYKDDDDRRKLAEMTE 120

Query: 489  LEREMILEDRATKRSDKGLHEKFK---NRKGSPAQTN------SRGVXXXXXXXXXXXXX 641
            L+REMIL DRA+K+ DK L EK +   + KG   Q+       S  V             
Sbjct: 121  LQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSADRAAAK 180

Query: 642  XXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQS----A 809
               LNE+RAKRL+QQDPEAH KLRDA             KR+ +TA ++ S +QS     
Sbjct: 181  DDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDSESE 240

Query: 810  SHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLIVGC 989
            S S+++ STGDGG+ DSD+E+    S+  T+D+I+E+T+RRSKLAKW MEPFFE+LIVGC
Sbjct: 241  SQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEELIVGC 300

Query: 990  FVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAM 1169
            FVRVGIG+S+SGPIYRLC+VRNVDAS+PDRQYKLDNK T+KYLNVVWGNE+SAARWQMAM
Sbjct: 301  FVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARWQMAM 360

Query: 1170 ISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQEKKS 1349
            +SDS P  EEF QWVREVERSGGRMP+K ++L+KK++I+K NTFVYSA TVKQMLQEKKS
Sbjct: 361  VSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQEKKS 420

Query: 1350 ATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEM 1529
            A+ RPLN+A EKDRLR E+EVA+ KNDE EV+RIK RLQELEASR+A++ D KAIRLAEM
Sbjct: 421  ASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIRLAEM 480

Query: 1530 NRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGA----ASANGDS 1697
            NRKNRVENFKNAS+LKPVNTGLKAGEAGYDPFSRRWTRSRNYY+ K G     + AN  +
Sbjct: 481  NRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGANAGN 540

Query: 1698 STASAVASIN-XXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELP 1874
            + AS  A  N                          KLVDT+APVDQGT SN LHNFELP
Sbjct: 541  NGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHNFELP 600

Query: 1875 ISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
            ISL+VLQK             RKQRIEATVGCRVPENDGRRHALTL+V DYKRRRGLL
Sbjct: 601  ISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658


>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  713 bits (1841), Expect = 0.0
 Identities = 393/651 (60%), Positives = 452/651 (69%), Gaps = 11/651 (1%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLE LLLEAAGRTS   K+ H                                   P+
Sbjct: 1    MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX--LYKDEDDRKKLAQM 482
            G+QVPLKKRLDPTE DD+  S EEG                     LYKDEDDR+KLA+M
Sbjct: 61   GTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEM 120

Query: 483  TELEREMILEDRATKRSDKGLHEKFKNRKGSPAQTNSRGVXXXXXXXXXXXXXXXXLNEI 662
            +EL+RE+IL DRA K+ DK L EKF+ +K +P   +SR V                LNE+
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKKETPPLPSSR-VRSSARSADRAAAKDDALNEL 179

Query: 663  RAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQS----ASHSDEDD 830
            RAKRL+QQDPEAHRKLRDA         +S + R+ FTA    S +QS     SHS++D 
Sbjct: 180  RAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQSDSDSRSHSEDDG 239

Query: 831  STGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLIVGCFVRVGIG 1010
            STG+  + DSD+E+    S+  T+D+I+EITIRRSKLAKW MEPFFE+LIVGCFVRVGIG
Sbjct: 240  STGEDPMMDSDDER----SEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIG 295

Query: 1011 KSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSPPT 1190
            +S+SGPIYRLC+VRNVDASDPDR+YKL+NKTT+KYLNVVWGNE+SAARWQMAMISDS P 
Sbjct: 296  RSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSAPL 355

Query: 1191 REEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQEKKSATWRPLN 1370
             EEF QWVREVERSGGR+PSKQ+VLEKK+AI+K NTFVYSA TVKQM++EKKSA+ RPLN
Sbjct: 356  EEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRPLN 415

Query: 1371 VAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEMNRKNRVE 1550
            +A EKDRLR E+EVA+ K+D+AEVERIK RLQ+LEA RQ+Q  D KA+RLAEMNRKNRVE
Sbjct: 416  IALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRLAEMNRKNRVE 475

Query: 1551 NFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSK----HGAASANGDSSTASA-V 1715
            NFKNAS+LKPV TGLKAGEAGYDPFSRRWTRSRNYY+SK     G A A  D+  A A +
Sbjct: 476  NFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALADI 535

Query: 1716 ASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELPISLAVLQ 1895
             S                           KL+DTSAPVD GTESN +HNFELPISLA LQ
Sbjct: 536  ESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLATLQ 595

Query: 1896 KXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
            K             RKQRIEATVGCRVPENDGRRHALTLTVSDYKRR GLL
Sbjct: 596  KFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus]
          Length = 660

 Score =  711 bits (1836), Expect = 0.0
 Identities = 389/662 (58%), Positives = 458/662 (69%), Gaps = 22/662 (3%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLE LLLEAAGRT+   +N H                                   P+
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX---LYKDEDDRKKLAQ 479
            GSQVPLKKRLDPTERDDD  S EEG                      LYKD+DDR+KLA 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 480  MTELEREMILEDRATKRSDKGLHEKFK----------NRKGSPAQTNSRGVXXXXXXXXX 629
            M+EL+REMIL DRA+K++DK L+E  +          +RK +P   +SR +         
Sbjct: 121  MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 179

Query: 630  XXXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQSA 809
                   LNE+RAKRL+QQDPEAHRKLRDA         +SP KR+PFTA ++ S +QS 
Sbjct: 180  AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 239

Query: 810  SHS----DEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDL 977
            S S    D++ STGDGG+ DSD+E++   S  PT+++I+E+TIRRSKLAKW MEPFFE+L
Sbjct: 240  SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 299

Query: 978  IVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1157
            IVGCFVRVGIG+SRSGPIYRLC+VRNVDA++PDRQYKL+NK T+KYLNV+WGNE+SAARW
Sbjct: 300  IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 359

Query: 1158 QMAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQ 1337
            QMAM+SDS P  +E+ QWV+EVER+GGRM SKQ++LEKK+AIQK N FVYSA TVKQMLQ
Sbjct: 360  QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 419

Query: 1338 EKKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIR 1517
            +KKSA+ RPLN+AAEKDRLR EM+VA  KNDEAEVERIK RLQ+LEASR+ Q  D KAIR
Sbjct: 420  DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 479

Query: 1518 LAEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSK----HGAASA 1685
            LAEMNRKNRVENFKNAS+L+P+   LKAGEAGYDPFSRRWTRSRNYY+S     +GAA A
Sbjct: 480  LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 538

Query: 1686 NGDSSTAS-AVASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHN 1862
             G+S   + A+ +                           KLVDT+APVD GTESN LHN
Sbjct: 539  AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 598

Query: 1863 FELPISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRG 2042
            FELPISLA+LQK             RKQRIEATVG +VPENDGRRHALTLTVSDYKRRRG
Sbjct: 599  FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 658

Query: 2043 LL 2048
            LL
Sbjct: 659  LL 660


>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 658

 Score =  697 bits (1800), Expect = 0.0
 Identities = 386/661 (58%), Positives = 453/661 (68%), Gaps = 21/661 (3%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGN-DKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 305
            MADLE LLLEAAGRT G   +N H                                   P
Sbjct: 1    MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60

Query: 306  TGSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX---LYKDEDDRKKLA 476
            +GSQVPLKKRLDPTERDDD  S EE                       LYKDEDDR+KL+
Sbjct: 61   SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDRRKLS 120

Query: 477  QMTELEREMILEDRATKRSDKGLHEKFKNR----------KGSPAQTNSRGVXXXXXXXX 626
            +M+EL+REMIL DRA+K+ DK L  K  ++          K SP  ++SR          
Sbjct: 121  EMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSR--MRASARSA 178

Query: 627  XXXXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQS 806
                    LNE+RAKRL+QQDPEA R+LR+A         +SP KR+ FT+A + S + S
Sbjct: 179  DRSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRR-FSPPKRKSFTSANLSSSSHS 237

Query: 807  ----ASHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFED 974
                 SHSD++ STGDGG+ADSD+++  + S+ P++ +I+EITIRRSKLAKWFMEPFFE+
Sbjct: 238  DSDSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEE 297

Query: 975  LIVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAAR 1154
            LIVGCFVRVGIG+S++GPIYRLC+V+NVD+SDPDRQYKL+N+TT+KYLNVVWGNESSAAR
Sbjct: 298  LIVGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAAR 357

Query: 1155 WQMAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQML 1334
            WQMAM+SDS P  EEF QWV+EVERSGGRMP+KQ+VLEKK AIQK  TFVYSA+TVKQML
Sbjct: 358  WQMAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQML 417

Query: 1335 QEKKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAI 1514
            QEKKS++ RPLNVAAEKDRLR EME+A+ KNDEAEVERIK R+QELEASR A+  D KA+
Sbjct: 418  QEKKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEASRHAKVKDAKAL 477

Query: 1515 RLAEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGAASANGD 1694
            +LAEMNRKNR ENFKNAS+L+PVN GLKAGEAGYDPFSRRWTRSRNYY++K G  +A   
Sbjct: 478  KLAEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKPGEKAAARK 537

Query: 1695 SSTASAVASINXXXXXXXXXXXXXXXXXXXXXXXXX---KLVDTSAPVDQGTESNGLHNF 1865
            ++T   VA                               KLVDTSAPVDQGTESN LHNF
Sbjct: 538  NTTNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESNFLHNF 597

Query: 1866 ELPISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 2045
            ELPISLA+L K             RKQR+EATVG RV ENDGRRH LTL+V DYKRRRGL
Sbjct: 598  ELPISLALLHKYGGAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYKRRRGL 657

Query: 2046 L 2048
            L
Sbjct: 658  L 658


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  697 bits (1800), Expect = 0.0
 Identities = 380/663 (57%), Positives = 452/663 (68%), Gaps = 23/663 (3%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-P 305
            MADLE LLLEAAGRT  + +N +                                    P
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 306  TGSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX---LYKDEDDRKKLA 476
            +GSQVPLKKRL+  ERD +  S +EG                      LYKDEDDRKKLA
Sbjct: 61   SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120

Query: 477  QMTELEREMILEDRATKRSDKGLHEKFK----------NRKGSPAQTNSRGVXXXXXXXX 626
            QM+EL+RE+IL DRA K+ DK L EK +          +RK +P   +SRGV        
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 627  XXXXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQ- 803
                    LNE+RAKRL+QQDPEAHRKLRD          +S VK+  FT+A++ S +  
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSE 240

Query: 804  --SASHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDL 977
              S SHS+++ STGDGG+ADSDE+     SK PTY++I+EITIRR+KLAKWFMEP+FE+L
Sbjct: 241  SGSRSHSEDEGSTGDGGMADSDED-VEPGSKGPTYEDIKEITIRRTKLAKWFMEPWFEEL 299

Query: 978  IVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1157
            I+GCFVRVGIG+S+SGP+YRLC+VRNVDA++PD+ YKL+NK+TYKYLNV WG ++SAARW
Sbjct: 300  IIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARW 359

Query: 1158 QMAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQ 1337
            QMAM+SDS PT EE+ QWVREVE  GGR+PSKQ++LEKK+AI+K+NTFVYSA TVKQMLQ
Sbjct: 360  QMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQ 419

Query: 1338 EKKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIR 1517
            EKKSA+ RPLNVAAEKDRLR E+E+A+ K+DEAEVERI AR++ELEASR A+  D KAIR
Sbjct: 420  EKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAKAIR 479

Query: 1518 LAEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHG------AA 1679
            LAEMNRKNRVENF+NAS++KPVNTGLKAGEAGYDPFSRRWTRSRNYY+SK        A 
Sbjct: 480  LAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVAT 539

Query: 1680 SANGDSSTASAVASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLH 1859
              +  + T +  AS                           KLVDTSAPVDQGTESN +H
Sbjct: 540  KISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTESNTMH 599

Query: 1860 NFELPISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRR 2039
            +FEL ISL  LQ+             RKQRIEATVGCRVPENDGRRHALTLTV DYKRRR
Sbjct: 600  SFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRR 659

Query: 2040 GLL 2048
            GLL
Sbjct: 660  GLL 662


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  695 bits (1794), Expect = 0.0
 Identities = 379/665 (56%), Positives = 457/665 (68%), Gaps = 25/665 (3%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-P 305
            MADLE LLLEAAGRT  + +N +                                    P
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60

Query: 306  TGSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX---LYKDEDDRKKLA 476
            +GSQVPLKKRL+  ERDD+  S EEG                      LYKDEDDR+KLA
Sbjct: 61   SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120

Query: 477  QMTELEREMILEDRATKRSDKGLHEKFKN----------RKGSPAQTNSRGVXXXXXXXX 626
            QM+EL+RE+IL DRA K+ DK L EK ++          RK +P   +SRGV        
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 627  XXXXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQ- 803
                    LNE+RAKRL+QQDPEAHRKLRDA         ++ VK+  FT+A + S +  
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSE 240

Query: 804  ----SASHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFE 971
                S SHS+++ STGDGG+ADSDE+     S+ PTY++I+EITIRR+KLAKWFMEP+FE
Sbjct: 241  SESGSRSHSEDEGSTGDGGMADSDEDGDPG-SRGPTYEDIKEITIRRTKLAKWFMEPWFE 299

Query: 972  DLIVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAA 1151
            +LI+GCFVRVGIG+S++GP+YRLC+VRNVDA++PD+ YKL+NK+TYKYLNV WG +SSAA
Sbjct: 300  ELIIGCFVRVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAA 359

Query: 1152 RWQMAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQM 1331
            RWQMAM+SDS PT EE+ QWVRE ER GGR+PSKQ++LEKK+AI+K+NTFVYSA TVKQM
Sbjct: 360  RWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQM 419

Query: 1332 LQEKKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKA 1511
            LQEKKSA+ RPLNVAAEKDRLR E+E+A+ ++DEAEVERI+AR+ ELEASRQA+  D KA
Sbjct: 420  LQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAKVKDAKA 479

Query: 1512 IRLAEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSK-----HGA 1676
            +RLAEMNRKNRVENF+NAS+LKP+NTGLKAGEAGYDPFSRRWTRSRNYY+S         
Sbjct: 480  LRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPAGGDDAV 539

Query: 1677 ASANGDSSTASAVA-SINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNG 1853
            A++N +++  +AVA S +                         KLVDTSAPVDQGTESN 
Sbjct: 540  AASNSEANDTAAVADSDHVVAGAMSESGVAATAAALDAAADAGKLVDTSAPVDQGTESNT 599

Query: 1854 LHNFELPISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKR 2033
            +HNFEL ISL  LQK             RKQRIEA VGC+V ENDGRRHALTLTV DYKR
Sbjct: 600  MHNFELEISLIALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALTLTVGDYKR 659

Query: 2034 RRGLL 2048
            RRGLL
Sbjct: 660  RRGLL 664


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  694 bits (1791), Expect = 0.0
 Identities = 384/656 (58%), Positives = 442/656 (67%), Gaps = 16/656 (2%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLE LLLEAAGRT+   +N H                                   P+
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRK--PS 58

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXXLYKDEDDRKKLAQMTE 488
            GSQVPLKKRLDPTERDDD  S EEG                      +E D     QMTE
Sbjct: 59   GSQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 489  LEREMILEDRATKRSDKGLHEKFKNR---------KGSPAQTNSRGVXXXXXXXXXXXXX 641
            LEREM++ +R  K+ DK L +KF++R         K +P   +SR               
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 642  XXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQSAS--- 812
               LNE+RAKRL+QQDPEAHR+LRDA          SPVKR+ FT A + S +QS S   
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 813  -HSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLIVGC 989
             HSD++ STGDGG+ADSD++      + PTYD+I+EITIRRSKLAKWFMEPFFE+LIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 990  FVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAM 1169
            FVRVGIG+S++GPIYRLC+VRNVDA++PDR YKL+N+TT KYLNV WGNESSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 1170 ISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQEKKS 1349
            +SDSPP  EEF QW+REVER+ GRMPSKQ+VLEKKD+IQK NTFVYSA TVKQMLQEKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKS 409

Query: 1350 ATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEM 1529
            A+ RPLNVAAEKDRLR E+EVA+ ++DE ++ERIK RLQELEASR ++  D KAIRLAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 1530 NRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHG---AASANGDSS 1700
            NRKNRVENFKNAS+LK VNT LKAGEAGYDPFSRRWTRSRNYY+SK G    A ANGD +
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKN 529

Query: 1701 TASAVASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELPIS 1880
                 A  N                         KLVDT+AP+D GTESN LH+FEL IS
Sbjct: 530  GVPGGA--NGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDIS 587

Query: 1881 LAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
            L  L+K             RKQRIEATVGC+VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 588  LNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  692 bits (1785), Expect = 0.0
 Identities = 382/656 (58%), Positives = 442/656 (67%), Gaps = 16/656 (2%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLE LLLEAAGRT+   +N H                                   P+
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRK--PS 58

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXXLYKDEDDRKKLAQMTE 488
            GSQVPLKKRLDP ERDDD  S EEG                      +E D     QMTE
Sbjct: 59   GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 489  LEREMILEDRATKRSDKGLHEKFKNR---------KGSPAQTNSRGVXXXXXXXXXXXXX 641
            LEREM++ +R  K+ DK L +KF++R         K +P   +SR               
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 642  XXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQSAS--- 812
               LNE+RAKRL+QQDPEAHR+LRDA          SPVKR+ FT A + S +QS S   
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 813  -HSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLIVGC 989
             HSD++ STGDGG+ADSD++      + PTYD+I+EITIRRSKLAKWFMEPFFE+LIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 990  FVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAM 1169
            FVRVGIG+S++GPIYRLC+VRNVDA++PDR YKL+N+TT KYLNV WGNESSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 1170 ISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQEKKS 1349
            +SDSPP  EEF QW+REVER+GGRMPSKQ+VLEKK++IQK NTFVYSA TVKQMLQEKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKS 409

Query: 1350 ATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEM 1529
            A+ RPLNVAAEKDRLR E+EVA+ ++D+ ++ERIK RLQELEASR ++  D KAIRLAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 1530 NRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHG---AASANGDSS 1700
            NRKNRVENFKNAS+LK VNT LKAGEAGYDPFSRRWTRSRNYY+SK G    A ANGD +
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKN 529

Query: 1701 TASAVASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELPIS 1880
                 A  N                         KLVDT+AP+D GTESN LH+FEL IS
Sbjct: 530  GVPGGA--NGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDIS 587

Query: 1881 LAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
            L  L+K             RKQRIEATVGC+VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 588  LNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 657

 Score =  668 bits (1723), Expect = 0.0
 Identities = 371/662 (56%), Positives = 448/662 (67%), Gaps = 22/662 (3%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADL+ LLLEAAGRTS   K+ H                                   P+
Sbjct: 1    MADLDDLLLEAAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX--LYKDEDDRKKLAQM 482
            GSQVPLKKRLDP+E  D+H S +EG                     LYKDE+DR+KLA+M
Sbjct: 61   GSQVPLKKRLDPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSDLYKDENDRRKLAEM 120

Query: 483  TELEREMILEDRATKRSDKGLHEKFK----------NRKGSPAQTNSRGVXXXXXXXXXX 632
            +EL+RE+IL DRA K+ DK L EKF+          +RK +P   +SR V          
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSR-VRSSARSADRA 179

Query: 633  XXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQS-- 806
                  LNE+RAKRL+QQDPEAHRKLRD          +S   ++ F+A    S +QS  
Sbjct: 180  AAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSSSQSDS 239

Query: 807  --ASHSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLI 980
               SHSD+D S+ D  + DSD+E+ +   +  T+++I+EITIRRS+LAKW MEPFFE+LI
Sbjct: 240  ESRSHSDDDGSSADDAI-DSDDERGN---QGLTFEDIKEITIRRSRLAKWLMEPFFEELI 295

Query: 981  VGCFVRVGIGKSRSG-PIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARW 1157
            VGC VRVGIGK++SG PIYRLC V NVD+SDPDRQYKL+NKTT+KYLNVVWGNE+SAARW
Sbjct: 296  VGCCVRVGIGKTKSGRPIYRLCSVCNVDSSDPDRQYKLENKTTHKYLNVVWGNENSAARW 355

Query: 1158 QMAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQ 1337
            QMAM+SDS P  EE+DQWVREVE++GGR+PSK++VLEKK+AI+KTNTFVYSA+TVKQM+Q
Sbjct: 356  QMAMVSDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAKTVKQMIQ 415

Query: 1338 EKKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIR 1517
            EKKSA+ RPLN+A EKDRLR E+E+A+ K+D+AEVERIKARL++LEA +Q+Q  D KA+R
Sbjct: 416  EKKSASSRPLNIALEKDRLRRELEIAQSKHDDAEVERIKARLEQLEARQQSQGKDSKAVR 475

Query: 1518 LAEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGAASANGDS 1697
            LAEMNRKNRV+NFKNAS LKPV TGLKAGEAGYDPFSRRWTRSRNYY+SK      + ++
Sbjct: 476  LAEMNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDEQKDDAEA 535

Query: 1698 STASA-----VASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHN 1862
            +  +A     V +                           KL+DT APVDQGT SN LHN
Sbjct: 536  NAVAAESLAEVETNGTGGVVAVRAGLEATAAALEAAAGAGKLIDTMAPVDQGTSSNPLHN 595

Query: 1863 FELPISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRG 2042
            FELPISLA LQK             RKQRIEATVG RVPE+DGRRHALTL+VSDYKRRRG
Sbjct: 596  FELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRG 655

Query: 2043 LL 2048
            LL
Sbjct: 656  LL 657


>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 653

 Score =  638 bits (1646), Expect = e-180
 Identities = 359/661 (54%), Positives = 431/661 (65%), Gaps = 21/661 (3%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLEKLLLEAAGR   N  +                                     P+
Sbjct: 1    MADLEKLLLEAAGR---NIHSLTPSRRKRRGEFLDGGSDSGDDDSDDDGDDHGYRGRKPS 57

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXXLYKDEDDRKKLAQMTE 488
             +QVPLKKR + + +DDD S +++G                   LYKDEDDR+KL++MTE
Sbjct: 58   ATQVPLKKRFETSGKDDDVSGDDDGSDREGDSSEDSDVGDD---LYKDEDDRQKLSEMTE 114

Query: 489  LEREMILEDRATKRSDKGLHEKF--KNRKGSPAQTNSRG----------VXXXXXXXXXX 632
            L+REMIL DRA+K+ DK    K   K  KG+ A  + R           V          
Sbjct: 115  LQREMILSDRASKKDDKDFLGKIASKREKGAKATLSRRESPPPPLLSSRVRASARSADRS 174

Query: 633  XXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQS-- 806
                  LNE+RAKRL+Q DPEA  KL++             +K +PF +  + S + S  
Sbjct: 175  AAKDGALNELRAKRLKQLDPEAKLKLKEGSKSGGRGLF--SLKGKPFASTGLSSSSHSDS 232

Query: 807  --ASHSDEDDSTGDGGLADSDEEK--TSAESKWPTYDEIREITIRRSKLAKWFMEPFFED 974
               S SD++ S GDGG+ DSD+++  T +  + P++++I+EITIRRSKLAKWFMEPFFE+
Sbjct: 233  DSRSRSDDEGSNGDGGIIDSDDDRIMTGSGFEVPSFEDIKEITIRRSKLAKWFMEPFFEE 292

Query: 975  LIVGCFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAAR 1154
            LIVGCFVRVGIG+S++GPIYRLC+V+NVDASDPDRQYKLDNKTTYKYLNVVWGNE+SAAR
Sbjct: 293  LIVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRQYKLDNKTTYKYLNVVWGNETSAAR 352

Query: 1155 WQMAMISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQML 1334
            WQMAM+SDSPP  EEF QWV+EVERSGGRM  K +V+EK  AIQK N+FVYSA TVKQM+
Sbjct: 353  WQMAMVSDSPPLEEEFKQWVKEVERSGGRMLMKLDVMEKNQAIQKINSFVYSAATVKQMI 412

Query: 1335 QEKKSATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAI 1514
            +EKKS + RPLNVAAEKDRL+ ++E+A+ K D AEVE+IK RLQELEASR+ Q  D KA+
Sbjct: 413  EEKKSNSRRPLNVAAEKDRLKRQLEIAESKKDAAEVEKIKTRLQELEASRKTQAKDAKAL 472

Query: 1515 RLAEMNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGAASANGD 1694
            RL+EMNRKNR ENFKNAS+LKPVN GLKAGEAGYDPFSRRWTRSRNYY +K    +A G+
Sbjct: 473  RLSEMNRKNRFENFKNASELKPVNKGLKAGEAGYDPFSRRWTRSRNYYNAKQAEEAAAGN 532

Query: 1695 SSTASAV---ASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNF 1865
            +S+  AV    S                           KLVDT APVDQGTESN LHNF
Sbjct: 533  NSSGGAVGDRGSNGVGATVAGEAGVVATAEALEAAADAGKLVDTRAPVDQGTESNFLHNF 592

Query: 1866 ELPISLAVLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 2045
            ELPISL +LQK             +KQRIE  VG RVPENDG+ H LTLTVSDYKRRRGL
Sbjct: 593  ELPISLTILQKFGGAQGVHAGFIAKKQRIEEIVGFRVPENDGKSHMLTLTVSDYKRRRGL 652

Query: 2046 L 2048
            L
Sbjct: 653  L 653


>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
          Length = 643

 Score =  625 bits (1612), Expect = e-176
 Identities = 346/646 (53%), Positives = 424/646 (65%), Gaps = 9/646 (1%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            MADLEKLLLEAAGRT+ +++N                                     P+
Sbjct: 1    MADLEKLLLEAAGRTTTSERNR---PPSRRRRKHSNSDGGSDSRNDDSDGDHHYSQRKPS 57

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXXLYKDEDDRKKLAQMTE 488
             SQVPLKKR DPT+RDD   S+++G                   LYKDE+DR+KL+++TE
Sbjct: 58   SSQVPLKKRFDPTDRDD--RSSQDGDEINSNHERDSDNDTIGSDLYKDEEDREKLSKLTE 115

Query: 489  LEREMILEDRATKRSDKGLHEKFKNRKG-----SPAQTNSRGVXXXXXXXXXXXXXXXXL 653
            LEREMILE RATK SD+ L EK K RKG     SPA+ ++R                   
Sbjct: 116  LEREMILEGRATKISDRDLTEKLKKRKGHDKKLSPAKAHTRSS----------------- 158

Query: 654  NEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQSASHSD--ED 827
               +A+R    D E  ++ RDA         YSPVKRR FTAAT+ SP+ S S S   E 
Sbjct: 159  TRSKAERAGALD-ELVKRRRDAVKGGTTRSRYSPVKRRSFTAATLSSPSHSDSRSQSGEG 217

Query: 828  DSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLIVGCFVRVGI 1007
            +STGDGG+ DSDE+KT ++S  PT+D+I+EIT++RSKL KWFMEPFF++LI+GCFV+VGI
Sbjct: 218  ESTGDGGIGDSDEDKTQSQSNVPTFDDIKEITVQRSKLLKWFMEPFFDELIIGCFVKVGI 277

Query: 1008 GKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSPP 1187
            GKSRSG +YRLC+VRNVD+SDP R Y  +N+ T+KYL++VWG+ESSAARWQM MIS+  P
Sbjct: 278  GKSRSGNVYRLCVVRNVDSSDPSRAYDFENRKTHKYLSLVWGSESSAARWQMKMISNEAP 337

Query: 1188 TREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQEKKSATWRPL 1367
             REEFD W +EVER+GG MP++QEV EK++A+Q+ N FVYSA TVKQM+QEKKSAT +P+
Sbjct: 338  KREEFDLWFKEVERTGGNMPTRQEVSEKREALQRINRFVYSAATVKQMVQEKKSATHKPI 397

Query: 1368 NVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRLAEMNRKNRV 1547
            NVA EKDRLR  MEVA+  +D  E++ I+ +L ELE+SR+  E D KA +LAEMN KNR 
Sbjct: 398  NVALEKDRLRRAMEVARENDDHDEMKEIQRKLSELESSRKVPEKDSKAAKLAEMNSKNRK 457

Query: 1548 ENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSK--HGAASANGDSSTASAVAS 1721
             NFKNAS++KPVNT LKAGE GYDPFSRRWTRSRNYY+S    G   ANG ++ AS  A+
Sbjct: 458  ANFKNASEMKPVNTSLKAGEVGYDPFSRRWTRSRNYYVSNAATGIGEANGSANVASVAAT 517

Query: 1722 INXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELPISLAVLQKX 1901
                                       KLVDT+APVDQGTESN LH+FELPISLA LQ+ 
Sbjct: 518  ----------------AAALEAAAGAGKLVDTNAPVDQGTESNLLHDFELPISLAALQRL 561

Query: 1902 XXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRR 2039
                        RKQ IEA  G +VPENDGRRHALTLTVSDYKRRR
Sbjct: 562  GGPQGAQAGLMARKQWIEANYGVKVPENDGRRHALTLTVSDYKRRR 607


>ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum]
            gi|557088572|gb|ESQ29352.1| hypothetical protein
            EUTSA_v10023338mg [Eutrema salsugineum]
          Length = 644

 Score =  621 bits (1602), Expect = e-175
 Identities = 336/654 (51%), Positives = 430/654 (65%), Gaps = 14/654 (2%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            M DL+ LLLEAAGRT+   ++ H                                   P+
Sbjct: 1    MVDLDDLLLEAAGRTNAPGRSRHSHPPSSRRREGSYSDGGSDSRDDSDEERGYASRK-PS 59

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX--LYKDEDDRKKLAQM 482
            GSQVPLKKRL+  ER+D  + +E G                     LYK+E+DR+KLA M
Sbjct: 60   GSQVPLKKRLE-AEREDRAARDEAGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 118

Query: 483  TELEREMILEDRATKRSDKGLHEKFKNRKG------SPAQTN----SRGVXXXXXXXXXX 632
            TE +REMIL +RA K+ DK   EK ++++       S  +T     SRGV          
Sbjct: 119  TEFQREMILAERADKKGDKNFTEKLRSKREKEKTPVSKKETQPLPASRGVRSSARSADRA 178

Query: 633  XXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQSAS 812
                  LNE+RAKR++QQ+P + RKLRDA         +S +KR+P  ++ + + +QS S
Sbjct: 179  AAKDDALNELRAKRMKQQEPASLRKLRDASKGGSGSRDFSSMKRKPLASSNLSNSSQSDS 238

Query: 813  --HSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLIVG 986
               S  DD   +GG+ DSD++++      PT+++I++ITIRRSKLAKW MEPFFE+LIVG
Sbjct: 239  DSRSQSDDEGSNGGMVDSDDDRSDV----PTFEDIKDITIRRSKLAKWLMEPFFEELIVG 294

Query: 987  CFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMA 1166
            CFVRVGIG+S++GPIYRLC+V+NVDA+DPD+ YKL+NKTT+KYLN +WG+ESSAARWQMA
Sbjct: 295  CFVRVGIGRSKNGPIYRLCMVKNVDATDPDKTYKLENKTTHKYLNCIWGHESSAARWQMA 354

Query: 1167 MISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQEKK 1346
            MISD  P  EE+ QW+REVER+ GRMP+KQ++ EKK+AI++ N+FVYSAETVKQMLQEKK
Sbjct: 355  MISDGYPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIKRINSFVYSAETVKQMLQEKK 414

Query: 1347 SATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRLAE 1526
            SA+ RP+N+AAEKDRLR E+EVA++KNDEA VERIKA++++LEASR+ +E+D+KA++LAE
Sbjct: 415  SASVRPMNIAAEKDRLRKELEVAQIKNDEAGVERIKAKIKQLEASREKKEVDKKALKLAE 474

Query: 1527 MNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGAASANGDSSTA 1706
            MN+KNR ENFKNAS++K +   LKAGEAGYDPFSRRWTRS NYY  K       G  + A
Sbjct: 475  MNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKR----KEGGDTEA 530

Query: 1707 SAVASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELPISLA 1886
            +A A++                          KL+DT AP+ QG E N LHNFELP+SL 
Sbjct: 531  TAAAAVETNGAAAGENGVEATEAALEAAADAGKLIDTRAPIGQGAEHNLLHNFELPLSLT 590

Query: 1887 VLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
             LQK             RKQ  EATVGCRV ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 591  ALQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 644


>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
            gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
            78902-80833 [Arabidopsis thaliana]
            gi|332195649|gb|AEE33770.1| Paf1C-like transcription
            factor [Arabidopsis thaliana]
          Length = 643

 Score =  620 bits (1599), Expect = e-174
 Identities = 339/654 (51%), Positives = 426/654 (65%), Gaps = 14/654 (2%)
 Frame = +3

Query: 129  MADLEKLLLEAAGRTSGNDKNHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 308
            M DLE LLLEAAGRT+   ++ H                                   P+
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGSSDSRDDSDEDRGYASRK---PS 57

Query: 309  GSQVPLKKRLDPTERDDDHSSNEEGXXXXXXXXXXXXXXXXXXX--LYKDEDDRKKLAQM 482
            GSQVPLKKRL+  ER+D  +  E G                     LYK+E+DR+KLA M
Sbjct: 58   GSQVPLKKRLE-AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116

Query: 483  TELEREMILEDRATKRSDKGLHEKFKNRKGS---PAQTN-------SRGVXXXXXXXXXX 632
            TE +REMIL +RA K+ DK   EK ++++ S   P           SRGV          
Sbjct: 117  TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176

Query: 633  XXXXXXLNEIRAKRLRQQDPEAHRKLRDAXXXXXXXXXYSPVKRRPFTAATIGSPTQSAS 812
                  LNE+RAKR++QQDP A RKLRDA         +S  KR+P  ++ + S +QS S
Sbjct: 177  AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236

Query: 813  --HSDEDDSTGDGGLADSDEEKTSAESKWPTYDEIREITIRRSKLAKWFMEPFFEDLIVG 986
               S  DD   +GG+ DSD++++      PT+++++E+TIRRSKLAKW MEPFFE+LIVG
Sbjct: 237  DSRSQSDDEGSNGGMLDSDDDRSDV----PTFEDVKEVTIRRSKLAKWLMEPFFEELIVG 292

Query: 987  CFVRVGIGKSRSGPIYRLCIVRNVDASDPDRQYKLDNKTTYKYLNVVWGNESSAARWQMA 1166
            CFVRVGIG+S+SGPIYRLC V+NVDA+DPD+ YKL+NKTT+KYLNVVWGNE+SAARWQMA
Sbjct: 293  CFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMA 352

Query: 1167 MISDSPPTREEFDQWVREVERSGGRMPSKQEVLEKKDAIQKTNTFVYSAETVKQMLQEKK 1346
            MISD  P  EE+ QW+REVER+ GRMP+KQ++ EKK+AIQ+TN+FVYSAETVKQMLQEKK
Sbjct: 353  MISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKK 412

Query: 1347 SATWRPLNVAAEKDRLRTEMEVAKMKNDEAEVERIKARLQELEASRQAQEMDRKAIRLAE 1526
            SA+ RP+NVAAEKDRLR E+E+A+ KNDEA VERIK+++++L+ASR  + +D+KA++LAE
Sbjct: 413  SASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLAE 472

Query: 1527 MNRKNRVENFKNASQLKPVNTGLKAGEAGYDPFSRRWTRSRNYYMSKHGAASANGDSSTA 1706
            MN+KNR ENFKNAS++K +   LKAGEAGYDPFSRRWTRS NYY  K+     +G+ + A
Sbjct: 473  MNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKN--KGKDGEENEA 530

Query: 1707 SAVASINXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNGLHNFELPISLA 1886
            +  A++                          KL+DT AP+ QG E N LHNFEL +SL 
Sbjct: 531  AVAAAVE-TNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLT 589

Query: 1887 VLQKXXXXXXXXXXXXXRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 2048
             LQK             RKQ  EATVGCRV ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 590  ALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643