BLASTX nr result
ID: Rauwolfia21_contig00005557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00005557
(974 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub... 310 7e-82
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I... 310 7e-82
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu... 296 8e-78
gb|EMJ03728.1| hypothetical protein PRUPE_ppa010980mg [Prunus pe... 289 1e-75
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri... 289 1e-75
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr... 289 1e-75
gb|EOY09046.1| Eukaryotic rpb5 RNA polymerase subunit family pro... 289 1e-75
ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, I... 288 3e-75
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 287 4e-75
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I... 287 4e-75
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub... 286 6e-75
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I... 285 2e-74
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I... 284 4e-74
ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, I... 281 2e-73
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin... 279 1e-72
gb|ESW34110.1| hypothetical protein PHAVU_001G125200g [Phaseolus... 277 4e-72
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ... 277 5e-72
gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea] 275 1e-71
gb|AFK43162.1| unknown [Medicago truncatula] 275 3e-71
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun... 268 2e-69
>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 310 bits (793), Expect = 7e-82
Identities = 150/228 (65%), Positives = 189/228 (82%)
Frame = -1
Query: 911 IDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELS 732
+D N M++D +N G CL SF+D G+VESHRY+L+RRT+LEML+DRG+ +PN+EI+ +
Sbjct: 1 MDLNGLAMDVD-GDNLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTT 59
Query: 731 LQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLT 552
LQ+FREKY Q PDV RLR+SA++++D +N+VLV++CGPN VKVN IR I QIMN E+L+
Sbjct: 60 LQEFREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLS 119
Query: 551 RLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXK 372
RLIL+IQNQ+T+ AMKAVELF+FKVEIFQITDLLVNITKHVLKPRH+ K
Sbjct: 120 RLILVIQNQMTNPAMKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKK 179
Query: 371 YSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
Y++EEKQLPR+ +KDAIARYYGLEKGQV+KVTY+S+ E HVTYRCVW
Sbjct: 180 YNLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCVW 227
>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 310 bits (793), Expect = 7e-82
Identities = 150/228 (65%), Positives = 189/228 (82%)
Frame = -1
Query: 911 IDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELS 732
+D N M++D EN G CL SF+D G+VESHRY+L+RRT+LEML+DRG+ +PN+EI+ +
Sbjct: 1 MDLNGLAMDVD-GENLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTT 59
Query: 731 LQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLT 552
LQ+FREKY Q PDV RLR+SA++++D +N+VLV++CGPN VKVN IR I QIMN E+L+
Sbjct: 60 LQEFREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLS 119
Query: 551 RLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXK 372
RLIL+IQNQ+T+ A+KAVELF+FKVEIFQITDLLVNITKHVLKPRH+ K
Sbjct: 120 RLILVIQNQMTNPALKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKK 179
Query: 371 YSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
Y++EEKQLPR+ +KDAIARYYGLEKGQV+KVTY+S+ E HVTYRCVW
Sbjct: 180 YNLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCVW 227
>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
gi|550320761|gb|EEF05018.2| hypothetical protein
POPTR_0016s03800g [Populus trichocarpa]
Length = 243
Score = 296 bits (758), Expect = 8e-78
Identities = 144/215 (66%), Positives = 175/215 (81%)
Frame = -1
Query: 872 ENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELSLQDFREKYTQDPD 693
E+ GRCL SF+D+GS ESHRYYLSRRTVLEML+DRGY VP++EI++SLQDFR Y Q+PD
Sbjct: 29 ESLGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPD 88
Query: 692 VSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLTRLILIIQNQITSQ 513
+ L+ SA +K DPS R+LV++CG VVKV IRLI QI + ++LT LIL++QN IT+Q
Sbjct: 89 IELLKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQ 148
Query: 512 AMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIEEKQLPRILK 333
AMKA++LF FK+EIFQITDLLVNITKH+LKP+HQ KYSIEEKQLPR+LK
Sbjct: 149 AMKALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLK 208
Query: 332 KDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
KDAI+RYYGLE+GQV+KVTY+ D T HVTYRCVW
Sbjct: 209 KDAISRYYGLERGQVVKVTYDGDITGSHVTYRCVW 243
>gb|EMJ03728.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
Length = 228
Score = 289 bits (740), Expect = 1e-75
Identities = 145/227 (63%), Positives = 173/227 (76%), Gaps = 1/227 (0%)
Frame = -1
Query: 905 ENAAEMEMDYS-ENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELSL 729
E AE D + E G CL ++D GS ESHRYYLSRRTVLEM+RDRGY VP++EI+LSL
Sbjct: 2 EGDAEANGDANGEILGPCLTGYVDDGSPESHRYYLSRRTVLEMIRDRGYSVPSSEIDLSL 61
Query: 728 QDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLTR 549
QDFR + Q+PDV RLR SA ++ DPS+R++V+YCGP +VKVN IR + QI N +TL
Sbjct: 62 QDFRALHGQNPDVERLRFSATHRTDPSDRIMVIYCGPGIVKVNVIRGLHSQIANKDTLNG 121
Query: 548 LILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKY 369
LILI QNQITSQA+K +EL+ FK EIFQITDLLVNITKHVLKP+H KY
Sbjct: 122 LILITQNQITSQALKTMELYPFKTEIFQITDLLVNITKHVLKPKHHVLTEQEKQKLLKKY 181
Query: 368 SIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
+IEE QLPR+ +KDAIA+YYGLEKGQV+KVTY D TE HVTYRC+W
Sbjct: 182 NIEENQLPRLSRKDAIAQYYGLEKGQVVKVTYTGDITESHVTYRCIW 228
>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 238
Score = 289 bits (740), Expect = 1e-75
Identities = 140/215 (65%), Positives = 172/215 (80%)
Frame = -1
Query: 872 ENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELSLQDFREKYTQDPD 693
E G+C S+ D G+ E+HRYYLSRRTVLEMLRDRGY VP++EI+LSLQ+FR + +PD
Sbjct: 24 EGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPD 83
Query: 692 VSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLTRLILIIQNQITSQ 513
+ RL+ SA + DPS R+LVL+ GP ++KV+TIR I QI+N ++LT LIL++QNQIT+Q
Sbjct: 84 IDRLKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQ 143
Query: 512 AMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIEEKQLPRILK 333
AMKAV+LF FKVE+FQITDLLVNITKHVLKP+HQ Y IEEKQLPR+L+
Sbjct: 144 AMKAVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCIEEKQLPRLLR 203
Query: 332 KDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
KDAIARYYGLEKGQV+KVTY+ + TE HVTYRCVW
Sbjct: 204 KDAIARYYGLEKGQVVKVTYSGEITESHVTYRCVW 238
>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
RNA polymerase V subunit 5A-like isoform X1 [Citrus
sinensis] gi|557544341|gb|ESR55319.1| hypothetical
protein CICLE_v10021999mg [Citrus clementina]
Length = 236
Score = 289 bits (739), Expect = 1e-75
Identities = 149/228 (65%), Positives = 174/228 (76%), Gaps = 5/228 (2%)
Frame = -1
Query: 896 AEMEMDYSENFG-----RCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELS 732
+ MEM+ + CL F+D GS +S RYYLSRRTVLEML+DRGY V +EI LS
Sbjct: 9 SSMEMEGGNGYNGEPTESCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLS 68
Query: 731 LQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLT 552
+QDFR Y QDPDV RLRIS ++ DPS R+LV++CGP +VKVN IR I QI+N +TLT
Sbjct: 69 VQDFRAIYGQDPDVDRLRISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLT 128
Query: 551 RLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXK 372
LILI+QNQITSQA KAV LF FKVE+FQITDLLVNITKHVLKP+HQ K
Sbjct: 129 GLILILQNQITSQATKAVGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKK 188
Query: 371 YSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
YSIEEKQLPR+LKKDAIA+YYGLE+GQV+KVTY+ + TE HVTYRCVW
Sbjct: 189 YSIEEKQLPRMLKKDAIAQYYGLERGQVVKVTYSGEITESHVTYRCVW 236
>gb|EOY09046.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 228
Score = 289 bits (739), Expect = 1e-75
Identities = 145/228 (63%), Positives = 174/228 (76%)
Frame = -1
Query: 911 IDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELS 732
++ N E + E G+CL +D GS ESHRYYLSRRTVLEMLRDRGY VP +EI LS
Sbjct: 1 MEGNGLEGDGSNGEALGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLS 60
Query: 731 LQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLT 552
LQ+FR Y Q PD RLR+SA +K DPS R+LV++ GP +VKV+ IRLI I N E+LT
Sbjct: 61 LQEFRAIYGQSPDFDRLRLSATHKTDPSKRILVVFYGPGMVKVSGIRLIAGLITNKESLT 120
Query: 551 RLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXK 372
LIL++QN IT+QA+KA++LF+FKVEIFQITDLLVNITKHVLKP+HQ K
Sbjct: 121 GLILVLQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQKLLQK 180
Query: 371 YSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
YSIEEKQLPR+LKKDAIARYYG E+GQV+KV Y+ + T+ HVTYRCVW
Sbjct: 181 YSIEEKQLPRLLKKDAIARYYGYERGQVVKVMYDGEITQSHVTYRCVW 228
>ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 288 bits (736), Expect = 3e-75
Identities = 143/228 (62%), Positives = 180/228 (78%)
Frame = -1
Query: 911 IDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELS 732
+D N + ME+D N CL SF+D G+VESHRY+L+R+T+LEML+DRG+ +PN+EIE +
Sbjct: 1 MDVNGSAMEVDVV-NVSPCLTSFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIETT 59
Query: 731 LQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLT 552
LQ+FREKY Q PDV RLRISA+++ D +N+VLV++CGPN VK+N IR I QIMN E+L+
Sbjct: 60 LQEFREKYGQRPDVERLRISAMHRTDLTNKVLVIFCGPNSVKMNVIRNILSQIMNKESLS 119
Query: 551 RLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXK 372
RLILII+N +T+ AMK VE FK EIFQITDLLVNITKHVLKP+H+ K
Sbjct: 120 RLILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNAEKEQLLKK 179
Query: 371 YSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
Y++EEKQLPR+ +KDAIARYYGLEKGQV+KVTYN++ E H TYRCVW
Sbjct: 180 YNLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHATYRCVW 227
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 287 bits (735), Expect = 4e-75
Identities = 137/211 (64%), Positives = 172/211 (81%)
Frame = -1
Query: 860 RCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELSLQDFREKYTQDPDVSRL 681
RCL SF+D+G +ESHRYYL+RRT+LEMLRDRGY +P +I++SLQDFR Y+Q PD RL
Sbjct: 120 RCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRL 179
Query: 680 RISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLTRLILIIQNQITSQAMKA 501
RISA + DPS ++LV++CGP+VVKVN IR I QI+N ++L++LIL++QN ITSQA+KA
Sbjct: 180 RISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKA 239
Query: 500 VELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIEEKQLPRILKKDAI 321
V+LF+F+VE FQITDLLVNITKHVLKP+H+ KYS+ EKQLPR+L++DAI
Sbjct: 240 VDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAI 299
Query: 320 ARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
ARYYGLEKGQV+KV YN + T HVTYRCVW
Sbjct: 300 ARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 330
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 229
Score = 287 bits (735), Expect = 4e-75
Identities = 137/211 (64%), Positives = 172/211 (81%)
Frame = -1
Query: 860 RCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELSLQDFREKYTQDPDVSRL 681
RCL SF+D+G +ESHRYYL+RRT+LEMLRDRGY +P +I++SLQDFR Y+Q PD RL
Sbjct: 19 RCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRL 78
Query: 680 RISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLTRLILIIQNQITSQAMKA 501
RISA + DPS ++LV++CGP+VVKVN IR I QI+N ++L++LIL++QN ITSQA+KA
Sbjct: 79 RISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKA 138
Query: 500 VELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIEEKQLPRILKKDAI 321
V+LF+F+VE FQITDLLVNITKHVLKP+H+ KYS+ EKQLPR+L++DAI
Sbjct: 139 VDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAI 198
Query: 320 ARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
ARYYGLEKGQV+KV YN + T HVTYRCVW
Sbjct: 199 ARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 229
>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 286 bits (733), Expect = 6e-75
Identities = 141/228 (61%), Positives = 180/228 (78%)
Frame = -1
Query: 911 IDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELS 732
+D N + ME+D N CL SF+D G+VESHRY+L+R+T+LEML+DRG+ +PN+EI+ +
Sbjct: 1 MDVNGSAMEVDVV-NVSPCLASFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIDTT 59
Query: 731 LQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLT 552
LQ+FREKY Q PD RLRISA+++ D +N+VLV++CGPN VK+N IR I QIMN E+L+
Sbjct: 60 LQEFREKYGQRPDAERLRISAMHRTDLTNKVLVIFCGPNSVKMNVIRSILSQIMNKESLS 119
Query: 551 RLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXK 372
RLILII+N +T+ AMK VE FK EIFQITDLLVNITKHVLKP+H+ K
Sbjct: 120 RLILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNTEKEQLLKK 179
Query: 371 YSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
Y++E+KQLPR+ +KDAIARYYGLEKGQV+KVTYN++ E HVTYRCVW
Sbjct: 180 YNLEDKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHVTYRCVW 227
>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 227
Score = 285 bits (728), Expect = 2e-74
Identities = 144/228 (63%), Positives = 173/228 (75%)
Frame = -1
Query: 911 IDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELS 732
++E+ E E + E FG CL S+ID G+ ESHRY+LSRRTV+EML+DRGY + + I+ S
Sbjct: 1 MEEDGFEAEPNPVE-FGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFS 59
Query: 731 LQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLT 552
LQ FRE + Q PDV RL++SA + DPS RVLV++CG VKVN IR I QI N ++L
Sbjct: 60 LQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH 119
Query: 551 RLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXK 372
LILI+QNQIT+QAMKAVELF+FKVEIFQITDLLVNITKH LKP HQ +
Sbjct: 120 GLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQ 179
Query: 371 YSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
YSIEEKQLPR+L+ DAIARYYGLEKGQV+KVTY+ D T H+TYRCVW
Sbjct: 180 YSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCVW 227
>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 225
Score = 284 bits (726), Expect = 4e-74
Identities = 139/212 (65%), Positives = 168/212 (79%)
Frame = -1
Query: 863 GRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELSLQDFREKYTQDPDVSR 684
G CL F+D GS ESHRY+LSRRTVLEMLRDRGY VP++EI+LSLQDFR + Q+PD R
Sbjct: 14 GPCLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDFRSLHGQNPDADR 73
Query: 683 LRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLTRLILIIQNQITSQAMK 504
L S ++ DPS R+LV+YCGP +VKVN IR + QI N +TL+ LILI+Q QITSQA+K
Sbjct: 74 LCFSTVHSSDPSERMLVIYCGPGIVKVNVIRGLHSQIANKDTLSGLILILQGQITSQALK 133
Query: 503 AVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIEEKQLPRILKKDA 324
++L+ FKVEIFQITDLLVNITKHVLKP+HQ K++IEEKQLPRI +KDA
Sbjct: 134 TLDLYPFKVEIFQITDLLVNITKHVLKPQHQVLTEQAKQALLKKFNIEEKQLPRISQKDA 193
Query: 323 IARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
IA+YYGLE+GQV+KVTY+ D T+ HVTYRCVW
Sbjct: 194 IAKYYGLERGQVVKVTYSGDITKGHVTYRCVW 225
>ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 244
Score = 281 bits (720), Expect = 2e-73
Identities = 142/230 (61%), Positives = 176/230 (76%)
Frame = -1
Query: 917 MEIDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIE 738
MEI EN + S+ G+CL + ID GSVESHRYYLSRRT LEML+DRGY +P +EI+
Sbjct: 16 MEI-ENGDALPQVQSQEQGKCLITKIDDGSVESHRYYLSRRTTLEMLKDRGYSIPPSEIQ 74
Query: 737 LSLQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGET 558
LSL +FR+ + PDV RLR +A + +PS R+LV++ GP +VKVN +R I QI+N +T
Sbjct: 75 LSLHEFRQTHGHSPDVDRLRFTATHTTNPSKRILVIFSGPGIVKVNVVRNIAGQIVNRDT 134
Query: 557 LTRLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXX 378
LT LILI+Q+QITSQA+KAV L +FKVEIFQITDLLVNITKHVLKP+HQ
Sbjct: 135 LTGLILIVQSQITSQALKAVNLLSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKKNLL 194
Query: 377 XKYSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
KY+I+EKQLPR+L+ DAIARYYGLE+GQV+KVTY + T+ HVTYRCVW
Sbjct: 195 KKYNIQEKQLPRMLQTDAIARYYGLERGQVVKVTYTGEITQMHVTYRCVW 244
>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
gi|255627335|gb|ACU14012.1| unknown [Glycine max]
Length = 237
Score = 279 bits (713), Expect = 1e-72
Identities = 139/220 (63%), Positives = 169/220 (76%)
Frame = -1
Query: 887 EMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELSLQDFREKY 708
E + +E CL F+D GSVESHRYYLSRRT LEML+DRGY +P+ EI+LSL DFR+ +
Sbjct: 18 EEEEAEQAKGCLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIH 77
Query: 707 TQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLTRLILIIQN 528
Q PD RLR+S + + S R+LV++CGP VVKV IR QI+N +TLT LILI++N
Sbjct: 78 GQFPDPDRLRLSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVEN 137
Query: 527 QITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIEEKQL 348
ITSQA+KAV LF+FKVEIFQITDLLVNITKHVLKP+HQ KY+IEEKQL
Sbjct: 138 HITSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQL 197
Query: 347 PRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
PR+L+ DAIARYYGLE+GQV+KVTY+ + T+ HVTYRCVW
Sbjct: 198 PRMLQTDAIARYYGLERGQVVKVTYSGEVTQMHVTYRCVW 237
>gb|ESW34110.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
Length = 242
Score = 277 bits (709), Expect = 4e-72
Identities = 136/220 (61%), Positives = 168/220 (76%)
Frame = -1
Query: 887 EMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELSLQDFREKY 708
E + +E CL FID G+VESHRYYLSRRT LEML+DRGY +P+ EI+LSL FR +
Sbjct: 23 EQEETEQVKGCLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLSLSQFRHMH 82
Query: 707 TQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLTRLILIIQN 528
PD RLR+S + +PS R+LV++CGP VVKV IR I QI+N +TL+ LILI++N
Sbjct: 83 GHSPDPDRLRLSLAHATNPSKRILVIFCGPGVVKVTAIRNIAGQIVNRDTLSGLILIVEN 142
Query: 527 QITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIEEKQL 348
+TSQA+KAV LF+FKVEIFQITDLLVNITKHVLKP+HQ K++IEEKQL
Sbjct: 143 HVTSQALKAVGLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNLLKKFNIEEKQL 202
Query: 347 PRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
PR+L+ DAIARYYGLE+GQV+KVTY+ + T+ HVTYRCVW
Sbjct: 203 PRMLQTDAIARYYGLERGQVVKVTYSGEITQMHVTYRCVW 242
>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
polymerase subunit, RPB5; RNA polymerase Rpb5,
N-terminal [Medicago truncatula]
gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
I, II, and III subunit RPABC1 [Medicago truncatula]
Length = 248
Score = 277 bits (708), Expect = 5e-72
Identities = 144/241 (59%), Positives = 178/241 (73%)
Frame = -1
Query: 950 TETKIW*G*KTMEIDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRD 771
TET I TMEI+ + E +CL + D GS+ESHRYYLSRRTVLEML+D
Sbjct: 13 TETAI----TTMEIENGDITTQPQLQEQ-PQCLFTKKDNGSIESHRYYLSRRTVLEMLKD 67
Query: 770 RGYLVPNAEIELSLQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIR 591
RGY +P+ EI+LSL DFR+ + Q PDV RLR++A + +PS R+LV++ GP +VKVN +R
Sbjct: 68 RGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRILVVFSGPGIVKVNGVR 127
Query: 590 LIGQQIMNGETLTRLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQ 411
I QI+N E+LT LILI+QNQITSQA+KAV L +FKVEIFQITDLLVN TKHVLKP+HQ
Sbjct: 128 DIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEIFQITDLLVNATKHVLKPKHQ 187
Query: 410 XXXXXXXXXXXXKYSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCV 231
KY I+EKQLPR+L+ DAIARYYGL++GQV+KVTY + T+ HVTYRCV
Sbjct: 188 VLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVTYRCV 247
Query: 230 W 228
W
Sbjct: 248 W 248
>gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]
Length = 241
Score = 275 bits (704), Expect = 1e-71
Identities = 136/241 (56%), Positives = 180/241 (74%), Gaps = 11/241 (4%)
Frame = -1
Query: 917 MEIDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIE 738
M+++E A + ++ EN G CL SF+D+GS+ESHRYYL+R+T+LEML+DRG+ + A+I+
Sbjct: 1 MKVEEAAIDETLEDDENLGTCLSSFVDKGSLESHRYYLARKTLLEMLKDRGFAISPADID 60
Query: 737 LSLQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGET 558
++LQ+FR ++++ P V L+I+AL+ DDPS +VLVL+CGP +VKVN IR I + N T
Sbjct: 61 ITLQEFRIRHSESPSVDGLKITALHGDDPSIKVLVLFCGPGIVKVNQIRAIAGDVYNNGT 120
Query: 557 LTRLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXX 378
++ LIL+ Q++ITSQA+KAV + FKVEIFQITDLLVNITKH LKP+HQ
Sbjct: 121 ISSLILVAQSKITSQALKAVNILKFKVEIFQITDLLVNITKHDLKPKHQILSAEEKADLL 180
Query: 377 XKYSIEEKQ-----------LPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCV 231
KYSIEEKQ LPR+L+KDAIARYYGLEKGQV+KVTY + T+ HVTYRCV
Sbjct: 181 SKYSIEEKQASKSKKASEAFLPRMLQKDAIARYYGLEKGQVVKVTYGGELTQLHVTYRCV 240
Query: 230 W 228
W
Sbjct: 241 W 241
>gb|AFK43162.1| unknown [Medicago truncatula]
Length = 248
Score = 275 bits (702), Expect = 3e-71
Identities = 143/241 (59%), Positives = 177/241 (73%)
Frame = -1
Query: 950 TETKIW*G*KTMEIDENAAEMEMDYSENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRD 771
TET I TMEI+ + E +CL + D GS+ESHRYYLSRRTVLEML+D
Sbjct: 13 TETAI----TTMEIENGDITTQPQLQEQ-PQCLFTKKDNGSIESHRYYLSRRTVLEMLKD 67
Query: 770 RGYLVPNAEIELSLQDFREKYTQDPDVSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIR 591
RGY +P+ EI+LSL DFR+ + Q PDV RLR++A + +PS R+LV++ GP +VKVN +R
Sbjct: 68 RGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRILVVFSGPGIVKVNGVR 127
Query: 590 LIGQQIMNGETLTRLILIIQNQITSQAMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQ 411
I QI+N E+LT LILI+QNQITSQA+KAV L +FKVEI QITDLLVN TKHVLKP+HQ
Sbjct: 128 DIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEILQITDLLVNATKHVLKPKHQ 187
Query: 410 XXXXXXXXXXXXKYSIEEKQLPRILKKDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCV 231
KY I+EKQLPR+L+ DAIARYYGL++GQV+KVTY + T+ HVTYRCV
Sbjct: 188 VLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVTYRCV 247
Query: 230 W 228
W
Sbjct: 248 W 248
>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 231
Score = 268 bits (686), Expect = 2e-69
Identities = 132/215 (61%), Positives = 164/215 (76%)
Frame = -1
Query: 872 ENFGRCLGSFIDQGSVESHRYYLSRRTVLEMLRDRGYLVPNAEIELSLQDFREKYTQDPD 693
E G CL S ID+GSVESHRY+LSR T+LEML+DRGY VP+++I LSL DFR+ Y Q PD
Sbjct: 17 ETLGTCLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDINLSLHDFRQIYGQIPD 76
Query: 692 VSRLRISALYKDDPSNRVLVLYCGPNVVKVNTIRLIGQQIMNGETLTRLILIIQNQITSQ 513
V RLR S + DPS R+LV++C P VVKV ++R I QI+N TLT LIL++Q+Q+T+Q
Sbjct: 77 VDRLRFSVTHLSDPSKRILVIFCEPGVVKVTSVRGIAGQIVNRNTLTGLILVLQSQMTNQ 136
Query: 512 AMKAVELFTFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIEEKQLPRILK 333
A KAVEL FKVEIFQITDLL+NITKH+L+P+H+ KYSIE KQLPR+ K
Sbjct: 137 AQKAVELLPFKVEIFQITDLLINITKHLLRPKHRVLTDQEKQKLLKKYSIEVKQLPRMSK 196
Query: 332 KDAIARYYGLEKGQVLKVTYNSDFTEQHVTYRCVW 228
DAIARYYGLEKGQV+K+ Y+ T+ ++TYRCVW
Sbjct: 197 NDAIARYYGLEKGQVVKIIYSGGITDSYITYRCVW 231