BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00004905
         (4955 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   615   e-173
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        612   e-172
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   611   e-171
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        604   e-169
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   600   e-168
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   600   e-168
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     598   e-168
gb|ABA95357.2| retrotransposon protein, putative, unclassified [...   584   e-163
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   584   e-163
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   579   e-162
gb|ABD78322.1| polyprotein [Primula vulgaris]                         576   e-161
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   566   e-158
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...   565   e-158
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      561   e-156
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...   561   e-156
gb|AAX95226.1| retrotransposon protein, putative, unclassified [...   558   e-156
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...   558   e-156
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]   557   e-155
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                555   e-154
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g...   554   e-154

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  615 bits (1587), Expect = e-173
 Identities = 304/631 (48%), Positives = 417/631 (66%), Gaps = 10/631 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F  LK  +   PVLALP+F + F++E DAC  G+GAVLMQ G+PIA++SKALGPK+   S
Sbjct: 324  FTELKGKLCTSPVLALPNFEQPFVIEADACEVGIGAVLMQAGRPIAYYSKALGPKAAAQS 383

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
             YEKE MA+  A+  W+HY+ G   +I+TD QSLK+++ Q++    Q K L KL+  ++ 
Sbjct: 384  IYEKEAMAILEALKRWRHYVLGGELVIKTDQQSLKYMMNQRLVEGIQHKLLLKLMEYNYT 443

Query: 362  VQYKKGAENKVADALSRKWE--------CLAISAVIPAWVEDVIGSYETDSEIQSIIARV 517
            ++YK G EN VADALSR  +        C AI+ V+P W+ D+  SYE D +   +++ +
Sbjct: 444  IEYKAGRENLVADALSRSPKNKEEVTELCAAIAVVVPEWILDIKRSYEEDVQAHKLLSLI 503

Query: 518  TL--QQEANYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKV 691
                  E  Y ++ G+++++G IYVG TG IR +++ A H+S  GGH G++ATY RIKK+
Sbjct: 504  GTAGDPEGEYKFEAGIMKYKGRIYVGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKL 563

Query: 692  FYWPKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEG 871
            FYWP L +               K EHV            +  + H++MDF+EGLPKS+G
Sbjct: 564  FYWPGLKKGVENHIRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKG 623

Query: 872  KDVVLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFW 1051
            KDV+LVVVDR TK++HFI L+HP+T  +V   FMD ++KLHGMP +IV+DRD+VFTS F+
Sbjct: 624  KDVILVVVDRLTKYAHFIALSHPYTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFF 683

Query: 1052 QELFSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNT 1231
            QE+F    V+L+ S+AYHPQTDGQTERVNQC+E YLRC +   P  W  +++LAEWWYNT
Sbjct: 684  QEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNT 743

Query: 1232 SFHSAIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNR 1411
            ++H+AI+M+PF+ALYGYSP    E  V  +V        LEE++ I   L+ ++  A  R
Sbjct: 744  TYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQ-EARVTLEEKETIVQKLKASMEDAQRR 802

Query: 1412 MKQYADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYK 1591
            MK YAD  RTER  EVGD V++KLQPY+Q++   R + KL  KY+GPF+VLEK+G+VAY+
Sbjct: 803  MKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYR 862

Query: 1592 LSLPATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKP 1771
            L LP  + IH VFHVSQLKK +G       +LP    +GQ+  EPVA+L RR++ + N  
Sbjct: 863  LQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVA 922

Query: 1772 AVQWLIQWSTLTLEDATWEFANEFMKKWPAF 1864
              QWLI WS LT  +ATWE A+   K +P F
Sbjct: 923  VTQWLILWSNLTPAEATWEDASYIQKVFPNF 953



 Score =  366 bits (940), Expect = 5e-98
 Identities = 172/309 (55%), Positives = 224/309 (72%)
 Frame = +1

Query: 4009 EEGKQSSDIQPLLEEFGDVFEKPRGLPPSREHEHSIILVEGAKPFKLRSYRLPHYQKTEI 4188
            EE    +D+Q +L +F  V ++P+GLPP R  +H I L  G++P   R YR+PHYQK  +
Sbjct: 8    EEAAVPADVQEVLSQFPGVMKEPKGLPPRRACDHVINLKPGSEPPNQRPYRVPHYQKEAM 67

Query: 4189 EKQVSEMLQEGVIQXXXXXXXXXIILVKKKDGSWRFCIDYRQLNALTVKDKFPIPMVDDL 4368
            E  +S+++Q   I+          I+V+K+DGSWR C+DYRQLNA TVK+KFP+P+++DL
Sbjct: 68   ENIISDLIQSKEIRFSDSPYACPAIMVRKRDGSWRMCVDYRQLNAQTVKNKFPMPIIEDL 127

Query: 4369 LDELHGAQFFSKIDLRSGYFQIRMKESDIPKTAFSTHFGHFEFKVMPFGLTNAPATFQSL 4548
            LDELHGA+ FSK+DLRSGY QIRM E DIPKTAF TH GH+E++VMPFGLTNAPATFQSL
Sbjct: 128  LDELHGARIFSKLDLRSGYHQIRMAEEDIPKTAFKTHMGHYEYQVMPFGLTNAPATFQSL 187

Query: 4549 MNKVFGPYLRKFVLVFFDDILIYSTDLSYHLLHLRIVLTVLREHQLFGKMSKCIFGQHEV 4728
            MN+   P+LRKFVLVFF DILIYS     H+ H++ VL VL ++QL  ++ KC FG   V
Sbjct: 188  MNQALAPFLRKFVLVFFYDILIYSKTREEHIKHIKAVLQVLEKNQLVVRLKKCAFGLSSV 247

Query: 4729 EYLGHLISGEGVRADPKKIEEMTNWPSPLTVKQLRGFLGLTGYYRRFIKSYGIVSKPLTN 4908
             YLGH+IS +GV  DP KI ++ N   P  V ++R FLG+TGYYRRFIK YG++ +PL +
Sbjct: 248  AYLGHVISSDGVATDPSKISDIMNRKEPKNVTEVREFLGMTGYYRRFIKGYGLICRPLHD 307

Query: 4909 LLKKNSFQW 4935
            +LKK  F W
Sbjct: 308  MLKKGGFNW 316


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  612 bits (1577), Expect = e-172
 Identities = 298/626 (47%), Positives = 416/626 (66%), Gaps = 5/626 (0%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F+ LK  M   PVL+LPDFTK+F++E DAC NG+GAVLMQ G+P+A+FSK LGPK+   S
Sbjct: 960  FETLKTHMCTSPVLSLPDFTKEFVIEADACGNGIGAVLMQSGRPLAYFSKTLGPKAAAQS 1019

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
             YEKE MA+  A+ +W+HY+ G+  II+TD QSLKF++ Q++    Q K L KL+   + 
Sbjct: 1020 IYEKEAMAILEALKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYS 1079

Query: 362  VQYKKGAENKVADALSR---KWECLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQ-- 526
            ++YK G EN VADALSR     +C AI+ VIP WV D+  SYE D +   I++ +  +  
Sbjct: 1080 IEYKAGKENLVADALSRIPPAEQCQAITTVIPEWVRDIQRSYEGDVQAHKILSLIGTEGD 1139

Query: 527  QEANYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYWPK 706
             + +YS + G+LR++G IYVG    IR+ ++ + H+S  GGHSGM+ATY RIK +FYWP 
Sbjct: 1140 TDGSYSQEAGLLRYKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIKSLFYWPG 1199

Query: 707  LWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDVVL 886
            L +               K EH+            +  +AH+TMDF+EGLPKS GKDV+L
Sbjct: 1200 LKKAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVIL 1259

Query: 887  VVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQELFS 1066
            VVVDR TK++HFI + HP+T  +V   FM+ +++LHGMP +I++DRD++FTS  +QE+F 
Sbjct: 1260 VVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFK 1319

Query: 1067 VSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFHSA 1246
               V+LK S++YHPQTDGQTERVNQC+E YLR  +   P  WH +L+LAEWWYNT++H++
Sbjct: 1320 SMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTS 1379

Query: 1247 IKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQYA 1426
            I+M+PF+ALYGY P    E  V  NV        +E++  I   L+ +LT A  R+K YA
Sbjct: 1380 IQMTPFQALYGYPPPQINEFSVPCNVSE-EARVTIEQKDAIIQKLKYSLTEAQRRIKHYA 1438

Query: 1427 DTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSLPA 1606
            D  R+ER+  VGD V++KLQPY+Q++   R + KL +K++GPF+++EK+G VAYKL LP 
Sbjct: 1439 DRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPE 1498

Query: 1607 TSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQWL 1786
             S IH VFHVSQLKK +G       +LP    +GQ+  EPVA+L RR++ +      QWL
Sbjct: 1499 GSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWL 1558

Query: 1787 IQWSTLTLEDATWEFANEFMKKWPAF 1864
            + W  L+  +ATWE A+     +P+F
Sbjct: 1559 VLWHNLSPSEATWEDASMIQSMFPSF 1584



 Score =  511 bits (1316), Expect = e-141
 Identities = 284/752 (37%), Positives = 426/752 (56%), Gaps = 6/752 (0%)
 Frame = +1

Query: 2707 GGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEMFVRAL 2886
            G +P +W+ +  +++++   P    + LA  +++G+A  W +          W  +   +
Sbjct: 215  GEDPIDWLKQCEKFYEISGTPAEQWVNLAIAHLQGKAMKWYRGIGIPWQLITWPQWCAMV 274

Query: 2887 FERFAEGTTGESVGEFSKLKQ-SGSVGEYMRRFEELKSLFACTHARMPADFYVSLFLSGL 3063
              RF+   T E+V  F  +KQ + +V +Y+ +FEE   L    H  +   +  S F+ GL
Sbjct: 275  STRFSAADTHEAVELFQNVKQYNQTVEQYIDKFEEYVDLVRREHPYLQEQYLNSCFIGGL 334

Query: 3064 KEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAKPKLISQTNVISKGGQELQKTSFTSKL 3243
            + +I+  V   +P  L +++    + E+     K  L    N        +Q  +  ++ 
Sbjct: 335  RGDIKHDVCGHKPQGLLESYWYTKNYERAANARKNLLNFNRNRFQNQAGPIQGRNVVNRG 394

Query: 3244 PLKEPIKFKKISNEEMQRRRELGLCFKCGEKYSPQHKCALSEVNMLIVSEWIEEQDNGGE 3423
              +E ++           ++E   C+ C E + P+H+C + +    ++ E  E +D G E
Sbjct: 395  QPREQVE-----------KKEERKCWFCKEPWFPKHQCKVKKALNALLMEGEEGKDEGEE 443

Query: 3424 LSLLQXXXXXXXXXXXXXXTDGIQ-----LSLSAISGTINGTTFRIVGRIKGREVIMLID 3588
              L                 D  Q     +S +A+ GT    TF ++ +I GR  + L+D
Sbjct: 444  GELTGNQEDCKLEKEEAPPDDENQEELMFVSHNAVYGTTRPDTFSVIIQINGRRAVGLVD 503

Query: 3589 TGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQELEFCQDLYE 3768
            +GST +F+D+    +   P   +    + +  G    + V    + + +Q   F      
Sbjct: 504  SGSTSTFMDQDYAVRNHCPLVSTDAKKVVVAGGGELKSEVQVPELVYQIQGETFSNKFNI 563

Query: 3769 WKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNSHRTVELKAIEAEHLPK 3948
              L G D+ILG DW+ +YSP+T D KK+EL   KG K V IQ+  R  +   ++++ + +
Sbjct: 564  IPLKGYDVILGADWIYKYSPITLDLKKRELGITKGEKTVVIQDFTRPGKHLWVDSKKVDQ 623

Query: 3949 WLDRAAEVWLGQLCGVTVEHEEGKQSSDIQPLLEEFGDVFEKPRGLPPSREHEHSIILVE 4128
             L +     L Q+  V  E    +   DI+ +L+EF  V + P+GLPP R  +H I L  
Sbjct: 624  ILRKGGLGCLFQITRVKEEETSHEIPEDIKEILQEFPAVLKDPKGLPPRRNCDHVITLKS 683

Query: 4129 GAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVKKKDGSWRFCIDY 4308
            GA+P  LR YR+PHYQK  +EK ++E+++   IQ          ++V+KKDGSWR C+DY
Sbjct: 684  GAEPPNLRPYRVPHYQKEAMEKIIAELIESKEIQVSDIPYSSPAVMVRKKDGSWRLCVDY 743

Query: 4309 RQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESDIPKTAFSTHFGH 4488
            RQLNA TVK+KFP+P+++DLLDEL+GA+ FSK+DLRSGY QIRM   DIPKTAF TH GH
Sbjct: 744  RQLNAQTVKNKFPMPIIEDLLDELNGAKVFSKLDLRSGYHQIRMATQDIPKTAFRTHLGH 803

Query: 4489 FEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLSYHLLHLRIVLTV 4668
            +E++VMPFGLTNAP TFQSLMN+V  P+LRK+VLVFFDDILIYS D + H  H+R V+ V
Sbjct: 804  YEYQVMPFGLTNAPTTFQSLMNQVLAPFLRKYVLVFFDDILIYSKDWAEHKEHIRQVMKV 863

Query: 4669 LREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSPLTVKQLRGFLGL 4848
            L E++L  K+ KC FG   V YLGH+IS +GV  DPKK+E++  +P+P +V  LR FLG+
Sbjct: 864  LEENKLVVKLKKCAFGLPSVTYLGHIISQDGVATDPKKVEKIATYPTPKSVTDLRKFLGM 923

Query: 4849 TGYYRRFIKSYGIVSKPLTNLLKKNSFQWSTE 4944
            TGYYRRFIK+YGIV +PL ++LKK  FQW  E
Sbjct: 924  TGYYRRFIKNYGIVCRPLHDMLKKEGFQWERE 955


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  611 bits (1575), Expect = e-171
 Identities = 302/628 (48%), Positives = 421/628 (67%), Gaps = 7/628 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F+ LK+ M   PVLALPDF++ F++ETDAC  G+GAVLMQ+G+P+A+FSKALGPK+   S
Sbjct: 983  FELLKEKMCNSPVLALPDFSQPFVIETDACGIGIGAVLMQKGRPLAYFSKALGPKAAAQS 1042

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
             YEKE +A+  A+ +W+HY+ G S II+TD QSLKF++ Q++    Q K L KL+   + 
Sbjct: 1043 VYEKEAIAILEALKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYV 1102

Query: 362  VQYKKGAENKVADALSR-----KWECLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQ 526
            ++YK G EN VADALSR     + +CL I+ V+P WV+D+  SYE D     I++ +   
Sbjct: 1103 IEYKSGKENLVADALSRSPNLKEEQCLPITVVVPEWVQDIKRSYEEDIFAHKILSLIETD 1162

Query: 527  --QEANYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYW 700
               E +Y  + G+L+++G IYVG T  IR  +++A H S  GGHSG++ATY RIK++FYW
Sbjct: 1163 GDPERHYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYW 1222

Query: 701  PKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDV 880
            P L +               K EH+            +  + H+TMDFIEGLPKS+GKDV
Sbjct: 1223 PGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDV 1282

Query: 881  VLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQEL 1060
            +LVVVDR TK++HF+ L+HP+T  +V   FMD ++KLHGMP  IV+DRD+VFTS+F+QE+
Sbjct: 1283 ILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEI 1342

Query: 1061 FSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFH 1240
            F    VKL+ S+A+HPQTDGQTERVNQC+E YLR  +   P  W  +L+LAEWWYNT++H
Sbjct: 1343 FKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYH 1402

Query: 1241 SAIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQ 1420
            ++I+M+PF+ALYGY P    E  +  N+        LE++  I   L+ ++  A  R+K 
Sbjct: 1403 TSIQMTPFQALYGYPPPQITEFAIPCNMSE-EARVTLEDKALILQKLKSSIGEAQRRIKF 1461

Query: 1421 YADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSL 1600
            YAD  R+ER+ E+GD V++KLQPY+Q ++  R + KL +KY+GPF+V+EK+G+VAYKL L
Sbjct: 1462 YADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQL 1521

Query: 1601 PATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQ 1780
            P  + IH VFHVSQLKK +G       +LP    +GQ+  EP A+L RR++ + N+P  Q
Sbjct: 1522 PDGAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQ 1581

Query: 1781 WLIQWSTLTLEDATWEFANEFMKKWPAF 1864
            WLI W  LT  +ATWE A+     +P F
Sbjct: 1582 WLILWENLTPAEATWEDASYIQAAFPNF 1609



 Score =  491 bits (1263), Expect = e-135
 Identities = 275/763 (36%), Positives = 430/763 (56%), Gaps = 10/763 (1%)
 Frame = +1

Query: 2695 STICGGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEMF 2874
            S   G +P +W+ +  ++F++   P    + LA  ++ G A  W +          W  +
Sbjct: 235  SLFTGEDPVDWLKQCEKFFEITGTPVDQWVNLAVAHLYGRAAKWFRGVGLPWQVITWPQW 294

Query: 2875 VRALFERFAEGTTGESVGEFSKLKQSG-SVGEYMRRFEELKSLFACTHARMPADFYVSLF 3051
               +  RF+   T E+V  F  +KQ G +V +Y+ +FEE   L    H  +   ++ S F
Sbjct: 295  CAMVCTRFSTANTHEAVELFQNVKQYGMTVEQYIDKFEEYMDLVRRDHPYLQEPYFTSCF 354

Query: 3052 LSGLKEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAKPKLISQTNVISKGGQELQKTSF 3231
            +SGL+ +I+  V   +P  L +++  A + EK     K       N +  GG    K  +
Sbjct: 355  ISGLRGDIKHDVCGQKPQGLLESYWYAKNYEKAANSRKAAANFNRNRLQTGGNT-GKNVY 413

Query: 3232 TSKLPLKEPIKFKKISNEEMQRRRELGLCFKCGEKYSPQHKCALSE-VNMLIVS--EWIE 3402
                P +E  K            +E   C+ C E + P+H+C + + ++ L+V   E +E
Sbjct: 414  NKGQPRQEGDK------------KEEKKCWFCKEPWFPRHQCKVKQAIHALLVENEESVE 461

Query: 3403 EQDNGGELSLLQXXXXXXXXXXXXXXTDGIQ-----LSLSAISGTINGTTFRIVGRIKGR 3567
             +++  E   ++              T+ +Q     +S SA+ G     TF ++ ++ G+
Sbjct: 462  VEEDSVEEEEIKGEKQGEKLPEQ---TENVQEELMSISQSAVYGLTRPDTFSVMIKVNGK 518

Query: 3568 EVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQELE 3747
            + + L+D+GST +F+D +   + +     ++   + +  G    + ++  G+ + +Q   
Sbjct: 519  KAVGLVDSGSTTTFMDSKFAIKSQCTLENTKMRKVIVAGGGELKSELIVPGMEYEIQGES 578

Query: 3748 FCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNSHRTVELKAI 3927
            F        L   D+ILG DW+ +YSP+T D +K+E+   KGG+ + IQ+  +  +   +
Sbjct: 579  FTNSFNLLSLERYDIILGADWIFKYSPITLDLRKREMKITKGGRELEIQDFTKPGKYFQV 638

Query: 3928 EAEHLPKWLDRAAEVWLGQLCGVTVEHE-EGKQSSDIQPLLEEFGDVFEKPRGLPPSREH 4104
              + + K + + A   + Q+  +T +   E     DIQ +L+ F  V ++P+GLPP R  
Sbjct: 639  SNKKMGKMIKKGALGCVIQINAITDQSNVEVGIPKDIQIVLQSFPKVLKEPKGLPPRRSC 698

Query: 4105 EHSIILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVKKKDG 4284
            +H I L  G++P  LR YR+PH+QK  +E  ++E+ +   I+          ++V+KKDG
Sbjct: 699  DHVINLKVGSEPPNLRPYRVPHFQKGAMEDIITELFRTQEIRISDSPYVSPAVMVRKKDG 758

Query: 4285 SWRFCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESDIPKT 4464
            SWR C+DYRQLNA T+K+KFP+P+++DLLDELHGA+ FSK+DLRSGY QIRM E DIPKT
Sbjct: 759  SWRLCVDYRQLNAQTIKNKFPMPIIEDLLDELHGAKVFSKLDLRSGYHQIRMAEGDIPKT 818

Query: 4465 AFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLSYHLL 4644
            AF TH GH+E+ VMPFGLTNAPATFQ+LMN+V  P+LRKFVLVFF DILIYS   S HL 
Sbjct: 819  AFRTHLGHYEYNVMPFGLTNAPATFQALMNQVLAPFLRKFVLVFFADILIYSKTQSEHLE 878

Query: 4645 HLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSPLTVK 4824
            H+++V+  L  +QL  ++ KC FG   V YLGH+IS EGV  DPKKI ++ N   P  V 
Sbjct: 879  HIKLVMQALSANQLVVRLKKCEFGLDRVSYLGHIISSEGVSTDPKKISDIKNRKPPKNVT 938

Query: 4825 QLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKNSFQWSTEAEQ 4953
            ++R FLG+ GYYRRFIK YG++ +PL +LLKK+ F+W    ++
Sbjct: 939  EVREFLGMAGYYRRFIKGYGVICRPLHDLLKKDGFKWGDTQQE 981


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  604 bits (1557), Expect = e-169
 Identities = 292/626 (46%), Positives = 413/626 (65%), Gaps = 5/626 (0%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F  +K  ++  PVLA+P+FT+ FI+E DA   G+GAVLMQ  +P+A+FSKA+GPK+ G+S
Sbjct: 685  FATIKDKLAHAPVLAMPNFTQPFILEADASGTGLGAVLMQNNRPLAYFSKAIGPKAAGLS 744

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TY+KE +A+  A+ +WKHY  G S IIRTD  SLK++ EQ+++   Q K L KLL   ++
Sbjct: 745  TYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRLTEGIQHKLLIKLLSYDYK 804

Query: 362  VQYKKGAENKVADALSR---KWECLAISAVIPAWVEDVIGSYETDSEIQSIIA--RVTLQ 526
            ++YKKG ENK ADALSR     +  + + ++P W+ +++ SY TD +  ++ +  R+T Q
Sbjct: 805  IEYKKGKENKAADALSRIPSVAQLFSTTIIVPTWITEILASYATDPKCTALESQLRITPQ 864

Query: 527  QEANYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYWPK 706
                Y+   G+LR++  +YVG    +R ++  + H+S  GGHSG +ATY R K +FYWP 
Sbjct: 865  GHPPYTLTSGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPG 924

Query: 707  LWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDVVL 886
            + +D            +NK EH             E  + H++MDFIEGLPKS+ KDV+ 
Sbjct: 925  MKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIW 984

Query: 887  VVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQELFS 1066
            V+VDRFTK++HF+ L+HPFTA ++  +F++  YK HG+P  IVSDRD++FTS  W+++F 
Sbjct: 985  VIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQTWKDVFE 1044

Query: 1067 VSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFHSA 1246
             +GVKL  SSAYHPQTDGQTERVNQC+E YLRC +  +P  W   L+ A+WWYNTSFH+ 
Sbjct: 1045 KAGVKLHFSSAYHPQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYAKWWYNTSFHTT 1104

Query: 1247 IKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQYA 1426
            + M+P++AL+G  P    E  +  ++         E +  I A ++ +L  A  RMK +A
Sbjct: 1105 LGMTPYQALHGVPPPLLAESFLSPSL-FTDARNKAEAKSVITAAIKSSLLKAQARMKHFA 1163

Query: 1427 DTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSLPA 1606
            D  RTER   VGD V++K+QPY+ +S+   S+ KL +KY+GPF+VLE+IGSVAYKL LPA
Sbjct: 1164 DMNRTERVLTVGDMVYLKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIGSVAYKLLLPA 1223

Query: 1607 TSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQWL 1786
            +S+IH VFHVSQLKK +G     +  LP T   G +L +P A+L+RRL+ Q N P VQW 
Sbjct: 1224 SSQIHPVFHVSQLKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWK 1283

Query: 1787 IQWSTLTLEDATWEFANEFMKKWPAF 1864
            +QW+ L L  ATWE A    K +PAF
Sbjct: 1284 VQWANLPLSAATWEDAAFISKVFPAF 1309



 Score =  241 bits (614), Expect = 3e-60
 Identities = 112/178 (62%), Positives = 134/178 (75%)
 Frame = +1

Query: 4420 GYFQIRMKESDIPKTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFF 4599
            GY QIRM  +DI KTAFSTH GHFE+ VMPFGLTNAPATFQ+LMN +  PYLRKFVLVFF
Sbjct: 506  GYHQIRMHPADIYKTAFSTHMGHFEYLVMPFGLTNAPATFQALMNSILAPYLRKFVLVFF 565

Query: 4600 DDILIYSTDLSYHLLHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPK 4779
            DDILIYS  LS H+ H+ +VL +LR+H L  K SKC+FGQ +VEYLG++IS  GV  DP 
Sbjct: 566  DDILIYSPSLSDHVTHVELVLQLLRQHHLSAKPSKCVFGQSQVEYLGYIISNAGVAIDPT 625

Query: 4780 KIEEMTNWPSPLTVKQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKNSFQWSTEAEQ 4953
            K++ + NWP P +V  L GFLGL GYYR+FIK +G++ KPL   LKK  F W  E +Q
Sbjct: 626  KVQAVKNWPVPKSVTDLSGFLGLAGYYRKFIKDFGLICKPLFTALKKTGFTWQDEQQQ 683



 Score = 90.9 bits (224), Expect = 5e-15
 Identities = 58/196 (29%), Positives = 90/196 (45%)
 Frame = +1

Query: 2692 FSTICGGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEM 2871
            F T  G  P  W+ K  +YF L+Q P+  K+ LA++++ G A  W +S      +  W  
Sbjct: 292  FPTFEGDYPESWIRKAEKYFSLYQTPEEDKVLLAEVHISGRADQWIESSAVPTASLSWPE 351

Query: 2872 FVRALFERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELKSLFACTHARMPADFYVSLF 3051
            F   + +RFA  +  E    F  LKQ GSV  Y+ +FEE  +L   ++  +  D+++  F
Sbjct: 352  FKTMVCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEETMALVKRSNPTLTEDYFLDYF 411

Query: 3052 LSGLKEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAKPKLISQTNVISKGGQELQKTSF 3231
            +SGLK  I+ P++     SL  A+  A + +   + A    I                  
Sbjct: 412  ISGLKGHIKRPLKSLSIYSLVTAYEHARNYDVIPRSANTSSIPSNRE------------- 458

Query: 3232 TSKLPLKEPIKFKKIS 3279
            T K+P K P K  K S
Sbjct: 459  TPKIPPKHPTKDDKQS 474


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  600 bits (1548), Expect = e-168
 Identities = 295/625 (47%), Positives = 419/625 (67%), Gaps = 4/625 (0%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F  +K  ++Q PVLA+PDF+  FI+E DA  +G+GAVLMQ G+P+A+ SKA+GPK+  +S
Sbjct: 241  FDAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALS 300

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TY+KE +A+  A+ +WKHY  G S IIRTD  SLK++ EQ+I+   Q K L KLL   ++
Sbjct: 301  TYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYK 360

Query: 362  VQYKKGAENKVADALSRKWE--CLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQQEA 535
            ++YKKG ENK ADALSR  +   L  + ++P W+ +V  SY TD +   + + + +  ++
Sbjct: 361  IEYKKGQENKAADALSRMQQLNALTTTVIVPQWITEVAASYSTDPKCHELESHLHIAPQS 420

Query: 536  N--YSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYWPKL 709
            +  Y+ K G+LR++  I VG    +R++++ + H+S  GGHSG +ATY R+K++FYWP +
Sbjct: 421  HPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGM 480

Query: 710  WEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDVVLV 889
                           +NK EH             E  ++H+TMDF+EGLPKSEGKDV+ V
Sbjct: 481  KLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWV 540

Query: 890  VVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQELFSV 1069
            +VDRFTK++HFI L+HPFTA ++  +F++  YKLHG+P  IVSDRD++FTS  W+E+F  
Sbjct: 541  IVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEK 600

Query: 1070 SGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFHSAI 1249
            +GVKL  SSAYHPQTDGQ+ERVNQC+E YLRC +S +P  W   L  AEWWYNT+FH+++
Sbjct: 601  AGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSL 660

Query: 1250 KMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQYAD 1429
             MSP++AL+G  P    E ++L      G     E +  +   ++ +L  A  RMK +AD
Sbjct: 661  GMSPYQALHGIKPPLLAE-LLLPGSLLEGERNKQEAKAALLETIKSHLVKAQARMKYFAD 719

Query: 1430 TKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSLPAT 1609
              R ER+ EVGD V++K+QPY+ +S+   S+ KL ++Y+GPF+VLE+IGSVAYKL LP T
Sbjct: 720  QHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVT 779

Query: 1610 SKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQWLI 1789
            S+IH VFHVSQLKK +G     ++ LP    EG++L  P+A+LDRRL+ + N+P VQW I
Sbjct: 780  SQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKI 839

Query: 1790 QWSTLTLEDATWEFANEFMKKWPAF 1864
             W+ L    ATWE A    K +P+F
Sbjct: 840  HWANLPESAATWEDAAFITKVFPSF 864



 Score =  338 bits (868), Expect = 1e-89
 Identities = 154/231 (66%), Positives = 189/231 (81%)
 Frame = +1

Query: 4261 ILVKKKDGSWRFCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRM 4440
            ILVKKKDG+WR C+DYRQLNA T+K+K+PIP+++DLLDEL GAQ FSKIDLRSGY QIRM
Sbjct: 9    ILVKKKDGTWRLCVDYRQLNASTIKNKYPIPVIEDLLDELQGAQIFSKIDLRSGYHQIRM 68

Query: 4441 KESDIPKTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYS 4620
              +D+ KTAFSTH GHFE+ VMPFGLTNAPATFQ+LMNK+  PYLRKFVLVFFDDILIYS
Sbjct: 69   HAADVHKTAFSTHLGHFEYLVMPFGLTNAPATFQALMNKILAPYLRKFVLVFFDDILIYS 128

Query: 4621 TDLSYHLLHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTN 4800
               + H  HL +VL +LR HQLF K SKC+FGQ +VEYLG++IS  GV  DP K++ + N
Sbjct: 129  KSATEHAQHLSLVLQLLRHHQLFAKPSKCVFGQDQVEYLGYIISSSGVATDPVKVQAVQN 188

Query: 4801 WPSPLTVKQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKNSFQWSTEAEQ 4953
            WP+P ++ +LRGFLGL GYYRRFIK++GI+ +P+ + LKKN+F W    +Q
Sbjct: 189  WPTPTSITELRGFLGLAGYYRRFIKNFGIICRPMFDALKKNNFHWQEVQQQ 239


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  600 bits (1548), Expect = e-168
 Identities = 295/625 (47%), Positives = 419/625 (67%), Gaps = 4/625 (0%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F  +K  ++Q PVLA+PDF+  FI+E DA  +G+GAVLMQ G+P+A+ SKA+GPK+  +S
Sbjct: 20   FDAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALS 79

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TY+KE +A+  A+ +WKHY  G S IIRTD  SLK++ EQ+I+   Q K L KLL   ++
Sbjct: 80   TYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYK 139

Query: 362  VQYKKGAENKVADALSRKWE--CLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQQEA 535
            ++YKKG ENK ADALSR  +   L  + ++P W+ +V  SY TD +   + + + +  ++
Sbjct: 140  IEYKKGQENKAADALSRMQQLNALTTTVIVPQWITEVAASYSTDPKCHELESHLHIAPQS 199

Query: 536  N--YSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYWPKL 709
            +  Y+ K G+LR++  I VG    +R++++ + H+S  GGHSG +ATY R+K++FYWP +
Sbjct: 200  HPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGM 259

Query: 710  WEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDVVLV 889
                           +NK EH             E  ++H+TMDF+EGLPKSEGKDV+ V
Sbjct: 260  KLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWV 319

Query: 890  VVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQELFSV 1069
            +VDRFTK++HFI L+HPFTA ++  +F++  YKLHG+P  IVSDRD++FTS  W+E+F  
Sbjct: 320  IVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEK 379

Query: 1070 SGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFHSAI 1249
            +GVKL  SSAYHPQTDGQ+ERVNQC+E YLRC +S +P  W   L  AEWWYNT+FH+++
Sbjct: 380  AGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSL 439

Query: 1250 KMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQYAD 1429
             MSP++AL+G  P    E ++L      G     E +  +   ++ +L  A  RMK +AD
Sbjct: 440  GMSPYQALHGIKPPLLAE-LLLPGSLLEGERNKQEAKAALLETIKSHLVKAQARMKYFAD 498

Query: 1430 TKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSLPAT 1609
              R ER+ EVGD V++K+QPY+ +S+   S+ KL ++Y+GPF+VLE+IGSVAYKL LP T
Sbjct: 499  QHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVT 558

Query: 1610 SKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQWLI 1789
            S+IH VFHVSQLKK +G     ++ LP    EG++L  P+A+LDRRL+ + N+P VQW I
Sbjct: 559  SQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKI 618

Query: 1790 QWSTLTLEDATWEFANEFMKKWPAF 1864
             W+ L    ATWE A    K +P+F
Sbjct: 619  HWANLPESAATWEDAAFITKVFPSF 643


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  598 bits (1543), Expect = e-168
 Identities = 298/630 (47%), Positives = 415/630 (65%), Gaps = 9/630 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F+ LK  +   PVLALPDF + F +E DAC  G+GAVLMQ G+PIAFFSKALGPK+ G S
Sbjct: 845  FETLKHKLRTSPVLALPDFDQAFTIEADACGVGIGAVLMQGGRPIAFFSKALGPKAAGQS 904

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
             YEKE MA+  A+ +W+HY+ G+  II+TD QSLKF++ Q++    Q K L KL+   + 
Sbjct: 905  IYEKEAMAILEALKKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYT 964

Query: 362  VQYKKGAENKVADALSRKWE-------CLAISAVIPAWVEDVIGSYETDSEIQSIIARVT 520
            ++YK G EN VADALSR  +       C  ++ VIP W+ D+  SYE D +   I++ + 
Sbjct: 965  IEYKSGKENLVADALSRLPQKEAVADRCHPMTVVIPEWIVDIQRSYENDVQAHKILSLIG 1024

Query: 521  LQQEANYSYK--DGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVF 694
               + +  YK   G+L+++G IYVG    IR++++   H+S+ GGHSGM+AT+ RIK +F
Sbjct: 1025 TAADPDREYKLEAGLLKYKGRIYVGEATDIRRQLITTYHSSSFGGHSGMRATHHRIKMLF 1084

Query: 695  YWPKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGK 874
            YW  +  +              K EHV            +  + H+TMDFIEGLPKS+GK
Sbjct: 1085 YWHGMRGEVERFIRECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKSQGK 1144

Query: 875  DVVLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQ 1054
            DV+LVVVDR TK++HFI L HP+   +V   FM+ ++KLHGMP  I++DRD++FTS  +Q
Sbjct: 1145 DVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQ 1204

Query: 1055 ELFSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTS 1234
            E+F    VKL+ S+AYHPQ DGQTERVNQC+E YLR  +   PH W+ +L+LAEWWYNT+
Sbjct: 1205 EIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQEPHKWYSWLALAEWWYNTT 1264

Query: 1235 FHSAIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRM 1414
            FH+AI+M+PF+A+YGYSP    E  V  N+        +EE++ I   L+ +L  A +RM
Sbjct: 1265 FHTAIQMTPFKAMYGYSPPQINEFSVPCNISE-EARVTIEEKEAILNKLKNSLADAQHRM 1323

Query: 1415 KQYADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKL 1594
            K +AD  RTER+ EVGD V++KL+PY+QS+   R + KL +K++GPF+VL+KIG +AYKL
Sbjct: 1324 KYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKL 1383

Query: 1595 SLPATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPA 1774
             LP  ++IH VFHVSQLKK +G+      +LP    +GQ+  EP+A+L RR+V ++    
Sbjct: 1384 QLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAV 1443

Query: 1775 VQWLIQWSTLTLEDATWEFANEFMKKWPAF 1864
             QWLI W  L+  +ATWE A+     +P+F
Sbjct: 1444 TQWLILWQNLSPAEATWEDASVIQAMFPSF 1473



 Score =  484 bits (1245), Expect = e-133
 Identities = 271/757 (35%), Positives = 415/757 (54%), Gaps = 11/757 (1%)
 Frame = +1

Query: 2707 GGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEMFVRAL 2886
            G +P +W+ +  ++F++   P    + LA  ++ G A  W            W  +   +
Sbjct: 105  GEDPIDWLKQCEKFFEITGTPLDQWVNLAVAHLNGRALKWFGGIGLPWQVIAWPQWCSMV 164

Query: 2887 FERFAEGTTGESVGEFSKLKQSGS-VGEYMRRFEELKSLFACTHARMPADFYVSLFLSGL 3063
              RF+  +  E++  F  +KQ G+ V +Y+ +FE+   L    H  +   +  S F+ GL
Sbjct: 165  CTRFSAASEHEAIELFQNVKQFGTTVEQYIDKFEDYVDLVKRDHPYLQEQYLTSCFIGGL 224

Query: 3064 KEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAKPKLISQTNVISKGGQELQKTSFTSKL 3243
            + +I+  V   +P  L + +  A  ++              N    GG + +  +   + 
Sbjct: 225  RADIKYDVCGQKPQGLLETYWAANARKMV-----GNFNRNRNQNPLGGNQGRNANHRGQ- 278

Query: 3244 PLKEPIKFKKISNEEMQRRRELGLCFKCGEKYSPQHKCALSEVNMLIVSEWIEEQDN--- 3414
                        N     RRE   C+ C E + P+H+C + +    ++ E   ++D    
Sbjct: 279  ------------NRGEGDRREEKKCWFCKEPWFPRHQCKIKQAIHALLEEDDGQEDKETS 326

Query: 3415 --GGELSLLQXXXXXXXXXXXXXXTDGIQLSLSAISGTINGTTFRIVGRIKGREVIMLID 3588
              GG+    +               + + +S +A+ GT    TF ++ +I GR  + L+D
Sbjct: 327  NTGGDEEEKKETEESATSENESPTEELMYISQTAVQGTSRPDTFSVLIKINGRTAVGLVD 386

Query: 3589 TGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQELEFCQDLYE 3768
            +GST +F+D+    +   P   +    + +  G      V+   +S+ +Q   F      
Sbjct: 387  SGSTTTFMDQDYALRNYYPLKNTDTKKVVVAGGGELKTDVMVPDISYEIQGECFTNQFKL 446

Query: 3769 WKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNSHRTVELKAIEAEHLPK 3948
              L G D+ILG DW+  YSP++ D K++ L   KG K + +Q+  +  +   I  + L K
Sbjct: 447  LPLKGYDIILGADWIYNYSPISLDLKQRILGITKGNKVILLQDFTKPNKHFQISGKRLEK 506

Query: 3949 WLDRAAEVWLGQLCGV-----TVEHEEGKQSSDIQPLLEEFGDVFEKPRGLPPSREHEHS 4113
             L + A   LG +  V     TVE E      DI  ++++F  V ++P+GLPP RE +H 
Sbjct: 507  MLKKGA---LGMVIQVNVMSETVEEEGHVIPEDISDIIQQFPAVLKEPKGLPPKRECDHV 563

Query: 4114 IILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVKKKDGSWR 4293
            I L  GA P  +R YR+PHYQK  +E  ++E+++   IQ          ++V+KKDGSWR
Sbjct: 564  INLQSGAVPPNIRPYRVPHYQKEAMENIINELIESKEIQTSDSPYSSPAVMVRKKDGSWR 623

Query: 4294 FCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESDIPKTAFS 4473
             C+DYRQLNA TVK+KFP+P+++DLLDEL+GA+ FSK+DLRSGY QIRM E D+ KTAF 
Sbjct: 624  MCVDYRQLNAQTVKNKFPMPIIEDLLDELNGARIFSKLDLRSGYHQIRMAEKDVHKTAFR 683

Query: 4474 THFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLSYHLLHLR 4653
            TH GH+E++VMPFGLTN PATFQSLMN V  P+LR+FVLVFFDDILIYS   + HL H++
Sbjct: 684  THLGHYEYQVMPFGLTNDPATFQSLMNHVLAPFLRRFVLVFFDDILIYSKTRAEHLEHVK 743

Query: 4654 IVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSPLTVKQLR 4833
            +V+  L+++ L  K+ KC FG   V YLGH+IS +GV  DPKK+ ++ NWP+P  V  +R
Sbjct: 744  LVMQALQDNHLVIKLKKCAFGLASVSYLGHVISQDGVATDPKKVGKIKNWPTPKDVTDVR 803

Query: 4834 GFLGLTGYYRRFIKSYGIVSKPLTNLLKKNSFQWSTE 4944
             FLG+TGYYRRFI+ YG + +P+ ++LKKN FQW  +
Sbjct: 804  KFLGMTGYYRRFIQGYGTICRPIHDMLKKNGFQWGAD 840


>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score =  584 bits (1506), Expect = e-163
 Identities = 299/628 (47%), Positives = 419/628 (66%), Gaps = 8/628 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F  LK  + + PVLALP+F + F+VETDA   G+GAVLMQ G PIAF SKALGP++ G+S
Sbjct: 2134 FVALKTALIEAPVLALPNFQQPFVVETDASDKGIGAVLMQNGHPIAFLSKALGPRTQGLS 2193

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TYEKE +A+  A+  W+ YL+ + F+IRTDH+SL FL  Q++S   QQK L+KLLGL ++
Sbjct: 2194 TYEKESLAIMLAIDHWRSYLQHDEFVIRTDHRSLSFLTNQRLSTPWQQKALTKLLGLRYK 2253

Query: 362  VQYKKGAENKVADALSRKW-----ECLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQ 526
            + YKKG EN  ADALSR+      E  AIS  +P W++++I  Y++DSE Q ++  +++ 
Sbjct: 2254 ICYKKGLENGAADALSRRQSDGLEEVSAISICLPDWLQELIDGYQSDSEAQKLLQALSVS 2313

Query: 527  QE--ANYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYW 700
                +N+  ++G+L F+  I++G+   ++++I+  +H +  GGHSG+  TY R+K++F W
Sbjct: 2314 GAGPSNFEVQNGILYFKHRIWIGHNKLLQQKILANLHTAAVGGHSGILVTYQRVKQLFSW 2373

Query: 701  PKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDV 880
            P + +D            R K EHV             + +  +TMDFIEGLPKS   D 
Sbjct: 2374 PGMRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEVPSQSWQVITMDFIEGLPKSASFDC 2433

Query: 881  VLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQEL 1060
            +LV+VD+F+KF+HF+ L HPFTA  VA  FM+ ++ +HG+P++IVSDRD+VFTS  W+EL
Sbjct: 2434 ILVIVDKFSKFAHFLPLKHPFTAFGVAQLFMEHIHSIHGLPQAIVSDRDRVFTSSLWKEL 2493

Query: 1061 FSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFH 1240
            F  +G +L++SS+YHPQ+DGQTERVNQCVEM+LRCF    P  W  +L+LA++WYNTSFH
Sbjct: 2494 FRRAGTQLRMSSSYHPQSDGQTERVNQCVEMFLRCFVHSCPSRWKHWLALAQYWYNTSFH 2553

Query: 1241 SAIKMSPFEALYGYSPTTFGEGMVLENVKHVG-VSQMLEERKKIDAILRVNLTAAVNRMK 1417
            SA+ M+PFE L+G+ P  F  G+   +V   G ++  L ER  ++ ++  +L  A  RMK
Sbjct: 2554 SALGMTPFEVLFGHKPRYF--GLSTSSVDAPGDLATWLSERNDMNTLIHHHLLRAQQRMK 2611

Query: 1418 QYADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLS 1597
              AD KR+ER F VGDWVF+KLQPY Q S   RS +KLS KY+GPFQVL++IGSVAY+L 
Sbjct: 2612 SQADLKRSERCFVVGDWVFMKLQPYIQQSFMTRSNRKLSFKYYGPFQVLQRIGSVAYRLQ 2671

Query: 1598 LPATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAV 1777
            LPA S IH V HVSQLKK +     VQ  LP  + +   L  P+ ILD   +++ +K   
Sbjct: 2672 LPAHSLIHPVVHVSQLKKALAPSEAVQPSLPVLNPDAGHLAIPIKILDHCSIRRGSKMIK 2731

Query: 1778 QWLIQWSTLTLEDATWEFANEFMKKWPA 1861
            Q LI+WS ++    TWE  +E   K+PA
Sbjct: 2732 QVLIRWSGVSSSADTWESLDEMQAKFPA 2759



 Score =  196 bits (497), Expect = 1e-46
 Identities = 147/518 (28%), Positives = 240/518 (46%), Gaps = 9/518 (1%)
 Frame = +1

Query: 2692 FSTICGGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEM 2871
            F    G +P+ W L+   YF ++     + + +A +Y  G A  W +S  A     +W +
Sbjct: 1563 FPQFDGSDPQNWRLRCEHYFGVYGTHPDLWVRVATIYFIGRAASWLRSSRAHLLCGNWGV 1622

Query: 2872 FVRALFERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELKSLFACTHARMPADFYVSLF 3051
            F   +  +F      + V +  +LKQ GSV EY  RF++L S        +     V+ F
Sbjct: 1623 FCDTVDRKFDRNRHLQLVRQIDQLKQLGSVNEYYERFDDLWSQLLVYDPTLST---VNFF 1679

Query: 3052 LSGLKEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAKPKLISQTNVISKGGQELQKTSF 3231
                            P+ + K  +   D    +K A P  +     +  G  + ++T+ 
Sbjct: 1680 ----------------PSLVSKDGKKLGDHAARIKSAYPLPLPPPKFVHAGKGDDKRTAE 1723

Query: 3232 TSKLPLKEPIKFKKISNEEMQRRRELGLCFKCGEKYSPQHKC-------ALSEVNMLIVS 3390
              K+         K+   +  RR + GLC+ C EK+SP HKC       A+ E+  ++ +
Sbjct: 1724 VPKVANSSD----KLVALKAYRRAQ-GLCYVCAEKWSPTHKCSGSVQLHAVQELFSVLAA 1778

Query: 3391 EWIE-EQDNGGELSLLQXXXXXXXXXXXXXXTDGIQLSLSAISGTINGTTFRIVGRIKGR 3567
            +  E EQD     SL+                    +SL AI GT++  T R+ G I+G 
Sbjct: 1779 DVSEGEQDADSTSSLMA-------------------ISLQAIQGTVSAHTLRLQGSIQGF 1819

Query: 3568 EVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQELE 3747
            +V++L+D+GS+ SF+   V+  L   +S   P+ + + NG     +       W +Q  +
Sbjct: 1820 DVLILVDSGSSCSFLSSVVLPHLTGVKSLLTPVQVKVANGAVLSCTSELPAAKWEVQGHQ 1879

Query: 3748 FCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNSHRTVELKAI 3927
            F  D     L   DMILG DWL++YSP+  +++ + + F    K V ++     ++   +
Sbjct: 1880 FSTDFKLLPLDNYDMILGMDWLEKYSPMDINWQAKTIQFGLHDKSVELKGVVPELDKCDL 1939

Query: 3928 EAEHLPKWL-DRAAEVWLGQLCGVTVEHEEGKQSSDIQPLLEEFGDVFEKPRGLPPSREH 4104
             + H  + L ++ A   L QL             S IQ +L+EF D+F +P GLPPSR +
Sbjct: 1940 VSIHQLQLLHNQGAVESLVQLTASDGSSSSQNVPSSIQSILDEFADIFNEPDGLPPSRSY 1999

Query: 4105 EHSIILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQE 4218
            +H+I L+ GA+P  +R YR    QK EIEKQV EML++
Sbjct: 2000 DHTIPLIAGAQPVNIRPYRYTPDQKNEIEKQVQEMLKK 2037



 Score =  120 bits (300), Expect = 8e-24
 Identities = 61/95 (64%), Positives = 68/95 (71%)
 Frame = +1

Query: 4402 KIDLRSGYFQIRMKESDIPKTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRK 4581
            K DLRSGY QIRM   D  KTAF TH GHFEF+V+PFGLT+APATFQ +MN V    LR+
Sbjct: 2036 KKDLRSGYHQIRMAPQDEHKTAFKTHNGHFEFRVLPFGLTSAPATFQGVMNSVLAAQLRQ 2095

Query: 4582 FVLVFFDDILIYSTDLSYHLLHLRIVLTVLREHQL 4686
             VLVF DDIL+YS  L  H  HLR VL+ L  HQL
Sbjct: 2096 SVLVFVDDILVYSRSLEEHKNHLRQVLSTLTHHQL 2130


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  584 bits (1505), Expect = e-163
 Identities = 319/759 (42%), Positives = 449/759 (59%), Gaps = 5/759 (0%)
 Frame = +1

Query: 2692 FSTICGGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEM 2871
            F    G +P  WV + +Q+F  HQ     ++ LA  +M+G+A +W Q   A  G   WE 
Sbjct: 93   FPKFNGEDPNGWVYRADQFFNYHQTNPHHRVLLASFHMEGKALVWFQDIEAAGGISSWEG 152

Query: 2872 FVRALFERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELKSLFACTHARMPADFYVSLF 3051
            FVRAL  RF      + +    +LKQ+ +V +Y  +FE L +        +   + +S F
Sbjct: 153  FVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLR----GLAESYKLSCF 208

Query: 3052 LSGLKEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAK--PKLISQTNVISKGGQELQKT 3225
            LSGL+E IR  V+M  P++L  AF LA  QE+ +   +   KL S    ++ G       
Sbjct: 209  LSGLRENIRFMVRMLNPSNLHIAFGLAKMQEENVAALRRTAKLGSVPTRLAIGPP----- 263

Query: 3226 SFTSKLPLKEPIKFKKISNEEMQRRRELGLCFKCGEKYSPQHKCALSEVNMLIVSEWIEE 3405
               S    +  +  +++S  +M+ RR+ GLC+ C +K++P HKC  +    L + E  E 
Sbjct: 264  ---SPPEKRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSAR---LFIMECDES 317

Query: 3406 QDNGGELSLLQXXXXXXXXXXXXXXTDGIQLSLSAISGTINGTTFRIVGRIKGREVIMLI 3585
             D+    S +                    +S+ A+ G+ N  T R +G I GR V++L+
Sbjct: 318  SDDEVPKSEVAEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAVVILV 377

Query: 3586 DTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQELEFCQDLY 3765
            DTGSTH+F+D  V+++  LP + ++ L + + NG+   +   C  V  +MQ   +  D Y
Sbjct: 378  DTGSTHNFMDPSVIQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAVPLHMQGNLYTIDFY 437

Query: 3766 EWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNSHRTVELKAIEAEHLP 3945
               LGG D++LG  WLQ   P+ +D+ + ++ F    K   +Q    T  +  +E E   
Sbjct: 438  ILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFSVWDKPRKLQGMSPT-GISLVEGEKFG 496

Query: 3946 KWL---DRAAEVWLGQLCGVTVEHEEGKQSSDIQPLLEEFGDVFEKPRGLPPSREHEHSI 4116
            K      R   + L      ++   E      I  LL  + +VF +P+GLPP+R H+H I
Sbjct: 497  KVSRQNKRGLVIQLIDFENSSLLSIETSAEPLIYDLLNLYPEVFSEPKGLPPTRNHDHHI 556

Query: 4117 ILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVKKKDGSWRF 4296
            +L  GAKP  +  YR P++QK+EIE  V EMLQ G+++         ++LV+K DGSWR 
Sbjct: 557  VLHSGAKPVCVGPYRYPYFQKSEIENIVHEMLQSGIVRPGQSPFSSPVLLVRKHDGSWRL 616

Query: 4297 CIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESDIPKTAFST 4476
            C+DYR LN  T+K KFPIP+VD+LLDELHG+  FSK+DLRSGY QIR+   DIPKTAF T
Sbjct: 617  CVDYRALNKETIKVKFPIPIVDELLDELHGSTIFSKLDLRSGYHQIRVHPEDIPKTAFRT 676

Query: 4477 HFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLSYHLLHLRI 4656
            H GH+EF V+PFGLTNAP TFQSLMN +F PYLRKF+LVFF DIL+YS  L+ H+ HL+ 
Sbjct: 677  HEGHYEFLVIPFGLTNAPTTFQSLMNDIFKPYLRKFILVFFYDILVYSKSLADHVHHLQT 736

Query: 4657 VLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSPLTVKQLRG 4836
            VL +L++HQLF K SKC FG  E+EYLGHLIS +GV+ADP KIE M NWP P ++K LRG
Sbjct: 737  VLDILKQHQLFAKKSKCCFGCSEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRG 796

Query: 4837 FLGLTGYYRRFIKSYGIVSKPLTNLLKKNSFQWSTEAEQ 4953
            FLGLTGYYR+FIK YG+++ PLT LLKKNSF+W+  A++
Sbjct: 797  FLGLTGYYRKFIKGYGLIAAPLTALLKKNSFKWTESAKR 835



 Score =  568 bits (1465), Expect = e-159
 Identities = 295/632 (46%), Positives = 411/632 (65%), Gaps = 13/632 (2%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            FQ+LK  ++ PPVLALPDF+  F ++ DA   G+GAVLMQ+G+P+A+ S+A+  K+L +S
Sbjct: 837  FQDLKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAIHGKALQLS 896

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TYEKELMAL  AV +W+ YL G++F I+TD  SLK+L+EQK+    QQKW++KLLG  F 
Sbjct: 897  TYEKELMALVLAVKKWRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFV 956

Query: 362  VQYKKGAENKVADALSRKWE------CLAISAVIPAWVEDVIGSYETDSEIQSIIARVTL 523
            V+YK+G ENKVADALSRK E        AI+A    W+E +   Y  D ++Q II  +  
Sbjct: 957  VEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTXYAIDPKLQQIIKNLEQ 1016

Query: 524  QQEA--NYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFY 697
               A  NY  +DG+L ++G +Y+  +  +R++I+  +H+S  GGHSG   T  R K  FY
Sbjct: 1017 GSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHSSPQGGHSGFHKTLHRAKSEFY 1076

Query: 698  WPKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKD 877
            W  + ++            +NK E++             K +  +++DFIEGLP SE   
Sbjct: 1077 WEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGLPNSESYS 1136

Query: 878  VVLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQE 1057
            V++VVVDR +K++HFI ++HP+TA K+A  F+  ++KLHG+P SIV+DRD  FTS FW+E
Sbjct: 1137 VIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTFTSTFWKE 1196

Query: 1058 LFSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSF 1237
            LF + G  LK SSAYHPQTDGQTE VN+ VE YLRCFS  +P  W K+L LAEWWYNT+ 
Sbjct: 1197 LFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAEWWYNTNI 1256

Query: 1238 HSAIKMSPFEALYGYSPT-----TFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAA 1402
            H++ K+SPFE++YGY P      T G   + E      V   L+ R +I  ILR NL  A
Sbjct: 1257 HASTKLSPFESVYGYPPPKLIPYTPGTTQLQE------VENTLKTRDEIIRILRTNLQLA 1310

Query: 1403 VNRMKQYADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSV 1582
             +RMK++AD K T RSF +GD V+++LQPYKQ SV  R   KLS +++GP++VLEKIG+V
Sbjct: 1311 QDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTV 1370

Query: 1583 AYKLSLPATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQR 1762
            AY+L LP  +KIH VFHVS LK+K+GE   +   LP    +G +  EP  IL RRL K++
Sbjct: 1371 AYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRLKKKK 1430

Query: 1763 NKPAVQWLIQWSTLTLEDATWEFANEFMKKWP 1858
            N    + L++W  L  ++A+W   +  + ++P
Sbjct: 1431 NHAVTEVLVKWKGLGEDEASWVEYSTLVNEFP 1462


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  579 bits (1492), Expect = e-162
 Identities = 279/624 (44%), Positives = 406/624 (65%), Gaps = 3/624 (0%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F  LK  M+  PVLALPDF++ F +ETDA   G+G VLMQ G+P+A+FS+ LG ++  MS
Sbjct: 712  FVKLKLAMTTAPVLALPDFSENFTLETDASGTGIGGVLMQRGRPLAYFSRTLGVRAAAMS 771

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TY++E +A+  ++  W+HY  G   IIRTD QSLKF+ +QK++   Q K + +LL   + 
Sbjct: 772  TYDREALAIIESLKRWRHYFLGTQLIIRTDQQSLKFMTDQKVAEGIQHKLMLRLLEFDYT 831

Query: 362  VQYKKGAENKVADALSRKWEC-LAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQQEAN 538
            ++YKKG ENKVADALSR+    +AIS  +P+W+E V  SY+ D+  + ++ ++TL   A+
Sbjct: 832  IEYKKGKENKVADALSRRGNSVMAISIAVPSWIEAVTNSYQNDANCKELMEQLTLAPNAD 891

Query: 539  --YSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYWPKLW 712
              Y+   GVLR++G IYVG    +R  I+ ++H S  GGHSG  ATY R+K +FYWP + 
Sbjct: 892  SGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMK 951

Query: 713  EDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDVVLVV 892
            ++            R+K EH             +  + H++MDFIEGLP S+GK+V+ VV
Sbjct: 952  KEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVV 1011

Query: 893  VDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQELFSVS 1072
            VDRFTK++H + L+HP++   VA  F+D ++KLHG P +IVSDRD++FTS  WQELF   
Sbjct: 1012 VDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSM 1071

Query: 1073 GVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFHSAIK 1252
             V+L+ S+AYHPQTDGQTERVNQCVE YLRC +   P  W  +L LAEWWYNT+FH+A+K
Sbjct: 1072 KVQLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALK 1131

Query: 1253 MSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQYADT 1432
            +SPF+ALYG+ P    E + +   +       LEE++ +   L+ NL  A  RMK+YAD 
Sbjct: 1132 LSPFQALYGFPPPLINE-VAIPGPEDNEARDFLEEKQVMLRRLKENLAQAQTRMKKYADL 1190

Query: 1433 KRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSLPATS 1612
             R+ER   VGD V++K+QPY+ ++   +   KL++ ++GPF+V++++G VAY+L LP   
Sbjct: 1191 NRSERQLTVGDMVYLKMQPYRTTAFGLKQALKLTSIFYGPFRVMQRVGKVAYRLQLPEGV 1250

Query: 1613 KIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQWLIQ 1792
             IH VFH+SQLK+  G ++    +LP    +G++  EP  + + R + + +    QWL+Q
Sbjct: 1251 GIHPVFHISQLKQHCGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQ 1310

Query: 1793 WSTLTLEDATWEFANEFMKKWPAF 1864
            W+ L  EDA+WE A+     +P F
Sbjct: 1311 WANLPPEDASWEDASFIKSTFPEF 1334



 Score =  478 bits (1229), Expect = e-131
 Identities = 258/678 (38%), Positives = 389/678 (57%), Gaps = 12/678 (1%)
 Frame = +1

Query: 2956 SVGEYMRRFEELKSLFACTHARMPADFYVSLFLSGLKEEIRGPVQMFQPASLEKAFRLAM 3135
            S+ +Y+ RFEEL + +   +   P  F+V  F++GL+++I+  ++  +P  L +A+ +A 
Sbjct: 44   SISDYIDRFEELMAAYKGENPMQPEAFFVKCFINGLRQDIKHYLKPLKPQVLCEAYWMAK 103

Query: 3136 DQEKCLKPAKPKLISQTNVISKGGQELQKTSFTSKLPLKEPIKFKKISNEEMQRRREL-- 3309
            D EK       + +S + V        QK  + + L        +    +E+  +     
Sbjct: 104  DMEKGAGAVARRGMSSSVV------NTQKGGYNANLAKNRVQSVQNFQKKEVGNKPNTPF 157

Query: 3310 --GLCFKCGEKYSPQHKCALSEVNMLIVSEW-------IEEQDNGGELSLLQXXXXXXXX 3462
              G+C  CG+K+   H+C   +   L+VSE        +E +D+  + +           
Sbjct: 158  IPGICRYCGDKWFLGHRCKQYQQVNLMVSETEETAHPNVETEDDPPDTNECTVEETDPPE 217

Query: 3463 XXXXXXTDGIQLSLSAISGTINGTTFRIVGRIKGREVIMLIDTGSTHSFIDERVVKQLKL 3642
                     +Q+S  A+ G    TT+ +  +I GR  I L+D+GSTH+F+D R   +   
Sbjct: 218  QLMH-----MQVSSQAVQGYSRFTTYTVEVKIGGRRGIALLDSGSTHTFMDLRFATKTTC 272

Query: 3643 PRSQSQPLLITLTNGETRWNSVVCRGVSWNMQELEFCQDLYEWKLGGSDMILGTDWLQQY 3822
                +  + +T+  G +         V +++    FC      KL   DM+LG DW+ Q+
Sbjct: 273  RIMCNNLMKVTVAGGGSILTGSHVPEVKYSINGQVFCNSFKILKLKNYDMVLGCDWMYQH 332

Query: 3823 SPVTFDYKKQELSFMKGGKGVSIQNSHRTVEL-KAIEAEHLPKWLDRAAEVWLGQLCGVT 3999
            SP+  D K + L+ MK GK   I +     E  + +E+  L K   +    ++ +L  + 
Sbjct: 333  SPINIDLKTRRLTIMKDGKLAMILDDQSVSETARLLESNELEKLTGKGIMGYVIELQSLK 392

Query: 4000 VEHEEGKQSSDIQPLLEEFGDVFEKPRGLPPSREHEHSIILVEGAKPFKLRSYRLPHYQK 4179
             E      ++  Q L++ + D+F++P  LPP R  +HSI + + + P  +R YR+PH QK
Sbjct: 393  GEERNNTVNTLYQNLIQTYMDIFKEPTDLPPERGCDHSIPIKDNSVPPNIRPYRVPHRQK 452

Query: 4180 TEIEKQVSEMLQEGVIQXXXXXXXXXIILVKKKDGSWRFCIDYRQLNALTVKDKFPIPMV 4359
             E+E+Q+  +L+  +I+          ILVKKKDGSWR CIDYR+LNA T+K+K+PIP++
Sbjct: 453  NEMEQQIQNLLESSIIRPSTSPYASPAILVKKKDGSWRLCIDYRELNAQTIKNKYPIPVI 512

Query: 4360 DDLLDELHGAQFFSKIDLRSGYFQIRMKESDIPKTAFSTHFGHFEFKVMPFGLTNAPATF 4539
            +DLLDEL GA+ FSK+DLRSGY QIRM   DI KTAF+T+ GH+E+ VMPFGLTNAPATF
Sbjct: 513  EDLLDELFGAKVFSKLDLRSGYHQIRMNREDICKTAFNTYLGHYEYLVMPFGLTNAPATF 572

Query: 4540 QSLMNKVFGPYLRKFVLVFFDDILIYSTDLSYHLLHLRIVLTVLREHQLFGKMSKCIFGQ 4719
            Q LMN +F  YLR+F+LVFFDDILIYS +   H  HL IVL +LR+HQLF K++KC+F  
Sbjct: 573  QCLMNSIFAQYLRRFILVFFDDILIYSKNDEEHQEHLTIVLGLLRQHQLFAKLNKCVFAV 632

Query: 4720 HEVEYLGHLISGEGVRADPKKIEEMTNWPSPLTVKQLRGFLGLTGYYRRFIKSYGIVSKP 4899
             +V YLGH+ISG+GV  DP KI  +  WP P  + QLR FLG+TGYYRRFI+ YG++ +P
Sbjct: 633  SQVTYLGHVISGDGVATDPDKISTIVEWPKPQDLTQLRSFLGMTGYYRRFIRHYGVICRP 692

Query: 4900 LTNLLKKNSFQWSTEAEQ 4953
            L ++L+K  F W    ++
Sbjct: 693  LYDMLRKGGFDWKDPQDE 710


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score =  576 bits (1485), Expect = e-161
 Identities = 311/766 (40%), Positives = 447/766 (58%), Gaps = 4/766 (0%)
 Frame = +1

Query: 2665 IGVETTEGGFSTICGGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIA 2844
            I + T    F    G N  EWV K NQ+F L+Q P++ ++++A L+ +G+  +W Q+   
Sbjct: 15   INLRTIRLDFPKFYGENVVEWVYKANQFFSLYQTPETQRIKIANLHFEGQPLVWYQNLEK 74

Query: 2845 EHGTHDWEMFVRALFERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELKSLFACTHARM 3024
                  W+     + +RF E      + +  KLKQ  SV EY   FE + +        +
Sbjct: 75   SDLISSWDNLCDQMTKRFGENLNENPLDQLIKLKQRNSVKEYKSDFEIISNRVK----DL 130

Query: 3025 PADFYVSLFLSGLKEEIRGPVQMFQPASLEKAFRLAMDQEKCLK-PAKPKLISQTNVISK 3201
              +  ++ F+ GLKEEI   V+M  P S+E AF +A  QE+ L    KP   +  +    
Sbjct: 131  SEEHKLTYFICGLKEEIGLTVKMLFPKSIETAFSIAKYQEEKLHLEKKPNFRTFQSQAPN 190

Query: 3202 GGQELQKTSFTSKLPLKEPIKFKKISNEEMQRRRELGLCFKCGEKYSPQHKCALSEVNML 3381
                  KT+ T+ +    PIK  +++ +E+  RR+  LC+ C EK+   H C   ++ +L
Sbjct: 191  NQATFSKTNNTTAITKLPPIK--RLTQDELTDRRQKNLCYNCDEKWFRGHVCVKPKIFLL 248

Query: 3382 IVSEWIEEQDNGGELSLLQXXXXXXXXXXXXXXTDGIQLSLSAISGTINGTTFRIVGRIK 3561
               E  E + N   +  +                +  +++L AI+G  N T+ R VG++K
Sbjct: 249  QNVEEFENEINEESVEEIDENIVG----------ENAEITLQAITGVTNSTSIRFVGKLK 298

Query: 3562 GREVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQE 3741
            G++V +L+D+GSTH+FID + V  LKL   QS  + + + NG+   +S  C  V   +QE
Sbjct: 299  GQKVSILVDSGSTHNFIDPKWVPLLKLSNVQSDIMEVKIANGDKIKSSGTCEKVKLLIQE 358

Query: 3742 LEFCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQ---NSHRTV 3912
             +F  D     L G D++LG  WL Q   +  D+K   ++F  G K V ++   N  +  
Sbjct: 359  NQFEVDFLLLPLVGYDLVLGVHWLSQLGVINCDFKNLTMTFTHGNKKVCLKGLNNDTKIA 418

Query: 3913 ELKAIEAEHLPKWLDRAAEVWLGQLCGVTVEHEEGKQSSDIQPLLEEFGDVFEKPRGLPP 4092
            E++ +E + + +      + ++ QL    V+++   + S I PLL  F +VF +P+GLPP
Sbjct: 419  EIQFLEGKMVKE------QGFILQLYSTNVQNDSSLEDSKISPLLRGFPEVFSEPKGLPP 472

Query: 4093 SREHEHSIILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVK 4272
             REH H I L++G  P  +R YR P++QK EIEK V E+++ G I+         +ILVK
Sbjct: 473  EREHVHKIELIQGTNPISVRPYRYPYFQKNEIEKIVKELIESGFIRPSQSPFSSPVILVK 532

Query: 4273 KKDGSWRFCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESD 4452
            K DGSWR C+DYR LN +T+KDKFPIP+VD+LLDEL+GA+ FSK+DLRSGY QI+M  +D
Sbjct: 533  KSDGSWRMCVDYRALNKVTIKDKFPIPVVDELLDELNGAKLFSKLDLRSGYHQIKMHAND 592

Query: 4453 IPKTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLS 4632
            + KTAF TH G +EF VMP  LTNAPATFQS MN VF P+L    L FFDDIL+YS    
Sbjct: 593  VSKTAFRTHEGQYEFLVMPLVLTNAPATFQSAMNSVFKPFLENLCLFFFDDILVYSKTND 652

Query: 4633 YHLLHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSP 4812
             H+ HL  VL  + EH+ F K SKC F Q E++YLGHLIS +GV+ADP KI+ M  WP P
Sbjct: 653  EHICHLEAVLKKMSEHKFFAKSSKCKFFQKEIDYLGHLISDQGVKADPNKIKAMLEWPVP 712

Query: 4813 LTVKQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKNSFQWSTEAE 4950
              +K LRGFLGLTGYYRRFI++YG +++ LT LLKK++F WS EAE
Sbjct: 713  KNLKGLRGFLGLTGYYRRFIRNYGGIARALTELLKKDAFLWSREAE 758



 Score =  518 bits (1334), Expect = e-143
 Identities = 266/588 (45%), Positives = 381/588 (64%), Gaps = 6/588 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F NLK+ ++ PPVLALPDF K F +E DA   G+GAVL QE +PIAFFSKAL  + L +S
Sbjct: 761  FNNLKKAVTSPPVLALPDFNKTFTIECDASGQGVGAVLQQEKRPIAFFSKALKGRLLTLS 820

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TYEKEL AL  A+ +W+ Y+    FI+ TDHQSLK+L+EQKIS  +QQKWLSKLLG +F+
Sbjct: 821  TYEKELYALVQAIQKWRPYICCQEFIVNTDHQSLKYLLEQKISTPSQQKWLSKLLGYNFK 880

Query: 362  VQYKKGAENKVADALSRKWECLAISAVI--PAWV--EDVIGSYETDSEIQSIIARVTLQQ 529
            + YK+GA NK ADALSR  E   +S V+  P W   ++++  YE D ++  I  ++  + 
Sbjct: 881  IYYKQGALNKAADALSRVNEGQLMSVVVSTPIWEIKKEIMDCYEKDQKVAEISFQIANEV 940

Query: 530  EA--NYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYWP 703
             A  N+ + +G+L ++  +YV N   ++ +    +H     GH+G Q + L   K  YW 
Sbjct: 941  LAATNFKWINGLLFYKERLYVPNNNDLKIKTYAILHEDPDNGHTGFQKSLLLAYKEVYWQ 1000

Query: 704  KLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDVV 883
             L +D              K                E+ ++ ++MDFI GLP S+  + +
Sbjct: 1001 GLKKDLKKFVDSCVVCQTCKYGKTNAYGLLQPLPMPEQTWSEISMDFINGLPTSKNYNCI 1060

Query: 884  LVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQELF 1063
             VVVDR TK++HFI L HPF A ++A+EF+  ++KLHG+P+ I+SDRD +FTS FW+ELF
Sbjct: 1061 WVVVDRLTKYAHFIPLKHPFGAKELANEFLQNIFKLHGLPKKIISDRDTIFTSDFWKELF 1120

Query: 1064 SVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFHS 1243
             + G KL LS+A+HPQTDGQTE VN+ +E YLRC++S  P  W K++ LAE+WYN++ H+
Sbjct: 1121 HLLGTKLLLSTAFHPQTDGQTEIVNKSLETYLRCYTSQYPKNWAKWIYLAEFWYNSTTHT 1180

Query: 1244 AIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQY 1423
            +IKM PF+ALYGY P      ++ +  K   + ++L+ +++I   L+ N   A NRMKQ 
Sbjct: 1181 SIKMPPFKALYGYEPPKLSHYLLSKEHK-ADIQELLQTKEEIMQALKTNYLEAQNRMKQN 1239

Query: 1424 ADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSLP 1603
            AD  R ++ ++VGD+V++KLQPY+Q SV  R  QKL+ ++FGP+++ EK+G+VAYKL LP
Sbjct: 1240 ADLNRVDKCYKVGDYVYLKLQPYRQQSVIRRRNQKLAPRFFGPYKITEKVGAVAYKLELP 1299

Query: 1604 ATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRR 1747
             TS IH VFH+SQLK  + +++ V   LP +   G+L   PV IL  R
Sbjct: 1300 PTSGIHPVFHISQLKLSIKDESRVLPQLPLSDLNGRLKPIPVKILQIR 1347


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  567 bits (1460), Expect = e-158
 Identities = 288/625 (46%), Positives = 405/625 (64%), Gaps = 6/625 (0%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            FQ LKQ +   PVLALPDF+K F +ETDA   G+GAVL QE  PIA+ S+ALGPK+ G+S
Sbjct: 913  FQQLKQALVAAPVLALPDFSKHFTIETDASDVGIGAVLSQEKHPIAYLSRALGPKTRGLS 972

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TYEKE MA+  AV  W+ YL+   FII TDH SL  L EQ++    QQK  +KLLGL ++
Sbjct: 973  TYEKEYMAIILAVEHWRPYLQQGEFIILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQYK 1032

Query: 362  VQYKKGAENKVADALSRKW----ECLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQQ 529
            + Y+KG  N  ADALSR+     E  AIS  IP+W+++++  Y+ D + + ++A + +  
Sbjct: 1033 ICYRKGVSNAAADALSRRESPISEVAAISECIPSWMQELMQGYQLDGQSKQLLAELAISP 1092

Query: 530  EANYSYK--DGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYWP 703
             +   Y+   G+L+++G I+VGN   ++ ++++ +H +  GGHSG   TY ++K +F WP
Sbjct: 1093 NSRKDYQLCQGILKYKGKIWVGNNTALQHKLVNELHATPLGGHSGFPVTYRKVKSLFAWP 1152

Query: 704  KLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDVV 883
             + +             + K +                 +  +++DFIEGLP+S   + +
Sbjct: 1153 GMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVPAGAWQTISLDFIEGLPRSSHYNCI 1212

Query: 884  LVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQELF 1063
            LVVVD+F+K+SHFI L+HPF A  VA EFM  +YKLHG+P +I+SDRDK+FTS FW +LF
Sbjct: 1213 LVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRAIISDRDKIFTSQFWDQLF 1272

Query: 1064 SVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFHS 1243
            S  G  L +SSAYHPQ+DGQTERVNQC+E+YLRCF    PH W  +L LAE+WYNTSFHS
Sbjct: 1273 SKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAPHKWSSWLYLAEFWYNTSFHS 1332

Query: 1244 AIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQY 1423
             +  +PFE LYGY+P+ FG G  L++ +   + +   ERK +  +L+ +L  A  +MK  
Sbjct: 1333 TLNKTPFEVLYGYTPSHFGIG--LDDCQIADLHEWHTERKFMQQLLQQHLNRAQQQMKHQ 1390

Query: 1424 ADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSLP 1603
            AD KR+ R F VGDWV++KLQPY Q+ V  R+  KL+ +Y+GPFQV+ ++G+VAY + LP
Sbjct: 1391 ADKKRSFRQFAVGDWVYLKLQPYVQTFVAQRACHKLAFRYYGPFQVMSRVGTVAYHIQLP 1450

Query: 1604 ATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQW 1783
            ATS IH VFHVSQLK  VG    VQ +LP  ++ G L V P   LD+RLVK+ N+  +Q 
Sbjct: 1451 ATSSIHPVFHVSQLKAAVGFSKKVQDELP--TSLGALQV-PFQFLDKRLVKKGNRSVLQL 1507

Query: 1784 LIQWSTLTLEDATWEFANEFMKKWP 1858
            L  W   +  ++TWE   +   ++P
Sbjct: 1508 LTHWYHSSPSESTWEDMEDLFARFP 1532



 Score =  514 bits (1323), Expect(2) = e-144
 Identities = 302/765 (39%), Positives = 431/765 (56%), Gaps = 17/765 (2%)
 Frame = +1

Query: 2707 GGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEMFVRAL 2886
            G NP+ W      YF ++ I     +++A L   G A  W QS  ++     W      +
Sbjct: 155  GDNPQLWKSNCEVYFDIYGIHPQNWVKIATLNFCGNAAFWLQSVRSQLAGATWFELCDRV 214

Query: 2887 FERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELK-SLFACTHARMPADFYVSLFLSGL 3063
              RFA       + ++  + Q+ SV +Y+ RF+ +   L A   +  PA ++V+ F+ GL
Sbjct: 215  CGRFARDRKQALIRQWIHITQTSSVADYVDRFDSIMHQLMAYGGSNDPA-YFVTKFVDGL 273

Query: 3064 KEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAKP----KLISQTNVISKGGQELQKTSF 3231
            K+ IR  V + +P  L+ A  +A+ QE+ L+  +     K  + T + +K    L   +F
Sbjct: 274  KDHIRVVVMVQRPQDLDSACTVALLQEEALEGVQSVSNKKNETTTFLKTKPSHNLTSPTF 333

Query: 3232 TSK-LPL-----KEPIKFKKISNEEMQR----RRELGLCFKCGEKYSPQHKCALSEVNML 3381
             ++ +P      K  ++F K  ++++      RR  GLCF CGEK+   HKCA + V + 
Sbjct: 334  QARSIPFTNIEDKRGVEFSKGRDDKVSALRSYRRSKGLCFVCGEKWGRDHKCATT-VQLH 392

Query: 3382 IVSEWIEEQDNGGELSLLQXXXXXXXXXXXXXXTDGIQLSLSAISGTINGTTFRIVGRIK 3561
            +V E I       E +                    + +S  A++GT +  + R+ G ++
Sbjct: 393  VVEELINALKTDPEENCNSEGAPESEEDSL------MAISFQALNGTDSSKSIRLRGWVQ 446

Query: 3562 GREVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQE 3741
              E++ML+D+GSTHSFID ++  QL   +  +Q + + + +G   +        SW  Q 
Sbjct: 447  NTELLMLVDSGSTHSFIDAKLGAQLCGLQKLNQAIKVQVADGSQLFCDSFLPNCSWWSQG 506

Query: 3742 LEFCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNSHRTVELK 3921
              F  D     LG  D ILG DWL+Q+SP+  D+  + ++F   G+ V +Q  H  +   
Sbjct: 507  HSFTSDFRLLPLGSYDAILGMDWLEQFSPMQVDWVHKWIAFQHHGQAVQLQGIHPQLSTC 566

Query: 3922 -AIEAEHLPKWLDRAAEVWLGQLCGVTVEHEEGKQSSDIQPLLEEFGDVFEKPRGLPPSR 4098
              I  + L     + A + L  L  V            +QP+L EF ++F +P  LPP R
Sbjct: 567  FPISNDQLQGMSKKGAVMCLVHL-NVAETLTATTVPEIVQPILNEFQEIFSEPTELPPKR 625

Query: 4099 EHEHSIILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVKKK 4278
              +H I LVEGAKP  LR YR     K EIE+QV+EML+ GVIQ          +LVKKK
Sbjct: 626  NCDHHIPLVEGAKPVNLRPYRYKPALKDEIERQVAEMLRSGVIQPSSSPFSSPALLVKKK 685

Query: 4279 DGSWRFCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESDIP 4458
            DG+WR CIDYRQLN +TVK K+P+P++D+LLDEL G+++FSK+DLR+GY QIRM E D  
Sbjct: 686  DGTWRLCIDYRQLNDVTVKSKYPVPVIDELLDELAGSKWFSKLDLRAGYHQIRMAEGDEY 745

Query: 4459 KTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLSYH 4638
            KTAF TH GH+E+KVM FGLT APATF S MN+   P LRKF LVFFDDILIYS  L  H
Sbjct: 746  KTAFQTHSGHYEYKVMSFGLTGAPATFLSAMNETLSPVLRKFALVFFDDILIYSPTLELH 805

Query: 4639 LLHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSPLT 4818
            L H+R VL +L  HQ   K+SKC F Q E+ YLGH+I   GV  DP KI+++ +WP P T
Sbjct: 806  LQHVRTVLQLLSAHQWKVKLSKCSFAQQEISYLGHVIGAAGVATDPAKIQDVVSWPQPTT 865

Query: 4819 VKQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKN-SFQWSTEAE 4950
            +K+LRGFLGL GYYR+F++ +G++SKPLT LLKK   F+W+ E E
Sbjct: 866  IKKLRGFLGLAGYYRKFVRHFGLISKPLTQLLKKGIPFKWTPEIE 910



 Score = 28.9 bits (63), Expect(2) = e-144
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 2570 EGSRSMGMSSPDAQLGSGVKYGVSDQGGIGGKSGLKLPKVDFPQFVG 2710
            +G R    +SPD Q   G+ +  S   G+GG     +P +  PQF G
Sbjct: 110  KGQRDPEFASPDQQNQDGLTFQ-SGNSGLGGGIAGSIPPMSCPQFNG 155


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1548

 Score =  565 bits (1457), Expect = e-158
 Identities = 300/633 (47%), Positives = 403/633 (63%), Gaps = 14/633 (2%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F +LK  MS  PVL LP+F K F +ETDAC  G+GAVL QEG P+AF+SKALG  +  +S
Sbjct: 896  FDSLKLAMSSTPVLVLPNFAKPFTIETDACSTGIGAVLSQEGHPVAFYSKALGINNQKLS 955

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
             YEKE +A+  A+ +W+ YL    F+IRTDHQSL  L +Q +    Q+K ++KL+GL ++
Sbjct: 956  IYEKEFLAIMMAIDKWRPYLLRGPFVIRTDHQSLCHLDDQLLGSELQRKAMTKLIGLQYK 1015

Query: 362  VQYKKGAENKVADALSRK---WECLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQQE 532
             QYK+GAENK ADALSR    +   AIS   P WV++V+ SY  D++ QS++  + +   
Sbjct: 1016 FQYKRGAENKSADALSRVGHFFSLQAISIAQPVWVQEVVNSYVVDNQAQSLLTELAIMSP 1075

Query: 533  --ANYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYWPK 706
              + +S   G+++ +G I++G    +  +I+ + H+S  GGHSG+ ATY R+KK+F W  
Sbjct: 1076 NASGFSLVHGLIKKKGRIWLGANSALHTKIISSFHDSAIGGHSGVMATYHRVKKLFVWKG 1135

Query: 707  LWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDVVL 886
            L               + K EH                +  ++MDFIEGLP S+G DV+L
Sbjct: 1136 LKHSVEEFIQQCVVCQKAKHEHCSSPGLLQPLPIPTGAWQDISMDFIEGLPLSKGSDVIL 1195

Query: 887  VVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQELFS 1066
            VVVDRFTK++HF+ L HPFTA +VA  ++ KV  L+GMP+SIVSDRDK+FTSHFWQ LF 
Sbjct: 1196 VVVDRFTKYAHFLPLKHPFTAVQVADNYLSKVASLYGMPKSIVSDRDKIFTSHFWQHLFK 1255

Query: 1067 VSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFHSA 1246
               + L L++AYHPQ+DGQTERVNQC+EMYLRC  +  P  W  +L LA++WYNTSFHSA
Sbjct: 1256 RFAIPLNLTTAYHPQSDGQTERVNQCLEMYLRCAVASAPTKWSSWLPLAQYWYNTSFHSA 1315

Query: 1247 IKMSPFEALYGYSPT--------TFGEGMVLENV-KHVGVSQMLEERKKIDAILRVNLTA 1399
            +K SP +ALYG  PT        T       +++    GVS +L+ER+    +L+ +L  
Sbjct: 1316 LKCSPHKALYGTDPTYGLLPAPLTDDAEQTSDDIDDSSGVSALLKERELFSTMLQHHLAR 1375

Query: 1400 AVNRMKQYADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGS 1579
              NRMKQ+AD KRT RSF+VGD V +KLQPY Q SV  R   KL+ KYFGPF++L  +GS
Sbjct: 1376 DQNRMKQFADAKRTARSFQVGDLVLLKLQPYAQRSVIARPFPKLAFKYFGPFEILAVVGS 1435

Query: 1580 VAYKLSLPATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQ 1759
            VAY+L LPA S IH VFHVSQLK  V +   V   LP  +      + P A+L+RRLVK+
Sbjct: 1436 VAYRLKLPADSLIHPVFHVSQLKSFVPDTKPVFAQLPTAAQLDIADLIPSAVLERRLVKK 1495

Query: 1760 RNKPAVQWLIQWSTLTLEDATWEFANEFMKKWP 1858
             N   VQ L+QW +L    ATWE  +    ++P
Sbjct: 1496 GNAAIVQVLVQWGSLPPALATWEDYDVVRTRFP 1528



 Score =  554 bits (1428), Expect = e-154
 Identities = 321/780 (41%), Positives = 440/780 (56%), Gaps = 11/780 (1%)
 Frame = +1

Query: 2647 RRNWRQIGVETTEGGFSTICGGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIW 2826
            RR W      T +  F    G + R W+     YF  +QI +  ++  A L M G+A  W
Sbjct: 144  RRQW------TPKMDFPRFDGTDVRVWLDNCETYFGFYQITEGFQVSAASLNMIGDAANW 197

Query: 2827 GQSFIAEHGTHDWEMFVRALFERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELKSLFA 3006
             Q++  E G H+WE    A+   F        + E   L Q+GSV EY  +F +L     
Sbjct: 198  YQAWKLETGWHNWESLKTAVLNEFEVNLESVKMDELLLLTQTGSVTEYRSKFNQLVYQLR 257

Query: 3007 CTHARMPADFYVSLFLSGLKEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAKPKLISQT 3186
                 +   F +  FL GLK+E+R  VQ  QP S+ +A+ +A+  E        K     
Sbjct: 258  LYDPLLSDTFLIRHFLLGLKDELRSAVQAQQPTSVSQAYLVALAHESAQLGTGTK----- 312

Query: 3187 NVISKGGQELQKTSF--TSKLPLKEPIKFKKISNEEMQRRRELGLCFKCGEKYSPQHKCA 3360
                KG  + +  +   T KL L     +K  + +  + RR  GLCFKCGEKY+P H CA
Sbjct: 313  ----KGHYKKEHVAIRGTDKLKLAPGELWK--AQQLKEYRRAQGLCFKCGEKYAPGHVCA 366

Query: 3361 LSEVNMLIVSEWIEEQDNGGELSLLQXXXXXXXXXXXXXXTDGIQLSLSAISGTINGTTF 3540
              E   L      EE +   +  L                +D I LSL A++GT    T 
Sbjct: 367  KQEGVQLKALHVQEESEVLSDEVL-------DAITALDVSSDSISLSLHAMAGTCPSHTV 419

Query: 3541 RIVGRIKGREVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRG 3720
            ++   ++ + +I+L+D+GSTHSFID  +  +L+L     QP  + + NGET         
Sbjct: 420  QLRALVQNQVIIILVDSGSTHSFIDAGLCHRLQLSTESIQPTSVRVANGETLCCEAKVPQ 479

Query: 3721 VSWNMQELEFCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNS 3900
             +W +Q  EF   +    +GG D++LG DWL Q+SP+T D+  ++L F   G  ++++  
Sbjct: 480  FAWWVQGHEFSFPMRVLPMGGYDLVLGMDWLTQFSPMTCDWAAKQLQFSYNGSVITLKGI 539

Query: 3901 HRTVELKAIE---AEHLPKWLDRAAEVWLGQLCGVTVEHEEGKQSS-----DIQPLLEEF 4056
              + EL+ +    A  + KW  +  ++W        VE  +   +S     +IQ LL+EF
Sbjct: 540  QTSDELRPVSEVSAVQVMKWT-KGNDIW----AMAVVEPSQSVDNSASTFPEIQQLLQEF 594

Query: 4057 GDVFEKPRGLPPSREHEHSIILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXX 4236
              VF+    LPP R  +H I L+  + P   R YR    QK EIE+QVS ML  G+I   
Sbjct: 595  QSVFQDSNTLPPHRVLDHVISLLPNSVPVNARPYRYSPAQKDEIERQVSTMLSAGLISPS 654

Query: 4237 XXXXXXXIILVKKKDGSWRFCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLR 4416
                   ++LVKKKD SWRFC+DYR+LN LT+K+KFP+P+VD+LLDEL G QFFSK+DLR
Sbjct: 655  CSPFASPVLLVKKKDNSWRFCVDYRRLNDLTIKNKFPLPIVDELLDELAGTQFFSKLDLR 714

Query: 4417 SGYFQIRMKESDIPKTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVF 4596
            SGY QIRM+ESD  KTAF TH GHF+F+VMPFGLTNAPATFQ LMN +F PYLRKFVLVF
Sbjct: 715  SGYHQIRMQESDEFKTAFKTHHGHFQFRVMPFGLTNAPATFQCLMNSIFAPYLRKFVLVF 774

Query: 4597 FDDILIYSTDLSYHLLHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADP 4776
             DDIL+YS   + HL HLR VL +L++HQL  K+SKC F   ++EYLGH+IS  GV  D 
Sbjct: 775  MDDILVYSKSWTDHLKHLRCVLQLLQQHQLCAKLSKCSFAAPQLEYLGHIISAAGVATDA 834

Query: 4777 KKIEEMTNWPSPLTVKQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKN-SFQWSTEAEQ 4953
            +K + M  WP P  + +LRGFLGLTGYYR+F+K+YGI++KPLT LLKKN  F W+   ++
Sbjct: 835  EKTKVMLQWPVPTNLTELRGFLGLTGYYRKFVKNYGILAKPLTVLLKKNVKFVWTEHTQK 894


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  561 bits (1446), Expect = e-156
 Identities = 279/625 (44%), Positives = 412/625 (65%), Gaps = 6/625 (0%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F+ LKQ +   PVLALPDF++ F + TDA + G+GAVLMQ G P+AF SKALGPK+ G+S
Sbjct: 915  FEVLKQALVTAPVLALPDFSQPFCIHTDASYYGVGAVLMQSGHPLAFLSKALGPKNQGLS 974

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TYEKE MA+  A+ +W+ YL+   FII TDH+SL  L EQ++    QQK  +KL GL ++
Sbjct: 975  TYEKEYMAIILAIAQWRSYLQLAEFIIYTDHRSLAQLNEQRLHTIWQQKMYTKLAGLQYK 1034

Query: 362  VQYKKGAENKVADALSRKWE----CLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQQ 529
            + Y+KG +N  ADALSRK +    C AIS  +P W+++V+  Y+ D   + ++A++ L  
Sbjct: 1035 IVYRKGVDNGAADALSRKVQEDSHCCAISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNS 1094

Query: 530  --EANYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYWP 703
              +A +S   G++R +  I++G    ++++++ A+H++  GGHSG  ATY ++K++FYWP
Sbjct: 1095 ADKAPFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWP 1154

Query: 704  KLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDVV 883
             +  D            ++K +               + +  +++DFIEGLP+S   + +
Sbjct: 1155 GMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEVPPQAWHTISLDFIEGLPRSAHYNCI 1214

Query: 884  LVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQELF 1063
            LVVVD+F+K+ HF+ L HPFTA KVA  F+D VYKLHG+P +I+SDRD++FTS FWQ+LF
Sbjct: 1215 LVVVDKFSKYGHFLPLLHPFTAAKVARVFLDNVYKLHGLPVNIISDRDRIFTSSFWQQLF 1274

Query: 1064 SVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFHS 1243
             ++G  L +SS+YHPQ+DGQTER+NQC+E +LRC+    P  W  +LS+AE+WYNT+ HS
Sbjct: 1275 QITGTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAEYWYNTTVHS 1334

Query: 1244 AIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQY 1423
             +  +PFE LYG++P  FG  +V   V    +   L+ER+ +  +++++L  A +RMK+ 
Sbjct: 1335 TLGRTPFEVLYGHTPRHFGI-LVDTVVPQPELETWLKERELMTKVIKLHLHRAQDRMKRQ 1393

Query: 1424 ADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSLP 1603
            AD +R+ER F VGDWV++KLQPY QSSV  RS  KLS K+FGPFQ+ +++GSVAY+L+LP
Sbjct: 1394 ADKQRSERVFSVGDWVYLKLQPYIQSSVATRSNHKLSFKFFGPFQITDRLGSVAYRLALP 1453

Query: 1604 ATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQW 1783
            A+S IH +FHVSQLK+ +G D      LP+     Q+   P  IL RR + +  +   Q 
Sbjct: 1454 ASSSIHPIFHVSQLKRVIGRDQRASPQLPQDVGPIQV---PTRILQRRFIDRGGELIAQV 1510

Query: 1784 LIQWSTLTLEDATWEFANEFMKKWP 1858
             + WS +T + ATWE       ++P
Sbjct: 1511 KVVWSGMTEDLATWEDVEALRARFP 1535



 Score =  464 bits (1193), Expect(2) = e-127
 Identities = 277/762 (36%), Positives = 413/762 (54%), Gaps = 11/762 (1%)
 Frame = +1

Query: 2692 FSTICGGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEM 2871
            F    G NP+ W      YF ++ +   M + +A ++  G A  W QS         W  
Sbjct: 177  FPQFDGDNPQLWKTLCENYFDMYDVEPYMWIRVATMHFIGRAASWLQSVGRRVCMLSWSE 236

Query: 2872 FVRALFERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELKSLFACTHARMPADFYVSLF 3051
            F R L +RF        + +   + QSG+V EY+ +F  L    +   A     +Y   F
Sbjct: 237  FCRQLQDRFGREQHESLIRQLFHIHQSGTVAEYVEQFSILVDHLSAYEANADPLYYTMRF 296

Query: 3052 LSGLKEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAKPKLI--SQTNVISKGGQELQ-K 3222
            + GL+++I+  + + +P++L+ A  LA+ QE+     + +    S ++   K G +L   
Sbjct: 297  IDGLRDDIKAVIMVQRPSNLDTACSLALVQEEATTARRWRRSEPSSSHAGPKTGVQLSAS 356

Query: 3223 TSFTSKLPLKEPIKFKKISNEEMQRRRELGLCFKCGEKYSPQHKCA-------LSEVNML 3381
            T +TS     +            + RR  GLC KC EK++P HKCA       + EV  L
Sbjct: 357  TKWTSNKDSTQSASHSDKLESLRRFRRAKGLCDKCAEKWNPGHKCAATAQLHAMEEVWSL 416

Query: 3382 IVSEWIEEQDNGGELSLLQXXXXXXXXXXXXXXTDGIQLSLSAISGTINGTTFRIVGRIK 3561
            +V E + E D    LS  +                 + +S SA +G+    T ++ G I+
Sbjct: 417  LVDEEVPESD----LSPPEPAPEQLF----------VTISKSAWTGSTGRQTLKLNGSIQ 462

Query: 3562 GREVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQE 3741
               +++LID+GS+H+F+++++   L+   S +  L + + NG             W +Q 
Sbjct: 463  NHPLLILIDSGSSHTFLNDQLRPHLQGVTSMASTLQVQVANGAMVTCHYKLLQAQWQIQN 522

Query: 3742 LEFCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNSHRTVELK 3921
              F  D+    L   DM++G DWL+ +SP+  D+ ++ L     G  V +Q +   V   
Sbjct: 523  CSFTSDVSFLPLPYYDMVVGMDWLESFSPMRVDWAQKWLIIPYQGSSVLLQGNTAGVPAD 582

Query: 3922 AIEAEHLPKWLDRAAEVWLGQLCGVTVEHEEGKQSSDIQPLLEEFGDVFEKPRGLPPSRE 4101
             +  E L  +++ A+ V                    IQ LL++F  VF +P+GLPPSR+
Sbjct: 583  TV-IELL--FMESASSV-----------SSSPDSHPAIQALLQQFSSVFAEPQGLPPSRD 628

Query: 4102 HEHSIILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVKKKD 4281
             +H+I LVEGA+P  +R YR P   K +IEKQV EML +GVIQ         ++LVKKKD
Sbjct: 629  CDHAIPLVEGAQPVSVRPYRYPPALKDKIEKQVQEMLHQGVIQKSNSSFASPVLLVKKKD 688

Query: 4282 GSWRFCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESDIPK 4461
             +WRFC+DYR LNALT+K K+P+P+ D L+DEL  +++FSK+DLR+GY QI +K  +  K
Sbjct: 689  MTWRFCVDYRYLNALTLKSKYPVPVFDQLIDELAHSKWFSKLDLRAGYHQILLKPGEEYK 748

Query: 4462 TAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLSYHL 4641
            TAF TH GH+EF+VM FGLT AP TF S MN+   P LRK  LVFFDDILIYS     HL
Sbjct: 749  TAFQTHVGHYEFRVMAFGLTGAPNTFLSAMNETLKPVLRKCALVFFDDILIYSKSFEEHL 808

Query: 4642 LHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSPLTV 4821
            LHL+ VL +L       K+SKC F +    YLGH+IS +GV   P KI+ +++W  P + 
Sbjct: 809  LHLQKVLQLLLSDNWKVKLSKCEFAKTNTAYLGHIISEQGVSTYPSKIQAISSWAVPTSA 868

Query: 4822 KQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKNS-FQWSTE 4944
            K+LR FLGL G+YR+F+K +GI+S+PL +LLKK++ F W+ +
Sbjct: 869  KELRCFLGLAGFYRKFVKHFGIISRPLFDLLKKHTLFVWTVD 910



 Score = 23.1 bits (48), Expect(2) = e-127
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 5/23 (21%)
 Frame = +2

Query: 2657 GGKSGLK-----LPKVDFPQFVG 2710
            GG  G +     LP+V+FPQF G
Sbjct: 160  GGHEGFRCGHGNLPRVNFPQFDG 182


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  561 bits (1445), Expect = e-156
 Identities = 282/626 (45%), Positives = 406/626 (64%), Gaps = 7/626 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            FQ LKQ +    VLA+PDF   F+VETDA   G+GAVLMQ   P+AF S+ALG +  G+S
Sbjct: 953  FQALKQALITALVLAMPDFQTPFVVETDASDKGIGAVLMQNNHPLAFLSRALGLRHPGLS 1012

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TYEKE +A+  AV  W+ YL+ + F IRTDH+SL FL EQ+++   Q K L+KLLGL ++
Sbjct: 1013 TYEKESLAIMLAVDHWRPYLQHDEFFIRTDHRSLAFLTEQRLTTPWQHKALTKLLGLRYK 1072

Query: 362  VQYKKGAENKVADALSR-----KWECLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQ 526
            + +KKG +N  ADALSR     + E  A+S  +P W+ D++  Y +D +  S +  + + 
Sbjct: 1073 IIFKKGIDNSAADALSRYPGSDRVELSALSVAVPEWINDIVAGYSSDPDACSKVQTLCIN 1132

Query: 527  QEA--NYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYW 700
              A  N+S ++GVL FQ  ++VG+   +++RI+  +H +  GGHSG+Q TY R+K++F W
Sbjct: 1133 SGAVPNFSLRNGVLYFQNRLWVGHNVDVQQRILANLHTAAVGGHSGIQVTYQRVKQLFAW 1192

Query: 701  PKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDV 880
            P+L               + K EHV            +  +  +++DF+EGLPKS   + 
Sbjct: 1193 PRLRATVVQYVQACSVCQQAKSEHVKYPGMLQPLPVPDHAWQIVSLDFVEGLPKSASFNC 1252

Query: 881  VLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQEL 1060
            +LVVVD+F+K+SHF+ LTHPF+A  VA  +M  +++LHG+P+S++SDRD++FTS  W  L
Sbjct: 1253 ILVVVDKFSKYSHFVPLTHPFSALDVAEAYMQHIHRLHGLPQSLISDRDRIFTSTLWTTL 1312

Query: 1061 FSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFH 1240
            F ++G +L++SS+YHPQTDGQTERVNQC+E +LRCF    P  W ++L+LAE+WYNTSFH
Sbjct: 1313 FRLAGTQLRMSSSYHPQTDGQTERVNQCLETFLRCFVHACPSQWSRWLALAEYWYNTSFH 1372

Query: 1241 SAIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQ 1420
            SA+  +PFE LYG+ P  FG        +   + + L ER+K+ A++R +L  A  RMKQ
Sbjct: 1373 SALGTTPFEVLYGHKPRYFGLS-ASAACRSDDLVEWLHEREKMQALIRDHLLRAQTRMKQ 1431

Query: 1421 YADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSL 1600
             AD  R+ERSF VGDWV++KLQP+ Q SV  R+ +KLS +++GPFQVL+K+G+VAY+L L
Sbjct: 1432 QADQHRSERSFAVGDWVYLKLQPFVQQSVVTRANRKLSFRFYGPFQVLDKVGTVAYRLDL 1491

Query: 1601 PATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQ 1780
            P++S IH V HVSQLKK +     V   LP         V P  ILDRR +++ +K   Q
Sbjct: 1492 PSSSLIHPVVHVSQLKKALAPTEQVHSPLPVLDPTNATHVCPAQILDRRFIRKGSKLVEQ 1551

Query: 1781 WLIQWSTLTLEDATWEFANEFMKKWP 1858
              ++W+       TWE   E  +++P
Sbjct: 1552 IQVRWTGDAPAATTWENPQELRRRFP 1577



 Score =  522 bits (1344), Expect = e-145
 Identities = 303/781 (38%), Positives = 432/781 (55%), Gaps = 28/781 (3%)
 Frame = +1

Query: 2692 FSTICGGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEM 2871
            F    G +P++W +K   YF ++     + + +A +Y  G A  W +S  A     +WE 
Sbjct: 181  FPKFDGTDPQDWRMKCEHYFDVNNTYPGLWVRVAIIYFSGRAASWLRSTKAHVRFPNWED 240

Query: 2872 FVRALFERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELKSLFACTHARMPADFYVSLF 3051
            F  AL ++F        + +   ++QSG+V EY  +F+EL +        +   +    F
Sbjct: 241  FCAALSDKFDRDQHELLIRQMDGIRQSGTVWEYYEQFDELMNKLLVYDPVVNMHYLTHRF 300

Query: 3052 LSGLKEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAKPKLISQTNVISKGGQELQKT-- 3225
              GL  +IR  V + +P  LE A  +A+ QE+ L+ A    ++   V    G  L ++  
Sbjct: 301  TEGLYRKIRNVVLLQRPRDLESALAVALLQEEVLETADE--VTGKEVKKSEGNSLGRSVA 358

Query: 3226 SFTSKLPLKEP----------IKFKKISNEEMQR--------------RRELGLCFKCGE 3333
            +     PL  P          IK ++    E++R              RR  GLC+ C E
Sbjct: 359  NLRGAYPLPTPPMRSGGINMGIKSEEKKESEVRRSSGTNERLSSLKAQRRAQGLCYICAE 418

Query: 3334 KYSPQHKCALSEVNMLIVSEWIEEQDNGGELSLLQXXXXXXXXXXXXXXTDGIQLSLSAI 3513
            K+SP HKC+ + V +  V E         E  L                   + +SL A+
Sbjct: 419  KWSPTHKCS-NTVQLHAVQELFTVLHESVEDGLSTTDHVVEQTL--------MAVSLQAV 469

Query: 3514 SGTINGTTFRIVGRIKGREVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGET 3693
             GT  G   R++G+I+G+E+++L+D+GS+ SFI +RV   L     Q   + + +  G  
Sbjct: 470  QGTETGGCMRMLGQIQGKEILILVDSGSSASFISKRVASSLMGVLEQPVHVQVMVAGGAK 529

Query: 3694 RWNSVVCRGVSWNMQELEFCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKG 3873
                       W +Q   F  +L   +L   DMILG DWL Q+SP+T D+  + L     
Sbjct: 530  LHCCSEILNCEWTIQGHVFFTNLKVLELNNYDMILGMDWLMQHSPMTVDWTTKSLIIAYA 589

Query: 3874 GKGVSIQNSHRTVELKA-IEAEHLPKWLDRAAEVWLGQLCGVTVEHEEGKQSSDIQPLLE 4050
            G  + +       E  A I ++ L +  DR A   L Q C V     + +    +Q +L 
Sbjct: 590  GTQIQLYGVRSDTEQCAHISSKQLRELNDRTAVSNLVQFCSVFALEYQEQIPEVVQTVLT 649

Query: 4051 EFGDVFEKPRGLPPSREHEHSIILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQ 4230
            EF  VF++P+GLPP R+ +H+I L+ GA P  +R YR    QK EIE QV EML +G+IQ
Sbjct: 650  EFSSVFDEPKGLPPIRQFDHTIPLLPGAGPVNVRPYRYTPIQKNEIESQVQEMLSKGIIQ 709

Query: 4231 XXXXXXXXXIILVKKKDGSWRFCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKID 4410
                     ++LVKKKDGSWRFC+DYR LNA+TVK+K+P+P++D+LLDEL GAQ+FSK+D
Sbjct: 710  PSSSPFSSPVLLVKKKDGSWRFCVDYRHLNAITVKNKYPLPVIDELLDELAGAQWFSKLD 769

Query: 4411 LRSGYFQIRMKESDIPKTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVL 4590
            LRSGY QIRM   D  KTAF TH GHFEF+V+PFGLT+APATFQ +MN V    LR+ VL
Sbjct: 770  LRSGYHQIRMHPDDEHKTAFQTHHGHFEFRVLPFGLTSAPATFQGVMNSVLATLLRRCVL 829

Query: 4591 VFFDDILIYSTDLSYHLLHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRA 4770
            VF DDILIYS  L  H+ HL+ V  +L +HQL  K +KC F Q E+ YLGH+I   GV  
Sbjct: 830  VFVDDILIYSKSLEEHVQHLKTVFQILLKHQLKVKRTKCSFAQQELAYLGHIIQPNGVST 889

Query: 4771 DPKKIEEMTNWPSPLTVKQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKNS-FQWSTEA 4947
            DP+KI+ + +WP+P +VK+LR FLGL+GYYR+F+++YGI+SKPLTNLL+K   + W+ E 
Sbjct: 890  DPEKIQVIQHWPAPTSVKELRSFLGLSGYYRKFVRNYGILSKPLTNLLRKGQLYIWTAET 949

Query: 4948 E 4950
            E
Sbjct: 950  E 950


>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1513

 Score =  558 bits (1439), Expect = e-156
 Identities = 282/630 (44%), Positives = 390/630 (61%), Gaps = 9/630 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F+ LKQ M   PVL LPDF+K+F +E DAC  G+GAVLMQ  +PIAF+SK+LGPK+   S
Sbjct: 915  FKFLKQKMCSSPVLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSKSLGPKAAAQS 974

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
             YEKE MA+  A+ +W+HY  G+  +I+TD QSLK ++ Q++    Q K L KL+   + 
Sbjct: 975  IYEKEAMAILEALKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLKLMEYDYI 1034

Query: 362  VQYKKGAENKVADALSRKWE-------CLAISAVIPAWVEDVIGSYETDSEIQSIIARVT 520
            ++YK G +N VADALSR  +       C AI+ VIP W+ DV  SYE D +   I++ + 
Sbjct: 1035 IEYKAGKDNVVADALSRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAHKILSMIG 1094

Query: 521  LQQEAN--YSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVF 694
               + +  YS+++G+LRF+G IYVG    IR  ++   H S  GGHSGM+AT+ RIK +F
Sbjct: 1095 TNSDPDQHYSFENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMRATHHRIKALF 1154

Query: 695  YWPKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGK 874
            YWP L +               K EH+            +  + H+TMDFIEGLPKS+ K
Sbjct: 1155 YWPGLKKTVEMFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTHITMDFIEGLPKSKWK 1214

Query: 875  DVVLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQ 1054
            D +LVVVDR TK++HF+ L+HP++  +V   FM+ +++LHGMP +I+ DRD++FTS  +Q
Sbjct: 1215 DAILVVVDRLTKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMAIIIDRDRIFTSQLFQ 1274

Query: 1055 ELFSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTS 1234
            E+F    V+L+ S++YHPQTDGQTERVNQC+E YLR  +   PH W+ +LSLA WWYNT+
Sbjct: 1275 EIFKSMKVQLRFSTSYHPQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLAGWWYNTT 1334

Query: 1235 FHSAIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRM 1414
            +H++++M+PF+ALYGY P    E  +  NV                              
Sbjct: 1335 YHTSLQMTPFQALYGYPPPQINEFSISCNV------------------------------ 1364

Query: 1415 KQYADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKL 1594
               +   RTERS  VGD V++KLQPY+Q++   R + KL +K++GPF+VLEKIG VAYKL
Sbjct: 1365 ---SAEARTERSLNVGDMVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKIGQVAYKL 1421

Query: 1595 SLPATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPA 1774
             LP  + IH VFHVSQLKK +G+      +LP    +GQ+  +PVA+L RR++ +     
Sbjct: 1422 QLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAV 1481

Query: 1775 VQWLIQWSTLTLEDATWEFANEFMKKWPAF 1864
             QWLI W  L   DATWE A      +P F
Sbjct: 1482 TQWLILWENLGPADATWEDAAVIQSMYPTF 1511



 Score =  441 bits (1135), Expect = e-120
 Identities = 233/545 (42%), Positives = 332/545 (60%), Gaps = 7/545 (1%)
 Frame = +1

Query: 3322 KCGEKYSPQHKCALSE-VNMLIVSEWIEE--QDNGGELSLLQXXXXXXXXXXXXXXTDGI 3492
            K  E + P H+C + + +N L++ E   E  ++ G E    +               + +
Sbjct: 363  KHDEAWFPGHQCKVKKALNALLLEEEEYEGTEEVGREKKAQEKVLEETEHAPEEIDQEEL 422

Query: 3493 Q-LSLSAISGTINGTTFRIVGRIKGREVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLL 3669
              +S +A+ G     TF ++ +I GR  + L+D+GS  +F+D+    +   P   +    
Sbjct: 423  MYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTFMDQEYAIRNDCPLVSTDSKK 482

Query: 3670 ITLTNGETRWNSVVCRGVSWNMQELEFCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKK 3849
            + +  G    + V    + + +Q   F        L G D+ILG DW+ +YSP+T D KK
Sbjct: 483  VVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGADWIYKYSPITLDLKK 542

Query: 3850 QELSFMKGGKGVSIQNSHRTVELKAIEAEHLPKWLDRAAEVWLGQLCGVTVEHEEGKQSS 4029
            +EL   KG K +++Q+   T +   +++  + K + +    +L Q+  V  E +  +  S
Sbjct: 543  RELGITKGEKVITLQDFTNTGKHLLVDSSKVDKIIRKGGLGYLFQITQVAEESDVEESIS 602

Query: 4030 ---DIQPLLEEFGDVFEKPRGLPPSREHEHSIILVEGAKPFKLRSYRLPHYQKTEIEKQV 4200
               DIQ +L+ F  V EKP+GLPP R  +H I L +GA P  LR YR+PH+QK  +EK +
Sbjct: 603  IPDDIQDILQRFPTVLEKPKGLPPQRGCDHVITLKDGAIPPNLRPYRVPHHQKEAMEKII 662

Query: 4201 SEMLQEGVIQXXXXXXXXXIILVKKKDGSWRFCIDYRQLNALTVKDKFPIPMVDDLLDEL 4380
            +E+++   IQ          ++V+KKDGSWR C+DYRQLNA TVK+KFP+P+++DLLDEL
Sbjct: 663  AELIESKEIQVSNSPYSSPAVMVRKKDGSWRLCVDYRQLNAQTVKNKFPMPIIEDLLDEL 722

Query: 4381 HGAQFFSKIDLRSGYFQIRMKESDIPKTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKV 4560
            +GA+ F+K+DL SGY QIRM   DIPKTAF TH GH+E++VMPFGLTNAPATFQSLMN+V
Sbjct: 723  NGAKIFTKLDLMSGYHQIRMSRPDIPKTAFRTHLGHYEYQVMPFGLTNAPATFQSLMNQV 782

Query: 4561 FGPYLRKFVLVFFDDILIYSTDLSYHLLHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLG 4740
              P+ RKFVLVFFDDILIYS D   H  H+R+VL VL+ + L  K  KC FG   V YLG
Sbjct: 783  LAPFFRKFVLVFFDDILIYSKDREEHKEHIRLVLQVLKANNLVIKPKKCAFGLSSVSYLG 842

Query: 4741 HLISGEGVRADPKKIEEMTNWPSPLTVKQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKK 4920
            H+IS  GV  DP K+E++ +WP P  V  LR FLG+TGYYRRFI+ Y ++ +PL ++LKK
Sbjct: 843  HIISQNGVATDPGKVEKIVSWPIPKNVTDLRKFLGMTGYYRRFIQGYVLICRPLHDMLKK 902

Query: 4921 NSFQW 4935
              FQW
Sbjct: 903  EGFQW 907


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1411

 Score =  558 bits (1439), Expect = e-156
 Identities = 282/630 (44%), Positives = 390/630 (61%), Gaps = 9/630 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F+ LKQ M   PVL LPDF+K+F +E DAC  G+GAVLMQ  +PIAF+SK+LGPK+   S
Sbjct: 813  FKFLKQKMCSSPVLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSKSLGPKAAAQS 872

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
             YEKE MA+  A+ +W+HY  G+  +I+TD QSLK ++ Q++    Q K L KL+   + 
Sbjct: 873  IYEKEAMAILEALKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLKLMEYDYI 932

Query: 362  VQYKKGAENKVADALSRKWE-------CLAISAVIPAWVEDVIGSYETDSEIQSIIARVT 520
            ++YK G +N VADALSR  +       C AI+ VIP W+ DV  SYE D +   I++ + 
Sbjct: 933  IEYKAGKDNVVADALSRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAHKILSMIG 992

Query: 521  LQQEAN--YSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVF 694
               + +  YS+++G+LRF+G IYVG    IR  ++   H S  GGHSGM+AT+ RIK +F
Sbjct: 993  TNSDPDQHYSFENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMRATHHRIKALF 1052

Query: 695  YWPKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGK 874
            YWP L +               K EH+            +  + H+TMDFIEGLPKS+ K
Sbjct: 1053 YWPGLKKTVEMFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTHITMDFIEGLPKSKWK 1112

Query: 875  DVVLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQ 1054
            D +LVVVDR TK++HF+ L+HP++  +V   FM+ +++LHGMP +I+ DRD++FTS  +Q
Sbjct: 1113 DAILVVVDRLTKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMAIIIDRDRIFTSQLFQ 1172

Query: 1055 ELFSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTS 1234
            E+F    V+L+ S++YHPQTDGQTERVNQC+E YLR  +   PH W+ +LSLA WWYNT+
Sbjct: 1173 EIFKSMKVQLRFSTSYHPQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLAGWWYNTT 1232

Query: 1235 FHSAIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRM 1414
            +H++++M+PF+ALYGY P    E  +  NV                              
Sbjct: 1233 YHTSLQMTPFQALYGYPPPQINEFSISCNV------------------------------ 1262

Query: 1415 KQYADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKL 1594
               +   RTERS  VGD V++KLQPY+Q++   R + KL +K++GPF+VLEKIG VAYKL
Sbjct: 1263 ---SAEARTERSLNVGDMVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKIGQVAYKL 1319

Query: 1595 SLPATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPA 1774
             LP  + IH VFHVSQLKK +G+      +LP    +GQ+  +PVA+L RR++ +     
Sbjct: 1320 QLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAV 1379

Query: 1775 VQWLIQWSTLTLEDATWEFANEFMKKWPAF 1864
             QWLI W  L   DATWE A      +P F
Sbjct: 1380 TQWLILWENLGPADATWEDAAVIQSMYPTF 1409



 Score =  447 bits (1149), Expect = e-122
 Identities = 236/556 (42%), Positives = 339/556 (60%), Gaps = 7/556 (1%)
 Frame = +1

Query: 3289 MQRRRELGLCFKCGEKYSPQHKCALSE-VNMLIVSEWIEE--QDNGGELSLLQXXXXXXX 3459
            M+R++    C+ C E + P H+C + + +N L++ E   E  ++ G E    +       
Sbjct: 254  MERKK----CWFCKEAWFPGHQCKVKKALNALLLEEEEYEGTEEVGREKKAQEKVLEETE 309

Query: 3460 XXXXXXXTDGIQ-LSLSAISGTINGTTFRIVGRIKGREVIMLIDTGSTHSFIDERVVKQL 3636
                    + +  +S +A+ G     TF ++ +I GR  + L+D+GS  +F+D+    + 
Sbjct: 310  HAPEEIDQEELMYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTFMDQEYAIRN 369

Query: 3637 KLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQELEFCQDLYEWKLGGSDMILGTDWLQ 3816
              P   +    + +  G    + V    + + +Q   F        L G D+ILG DW+ 
Sbjct: 370  DCPLVSTDSKKVVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGADWIY 429

Query: 3817 QYSPVTFDYKKQELSFMKGGKGVSIQNSHRTVELKAIEAEHLPKWLDRAAEVWLGQLCGV 3996
            +YSP+T D KK+EL   KG K +++Q+   T +   +++  + K + +    +L Q+  V
Sbjct: 430  KYSPITLDLKKRELGITKGEKVITLQDFTNTGKHLLVDSSKVDKIIRKGGLGYLFQITQV 489

Query: 3997 TVEHEEGKQSS---DIQPLLEEFGDVFEKPRGLPPSREHEHSIILVEGAKPFKLRSYRLP 4167
              E +  +  S   DIQ +L+ F  V EKP+GLPP R  +H I L +GA P  LR YR+P
Sbjct: 490  AEESDVEESISIPDDIQDILQRFPTVLEKPKGLPPQRGCDHVITLKDGAIPPNLRPYRVP 549

Query: 4168 HYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVKKKDGSWRFCIDYRQLNALTVKDKFP 4347
            H+QK  +EK ++E+++   IQ          ++V+KKDGSWR C+DYRQLNA TVK+KFP
Sbjct: 550  HHQKEAMEKIIAELIESKEIQVSNSPYSSPAVMVRKKDGSWRLCVDYRQLNAQTVKNKFP 609

Query: 4348 IPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESDIPKTAFSTHFGHFEFKVMPFGLTNA 4527
            +P+++DLLDEL+GA+ F+K+DL SGY QIRM   DIPKTAF TH GH+E++VMPFGLTNA
Sbjct: 610  MPIIEDLLDELNGAKIFTKLDLMSGYHQIRMSRPDIPKTAFRTHLGHYEYQVMPFGLTNA 669

Query: 4528 PATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLSYHLLHLRIVLTVLREHQLFGKMSKC 4707
            PATFQSLMN+V  P+ RKFVLVFFDDILIYS D   H  H+R+VL VL+ + L  K  KC
Sbjct: 670  PATFQSLMNQVLAPFFRKFVLVFFDDILIYSKDREEHKEHIRLVLQVLKANNLVIKPKKC 729

Query: 4708 IFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSPLTVKQLRGFLGLTGYYRRFIKSYGI 4887
             FG   V YLGH+IS  GV  DP K+E++ +WP P  V  LR FLG+TGYYRRFI+ Y +
Sbjct: 730  AFGLSSVSYLGHIISQNGVATDPGKVEKIVSWPIPKNVTDLRKFLGMTGYYRRFIQGYVL 789

Query: 4888 VSKPLTNLLKKNSFQW 4935
            + +PL ++LKK  FQW
Sbjct: 790  ICRPLHDMLKKEGFQW 805


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score =  557 bits (1435), Expect = e-155
 Identities = 304/706 (43%), Positives = 425/706 (60%), Gaps = 5/706 (0%)
 Frame = +1

Query: 2851 GTHDWEMFVRALFERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELKSLFACTHARMPA 3030
            G   WE FVRAL  RF      + +    +LKQ+ +V +Y  +FE L +        +  
Sbjct: 113  GISSWEGFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLR----GLAE 168

Query: 3031 DFYVSLFLSGLKEEIRGPVQMFQPASLEKAFRLAMDQEKCLKPAK--PKLISQTNVISKG 3204
             + +S FLSGL+E+IR  V+M  P++L  AF LA  QE+     +   KL S    ++ G
Sbjct: 169  SYKLSCFLSGLREDIRFMVRMLNPSNLHIAFGLAKMQEENXAALRRTAKLGSVPTRLAIG 228

Query: 3205 GQELQKTSFTSKLPLKEPIKFKKISNEEMQRRRELGLCFKCGEKYSPQHKCALSEVNMLI 3384
                      S    +  +  +++S  +M+ RR+ GLC+ C +K++P HKC   +   L 
Sbjct: 229  PP--------SPPEKRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKC---KSXRLF 277

Query: 3385 VSEWIEEQDNGGELSLLQXXXXXXXXXXXXXXTDGIQLSLSAISGTINGTTFRIVGRIKG 3564
            + E  E  D+    S +                    +S+ A+ G+ N  T R +G I G
Sbjct: 278  IMECDESSDDEVPKSEVAEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICG 337

Query: 3565 REVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQEL 3744
            R V++L+DTGSTH+F+D  V+++  LP + ++ L + + NG+   +   C  V  +MQ  
Sbjct: 338  RAVVILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAVPLHMQGN 397

Query: 3745 EFCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNSHRTVELKA 3924
             +  D Y   LGG D++LG  WLQ   P+ +D+ + ++ F    K   +Q    T  +  
Sbjct: 398  LYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFSVWDKPRKLQGMSPT-GISL 456

Query: 3925 IEAEHLPKWL---DRAAEVWLGQLCGVTVEHEEGKQSSDIQPLLEEFGDVFEKPRGLPPS 4095
            +E E   K      R   + L      ++   E      I  LL  + +VF +P+GLPP+
Sbjct: 457  VEGEKFGKVSRQNKRGLVIQLIDFENSSLLSIETSAEPLIYDLLNLYSEVFSEPKGLPPT 516

Query: 4096 REHEHSIILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVKK 4275
            R H+H I+L  GAKP  +  YR P++QK++IE  V EMLQ G+++         ++LV+K
Sbjct: 517  RNHDHHIVLHSGAKPVCVGPYRYPYFQKSKIENIVHEMLQSGIVRPSQSPFSSPVLLVRK 576

Query: 4276 KDGSWRFCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESDI 4455
             DGSWR C+DYR LN  T+K KFPIP+VD+LLDELHG+  FSK+DLRSGY QIR+   DI
Sbjct: 577  HDGSWRLCVDYRALNKETIKVKFPIPIVDELLDELHGSTIFSKLDLRSGYHQIRVHPEDI 636

Query: 4456 PKTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLSY 4635
            PKTAF TH GH+EF VMPFGLTNAPATFQSLMN +F PYLRKF+LVFFDDIL+YS +L+ 
Sbjct: 637  PKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNDIFKPYLRKFILVFFDDILVYSKNLAD 696

Query: 4636 HLLHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSPL 4815
            H+ HL+ VL +L++HQLF K SKC FG  E+EYLGHLIS +GV+ADP KIE M NWP P 
Sbjct: 697  HVYHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLISKDGVQADPTKIEAMLNWPFPT 756

Query: 4816 TVKQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKNSFQWSTEAEQ 4953
            ++K LRGFLGLTGYYR+FIK YG+++ PLT LLKKNSF+W+  A++
Sbjct: 757  SLKSLRGFLGLTGYYRKFIKGYGLIAAPLTXLLKKNSFKWTESAKR 802



 Score =  504 bits (1299), Expect = e-139
 Identities = 273/600 (45%), Positives = 377/600 (62%), Gaps = 13/600 (2%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            FQ+LK  ++ PPVLALPDF+  F ++ DA   G+GAVLMQ+G+P+A+ S+A+  K+L +S
Sbjct: 804  FQDLKHAVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAIHGKALQLS 863

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TYEKELMAL  AV +W+ YL G++F I+TD QSLK+L+E+K+    QQ+W++KLLG  F 
Sbjct: 864  TYEKELMALVLAVKKWRSYLLGHNFKIQTDQQSLKYLLEEKMGTPLQQQWITKLLGYEFV 923

Query: 362  VQYKKGAENKVADALSRKWE------CLAISAVIPAWVEDVIGSYETDSEIQSIIARVTL 523
            V+YK+G ENKVADALSRK E        AI+A    W+E +  SY  D ++Q II  +  
Sbjct: 924  VEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTSYAIDPKLQQIIKNLEQ 983

Query: 524  QQEA--NYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFY 697
               A  NY  +DG+L ++G +Y+  +  +R++I+  +H+S  GGHSG   T  R K  FY
Sbjct: 984  GSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHSSPQGGHSGFHKTLHRAKSEFY 1043

Query: 698  WPKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKD 877
            W  + ++            +NK E++                       ++ LP    K 
Sbjct: 1044 WEGMRKEVRRFIKECDICQQNKSENIHPAG------------------LLQPLPIPT-KS 1084

Query: 878  VVLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQE 1057
            V++VVVDR +K++HFI ++HP+TA K+A  F+  ++KLHG+P SIV+DRD  FTS FW+E
Sbjct: 1085 VIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTFTSTFWKE 1144

Query: 1058 LFSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSF 1237
            LF + G  LK SSAYHPQTDGQTE VN+ VE YLRCFS  +P  W K+L LAEWWYNT+ 
Sbjct: 1145 LFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWXKWLPLAEWWYNTNI 1204

Query: 1238 HSAIKMSPFEALYGYSPT-----TFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAA 1402
            H++ K+SPFE++YGY P      T G   + E      V   L+ R +I  IL +     
Sbjct: 1205 HASTKLSPFESVYGYPPPKLIPYTPGTTQLQE------VENTLKTRDEIIRILHI----- 1253

Query: 1403 VNRMKQYADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSV 1582
                      KRT RSF +GD V+++LQPYKQ SV  R   KLS +++GP++VLEKIG+V
Sbjct: 1254 ----------KRTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTV 1303

Query: 1583 AYKLSLPATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQR 1762
            AY+L LP  +KIH VFHVS LK+K+GE   +   LP    +G +  EP  IL RRL K++
Sbjct: 1304 AYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPPADKDGVIRPEPEEILHRRLKKKK 1363


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score =  555 bits (1429), Expect = e-154
 Identities = 287/628 (45%), Positives = 403/628 (64%), Gaps = 9/628 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            F  LKQ ++  PVL+LPDF K F VETDA   G+GAVL Q+  PIA+ SKALGP++ G+S
Sbjct: 896  FHTLKQALASAPVLSLPDFQKTFTVETDASDCGIGAVLSQDKHPIAYVSKALGPRTRGLS 955

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TYEKE MA+  AV  W+ YL+   FII TDH SL  L +Q++    Q K  +KLLGL ++
Sbjct: 956  TYEKECMAILLAVDHWRSYLQHGEFIILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYK 1015

Query: 362  VQYKKGAENKVADALSRKW-----ECLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQ 526
            + Y+KG+ N  ADALSRK+     E  AIS+ +P W+ +V   YE D++   +++ + + 
Sbjct: 1016 ICYRKGSSNAAADALSRKFQDSNSEIFAISSSVPQWLMEVTQGYEKDAQAAKLLSTLAIH 1075

Query: 527  QEANYSY--KDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYW 700
             E +  Y   +G++R++  I+VGN   ++ +++  +H S  GGHSG   TY +IK++F W
Sbjct: 1076 PEKHIHYFLDNGIIRYKNRIWVGNNPELQLKLIRELHASPVGGHSGFPVTYRKIKQLFAW 1135

Query: 701  PKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDV 880
            P + +             + K + +            E  +  +++DFIEGLPKS G + 
Sbjct: 1136 PNMKKMIKESVQRCQVCLQAKPDRLKYPGLLQPLPVPEGSWQAVSLDFIEGLPKSAGYNC 1195

Query: 881  VLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQEL 1060
            +LVVVDRF+K++HF+ L HPFTA  VA  +M  +YKLHG+P++IVSDRDK+FTS  W++L
Sbjct: 1196 ILVVVDRFSKYAHFVALKHPFTAIDVAQAYMFHIYKLHGLPQTIVSDRDKIFTSQLWEQL 1255

Query: 1061 FSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFH 1240
            F  +G KL  SSAYHPQ+DGQTERVNQC+E+YLRCF    P  W+ +L LAE+WYN+++H
Sbjct: 1256 FLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLHLAEYWYNSTYH 1315

Query: 1241 SAIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQ 1420
            S++  +PFE LYGY P  F  G+   +     +S  L +RK +  +++ +L  A  +MK 
Sbjct: 1316 SSLGTTPFEVLYGYPPNHF--GISSRDCAIPELSVWLRDRKFMQQLVQQHLHRAQQQMKH 1373

Query: 1421 YADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSL 1600
            +AD KR+ R F +GDWV++KLQPY QSSV  R+  KL+ KY+GPFQV++K+G+VAYKL L
Sbjct: 1374 FADKKRSFRQFTIGDWVYLKLQPYVQSSVAPRANHKLAFKYYGPFQVIDKLGTVAYKLQL 1433

Query: 1601 PATSKIHRVFHVSQLKKKVG--EDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPA 1774
            P TS +H VFHVS LK   G  +  F+Q  LP      QL   P+AILD+RL K+ N   
Sbjct: 1434 PETSSVHPVFHVSLLKPAKGFTQPAFLQ--LPSEVVSWQL---PLAILDQRLAKKGNSVI 1488

Query: 1775 VQWLIQWSTLTLEDATWEFANEFMKKWP 1858
             Q LI WS    E ATWE   +   ++P
Sbjct: 1489 TQVLIHWSHTVPEQATWEDLEDLKTRFP 1516



 Score =  514 bits (1325), Expect = e-142
 Identities = 302/767 (39%), Positives = 437/767 (56%), Gaps = 19/767 (2%)
 Frame = +1

Query: 2707 GGNPREWVLKGNQYFKLHQIPDSMKLELAQLYMKGEAFIWGQSFIAEHGTHDWEMFVRAL 2886
            G NP+ W     QYF ++       +++A L   G A  W QS  ++ G   W     A+
Sbjct: 137  GDNPQMWKANCEQYFDVYGTHPVNWVKIATLNFVGNAAFWLQSVRSQMGGISWNGLCDAV 196

Query: 2887 FERFAEGTTGESVGEFSKLKQSGSVGEYMRRFEELKSLFACTHARMPADFYVSLFLSGLK 3066
              RFA+      + ++  + Q+G+V EY+ +F+ L          +   ++V+ F+ GLK
Sbjct: 197  CTRFAKDKHQALIRQWIHIVQTGTVSEYVEKFDGLMHQMIAYDPSLIPVYFVTKFIEGLK 256

Query: 3067 EEIRGPVQMFQPASLEKAFRLAMDQEKCL---KPAKPKL------ISQTNVISKGGQELQ 3219
            +E+R  V + +P  L+ A  +A+ QE+ +   K A PK       I    ++S       
Sbjct: 257  DEVRVVVLVQRPQDLDTACAIALLQEEAMEGVKSASPKRSEPIFGIKSNRMMSNYSVPTS 316

Query: 3220 KTSFTSKLPLKEPIKFKKISNEEMQR----RRELGLCFKCGEKYSPQHKCALSEVNMLIV 3387
              +       +   +  +  +E++      RR  GLCF CGEK+  + KCA S + + +V
Sbjct: 317  TKTTNVTAEDRRGTEAARARDEKLAALKSYRRAKGLCFTCGEKWGKERKCA-SAIQLHVV 375

Query: 3388 SEWIEEQDNGGELSLLQXXXXXXXXXXXXXXTDGIQLSLS--AISGTINGTTFRIVGRIK 3561
             E +E       L+L                  G  LS+S  A+ GT +  T ++ G I+
Sbjct: 376  EELLET------LTLGYESESDPKSEDTEDSQHGTLLSISQQAVWGTESSRTIKLRGWIQ 429

Query: 3562 GREVIMLIDTGSTHSFIDERVVKQLKLPRSQSQPLLITLTNGETRWNSVVCRGVSWNMQE 3741
              E++ML+D+GSTHSFID  V  +L        PL + + +G T   +      +W MQ 
Sbjct: 430  DMELLMLVDSGSTHSFIDSEVSLRLPGVHKLQTPLTVRIADGGTMKCTHEISSCNWWMQG 489

Query: 3742 LEFCQDLYEWKLGGSDMILGTDWLQQYSPVTFDYKKQELSFMKGGKGVSIQNS-HRTVEL 3918
             +FC       LG  D+ILG DWL+ +SP+  D+  + + F+  GK V +Q    ++V+ 
Sbjct: 490  NQFCNSFRVLPLGNYDIILGMDWLELFSPMQVDWANKWMEFLYQGKLVRLQGILPKSVQC 549

Query: 3919 KAIEAEHLPKWLDRAAEV-WLGQLCGVTVEHEEGKQSSD-IQPLLEEFGDVFEKPRGLPP 4092
             +I   H    L+R   + +L QL  VT  HEE     + ++ ++++F D+F++P GLPP
Sbjct: 550  SSI-TNHQLCGLNRLGSLSYLVQLQSVT--HEENSSVPEAVKEIIQDFHDIFQEPEGLPP 606

Query: 4093 SREHEHSIILVEGAKPFKLRSYRLPHYQKTEIEKQVSEMLQEGVIQXXXXXXXXXIILVK 4272
             R  +H+I L+ GAKP  LR YR     K EIEKQ++EML  GVIQ          ILVK
Sbjct: 607  RRACDHTINLIPGAKPINLRPYRHNPALKDEIEKQITEMLSSGVIQHSQSPFSSPAILVK 666

Query: 4273 KKDGSWRFCIDYRQLNALTVKDKFPIPMVDDLLDELHGAQFFSKIDLRSGYFQIRMKESD 4452
            KKDG+WR  IDYRQLN +TVK K+P+P++++LLDEL GA++F+K+DLRSGY QIRM E +
Sbjct: 667  KKDGTWRLVIDYRQLNNITVKTKYPVPVIEELLDELTGAKWFTKLDLRSGYHQIRMAEGE 726

Query: 4453 IPKTAFSTHFGHFEFKVMPFGLTNAPATFQSLMNKVFGPYLRKFVLVFFDDILIYSTDLS 4632
             PKTAF TH GH+E+KVM FGLT APATF   MN      LRKF LVFFDDILIYS  LS
Sbjct: 727  EPKTAFQTHSGHYEYKVMSFGLTGAPATFLKAMNDTLKSVLRKFALVFFDDILIYSPTLS 786

Query: 4633 YHLLHLRIVLTVLREHQLFGKMSKCIFGQHEVEYLGHLISGEGVRADPKKIEEMTNWPSP 4812
             HL HL+ VL +LR H    K+SKC FGQ ++ YLGH+I   GV  DP K++++ +W  P
Sbjct: 787  SHLEHLKQVLQLLRNHHWKVKLSKCSFGQQQLSYLGHIIGVNGVATDPSKVQDVLDWAVP 846

Query: 4813 LTVKQLRGFLGLTGYYRRFIKSYGIVSKPLTNLLKKN-SFQWSTEAE 4950
            ++ K+LRGFLGL GYYR+F+K++GI+SKPLT LL+K   + W+TE +
Sbjct: 847  VSTKKLRGFLGLAGYYRKFVKNFGIISKPLTQLLRKGVPYVWTTETD 893


>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
            gi|255678117|dbj|BAH94093.1| Os08g0123950, partial [Oryza
            sativa Japonica Group]
          Length = 783

 Score =  554 bits (1428), Expect = e-154
 Identities = 291/626 (46%), Positives = 401/626 (64%), Gaps = 7/626 (1%)
 Frame = +2

Query: 2    FQNLKQLMSQPPVLALPDFTKKFIVETDACFNGMGAVLMQEGKPIAFFSKALGPKSLGMS 181
            FQ LK  ++  PVLALP+F K F+VETDA   G+GAVL QE  PIA+ SKALGP++ G+S
Sbjct: 81   FQALKTSLASAPVLALPNFQKTFVVETDASDYGIGAVLSQEKHPIAYISKALGPRTRGLS 140

Query: 182  TYEKELMALATAVHEWKHYLEGNSFIIRTDHQSLKFLVEQKISIAAQQKWLSKLLGLSFE 361
            TYEKE +A+  AV  W+ YL+   FII TDH SL  L +Q++    Q K  +KLLGL ++
Sbjct: 141  TYEKECLAMIMAVDHWRSYLQHVEFIILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYK 200

Query: 362  VQYKKGAENKVADALSRK-----WECLAISAVIPAWVEDVIGSYETDSEIQSIIARVTLQ 526
            + Y+KG+ N  ADALSRK      E  AIS  +P W+ +V+ SY+TD     ++A +TL 
Sbjct: 201  ICYRKGSTNAAADALSRKPQQSEEEFNAISQCVPQWLMEVLQSYDTDPHATQLVAALTLN 260

Query: 527  QEA--NYSYKDGVLRFQGSIYVGNTGGIRKRIMDAIHNSNSGGHSGMQATYLRIKKVFYW 700
              +  ++S + GVLR++G+I++GN+  ++ +I++ +H S  GGHSG   TY RIK++F W
Sbjct: 261  PNSKPHFSLQHGVLRYKGNIWIGNSPDLQLKIINEMHASPVGGHSGFPVTYRRIKQLFAW 320

Query: 701  PKLWEDXXXXXXXXXXXXRNKGEHVXXXXXXXXXXXXEKPFAHLTMDFIEGLPKSEGKDV 880
              +               + K +              +  +  +++DFIEGLP+S   + 
Sbjct: 321  NGMKSQIKETLANCQICAQAKPDRSRYPRLLQPLPVPKGAWQTISLDFIEGLPRSSHYNC 380

Query: 881  VLVVVDRFTKFSHFIGLTHPFTAPKVAHEFMDKVYKLHGMPESIVSDRDKVFTSHFWQEL 1060
            +LVVVD+F+K+SHFI L HPFTA  VA  FM  VYKLHG+P+ I+SDRDK+FTS  W++L
Sbjct: 381  ILVVVDKFSKYSHFIPLRHPFTAIDVAKAFMSNVYKLHGLPQIIISDRDKIFTSQLWEQL 440

Query: 1061 FSVSGVKLKLSSAYHPQTDGQTERVNQCVEMYLRCFSSHRPHIWHKFLSLAEWWYNTSFH 1240
            F  SG KL  SSAYHPQ+DGQTER NQC+E+YL+CF    P  W  +L LAE+WYN S+H
Sbjct: 441  FLRSGTKLHYSSAYHPQSDGQTERGNQCLEIYLKCFVQSAPSKWPSWLHLAEYWYNNSYH 500

Query: 1241 SAIKMSPFEALYGYSPTTFGEGMVLENVKHVGVSQMLEERKKIDAILRVNLTAAVNRMKQ 1420
            S I  +PFEALYGY P  F  G+ + +  +  +   +++RK +  +++ +L  A  +MK 
Sbjct: 501  STIDRTPFEALYGYPPRHF--GISIRDCDNSELITWMQDRKLMQQLVQQHLHRAQQQMKL 558

Query: 1421 YADTKRTERSFEVGDWVFVKLQPYKQSSVFGRSTQKLSAKYFGPFQVLEKIGSVAYKLSL 1600
            +AD KR+ R F+VG+WV++KLQPY QSSV  R+  KL+ KYFGPFQ+LEK+G+VAYKL L
Sbjct: 559  FADKKRSFRQFQVGEWVYLKLQPYVQSSVAPRANHKLAFKYFGPFQILEKLGTVAYKLQL 618

Query: 1601 PATSKIHRVFHVSQLKKKVGEDTFVQKDLPETSTEGQLLVEPVAILDRRLVKQRNKPAVQ 1780
            PATS IH VFHVS LK+  G    V   L  T +  Q    P+A+LD RL K+ N    Q
Sbjct: 619  PATSSIHPVFHVSLLKEAKGFQPSVHTPLSPTYSAVQY---PIALLDHRLTKKGNHTVHQ 675

Query: 1781 WLIQWSTLTLEDATWEFANEFMKKWP 1858
             L  WS      ATWE  ++   ++P
Sbjct: 676  VLTHWSDTIPAQATWEDLHDLKARFP 701



 Score =  100 bits (248), Expect = 9e-18
 Identities = 43/77 (55%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
 Frame = +1

Query: 4723 EVEYLGHLISGEGVRADPKKIEEMTNWPSPLTVKQLRGFLGLTGYYRRFIKSYGIVSKPL 4902
            ++ YLGH+I   GV  DP+K++++ NW  P  VK+LRGFLGL GYYR+F++ +G+ SKPL
Sbjct: 2    QLSYLGHIIGANGVATDPQKVQDILNWEIPTNVKKLRGFLGLAGYYRKFVQGFGLKSKPL 61

Query: 4903 TNLLKKN-SFQWSTEAE 4950
            TNLL+K   F WSTEA+
Sbjct: 62   TNLLRKGVPFVWSTEAD 78