BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00004880
         (3085 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   285   3e-89
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   330   2e-87
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe...   328   7e-87
gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]       290   1e-85
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe...   324   1e-85
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   306   5e-83
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   292   1e-81
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...   311   1e-81
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   309   4e-81
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   308   1e-80
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...   307   2e-80
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   306   5e-80
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   301   1e-79
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   296   4e-77
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             295   1e-76
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              295   1e-76
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   295   1e-76
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...   294   1e-76
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   294   1e-76
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...   294   1e-76

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  285 bits (728), Expect(2) = 3e-89
 Identities = 179/537 (33%), Positives = 281/537 (52%), Gaps = 11/537 (2%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNL--IAPYIFAD 188
            +++ N I+ I      W +  E+I  + E Y++ +FTS+ P+     + L  +   +  +
Sbjct: 367  RKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHVKRSVTQE 426

Query: 189  ENASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDH 368
             N  L+       I   +  M   K+PGPDG+   F++ +WHIIG  +   V     +  
Sbjct: 427  YNDILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFVSSILHNYS 486

Query: 369  LLKTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAA 548
                 N T +ALIPK      +  F+PI+LCN++YKI +K +  R++  L  I +  Q+A
Sbjct: 487  CPGNVNCTNIALIPKVKSPTVVSEFRPISLCNVLYKIASKAIVLRLKRFLPCIATENQSA 546

Query: 549  FIPSRCMSDKIIISYEIIHHLNQKKRNLS---LMALKVDMAKAYDRVEWTLLTQILTKHG 719
            F+P R +SD  +I+ EI H +  KKRN S   LMA+K+DM+KAYDRVEW  L ++L   G
Sbjct: 547  FVPGRLISDNSLIALEIFHTM--KKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMG 604

Query: 720  FSDHFVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITR 899
            F   +V+L ++CV+T  +S +ING V G    S+GLRQGDP+SP LF    +  S+++ +
Sbjct: 605  FDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQ 664

Query: 900  AELGGSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFD 1079
              +   I G K  R  P IS L+FADD  +F RAT QE   + +ILN Y   SGQ +N++
Sbjct: 665  KVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYE 724

Query: 1080 KSVIHFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM-KTVA 1256
            KS + FS+      K E++ +L + +      YLG P   G S+   F  ++++M K + 
Sbjct: 725  KSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLR 784

Query: 1257 GNKNPFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMI--TGKD- 1427
            G K    KL      E   K     L  Y   +Y+     I+  EI S ++     GK  
Sbjct: 785  GWK---EKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQ--EIHSAMARFWWGGKGD 839

Query: 1428 --TLTLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKY 1592
               +   +W+ MC PK  GG+ F++    N   + K  W++  +K+    +++ +KY
Sbjct: 840  ERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKY 896



 Score = 74.3 bits (181), Expect(2) = 3e-89
 Identities = 71/334 (21%), Positives = 126/334 (37%), Gaps = 7/334 (2%)
 Frame = +2

Query: 1658 IWETKDLIEKSACVKVGLYSTAHIWECPWIPDLEGFKXXXXXXXXXXXXLVLELIDRDLK 1837
            IW  K L+ +    +VG  +   IW  PW+ D EG              +V +L+D + K
Sbjct: 918  IWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEG--RFIKSARVEGLEVVGDLMDVERK 975

Query: 1838 TWNCSLVMQTFPIHIAQAILKIKIPPSQEHDSLVWTPXXXXXXXXXXXXLIETKQRFAIQ 2017
             WN  L+ + F     Q IL I +      D L W                  K  + + 
Sbjct: 976  EWNVELIERHFNERDQQCILAIPLSTRCLQDELTWA--------YSKDGTYSVKTAYMLG 1027

Query: 2018 SGDN----RKL*KDLWSSSLHPRHQQLLCKIIVNALPTKMRLKNFLPVESCLCPICXXXX 2185
             G N     ++   LWS ++ P+ +  L +   ++LP +  L+    ++   CP C    
Sbjct: 1028 KGGNLDDFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCARED 1087

Query: 2186 XXXXXXFLKCPLTRAAWFNSPWNLKIEAFGH*NILRWISKLVNLSN*IAPNIEDRKEILN 2365
                  F +CP++   W         E  G   +L  I         +  +  D K ++ 
Sbjct: 1088 ETQFHLFYRCPMSLKLW---------EELGSYILLPGIEDEAMCDTLVRWSQMDAK-VVQ 1137

Query: 2366 FAAVLMESIWLCRNN--VDHRKQMPN-WNEWISTIVRSSRRY*LASINRKKNHAGIRPNQ 2536
                ++ ++W+ RN    +H  Q      + I   V     Y +      ++ A + P++
Sbjct: 1138 KGCYILWNVWVERNRRVFEHTSQPATVVGQRIMRQVEDFNNYAVKIYGGMRSSAALSPSR 1197

Query: 2537 IWKTPLPGWTKINYDVAMEDTGLVYCAYVIREQD 2638
             W  P  G  K+N D ++ + G V    + R+ +
Sbjct: 1198 -WYAPPVGAIKLNTDASLAEEGWVGLGVIARDSE 1230


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  330 bits (847), Expect = 2e-87
 Identities = 185/545 (33%), Positives = 310/545 (56%), Gaps = 8/545 (1%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNP-NFPIDLDNLIAPYIFADE 191
            ++R N IN ++  + +W   RE+I  + + Y++ LF + +P N  + L+ L +  +  D 
Sbjct: 365  RKRRNTINELLDENGVWKKGREEICGVVQHYFEGLFATDSPVNMELALEGL-SHCVSTDM 423

Query: 192  NASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHL 371
            N +L+ +P    +K+ +++M   K+PG DGL   F + +WHI+G  +I  VQ ++     
Sbjct: 424  NTALLMLPSGDEVKEALFAMHPNKAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGD 483

Query: 372  LKTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAF 551
            L   N T + LIPK +    M +F+PI+LC ++YKI++K LA+R++ +L  I+SP Q+AF
Sbjct: 484  LGVVNKTCIVLIPKCDHPQSMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAF 543

Query: 552  IPSRCMSDKIIISYEIIHHLNQKKRNLS-LMALKVDMAKAYDRVEWTLLTQILTKHGFSD 728
            +P R ++D  ++++EI H + +K  N + + ALK+DM+KAYDRVEW  L +++ K GF D
Sbjct: 544  VPRRLITDNALVAFEIFHAMKRKDANKNGVCALKLDMSKAYDRVEWCFLERVMKKMGFCD 603

Query: 729  HFVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAEL 908
             ++   + C+S+  F+  +NG V G    S+GLRQGDP+SP LF    +  S L+++A  
Sbjct: 604  GWIDRVMACISSVSFTFNVNGVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAAS 663

Query: 909  GGSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSV 1088
               I G +ICR +P +S L FADD  +F +A++QE   + +I++ Y   SGQ VN  K+ 
Sbjct: 664  EKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVADIISKYERASGQQVNLSKTE 723

Query: 1089 IHFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM-KTVAGNK 1265
            + FS++ D   ++ I+N+L + E   +  YLG P   G S+   F  I E++ K + G K
Sbjct: 724  VVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWK 783

Query: 1266 NPFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMI--TGKDT--- 1430
                KL   P  E   K     +  Y  S++   +  I   EI S ++       DT   
Sbjct: 784  ---EKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLID--EIHSLLARFWWGSSDTNRK 838

Query: 1431 LTLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRL 1610
            +   +WD++C PK  GGL FR+    N+  +AK  W++C        +L++++Y +   L
Sbjct: 839  MHWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSEL 898

Query: 1611 LDLQK 1625
            L+ ++
Sbjct: 899  LEARR 903



 Score = 95.1 bits (235), Expect = 2e-16
 Identities = 121/550 (22%), Positives = 193/550 (35%), Gaps = 36/550 (6%)
 Frame = +2

Query: 1253 GWKQKSLSQAGRSTLIRTMLQTLPSHTKEVFLLPVSICNKLDKTVRDFFWGFND-NRKRH 1429
            GWK+K LS+ G+  LI+++ Q +P++   VF LP  + +++   +  F+WG +D NRK H
Sbjct: 781  GWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTNRKMH 840

Query: 1430 FNT*SLGLY------------------VCTKTFWRP*L*GI*G*Q*GICS--QTGVANLL 1549
            +++     Y                  +  K  WR            +C+  QT +  LL
Sbjct: 841  WHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWR------------LCTGDQTLLYRLL 888

Query: 1550 RQR*SMGTAGQIEVPKRFKTSRLAE--KPI*CIMDMSGIWETKDLIEKSACVKVGLYSTA 1723
            + R              FK+S L E  +          IW +K L+ +     VG     
Sbjct: 889  QAR-------------YFKSSELLEARRGYNPSFTWRSIWGSKSLLLEGLKWCVGSGERI 935

Query: 1724 HIWECPWIPDLEGFKXXXXXXXXXXXXLVLELIDRDLKTWNCSLVMQTFPIHIAQAILKI 1903
             +WE  WI                    V +LID     WN   V QTF     + +L I
Sbjct: 936  RVWEDAWILGEGAHMVPTPQADSNLDLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSI 995

Query: 1904 KIPPSQEHDSLVWTPXXXXXXXXXXXXLIETK---QRFAIQSGDNR-KL*KDLWSSSLHP 2071
             +      D   W P             +      + + +Q G+   +L + +W     P
Sbjct: 996  PLSRFLPDDHRYWWPSRNGIFSVRSCYWLGRLGPVRTWQLQHGERETELWRRVWQLQGPP 1055

Query: 2072 RHQQLLCKIIVNALPTKMRLKNFLPVESCLCPICXXXXXXXXXXFLKCPLTRAAWFNSPW 2251
            +    L +    +L  K RL +        C +C             C   RA W  S +
Sbjct: 1056 KLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARAIWQVSGF 1115

Query: 2252 -----NLKIEAFGH*NILRWISKLVNLSN*IAPNIEDRKEILNFAAVLMESIWLCRNNVD 2416
                 N  + +F     L W++K               KE        M + W CRN + 
Sbjct: 1116 ASLMMNAPLSSFSE--RLEWLAKHAT------------KEEFRTMCSFMWAGWFCRNKLI 1161

Query: 2417 HRKQM---PNWNEWISTIVRSSRRY*LASINRKKNHAGIRPNQIWKTPLPGWTKINYDVA 2587
               ++   P   +  S +V     Y  A    + +  G   + +W  P  G  K+N+D  
Sbjct: 1162 FENELSDAPLVAKRFSKLVADYCEY--AGSVFRGSGGGCGSSALWSPPPTGMFKVNFDAH 1219

Query: 2588 MEDTGLVYCAYVIREQDENFVEGGVKS-GYXXXXXXXXXXXXXXXMETIEAKGLHQTILE 2764
            +   G V    VIR  D      GVK                   +E     G  + +LE
Sbjct: 1220 LSPNGEVGLGVVIRANDGGIKMLGVKRVAARWTAVMAEAMAALFAVEVAHRLGFGRIVLE 1279

Query: 2765 GDSLNVVLAL 2794
            GD++ V+ A+
Sbjct: 1280 GDAMMVINAV 1289


>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
          Length = 992

 Score =  328 bits (842), Expect = 7e-87
 Identities = 189/534 (35%), Positives = 287/534 (53%), Gaps = 8/534 (1%)
 Frame = +3

Query: 63   WLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADENASLIAIPEAYSIKDVV 242
            W    + + ++   Y+ +LFTS+      ++ + +   +  D N  L+       I + V
Sbjct: 23   WREDEQGLQSVVLDYFTHLFTSSASGSEGEIIDAVESRVTPDMNNLLLTDYCDAEIHEAV 82

Query: 243  WSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLLKTFNHTFLALIPKTNI 422
            + M   K+PGPDG+ P F + YWHI+G  +  A++ F T   LL+  N T + LIPK   
Sbjct: 83   FQMYPTKAPGPDGMPPIFFQKYWHIVGSDVTRAIKDFLTSGRLLQKINFTHVVLIPKVKH 142

Query: 423  ANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFIPSRCMSDKIIISYEII 602
               M   +PI+LCN+++KI TK+LA+R++ +LD+I+SP Q+A I  R +SD  I++ EII
Sbjct: 143  PKDMSQLRPISLCNVLFKIATKVLANRLKLILDKIISPSQSALISGRLISDNTILAAEII 202

Query: 603  HHLNQKKRNLS-LMALKVDMAKAYDRVEWTLLTQILTKHGFSDHFVSLTLNCVSTPIFSL 779
            H+L +++R     MALK+DM+KAYDR+EW+ L  I+ K GF++ ++ L L C+ST  +S 
Sbjct: 203  HYLRRRRRGKKGFMALKMDMSKAYDRIEWSFLEAIMRKLGFAEQWIQLMLTCISTVSYSF 262

Query: 780  LINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAELGGSIQGVKICRQSPPIS 959
            +ING+  G+   S+GLRQGDP+SP LF    E L+ LI + E  G ++GV ICR +P IS
Sbjct: 263  VINGTPHGFLHPSRGLRQGDPLSPYLFLLCAEGLTALIAQKEREGFLKGVSICRGAPAIS 322

Query: 960  QLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVIHFSKNADYNLKAEILN 1139
             L FADD  +F  A + +   LK+IL+TY    GQ VNF KS + FSKN     +  +  
Sbjct: 323  HLFFADDSFLFAWANMADCMALKDILDTYERALGQQVNFQKSAVCFSKNVHRGDQLMLAQ 382

Query: 1140 ILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVE----KMKTVAGNKNPFHKLEDPP*LEQ 1307
             + I    H   YLG P      +  +FN + E    K++T  G      KL      E 
Sbjct: 383  FMGIPCVDHHSQYLGLPMVLDKKKGASFNHLKERLWKKLQTWKG------KLLSGAGKEI 436

Query: 1308 CYKHFPVTLRRYFYSLY---QFATNWIKLFEISSGVSMITGKDTLTLEAWDSMCAPKHSG 1478
              K     +  Y  S +   ++    +         +  T    +   AWD +CAPK  G
Sbjct: 437  LIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWWNSSTENKKIHWMAWDRLCAPKEEG 496

Query: 1479 GLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRLLDLQKSPYSA 1640
            GL FR     N   +AK GW++  + D    +++K+KY      L+   SPY++
Sbjct: 497  GLGFRNLHAFNLALLAKQGWRLLQNPDSLVTKVLKAKYFPTRSFLETTVSPYAS 550



 Score = 75.1 bits (183), Expect = 2e-10
 Identities = 128/576 (22%), Positives = 204/576 (35%), Gaps = 39/576 (6%)
 Frame = +2

Query: 1256 WKQKSLSQAGRSTLIRTMLQTLPSHTKEVFLLPVSICNKLDKTVRDFFWGFN-DNRKRHF 1432
            WK K LS AG+  LI+ + Q +P +T   FLLP  +C  L+K V  F+W  + +N+K H+
Sbjct: 424  WKGKLLSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWWNSSTENKKIHW 483

Query: 1433 ------------------NT*SLGLYVCTKTFWRP*L*GI*G*Q*GICSQTGVANLLRQR 1558
                              N  +  L +  K  WR                     LL+  
Sbjct: 484  MAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWR---------------------LLQNP 522

Query: 1559 *SMGTAGQIEVPKRFKTSRLAEKPI*CIMDM--SGIWETKDLIEKSACVKVGLYSTAHIW 1732
             S+ T  ++   K F T    E  +     +    + + + +I + +  +VG   T  IW
Sbjct: 523  DSLVT--KVLKAKYFPTRSFLETTVSPYASVVWKSLCDARTVIIQGSRWQVGSGDTIGIW 580

Query: 1733 ECPWIPDLEGFKXXXXXXXXXXXXLVLELIDRDLKTWNCSLVMQTFPIHIAQAILKIKIP 1912
            E  W+P    F+             V +LI  D + WN  L+   F       I  I + 
Sbjct: 581  EDRWLPQPNSFQIFSPRPEHSAITKVSDLIHGDSREWNAPLLQNVFFPEEVMLIRSIPLS 640

Query: 1913 PSQEHDSLVWTPXXXXXXXXXXXXLI------ETKQRFAIQSGDNRKL*KDLWSSSLHPR 2074
                 D LVW               +       T +  +  S    +    LW + +  R
Sbjct: 641  LRLTPDMLVWHYDKKGMFTVKSAYHVARSLHSSTGRASSSNSDAVARNWSLLWKAIVPAR 700

Query: 2075 HQQLLCKIIVNALPTKMRLKNFLPVESCLCPICXXXXXXXXXXFLKCPLTRAAWFNSPWN 2254
             +    ++I   LPTK  L          C +C             CP     W N   +
Sbjct: 701  VKTFWWRVISGILPTKANLARKKVSLDEECMLCEGPVKSLIHILRDCP-----WNNGAHS 755

Query: 2255 LKIEAFGH*NILRWISKLVNLSN*IAPNIEDRKEILNFAAVLME--SIWLCRNNV--DHR 2422
             K           W+ +             ++    +FA  LM   +IW  RN +  +++
Sbjct: 756  PK----------DWVCRCA-----------EQLSSQDFATFLMVGWAIWEARNGLLWNNK 794

Query: 2423 KQMPNWNEWISTIVRSSRRY*LASINRKKNHAGIRP-----NQIWKTPLPGWTKINYDVA 2587
            K     +E +S  + +S R  L    R  N  G +       Q+W+ P     KIN D A
Sbjct: 795  KSR---HEQVS--LHASLR--LHDFLRVSNCLGSQSRQGQIKQMWQPPHENSLKINVDGA 847

Query: 2588 ME-DTGLVYCAYVIREQDENFVEGGVKSGYXXXXXXXXXXXXXXXMETIEA--KGLHQTI 2758
             +  T       V+R+    FV  G  +                   TI A  +G    +
Sbjct: 848  WKPGTTEGGVGVVVRDSTGKFV-AGCATKLTNVFSAPQVEALAARTNTILAMERGYQNVV 906

Query: 2759 LEGDSLNVVLALNGNRYVEEWTGTAIIEEGKSLLSR 2866
             E D+L +V AL  N  ++      ++E+ KSLL++
Sbjct: 907  FESDALQIVTALR-NHSIDRSVIGPVVEDTKSLLTQ 941


>gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]
          Length = 1255

 Score =  290 bits (741), Expect(2) = 1e-85
 Identities = 186/589 (31%), Positives = 307/589 (52%), Gaps = 15/589 (2%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIA--PYIFAD 188
            +R  N I  I +    W++   D+ + F  Y+++LF S+ P+ PI +D  +A  P    D
Sbjct: 256  KRTQNRIKGIKNLHGHWVTLVSDVRSTFLSYFQHLFASSLPD-PIQIDRTLAVIPRTVTD 314

Query: 189  ENASLIAIP-EAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHD 365
               S++  P  A  +   + +MK   SPGPDGL P F++ YW  +GP  + AV +   H 
Sbjct: 315  SMRSVLERPYTAAEVWPAIRNMKPLSSPGPDGLPPLFYQKYWSTVGPATVRAVLHLLNHG 374

Query: 366  HLLKTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQA 545
             +    NH+F+ LIPK +   +  +++PI+L N++YKI +K++A+RI+ ++++I+S  QA
Sbjct: 375  SMESRMNHSFIVLIPKVSDPQEPAHYRPISLSNVVYKIASKMVATRIKPIMEKIISKEQA 434

Query: 546  AFIPSRCMSDKIIISYEIIHHLNQKKRNLSLM-ALKVDMAKAYDRVEWTLLTQILTKHGF 722
            AF+  R ++D I+++YE+ H +   +R      ALK+D++KA+DR+EWT L ++L  HGF
Sbjct: 435  AFLSGRSITDNILMAYELNHSIKTSRRGEPRYGALKLDVSKAFDRIEWTFLEKVLRCHGF 494

Query: 723  SDHFVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRA 902
                +   + CV+T  +S++ING   G  + ++G+RQGDP+SP LF    + LSRL+   
Sbjct: 495  PSSTIRTIMLCVTTVTYSVMINGVPEGNIIPTRGIRQGDPLSPYLFILCSDTLSRLLHAE 554

Query: 903  ELGGSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDK 1082
                S  G ++   +P IS L+FADD  IF  AT+   + +  +L++Y   SGQ +N +K
Sbjct: 555  CDRNSEIGFQLSPTTPKISHLLFADDTLIFSSATLAAMRGIDGVLSSYAAVSGQMINLEK 614

Query: 1083 SVIHFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM--KTVA 1256
            SV+      D      +   + +      G YLG P   G S+  AF  + +++  + + 
Sbjct: 615  SVLVIPSEPDAQYTHLLSEAVGVPLTETLGRYLGLPSMVGLSKKAAFRNLKDRIHSRILH 674

Query: 1257 GNKNPFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMI----TGK 1424
             +     K      ++   +  P       YS+  F      + E++  +S       GK
Sbjct: 675  WHTKFLSKAGKMVLIKSVLQAIPA------YSMQCFKLPASLIAELNGLLSSFWWDDRGK 728

Query: 1425 DTLTLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGL 1604
              + L AWD +C     GGL FR     N+  +AK  W+I +  D    QL+K KY R  
Sbjct: 729  PKMHLLAWDKLCRATVHGGLGFRNLAIFNKALLAKQCWRILMKPDSLLAQLLKGKYYRNT 788

Query: 1605 RLL--DLQKSPYSASWICQVFGRQRT*LKKVPVLRW---DFTQLHIFGN 1736
              L   L +SP S +W   +  R+      V  LRW   D +Q++I+ +
Sbjct: 789  SFLCASLGRSP-SFTWRSLLTARELL----VSGLRWCPGDGSQINIWSS 832



 Score = 57.4 bits (137), Expect(2) = 1e-85
 Identities = 84/391 (21%), Positives = 129/391 (32%), Gaps = 28/391 (7%)
 Frame = +2

Query: 1715 STAHIWECPWIPDLEGFKXXXXXXXXXXXXLVLELIDRDLKTWNCSLVMQTFPIHIAQAI 1894
            S  +IW  PW+P +  FK             V +LI+   + WN SL+   F    A +I
Sbjct: 825  SQINIWSSPWLPRMGFFKPIYKRPELPPTLRVSDLINPGTRDWNRSLIRHLFLPIDASSI 884

Query: 1895 LKIKIPPSQEHDSLVWTPXXXXXXXXXXXXLIETKQRFAIQSGDNR-------------- 2032
            L I +   +  D L+W                     ++++SG  R              
Sbjct: 885  LSIPLGTGRHPDRLIWH--------------FSKDGAYSVKSGYKRAWSTEHLRCPGPAH 930

Query: 2033 ------KL*KDLWSSSLHPRHQQLLCKIIVNALPTKMRLKNFLPVESCLCPICXXXXXXX 2194
                     K LW  +L P+      ++  N LPTK  L+         C +C       
Sbjct: 931  SSDTFSAFWKQLWRIALPPKILLFAWRLCRNILPTKALLRRRNVCRDSQCEVCDQEEENW 990

Query: 2195 XXXFLKCPLTRAAWFN--SPWNLKIEAFGH*NILRWISKLVNLSN*IAPNIEDRKEILNF 2368
                   P  +  W N   PW L   +    + L W+          A    D +++L  
Sbjct: 991  HHAIATYPWAKLVWSNIHLPWALLSASLS--DPLIWVHHCFR-----ALTASDFRKML-- 1041

Query: 2369 AAVLMESIWLCRNNVDHRKQMPNWNEWISTIVRSSRRY*LASINRKKNHAGIRPN----- 2533
              +   +IW  RN V    + P+    + + V     Y   S           P+     
Sbjct: 1042 --IGCWAIWSKRNEVRLFARSPD----VMSTVAFINTYLATSTTAFDPEPQPLPHSPTVT 1095

Query: 2534 QIWKTPLPGWTKINYDVAMEDTGLVYCAYVIREQDENFVEGGVKSGY-XXXXXXXXXXXX 2710
            + W+ P  G  K+N D        V CA +IR+     V    K+ +             
Sbjct: 1096 RRWEAPAHGTFKVNVDSGRAGNHTV-CAGIIRDDRGKCVGWFSKTSFPPLDPEHGEYLAA 1154

Query: 2711 XXXMETIEAKGLHQTILEGDSLNVVLALNGN 2803
               +E     GL    LE D L +V A+N N
Sbjct: 1155 KSGLEFARFLGLQAVTLESDCLTLVSAVNEN 1185


>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
          Length = 1496

 Score =  324 bits (831), Expect = 1e-85
 Identities = 186/583 (31%), Positives = 310/583 (53%), Gaps = 2/583 (0%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADEN 194
            +RR N I+ +      W ++ + +      Y+++LF+ST  +   ++ + +   +  + N
Sbjct: 725  RRRRNTISALEDEHGHWQTTEQGLTQTVVNYFQHLFSSTGSSEYTEVVDGVRGRVTEEMN 784

Query: 195  ASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLL 374
             +L+A+     IK  ++ M   K+PGPDG  P F++ YW I+G  ++ AV +FF    LL
Sbjct: 785  QALLAVFTPEEIKIALFQMHPSKAPGPDGFSPFFYQKYWPIVGEDVVAAVLHFFKTGKLL 844

Query: 375  KTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFI 554
            K  N T +ALIPK +    M   +PI+LCN++YKI  K+L +R++++L  ++S  Q+AF+
Sbjct: 845  KRINFTHVALIPKVHEPKNMMQLRPISLCNVLYKIGAKVLTTRLKAILPTLISDTQSAFV 904

Query: 555  PSRCMSDKIIISYEIIHHLNQKKRNLS-LMALKVDMAKAYDRVEWTLLTQILTKHGFSDH 731
            P R +SD  I+++E++H +++K +     +ALK+DM+KAYDRVEW+ L  ++   GF+  
Sbjct: 905  PGRAISDNSIVAFELLHMMHKKNQGRQGYLALKIDMSKAYDRVEWSFLEALMKGMGFAPR 964

Query: 732  FVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAELG 911
            ++ L + CV+T  +S ++NG+  GY +  +GLRQGDP+SP LF    E LS LI +AE  
Sbjct: 965  WIQLIMECVTTVSYSFMLNGNPVGYVIPQRGLRQGDPLSPYLFLLCAEALSSLILQAERR 1024

Query: 912  GSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVI 1091
              + GV +CR +P +S L FADD  +F RA  Q+ ++L  I   Y M SGQ ++ +KS +
Sbjct: 1025 NLLHGVNLCRGAPSVSHLFFADDSFLFLRADQQDCEQLSIIFQKYEMVSGQKIHLEKSCV 1084

Query: 1092 HFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM-KTVAGNKN 1268
             FS N D   +  +  +L +       +YLG P + G SR Q FN + E++ K + G K 
Sbjct: 1085 SFSINMDRTDQDNLAAVLGVRRVDQHDVYLGLPTHVGRSRRQCFNSLKERIWKKIQGWKA 1144

Query: 1269 PFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMITGKDTLTLEAW 1448
                      L +             + + +   N I+            G+  +   +W
Sbjct: 1145 KLLSFAGKEILLKVVAQAVPIYMMNCFLIPKCLCNEIQQVMARYWWVEQDGQRKIHWLSW 1204

Query: 1449 DSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRLLDLQKS 1628
            + +C PK  GGL FR     N   +AK  W++    +     ++K++Y +   +L+ Q  
Sbjct: 1205 NKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVACILKARYFKNCSILEAQIG 1264

Query: 1629 PYSASWICQVFGRQRT*LKKVPVLRWDFTQLHIFGNARGYQIW 1757
             +S S+I Q   + R  ++K    RW        GN    +IW
Sbjct: 1265 -HSPSYIWQSLCKARVLIEKGS--RWR------IGNGHSVRIW 1298


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1229

 Score =  306 bits (785), Expect(2) = 5e-83
 Identities = 183/543 (33%), Positives = 295/543 (54%), Gaps = 14/543 (2%)
 Frame = +3

Query: 84   IGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADENASLIAIPEAYSIKDVVWSMKVGK 263
            I  I   Y++ +FTS +      +D  I P +   +N  L  IP    +KD V+S+   K
Sbjct: 280  ISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEVKDAVFSINASK 339

Query: 264  SPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLLKTFNHTFLALIPKTNIANKMDNF 443
            +PGPDG    F+ +YWHII   +   ++ FFT  +  +  N T + LIPK     K+ ++
Sbjct: 340  APGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKDLGPRKVADY 399

Query: 444  KPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFIPSRCMSDKIIISYEIIHHL--NQ 617
            +PIALCNI YKI+ KI+  R++ +L +++S  Q+AF+P R +SD ++I++E++H L  + 
Sbjct: 400  RPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLITHEVLHFLRTSS 459

Query: 618  KKRNLSLMALKVDMAKAYDRVEWTLLTQILTKHGFSDHFVSLTLNCVSTPIFSLLINGSV 797
             K++ S MA+K DM+KAYDRVEW  L ++L + GF   ++   L CV++  +S LING+ 
Sbjct: 460  AKKHCS-MAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTP 518

Query: 798  FGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAELGGSIQGVKICRQSPPISQLMFAD 977
             G  + ++GLRQGDP+SP LF    E+LS L TRA+    + GV++    P ++ L+FAD
Sbjct: 519  QGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSINGPRVNHLLFAD 578

Query: 978  DLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVIHFSKNADYNLKAEILNILDIGE 1157
            D   F ++  +   +L EIL+ Y   SGQS+NF KS + FS     ++K ++  IL I +
Sbjct: 579  DTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRK 638

Query: 1158 CSHKGLYLGAPFYKGPSRNQAFNGIVEKMKTVAGN-KNPFHKLEDPP*LEQCYKHFPVTL 1334
                G YLG P + G  +   F  I++K++  + +  + F        L Q  K   V L
Sbjct: 639  EGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRF--------LSQAGKQ--VML 688

Query: 1335 RRYFYSLYQFATNWIKL-----FEISSGVSMI---TGKDT--LTLEAWDSMCAPKHSGGL 1484
            +    S+  ++ +  KL      +I S ++     T  D    +  AW  +  PK++GGL
Sbjct: 689  KAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGGL 748

Query: 1485 SFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRLLDLQ-KSPYSASWICQVF 1661
             FR+    N   +AKLGW++    +    +++  KY      ++ +  S  S  W   + 
Sbjct: 749  GFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMECKLPSQPSHGWRSIIA 808

Query: 1662 GRQ 1670
            GR+
Sbjct: 809  GRE 811



 Score = 31.6 bits (70), Expect(2) = 5e-83
 Identities = 36/175 (20%), Positives = 59/175 (33%), Gaps = 1/175 (0%)
 Frame = +2

Query: 1727 IWECPWIPDLEGFKXXXXXXXXXXXXLVLELIDRDLKTWNCSLVMQTFPIHIAQAILKIK 1906
            IW  PW+   +                V  LI+++   W+ + +    P +    I ++ 
Sbjct: 829  IWNDPWLSISKPLVPIGPALREHQDLRVSALINQNTLQWDWNKIAVILP-NYENLIKQLP 887

Query: 1907 IPPSQEHDSLVWTPXXXXXXXXXXXXLIETKQRFAI-QSGDNRKL*KDLWSSSLHPRHQQ 2083
             P S+  D L W P             I +     I Q+  N +   +LW     P+ + 
Sbjct: 888  APSSRGVDKLAWLPVKSGQYTSRSGYGIASVASIPIPQTQFNWQ--SNLWKLQTLPKIKH 945

Query: 2084 LLCKIIVNALPTKMRLKNFLPVESCLCPICXXXXXXXXXXFLKCPLTRAAWFNSP 2248
            L+ K  + ALP  ++L       S  C  C          F  C      W  +P
Sbjct: 946  LMWKAAMEALPVGIQLVRRHISPSAACHRC-GAPESTTHLFFHCEFAAQVWELAP 999


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score =  292 bits (748), Expect(2) = 1e-81
 Identities = 179/558 (32%), Positives = 297/558 (53%), Gaps = 6/558 (1%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNP-NFPIDLDNLIAPYIFADE 191
            +R  N +++++  +    +   D G I   +++NLFTST        L+ L A  + ++ 
Sbjct: 361  ERLKNELSFLLDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAK-VTSEM 419

Query: 192  NASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHL 371
            N +LI       + + V+S+    +PGPDG    F + +W ++  +I+  +  FF    L
Sbjct: 420  NHNLIQEVTELEVYNAVFSINKESAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVL 479

Query: 372  LKTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAF 551
             + +NHT + LIPK     +M + +PI+LC+++YKII+KIL  R++  L  IVS  Q+AF
Sbjct: 480  PQDWNHTHICLIPKITSPQRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAF 539

Query: 552  IPSRCMSDKIIISYEIIHHLNQKKR-NLSLMALKVDMAKAYDRVEWTLLTQILTKHGFSD 728
            +P R +SD I++++E+IH L    R +   MA K DM+KAYDRVEW  L  ++T  GF++
Sbjct: 540  VPQRLISDNILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNN 599

Query: 729  HFVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAEL 908
             ++S  +NCV++  +S+LING  +G+ + ++G+RQGDP+SPALF    E L  ++ +AE 
Sbjct: 600  KWISWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQ 659

Query: 909  GGSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSV 1088
             G I G++   +   ++ L+FADD  +  +AT QE +EL + L+ Y   SGQ +N +KS 
Sbjct: 660  AGKITGIQFQDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSA 719

Query: 1089 IHFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKMKTVAGNKN 1268
            I F KN D  +K  I +   I      G YLG P     S+   F  I EK+++      
Sbjct: 720  ITFGKNVDIQIKDWIKSRSGISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSRL--TG 777

Query: 1269 PFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWI-KLFEISSGV--SMITGKDTLTL 1439
             + K       E   K   + L  Y  S ++   N   KL  +      + +  K  +  
Sbjct: 778  WYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHW 837

Query: 1440 EAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRLLDL 1619
             +W  +  PK  GG  F++ +  N+  +AK  W++  +K   + ++ +S+Y      L  
Sbjct: 838  LSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSA 897

Query: 1620 QK-SPYSASWICQVFGRQ 1670
             + S  S +W   +FGR+
Sbjct: 898  TRGSRPSYAWRSILFGRE 915



 Score = 41.2 bits (95), Expect(2) = 1e-81
 Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 6/195 (3%)
 Frame = +2

Query: 1670 KDLIEKSACVKVGLYSTAHIWECPWIPDLEGFKXXXXXXXXXXXXLVLELIDRDLKTWNC 1849
            ++L+ +     +G      +W   W+ D    +             V +LID   + WN 
Sbjct: 914  RELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVDLKVSQLIDPTSRNWNL 973

Query: 1850 SLVMQTFPIHIAQAILKIKIPPSQEHDSLVWTPXXXXXXXXXXXXLIETKQ------RFA 2011
            +++   FP    + ILK + P   + DS  W                 +KQ      + A
Sbjct: 974  NMLRDLFPWKDVEIILKQR-PLFFKEDSFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEA 1032

Query: 2012 IQSGDNRKL*KDLWSSSLHPRHQQLLCKIIVNALPTKMRLKNFLPVESCLCPICXXXXXX 2191
                    L   +W+    P+ +  L K +  A+P + RL+         C +C      
Sbjct: 1033 KVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENET 1092

Query: 2192 XXXXFLKCPLTRAAW 2236
                  +CPL R  W
Sbjct: 1093 INHILFECPLARQVW 1107


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score =  311 bits (796), Expect = 1e-81
 Identities = 191/561 (34%), Positives = 297/561 (52%), Gaps = 9/561 (1%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNL--IAPYIFAD 188
            +RR N I  I +S   W   + ++   F  Y++NLFT+++PN     D L  I+P +  +
Sbjct: 338  RRRKNKIWGIENSHGQWTEDQREVEKEFCEYFQNLFTTSSPNQSQIQDALDGISPKVTTN 397

Query: 189  ENASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDH 368
             N  L        I + +  M   K+PGPDGL   F + +W  +   +I    +      
Sbjct: 398  MNHQLEEPFTEEEIVEALHQMSPTKAPGPDGLPAAFFQKHWQTVRSSVIGTCMHILNEGG 457

Query: 369  LLKTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAA 548
             L   NHTF+ALIPKT    K+  F+PI+LCN+IY+I+ K +A+R++ +L +I+SP Q+A
Sbjct: 458  NLSALNHTFIALIPKTTKPKKVTEFRPISLCNVIYRIVAKTIANRLKPILSQIISPTQSA 517

Query: 549  FIPSRCMSDKIIISYEIIHHLNQKK-RNLSLMALKVDMAKAYDRVEWTLLTQILTKHGFS 725
            FIP+R +SD +II YE +H +   + +   L+ALK+D++KAYDRVEWT L Q + K GFS
Sbjct: 518  FIPNRLISDNVIIGYECLHKIRHSQGKKKGLVALKLDISKAYDRVEWTFLKQTMKKLGFS 577

Query: 726  DHFVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAE 905
              ++ L + C+++  FS++ING+  G+F   +GLRQG P+SP LF    E+ S L+ +AE
Sbjct: 578  RKWLELIMGCITSVSFSVIINGTPKGFFHPERGLRQGCPLSPYLFIICTEVFSSLLLQAE 637

Query: 906  LGGSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKS 1085
                I G++   +   IS L+FADD  +F  A++ E K LK I + Y   SGQ  NF+KS
Sbjct: 638  TKKRISGLRFA-EDVTISHLLFADDSLVFSTASVAECKHLKGIFDRYAKASGQIFNFEKS 696

Query: 1086 VIHFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKMKTVAGNK 1265
             + F        KA I NI ++   S    YLG P   G  +   F  +  K++ ++   
Sbjct: 697  SMFFGGKIPEEQKAAIRNIFNLNVVSKYEKYLGLPSMIGRKKTSFFREV--KLRVLSKIN 754

Query: 1266 NPFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMI-----TGKDT 1430
            N  HK+      E   K     +  Y  S+++      +  EI S ++         K  
Sbjct: 755  NWQHKMFSSGGKEILIKAVAQAVPAYAMSVFKLPKGLCE--EIQSEIAKFWWGSKKDKRG 812

Query: 1431 LTLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRL 1610
            +    WD +   K  GGL FR+F   N+  VAK GW++    +    ++++++Y +    
Sbjct: 813  IHWARWDKLSCAKSRGGLGFRDFISFNQAMVAKQGWRLIQFPNSLVSKVLRARYFKSCSF 872

Query: 1611 LDLQK-SPYSASWICQVFGRQ 1670
            LD +  S  S  W   ++GRQ
Sbjct: 873  LDAKPGSNPSFIWRSILWGRQ 893



 Score = 81.6 bits (200), Expect = 2e-12
 Identities = 109/485 (22%), Positives = 192/485 (39%), Gaps = 15/485 (3%)
 Frame = +2

Query: 1256 WKQKSLSQAGRSTLIRTMLQTLPSHTKEVFLLPVSICNKLDKTVRDFFWGFNDNRKRHFN 1435
            W+ K  S  G+  LI+ + Q +P++   VF LP  +C ++   +  F+WG   + KR  +
Sbjct: 756  WQHKMFSSGGKEILIKAVAQAVPAYAMSVFKLPKGLCEEIQSEIAKFWWGSKKD-KRGIH 814

Query: 1436 T*SLGLYVCTKTFWRP*L*GI*G*Q*GICSQTGVANLLRQR*SMGTAGQIEVPKRFKT-S 1612
                    C K+               + ++ G   L++   S+    ++   + FK+ S
Sbjct: 815  WARWDKLSCAKSRGGLGFRDFISFNQAMVAKQGW-RLIQFPNSL--VSKVLRARYFKSCS 871

Query: 1613 RLAEKPI*CIMDMSGIWET----KDLIEKSACVKVGLYSTAHIWECPWIPDLEGFKXXXX 1780
             L  KP     + S IW +    + +I+K A  ++G  S   +++  WIP  + FK    
Sbjct: 872  FLDAKPG---SNPSFIWRSILWGRQVIQKGARWRIGNGSNILVYKDNWIPRPDTFKPISP 928

Query: 1781 XXXXXXXXLVLELIDRDLKTWNCSLVMQTFPIHIAQAILKIKIPPSQEHDSLVWTPXXXX 1960
                     V EL+D D   WN + + Q F     +AILKI +P SQ+ D ++W      
Sbjct: 929  PTLPIDTT-VGELMD-DENNWNVAKLNQHFMQEDTEAILKIPLPRSQKVDEMMWHYDKHG 986

Query: 1961 XXXXXXXXLIETKQRFAIQ---SGDNRKL*KDLWSSSLHPRHQQLLCKIIVNALPTKMRL 2131
                     I  K +   +   SG N K  K +WS  L  + +  + +   N LPT   L
Sbjct: 987  EYSVKSGYQIALKLKAPDEPSNSGSNSKRWKAVWSMELPEKMKIFMWRAARNLLPTAENL 1046

Query: 2132 KNFLPVESCLCPICXXXXXXXXXXFLKCPLTRAAWFNSPWNLKIEAFGH*NILRWISKLV 2311
                 ++  +C  C           L C   R  W+++  +++I    + +IL +I ++ 
Sbjct: 1047 WKRKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQISNAQNQDILEFIYEVW 1106

Query: 2312 NLSN*IAPNIEDRKEILNFAAVLMESIWLCRNN--VDHRKQMPNWN----EWISTIVRSS 2473
            +            K           +IW  RN    + +K  P  +    E +      +
Sbjct: 1107 STWG---------KTKAEQTIAFCWAIWFARNKRIFEGKKSDPRASAAKAESLLEAYHRA 1157

Query: 2474 RRY*LASINRKKNHAGIRPNQIWKTPLPGWTKINYDVAMEDTGLVY-CAYVIREQDENFV 2650
            R+   + I+  K        + W+ P   + K+N D A+ +   V     VI++     V
Sbjct: 1158 RKPDASHIHNVKRIV----QKKWEPPPGNFLKVNVDAAINNRDQVAGLGAVIKDPSGKIV 1213

Query: 2651 EGGVK 2665
              G K
Sbjct: 1214 AAGTK 1218


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  309 bits (792), Expect = 4e-81
 Identities = 204/569 (35%), Positives = 295/569 (51%), Gaps = 17/569 (2%)
 Frame = +3

Query: 102  LYYKNLFTSTNP--NFPIDLD-NLIAPYIFADENASLIAIPEAYSIKDVVWSMKVGKSPG 272
            L +K  F S NP   F  ++D NL++P +   +NA L +      IK+ V+ +   KSPG
Sbjct: 405  LAFKKRFIS-NPACKFNQNVDFNLLSPIVSEADNAYLTSAVSPEEIKNAVFDLAPDKSPG 463

Query: 273  PDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLLKTFNHTFLALIPKTNIANKMDNFKPI 452
            PDG  P F + YW +IG  +  AVQ FF   ++LK  NHTFLALIPK +     ++F+PI
Sbjct: 464  PDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPI 523

Query: 453  ALCNIIYKIITKILASRIRSLLDRIVSPFQAAFIPSRCMSDKIIISYEIIHHLNQKKRNL 632
            +LC+ IYK+I+KI+ +R++  L +I+ P Q AFIP R + D I+I++E+ H    K    
Sbjct: 524  SLCSTIYKVISKIITNRLKITLGKIIHPLQGAFIPERLIQDNILIAHEVFHSFKNKTGRG 583

Query: 633  SLMALKVDMAKAYDRVEWTLLTQILTKHGFSDHFVSLTLNCVSTPIFSLLINGSVFGYFL 812
              +A+K+DM KAYDR+EW  +   + K GFS  ++    +C+S+  FS+L+NG     F 
Sbjct: 584  GWIAIKLDMEKAYDRLEWKYIYTTMDKMGFSPIWIEWIRSCISSASFSVLVNGIPGERFF 643

Query: 813  ASKGLRQGDPMSPALFTTYFELLSRLITRA-ELGGSIQGVKICRQSPPISQLMFADDLSI 989
             S+G+RQGDP+SP LF    ELL+R  ++A    G + GV I R    I  L FADD  I
Sbjct: 644  PSRGIRQGDPLSPYLFILCAELLAREFSKACHEPGKLIGVPIGRTRTRIPFLTFADDTMI 703

Query: 990  FRRATIQEAKELKEILNTYCMWSGQSVNFDKSVIHFSKNADYNLKAEILNILDIGECSHK 1169
            F +AT     ++++IL+ YC+ SGQ VN+ KS    S N     K    +IL + E S  
Sbjct: 704  FAKATEASCHKIRQILDKYCLMSGQLVNYHKSAFQCSPNVRDIDKVNFASILGMQESSEL 763

Query: 1170 GLYLGAPFYKGPSRNQAFNGIVEKMKTVAGNKNPFHKLEDPP*LEQCYKHFPVTLRRYFY 1349
            G YLG P        + F G++   KTV   + P  K      L Q  +   +       
Sbjct: 764  GDYLGCPIINSRVTKETFAGVIS--KTV--QQLPKWKANS---LSQAGRTVLIQ-----S 811

Query: 1350 SLYQFATNWIKLFEISSGV---------SMITGKDTLTLEA----WDSMCAPKHSGGLSF 1490
            +L   A+  ++ F +   V         +    KD     A    W+ +C PK  GG+ F
Sbjct: 812  NLASKASFQMQSFTLPKKVLTTLDTTYRNFFWNKDPAAKSANFIGWNKICQPKSVGGVGF 871

Query: 1491 REFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRLLDLQKSPYSASWICQVFGRQ 1670
            R+    N     KL W+I + KD  WV+LV  KYL+   LL + K P +ASW  +   R 
Sbjct: 872  RKAEVTNIALQMKLLWKIMVSKDNIWVKLVTQKYLKEQNLL-VCKIPSNASWQWKNLLRH 930

Query: 1671 RT*LKKVPVLRWDFTQLHIFGNARGYQIW 1757
            R    K   LRW      + G+ +    W
Sbjct: 931  RNFFSK--GLRW------LIGDGQDISFW 951


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  308 bits (788), Expect = 1e-80
 Identities = 177/559 (31%), Positives = 296/559 (52%), Gaps = 11/559 (1%)
 Frame = +3

Query: 3    TTVVQRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFT--STNPNFPIDLDNLIAPY 176
            +TV++R  N I+ + ++D  W+S+  ++  +   Y+K+LF+  S   NF   L     P 
Sbjct: 364  STVIRRSRNRIDMLQNNDGEWISNPMEVKAMVLGYWKHLFSEDSVQSNF-CHLPRDFFPQ 422

Query: 177  IFADENASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFF 356
            I AD+   ++       +   + SMK  K+PGPDG  P F++ +W ++ P ++  V    
Sbjct: 423  ITADDFEKMMRPLSEVEVTLALKSMKPFKAPGPDGFQPLFYQRFWDLVKPNVMHLVSEIL 482

Query: 357  THDHLLKTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSP 536
            +     + FN TF+ LIPK +I     +F+PI LCNI+YKI+TK++ +R++ +L  ++SP
Sbjct: 483  SGRDFPEGFNDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISP 542

Query: 537  FQAAFIPSRCMSDKIIISYEIIHHLNQKKRNLSLMALKVDMAKAYDRVEWTLLTQILTKH 716
             Q +F+P+R ++D +II  E+ H +  K+     MA+K+D  KAYDR+ WT + + L + 
Sbjct: 543  TQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKGFMAVKIDFEKAYDRLRWTFIRESLMEL 602

Query: 717  GFSDHFVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLIT 896
                H V + +NCVS+    +L NG        ++GLRQGDP+SP L+    E L+ LI 
Sbjct: 603  RIPQHLVDIVMNCVSSANLQILWNGEPMEKICPTRGLRQGDPLSPYLYVICMERLAHLID 662

Query: 897  RAELGGSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNF 1076
            +    G+ + VK  R  PPIS L FADDL +F  A++++A+ +K  L+ +C  SG  VN 
Sbjct: 663  QEVTNGNWKPVKASRNGPPISNLAFADDLILFSEASVEQAQVMKWCLDRFCEASGSKVNE 722

Query: 1077 DKSVIHFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKMK-TV 1253
            DKS I+FS N   +++  + N L +   +  G YLG P   G S  + +  +V+++   +
Sbjct: 723  DKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPTINGRSSKREYQYLVDRINGKL 782

Query: 1254 AGNKNPFHKLEDPP*L-EQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMI----- 1415
            AG K     +     L +  +   P      +Y++           +I            
Sbjct: 783  AGWKTKTLSIAGRATLIQSAFSSIP------YYTMQSTKLPRSTCDDIDRKSRSFLWGEQ 836

Query: 1416 TGKDTLTLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYL 1595
             GK  + L AW+++   K  GGL  R  R  N  F+ KLGW++  +    W +++++KY 
Sbjct: 837  EGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFLVKLGWRLLAEPSSLWSRILRAKYC 896

Query: 1596 RGLRLLDL--QKSPYSASW 1646
                 +D+  +KS  S++W
Sbjct: 897  DNRCDIDMFKEKSNASSTW 915


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score =  307 bits (786), Expect = 2e-80
 Identities = 176/531 (33%), Positives = 285/531 (53%), Gaps = 5/531 (0%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADEN 194
            +RR N I  +  S+  W +SR+ I +I   Y+ +LF S+  +   ++ + + P + AD  
Sbjct: 780  RRRRNIIKGLEDSNGCWRTSRQGITSIVIDYFGDLFRSSGSSMMEEILSALEPKVTADMQ 839

Query: 195  ASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLL 374
              LIA      IKD V+ M+  K+PGPDGL P F++ YW I+G  ++ AV+ F   + +L
Sbjct: 840  QVLIADFSYQEIKDAVFQMQPSKAPGPDGLPPLFYQKYWRIVGDDVVAAVRAFLQSNEML 899

Query: 375  KTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFI 554
            +  NHTF+ LIPK      M   +PI+LCN++Y+I  K LA+R++ ++  ++S  Q+AF+
Sbjct: 900  RQLNHTFVTLIPKVKEPRTMAQLRPISLCNVLYRIGAKTLANRMKFVMQSVISESQSAFV 959

Query: 555  PSRCMSDKIIISYEIIHHLNQKKR-NLSLMALKVDMAKAYDRVEWTLLTQILTKHGFSDH 731
            P R ++D  I+++EI H L Q++R     +ALK+DM+KAYDRVEW  L +++   GF   
Sbjct: 960  PGRLITDNSIVAFEIAHFLKQRRRGRKGSLALKLDMSKAYDRVEWEFLEKMMLAMGFPIL 1019

Query: 732  FVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAELG 911
            +V + ++CV+T  +S L+NG        ++GLRQGDP+SP LF    E  + L+++AE  
Sbjct: 1020 WVRMVMDCVTTVSYSFLVNGEPTRILYPTRGLRQGDPLSPYLFLLCAEGFTTLLSKAERQ 1079

Query: 912  GSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVI 1091
            G +QG+ ICR +P +S L FADD  +F +AT      LK I   Y   SGQ +N  KS +
Sbjct: 1080 GQLQGIVICRGAPTVSHLFFADDSFVFAKATDNNCGVLKHIFEVYEHASGQQINCQKSCV 1139

Query: 1092 HFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM-KTVAGNKN 1268
             FS N   + ++ + ++L +        YLG P   G ++   F  + E++ K + G + 
Sbjct: 1140 AFSANIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTVCFRYLKERVWKKLQGWRE 1199

Query: 1269 PFHKLEDPP*LEQCYKHFPVTLRRYFYSLY---QFATNWIKLFEISSGVSMITGKDTLTL 1439
                +      E   K    ++  Y  S +   Q   + I+                +  
Sbjct: 1200 QTLSIAGK---EVLLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWWGQQGENRKIHW 1256

Query: 1440 EAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKY 1592
              W+ +C  K  GG+ FR  +  N   +AK GW++  +      +L+K+KY
Sbjct: 1257 MRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKY 1307



 Score = 62.8 bits (151), Expect = 9e-07
 Identities = 73/352 (20%), Positives = 137/352 (38%), Gaps = 24/352 (6%)
 Frame = +2

Query: 1253 GWKQKSLSQAGRSTLIRTMLQTLPSHTKEVFLLPVSICNKLDKTVRDFFWGFN-DNRKRH 1429
            GW++++LS AG+  L++ + Q++P +    FLLP  +C+++++ +  F+WG   +NRK H
Sbjct: 1196 GWREQTLSIAGKEVLLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWWGQQGENRKIH 1255

Query: 1430 FNT*SLGLYVCTKTFWRP*L*GI*G*Q*GICSQT-GVANLLRQR*SM-----GTAGQIEV 1591
            +          T+           G     C Q   +A L +Q   +       A ++  
Sbjct: 1256 WMRWERLCKAKTE-----------GGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLK 1304

Query: 1592 PKRFKTSRLAEKPI*----CIMDMSGIWETKDLIEKSACVKVGLYSTAHIWECPWIPDLE 1759
             K F  +   E  +     C+     IW  + ++E  +  ++G   +  IW   W+P   
Sbjct: 1305 AKYFPQTNFWEATLGSRPSCVW--KSIWTARKVLEMGSRFQIGDGKSVRIWGDKWVPRPA 1362

Query: 1760 GFKXXXXXXXXXXXXLVLELI------DRDLKTWNCSLVMQTFPIHIAQAILKIKIPPSQ 1921
             F              V ELI        DL+  N +L +    + I +  L I+ PP  
Sbjct: 1363 TFAVITSPLDGMENTKVSELICNEGSPQWDLQKLN-NLFLPVDVVDIVRIPLSIRAPP-- 1419

Query: 1922 EHDSLVWTPXXXXXXXXXXXXLIETK------QRFAIQSGDNRKL*KDLWSSSLHPRHQQ 2083
              D +VW               +  +         +  + D   L + +W++++  + + 
Sbjct: 1420 --DRIVWNYDKHGLFTVKSAYRVALRVTSGDEDESSSSNSDTGMLWRHIWNATVPTKLKI 1477

Query: 2084 LLCKIIVNALPTKMRL-KNFLPVESCLCPICXXXXXXXXXXFLKCPLTRAAW 2236
               ++  + LPTK  L K  + ++  +C  C             CP   A W
Sbjct: 1478 FAWRVAHDILPTKANLIKKGVDMQD-MCMFCGDITESALHVLAMCPFAVATW 1528


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  306 bits (783), Expect = 5e-80
 Identities = 192/564 (34%), Positives = 294/564 (52%), Gaps = 9/564 (1%)
 Frame = +3

Query: 6    TVVQR-RYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIF 182
            T  QR R N I  I+  D+ W S   DIG +F  Y++NLFT+   +    +   +   + 
Sbjct: 646  TAKQRGRSNRICGILGEDNRWRSDVTDIGCVFVSYFRNLFTAGGGSMDETIFEAVTSRVD 705

Query: 183  ADENASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTH 362
            A    SL  +     I+  +  M   KSPG DG+   F + +W+IIG  +++    F   
Sbjct: 706  ATSKKSLDQVYRREEIELALKDMNPSKSPGSDGMPARFFQKFWNIIGNDVVDVCLRFLNG 765

Query: 363  DHLLKTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQ 542
            D  +  FNH+ +ALIPK     K+  ++PI+LCN++YK+++K+LA+R++S+L  +++  Q
Sbjct: 766  DGSIADFNHSLIALIPKVQNPKKVTEYRPISLCNVVYKLVSKVLANRLKSVLPEVIAENQ 825

Query: 543  AAFIPSRCMSDKIIISYEIIHHLNQK-KRNLSLMALKVDMAKAYDRVEWTLLTQILTKHG 719
            +AF+  R + D II ++EIIH L ++ K +   +ALK+DM KAYDRVEW  L +++   G
Sbjct: 826  SAFMSQRIIHDNIIAAFEIIHCLKRRGKDSRQKIALKLDMTKAYDRVEWGFLQRMMEVMG 885

Query: 720  FSDHFVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITR 899
            F D FV L ++CV +  +S+L+ G+ FG    S+GLRQGDP+SP LF    E LS LI +
Sbjct: 886  FPDRFVFLIMDCVKSVTYSVLLQGAPFGKIKPSRGLRQGDPISPYLFLIVAEGLSALIRK 945

Query: 900  AELGGSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFD 1079
            AE    I GV I R +P +S L +ADD  +F  AT+ +   LK I +TY   SGQ +N D
Sbjct: 946  AEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKD 1005

Query: 1080 KSVIHFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM-KTVA 1256
            KS I FS  +   +K     ILD+        YLG P   G  + + F  + +++   V 
Sbjct: 1006 KSAICFSPKSPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKKKLFQSLPDRVWNRVH 1065

Query: 1257 GNKNPFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMI----TGK 1424
            G +    KL      E   K     +  Y  S++Q          I+  V+       G 
Sbjct: 1066 GWEG---KLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSD--AINKCVARFWWGKEGG 1120

Query: 1425 DTLTLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYL--R 1598
              +    W  +C  K  GGL FR+    N+  + K GW++ +  D    +++K+KY    
Sbjct: 1121 KGIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWD 1180

Query: 1599 GLRLLDLQKSPYSASWICQVFGRQ 1670
                 +L  SP S  W   ++GR+
Sbjct: 1181 DFMEAELGSSP-SYLWRSFLWGRE 1203


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  301 bits (770), Expect(2) = 1e-79
 Identities = 186/553 (33%), Positives = 281/553 (50%), Gaps = 4/553 (0%)
 Frame = +3

Query: 3    TTVVQRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIF 182
            TT+ +R+YN I  +      WL S  D+   F  Y+  L+ S  P    ++ + +   + 
Sbjct: 967  TTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSNGPQQWEEVLDFVDTAVT 1026

Query: 183  ADENASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTH 362
            A+ N  L +      +K  V+ +   K+PGPDG    F++  W  +   I E+     T 
Sbjct: 1027 AEMNKILSSPVSLLEVKKAVFDLGATKAPGPDGFSGIFYQNQWEWVQSIIHESALQHQTS 1086

Query: 363  DHLLKTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQ 542
              LL+  N T LALIPK        +++PIALCN  YKI+TKI+ASR++  +  ++S  Q
Sbjct: 1087 SSLLQVMNRTHLALIPKVKAPTHPSHYRPIALCNFSYKILTKIIASRLQPFMSELISDNQ 1146

Query: 543  AAFIPSRCMSDKIIISYEIIHHLNQKKR-NLSLMALKVDMAKAYDRVEWTLLTQILTKHG 719
            +AF+ +R + D +II++EI HHL   +  N     LK+DM KAYDRVEW  L  +L K G
Sbjct: 1147 SAFVSNRQIQDNVIIAHEIYHHLKLTRSCNNGAFGLKLDMNKAYDRVEWNFLEAVLRKMG 1206

Query: 720  FSDHFVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITR 899
            F D ++ L ++CV+T   S+LING     FL S+GLRQGDP+SP LF    ++LSR+I +
Sbjct: 1207 FVDSWIGLVMSCVTTSSLSVLINGKPGPSFLPSRGLRQGDPLSPFLFLFVNDVLSRMINK 1266

Query: 900  AELGGSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFD 1079
                  +  V I   + P+S L FADD   F RAT+Q  + L ++L+TYC+ SGQ +N +
Sbjct: 1267 MCQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLLHTYCIASGQLINVE 1326

Query: 1080 KSVIHFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEK-MKTVA 1256
            KS I FS N    +   + +I+ I   S  G YLG P +   S+ +A   I +  ++ V 
Sbjct: 1327 KSSIFFSPNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSKKKALGFIKDSILRKVK 1386

Query: 1257 GNKNPFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMITGKDT-- 1430
            G K            E   K     +  Y    ++F +   K              DT  
Sbjct: 1387 GWKQATLSQAGK---EVLIKAVATAIPAYPMGCFKFPSTLCKELNGILADFWWGNVDTRG 1443

Query: 1431 LTLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRL 1610
            +  ++WD +  PK  GG+ FR   D N   +AK  W++  +    W ++++  Y      
Sbjct: 1444 IHWKSWDFLARPKKDGGMGFRNLEDFNNSLLAKQAWRLHQNPFALWARVLEQLYYPRSSF 1503

Query: 1611 LDLQKSPYSASWI 1649
            L+  K P + SWI
Sbjct: 1504 LEAPKGP-NPSWI 1515



 Score = 26.2 bits (56), Expect(2) = 1e-79
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
 Frame = +2

Query: 1652 SGIWET----KDLIEKSACVKVGLYSTAHIWECPWIPDLEGFKXXXXXXXXXXXXLVLEL 1819
            S IW +    ++ I K A   +G   + +I    WIP +                 V EL
Sbjct: 1513 SWIWNSLLIGRNFIHKEALWNIGNGFSVNIVGDNWIPSIP--PSTVSLPLNEDNSRVCEL 1570

Query: 1820 IDRDLKTWNCSLVMQTFPIHIAQAILKIKIPPSQEHDSLVW 1942
            I+ D K+W      +T        I  I I      D+L+W
Sbjct: 1571 INWDTKSWELDHFAETITPTQRLLISAIPITSLAAPDTLIW 1611


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  296 bits (758), Expect = 4e-77
 Identities = 176/556 (31%), Positives = 289/556 (51%), Gaps = 11/556 (1%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLD---NLIAPYIFA 185
            +++ N +  +      W    + I NIF  Y+ ++FTS+NP+  + L+   ++I P +  
Sbjct: 364  RKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPS-DLSLEAVMSVIEPVVTE 422

Query: 186  DENASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHD 365
            + N  L+       I   +  M   K+PGPDG+   F++ +WHI+G  +   +       
Sbjct: 423  EHNLKLLEPFSKDEILAALQQMHPCKAPGPDGMHVIFYQRFWHIVGDDVTSFISNILHGH 482

Query: 366  HLLKTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQA 545
                  N+T +ALIPK     K   F+PIALCN++YK+++K +  R++S L  I+S  Q+
Sbjct: 483  SSPSCVNNTNIALIPKVKNPTKAAEFRPIALCNVLYKLMSKAIVMRLKSFLPEIISENQS 542

Query: 546  AFIPSRCMSDKIIISYEIIHHLNQKKRNLS-LMALKVDMAKAYDRVEWTLLTQILTKHGF 722
            AF+P R ++D  +I+ E+ H +  + R+    +A+K+DM+KAYDRVEW  L ++L   GF
Sbjct: 543  AFVPGRLITDNALIAMEVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGF 602

Query: 723  SDHFVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRA 902
               +V+L +  VS+  +S +INGSV G  + ++GLRQGDP+SP LF    +  S++I R 
Sbjct: 603  DGRWVNLIMEFVSSVTYSFIINGSVCGSVVPARGLRQGDPLSPYLFIMVADAFSKMIQRK 662

Query: 903  ELGGSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDK 1082
                 + G K  R  P IS L FADD  +F RA  QE   + +ILN Y + SGQ +N++K
Sbjct: 663  VQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEK 722

Query: 1083 SVIHFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM-KTVAG 1259
            S + +S+    + K E+ NIL++ +      YLG P   G S+   F+ +++++ K + G
Sbjct: 723  SEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQG 782

Query: 1260 NKNPFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMITGKDT--- 1430
             K    KL      E   K     +  Y   +Y+F    I+  + +         DT   
Sbjct: 783  WK---EKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRK 839

Query: 1431 LTLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRL 1610
            +  + WDSMC  K  GG+ F++    N   + +  W++  +      +++K+KY      
Sbjct: 840  IHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKYFPNCDF 899

Query: 1611 LDL---QKSPYSASWI 1649
            L+      S YS S I
Sbjct: 900  LNAPLGHSSSYSWSSI 915



 Score = 86.3 bits (212), Expect = 8e-14
 Identities = 84/346 (24%), Positives = 134/346 (38%), Gaps = 15/346 (4%)
 Frame = +2

Query: 1253 GWKQKSLSQAGRSTLIRTMLQTLPSHTKEVFLLPVSICNKLDKTVRDFFWGFNDN-RKRH 1429
            GWK+K LS+AG+  L+++++Q +P++   V+  PV I  K+   +  F+WG +D  RK H
Sbjct: 782  GWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIH 841

Query: 1430 F-NT*SL-------GLYVCTKTFWRP*L*GI*G*Q*GICSQTGVANLLRQR*SMGTAGQI 1585
            + N  S+       G+     T +   L G                L R+  S+   G++
Sbjct: 842  WKNWDSMCNLKCFGGMGFKDLTIFNDALLG-----------RQAWRLTREPQSL--LGRV 888

Query: 1586 EVPKRFKTSRLAEKPI*--CIMDMSGIWETKDLIEKSACVKVGLYSTAHIWECPWIPDLE 1759
               K F        P+        S IW +K L+++    +VG  S  ++W  PW+ D  
Sbjct: 889  MKAKYFPNCDFLNAPLGHSSSYSWSSIWSSKALLKEGVIWRVGNGSQINMWSDPWVLDEG 948

Query: 1760 GFKXXXXXXXXXXXXLVLELIDRDLKTWNCSLVMQTFPIHIAQAILKIKIPPSQEHDSLV 1939
            G               V ELID D   W  SL+         + IL   +  +   D L 
Sbjct: 949  G--RFLTSTPHASIRWVSELIDFDRMEWKTSLLESFLNERDLRCILASPLSATPVPDELT 1006

Query: 1940 WTPXXXXXXXXXXXXLIETKQRFAIQSGDN----RKL*KDLWSSSLHPRHQQLLCKIIVN 2107
            W                  K  + I  G N     +   D+WS  + P+ +  L ++   
Sbjct: 1007 WA--------FTKDATYSVKTAYMIGKGGNLDNFHQAWVDIWSLDVSPKVRHFLWRLCTT 1058

Query: 2108 ALPTKMRLKNFLPVESCLCPICXXXXXXXXXXFLKCPLTRAAWFNS 2245
            +LP +  LK+    +  LCP               CP  R  W +S
Sbjct: 1059 SLPVRSLLKHRHLTDDDLCPWGCGEIETQRHAIFDCPKMRDLWLDS 1104


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  295 bits (754), Expect = 1e-76
 Identities = 183/544 (33%), Positives = 288/544 (52%), Gaps = 16/544 (2%)
 Frame = +3

Query: 87   GNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADENASLIAIPEAYSIKDVVWSMKVGKS 266
            G +   Y+ NLF S+NP+   D  + + P +    N SL+    A  IK+ V+S+K   +
Sbjct: 349  GEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASA 408

Query: 267  PGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLLKTFNHTFLALIPKTNIANKMDNFK 446
            PGPDG+   F + YW  +G ++   V+ FF    +   +N+T L LIPKT    +M + +
Sbjct: 409  PGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLR 468

Query: 447  PIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFIPSRCMSDKIIISYEIIHHLNQKKR 626
            PI+LC+++YKII+KI+A R++  L  IVS  Q+AF+  R ++D I++++E++H L    R
Sbjct: 469  PISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPR 528

Query: 627  NLS-LMALKVDMAKAYDRVEWTLLTQILTKHGFSDHFVSLTLNCVSTPIFSLLINGSVFG 803
              S  MA+K DM+KAYDRVEW+ L  +L   GF   +V+  + CVS+  +S+LIN   FG
Sbjct: 529  ISSEFMAVKSDMSKAYDRVEWSYLRSLLLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFG 588

Query: 804  YFLASKGLRQGDPMSPALFTTYFELLSRLITRAELGGSIQGVKICRQSPPISQLMFADDL 983
              +  +GLRQGDP+SP LF    E L+ L+ +A+  G+++G++     P +  L+FADD 
Sbjct: 589  LIILQRGLRQGDPLSPFLFVLCTEGLTHLLNKAQWEGALEGIQFSENGPMVHHLLFADDS 648

Query: 984  SIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVIHFSKNADYNLKAEILNILDIGECS 1163
                +A+ +++  L++IL  Y   +GQ++N +KS I F +  D  LK  I   L I    
Sbjct: 649  LFLCKASREQSLVLQKILKVYGNATGQTINLNKSSITFGEKVDEQLKGTIRTCLGIFTEG 708

Query: 1164 HKGLYLGAPFYKGPSRNQAFNGIVEKMK----------TVAGNKNPFHK---LEDPP*LE 1304
              G YLG P     S+    + + +++K             G K    K   L  P    
Sbjct: 709  GAGTYLGLPECFSGSKVDMLHYLKDRLKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAM 768

Query: 1305 QCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMITGKDTLTLEAWDSMCAPKHSGGL 1484
             C+K  P+T      S    A+ W    + S  +           ++W+ +C PK SGGL
Sbjct: 769  SCFK-LPITTCENLES--AMASFWWDSCDHSRKIHW---------QSWERLCLPKDSGGL 816

Query: 1485 SFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRLLD--LQKSPYSASWICQV 1658
             FR+ +  N+  +AK  W++    D    +L+KS+Y      LD  L + P S  W   +
Sbjct: 817  GFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATDFLDAALSQRP-SFGWRSIL 875

Query: 1659 FGRQ 1670
            FGR+
Sbjct: 876  FGRE 879


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  295 bits (754), Expect = 1e-76
 Identities = 183/544 (33%), Positives = 288/544 (52%), Gaps = 16/544 (2%)
 Frame = +3

Query: 87   GNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADENASLIAIPEAYSIKDVVWSMKVGKS 266
            G +   Y+ NLF S+NP+   D  + + P +    N SL+    A  IK+ V+S+K   +
Sbjct: 352  GEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASA 411

Query: 267  PGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLLKTFNHTFLALIPKTNIANKMDNFK 446
            PGPDG+   F + YW  +G ++   V+ FF    +   +N+T L LIPKT    +M + +
Sbjct: 412  PGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLR 471

Query: 447  PIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFIPSRCMSDKIIISYEIIHHLNQKKR 626
            PI+LC+++YKII+KI+A R++  L  IVS  Q+AF+  R ++D I++++E++H L    R
Sbjct: 472  PISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPR 531

Query: 627  NLS-LMALKVDMAKAYDRVEWTLLTQILTKHGFSDHFVSLTLNCVSTPIFSLLINGSVFG 803
              S  MA+K DM+KAYDRVEW+ L  +L   GF   +V+  + CVS+  +S+LIN   FG
Sbjct: 532  ISSEFMAVKSDMSKAYDRVEWSYLRSLLLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFG 591

Query: 804  YFLASKGLRQGDPMSPALFTTYFELLSRLITRAELGGSIQGVKICRQSPPISQLMFADDL 983
              +  +GLRQGDP+SP LF    E L+ L+ +A+  G+++G++     P +  L+FADD 
Sbjct: 592  LIILQRGLRQGDPLSPFLFVLCTEGLTHLLNKAQWEGALEGIQFSENGPMVHHLLFADDS 651

Query: 984  SIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVIHFSKNADYNLKAEILNILDIGECS 1163
                +A+ +++  L++IL  Y   +GQ++N +KS I F +  D  LK  I   L I    
Sbjct: 652  LFLCKASREQSLVLQKILKVYGNATGQTINLNKSSITFGEKVDEQLKGTIRTCLGIFTEG 711

Query: 1164 HKGLYLGAPFYKGPSRNQAFNGIVEKMK----------TVAGNKNPFHK---LEDPP*LE 1304
              G YLG P     S+    + + +++K             G K    K   L  P    
Sbjct: 712  GAGTYLGLPECFSGSKVDMLHYLKDRLKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAM 771

Query: 1305 QCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMITGKDTLTLEAWDSMCAPKHSGGL 1484
             C+K  P+T      S    A+ W    + S  +           ++W+ +C PK SGGL
Sbjct: 772  SCFK-LPITTCENLES--AMASFWWDSCDHSRKIHW---------QSWERLCLPKDSGGL 819

Query: 1485 SFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRLLD--LQKSPYSASWICQV 1658
             FR+ +  N+  +AK  W++    D    +L+KS+Y      LD  L + P S  W   +
Sbjct: 820  GFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATDFLDAALSQRP-SFGWRSIL 878

Query: 1659 FGRQ 1670
            FGR+
Sbjct: 879  FGRE 882


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  295 bits (754), Expect = 1e-76
 Identities = 173/533 (32%), Positives = 289/533 (54%), Gaps = 7/533 (1%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADEN 194
            +R  N I  +I  +    +S ED+G + E Y+K LF S +  + ++    + P +    N
Sbjct: 362  RRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMN 421

Query: 195  ASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLL 374
             +L+A      ++   +S+   K PGPDG+    ++ +W  +G +I E VQ FF    + 
Sbjct: 422  NNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIE 481

Query: 375  KTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFI 554
            +  N T + LIPK   A KM +F+PI+LCN+IYK+I K++A+R++ +L  ++S  QAAF+
Sbjct: 482  EGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFV 541

Query: 555  PSRCMSDKIIISYEIIHHLNQKKR-NLSLMALKVDMAKAYDRVEWTLLTQILTKHGFSDH 731
              R +SD I+I++E++H L+   + +   +A+K D++KAYDRVEW  L + +   GF+DH
Sbjct: 542  KGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADH 601

Query: 732  FVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAELG 911
            ++ L + CV +  + +LING+  G  + S+GLRQGDP+SP LF    E+L +++  AE  
Sbjct: 602  WIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQK 661

Query: 912  GSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVI 1091
              I G+K+ R +PPIS L+FADD   + +   +   ++  I+  Y + SGQ VN+ KS I
Sbjct: 662  NQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKSSI 721

Query: 1092 HFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM-KTVAGNKN 1268
            +F K+     +  +   L I     +G+YLG P     S+    + + +++ K V G ++
Sbjct: 722  YFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGWQS 781

Query: 1269 PFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSMITGKDT-----L 1433
             F     P   E   K   + L  Y  S ++      +  +I S ++    K+      L
Sbjct: 782  NF---LSPGGKEILLKAVAMALPTYTMSCFKIPKTICQ--QIESVMAEFWWKNKKEGRGL 836

Query: 1434 TLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKY 1592
              +AW  +  PK  GGL F+E    N   + K  W++  +KD    ++ KS+Y
Sbjct: 837  HWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRY 889


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 1152

 Score =  294 bits (753), Expect = 1e-76
 Identities = 183/567 (32%), Positives = 291/567 (51%), Gaps = 15/567 (2%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADEN 194
            +++ N +  + + D +W +   ++  I   YYK LFTS+NP       + +   I  D N
Sbjct: 146  RKKKNTLKGLFNEDGVWCNDECEMEEIILRYYKKLFTSSNPQLREQDLSFVTEVISEDAN 205

Query: 195  ASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLL 374
              L                           G    + +W+++G  ++ AV+ F     LL
Sbjct: 206  RRLN--------------------------GTISEEEFWNVVGTDVVAAVREFLNSKELL 239

Query: 375  KTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFI 554
            +  N T++ LIPK      +   +PI+LCN+IYK+ +K+LA+RI+ LLD I+S  Q+AF+
Sbjct: 240  REINCTWVTLIPKVKSPEYVTQLRPISLCNVIYKLGSKVLANRIKPLLDDIISQQQSAFV 299

Query: 555  PSRCMSDKIIISYEIIHHLN-QKKRNLSLMALKVDMAKAYDRVEWTLLTQILTKHGFSDH 731
            P R +SD  ++++E+ H L  ++   + L ALK+DM+KAYDRVEW  L ++L K GF D 
Sbjct: 300  PGRLISDNSLLAFEVSHCLKCRRSGKVGLCALKLDMSKAYDRVEWCFLEKVLGKLGFGDT 359

Query: 732  FVSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAELG 911
            FV   ++C++T  +S L+NG   G  + ++GLRQGD +SP LF    E+LSR+I +AE  
Sbjct: 360  FVRWIMHCITTVSYSFLVNGEPCGKLIPTRGLRQGDAISPYLFLLCAEVLSRMIKQAETN 419

Query: 912  GSIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVI 1091
            G IQGVK+C  +P IS L FADD  IF RA  ++   +K+I  TY   SGQ +N++KS +
Sbjct: 420  GEIQGVKVCTDAPSISHLYFADDSFIFSRAEERDMLCMKDIFVTYETMSGQQINYEKSSV 479

Query: 1092 HFSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM--------- 1244
             FS+N     + ++  +L +    +   YLG P     S+++AF  +++++         
Sbjct: 480  SFSRNVPLWKQHDLAAVLGVQRVENHEKYLGLPTELSYSKDEAFRYLIDRVRKRTQGWRD 539

Query: 1245 KTVAG-NKNPFHKL---EDPP*LEQCYKHFPVTLRRYFYSLYQFATNWIKLFEISSGVSM 1412
            KT++G  K    K      P  +  C++  P  L    + L   A  W   F     +  
Sbjct: 540  KTLSGVGKEVLLKAVIQSIPTYVMSCFE-LPRHLCNEMHQL--MARFWWGEFGDERKIHW 596

Query: 1413 ITGKDTLTLEAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKY 1592
            I         AWD +C+ K  GGL FR+    N+  +AK GW++         Q++K KY
Sbjct: 597  I---------AWDKLCSSKKEGGLGFRDMHVFNKALLAKQGWRMLCRPQSLLAQVLKMKY 647

Query: 1593 LRGLRLLDLQKSP-YSASWICQVFGRQ 1670
                 L+  +     S SW   + G++
Sbjct: 648  FPTSSLIQAEVGKRISYSWRSLMRGKE 674



 Score = 92.8 bits (229), Expect = 8e-16
 Identities = 104/471 (22%), Positives = 184/471 (39%), Gaps = 28/471 (5%)
 Frame = +2

Query: 1253 GWKQKSLSQAGRSTLIRTMLQTLPSHTKEVFLLPVSICNKLDKTVRDFFWG-FNDNRKRH 1429
            GW+ K+LS  G+  L++ ++Q++P++    F LP  +CN++ + +  F+WG F D RK H
Sbjct: 536  GWRDKTLSGVGKEVLLKAVIQSIPTYVMSCFELPRHLCNEMHQLMARFWWGEFGDERKIH 595

Query: 1430 F----------NT*SLG---LYVCTKTFWRP*L*GI*G*Q*GICSQTGVANLLRQR*SMG 1570
            +              LG   ++V  K                + ++ G   L R +    
Sbjct: 596  WIAWDKLCSSKKEGGLGFRDMHVFNKA---------------LLAKQGWRMLCRPQ---S 637

Query: 1571 TAGQIEVPKRFKTSRLAEKPI*CIMDMS--GIWETKDLIEKSACVKVGLYSTAHIWECPW 1744
               Q+   K F TS L +  +   +  S   +   K+L+++    +VG     H+W+ PW
Sbjct: 638  LLAQVLKMKYFPTSSLIQAEVGKRISYSWRSLMRGKELLQQGLRFQVGNGENIHLWDDPW 697

Query: 1745 IPDLEGFKXXXXXXXXXXXXLVLELIDRDLKTWNCSLVMQTFPIHIAQAILKIKIPPSQE 1924
            +P    FK             V ELI+     WN  L+ + F    ++ ILKI +  +  
Sbjct: 698  LPLPYTFKPFSLPMHGSEGMRVCELIEEGTGGWNEWLLEELFTPMESEIILKIPLSLNGG 757

Query: 1925 HDSLVW----TPXXXXXXXXXXXXLIETKQRFAIQSGDN---RKL*KDLWSSSLHPRHQQ 2083
             D LVW                  L++   R A  S  +    +L   LW + + P+ + 
Sbjct: 758  EDRLVWHFDNKGCYNVKSGYFVGRLLDGLNRKASGSDSDVQWSRLWCKLWRTQVPPKVRM 817

Query: 2084 LLCKIIVNALPTKMRL-KNFLPVESCLCPICXXXXXXXXXXFLKCPLTRAAWFNSPWNLK 2260
               +++   LP++  L K  + +    C  C          F  C   +  W      + 
Sbjct: 818  HAWRLVKGTLPSRAALVKKQVQLPDVNCVFCSTNVEDSLHLFKNCEALQPFWQQGMVQIH 877

Query: 2261 IEAFGH*NILRWISKLVNLSN*IAPNIEDRKEILNFAAVLMESIWLCRNNVDHRKQ---M 2431
                   ++  W   +V + +          E L    + +  IW+ RNN+  R Q   +
Sbjct: 878  PRTHPSISVEVWFWDMVEMLS---------GEKLEGFLMALWVIWVERNNMVWRGQFYNI 928

Query: 2432 PNWNEWISTIVRSSRRY*LASI-NRKKNHAGIRPNQIWKTPLPGWTKINYD 2581
             N  +W S+++   +     S+  RKKN +       W  P  G  ++N D
Sbjct: 929  TNMMDWSSSLLLEYKHCHQRSVGTRKKNKSK------WTCPPSGRLRVNID 973


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  294 bits (753), Expect = 1e-76
 Identities = 181/559 (32%), Positives = 291/559 (52%), Gaps = 7/559 (1%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADEN 194
            +RR N I  ++  D     S+E I  + E++Y+NLF+S   +   ++ + I   +    N
Sbjct: 378  RRRTNRIKELVRDDGSRCISQEGIKRMAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFIN 437

Query: 195  ASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLL 374
              L        IK  ++ M   K+PGPDG    F++T+W I+   I  AV+ F   + + 
Sbjct: 438  GELGKQYTNEEIKTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEIP 497

Query: 375  KTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFI 554
            +    + + LIPK N A+ +  F+PI+LCN++YKI +K+LA+R++  L  IVS FQ+AF+
Sbjct: 498  EGLCDSVVVLIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFV 557

Query: 555  PSRCMSDKIIISYEIIHHLNQKKRNLSLMALKVDMAKAYDRVEWTLLTQILTKHGFSDHF 734
            P R ++D  +++YE +H + ++       ALK+DM KAYDRVEW  L+  L+K GFS  +
Sbjct: 558  PGRLITDSALVAYECLHTIRKQHNKNPFFALKIDMMKAYDRVEWAYLSGCLSKLGFSQDW 617

Query: 735  VSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAELGG 914
            ++  + CVS+  +++ ING +    + S+G+RQGDP+SP LF    E LS L+ + E+ G
Sbjct: 618  INTVMRCVSSVRYAVKINGELTKPVVPSRGIRQGDPISPYLFLLCTEGLSCLLHKKEVAG 677

Query: 915  SIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVIH 1094
             +QG+K  R  PPIS L+FADD   F +A  +  + LK  L +YC  SGQ +N  KS I 
Sbjct: 678  ELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQKINLHKSSIF 737

Query: 1095 FSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM-KTVAG-NKN 1268
            F K     +K  + + L +     +  YLG P   G +    F  + E++ K V G    
Sbjct: 738  FGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTDR 797

Query: 1269 PFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATN---WIKLFEISSGVSMITGKDTLTL 1439
            P  +      +E   K     +  Y  S ++   +    +K            GK  +  
Sbjct: 798  PLSRAG----METMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHW 853

Query: 1440 EAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRLLDL 1619
            ++W  +  PK  GG+ FREF   N+  + +  W++  D D    +++K +Y       + 
Sbjct: 854  KSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEA 913

Query: 1620 --QKSPYSASWICQVFGRQ 1670
               KSP S +W   +FGR+
Sbjct: 914  AQPKSP-SFTWRSLLFGRE 931



 Score = 67.0 bits (162), Expect = 5e-08
 Identities = 95/408 (23%), Positives = 153/408 (37%), Gaps = 22/408 (5%)
 Frame = +2

Query: 1253 GWKQKSLSQAGRSTLIRTMLQTLPSHTKEVFLLPVSICNKLDKTVRDFFWGFNDNR-KRH 1429
            GW  + LS+AG  T+++ + Q +P++    F +PVSIC K+   + D +WGF D + K H
Sbjct: 793  GWTDRPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMH 852

Query: 1430 FNT*SLGLYVCTKTFWRP*L*GI*G*Q*GICSQTGVAN----LLRQR*SMGTAGQIEVPK 1597
            + + S   ++ T  F    L G+   +    +Q  +      LL    S+    ++   +
Sbjct: 853  WKSWS---WLSTPKF----LGGMGFREFTTFNQAMLGRQCWRLLTDPDSL--CSRVLKGR 903

Query: 1598 RFKTSRL--AEKPI*CIMDMSGIWETKDLIEKSACVKVGLYSTAHIWECPWIPDLEGFKX 1771
             F  S    A +P         +   ++L+ K     VG   T  I+   WIP   GF+ 
Sbjct: 904  YFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP---GFRP 960

Query: 1772 XXXXXXXXXXX--LVLELIDRDLKTWNCSLVMQTFPIHIAQAILKIKIPPSQEHDSLVWT 1945
                          V  L++ D + W+  L+   FP+ IA+ IL+I I    + D   W 
Sbjct: 961  QLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASWP 1020

Query: 1946 -PXXXXXXXXXXXXLIETKQRFAIQSGDNR----------KL*KDLWSSSLHPRHQQLLC 2092
                          L  ++  FA QS   R          K  K LW  +   + +  L 
Sbjct: 1021 HDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKITLW 1080

Query: 2093 KIIVNALPTKMRLKNFLPVESCLCPICXXXXXXXXXXFLKCPLTRAAW--FNSPWNLKIE 2266
            +     L T  +L+      +  C  C          FL CP     W        +K+ 
Sbjct: 1081 RAAHECLATGFQLRRRHIPSTDGCVFC-NRDDTVEHVFLFCPFAAQIWEEIKGKCAVKLG 1139

Query: 2267 AFGH*NILRWISKLVNLSN*IAPNIEDRKEILNFAAVLMESIWLCRNN 2410
              G   + +WI   +   +  A  +          AV    IW  RNN
Sbjct: 1140 RNGFSTMRQWIFDFLKRGSSHANTL---------LAVTFWHIWEARNN 1178


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score =  294 bits (753), Expect = 1e-76
 Identities = 181/559 (32%), Positives = 291/559 (52%), Gaps = 7/559 (1%)
 Frame = +3

Query: 15   QRRYNCINYIISSDHLWLSSREDIGNIFELYYKNLFTSTNPNFPIDLDNLIAPYIFADEN 194
            +RR N I  ++  D     S+E I  + E++Y+NLF+S   +   ++ + I   +    N
Sbjct: 335  RRRTNRIKELVRDDGSRCISQEGIKRMAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFIN 394

Query: 195  ASLIAIPEAYSIKDVVWSMKVGKSPGPDGLGPNFHKTYWHIIGPRIIEAVQYFFTHDHLL 374
              L        IK  ++ M   K+PGPDG    F++T+W I+   I  AV+ F   + + 
Sbjct: 395  GELGKQYTNEEIKTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEIP 454

Query: 375  KTFNHTFLALIPKTNIANKMDNFKPIALCNIIYKIITKILASRIRSLLDRIVSPFQAAFI 554
            +    + + LIPK N A+ +  F+PI+LCN++YKI +K+LA+R++  L  IVS FQ+AF+
Sbjct: 455  EGLCDSVVVLIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFV 514

Query: 555  PSRCMSDKIIISYEIIHHLNQKKRNLSLMALKVDMAKAYDRVEWTLLTQILTKHGFSDHF 734
            P R ++D  +++YE +H + ++       ALK+DM KAYDRVEW  L+  L+K GFS  +
Sbjct: 515  PGRLITDSALVAYECLHTIRKQHNKNPFFALKIDMMKAYDRVEWAYLSGCLSKLGFSQDW 574

Query: 735  VSLTLNCVSTPIFSLLINGSVFGYFLASKGLRQGDPMSPALFTTYFELLSRLITRAELGG 914
            ++  + CVS+  +++ ING +    + S+G+RQGDP+SP LF    E LS L+ + E+ G
Sbjct: 575  INTVMRCVSSVRYAVKINGELTKPVVPSRGIRQGDPISPYLFLLCTEGLSCLLHKKEVAG 634

Query: 915  SIQGVKICRQSPPISQLMFADDLSIFRRATIQEAKELKEILNTYCMWSGQSVNFDKSVIH 1094
             +QG+K  R  PPIS L+FADD   F +A  +  + LK  L +YC  SGQ +N  KS I 
Sbjct: 635  ELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQKINLHKSSIF 694

Query: 1095 FSKNADYNLKAEILNILDIGECSHKGLYLGAPFYKGPSRNQAFNGIVEKM-KTVAG-NKN 1268
            F K     +K  + + L +     +  YLG P   G +    F  + E++ K V G    
Sbjct: 695  FGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTDR 754

Query: 1269 PFHKLEDPP*LEQCYKHFPVTLRRYFYSLYQFATN---WIKLFEISSGVSMITGKDTLTL 1439
            P  +      +E   K     +  Y  S ++   +    +K            GK  +  
Sbjct: 755  PLSRAG----METMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHW 810

Query: 1440 EAWDSMCAPKHSGGLSFREFRDNNRVFVAKLGWQICLDKDKAWVQLVKSKYLRGLRLLDL 1619
            ++W  +  PK  GG+ FREF   N+  + +  W++  D D    +++K +Y       + 
Sbjct: 811  KSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEA 870

Query: 1620 --QKSPYSASWICQVFGRQ 1670
               KSP S +W   +FGR+
Sbjct: 871  AQPKSP-SFTWRSLLFGRE 888



 Score = 67.0 bits (162), Expect = 5e-08
 Identities = 95/408 (23%), Positives = 153/408 (37%), Gaps = 22/408 (5%)
 Frame = +2

Query: 1253 GWKQKSLSQAGRSTLIRTMLQTLPSHTKEVFLLPVSICNKLDKTVRDFFWGFNDNR-KRH 1429
            GW  + LS+AG  T+++ + Q +P++    F +PVSIC K+   + D +WGF D + K H
Sbjct: 750  GWTDRPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMH 809

Query: 1430 FNT*SLGLYVCTKTFWRP*L*GI*G*Q*GICSQTGVAN----LLRQR*SMGTAGQIEVPK 1597
            + + S   ++ T  F    L G+   +    +Q  +      LL    S+    ++   +
Sbjct: 810  WKSWS---WLSTPKF----LGGMGFREFTTFNQAMLGRQCWRLLTDPDSL--CSRVLKGR 860

Query: 1598 RFKTSRL--AEKPI*CIMDMSGIWETKDLIEKSACVKVGLYSTAHIWECPWIPDLEGFKX 1771
             F  S    A +P         +   ++L+ K     VG   T  I+   WIP   GF+ 
Sbjct: 861  YFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP---GFRP 917

Query: 1772 XXXXXXXXXXX--LVLELIDRDLKTWNCSLVMQTFPIHIAQAILKIKIPPSQEHDSLVWT 1945
                          V  L++ D + W+  L+   FP+ IA+ IL+I I    + D   W 
Sbjct: 918  QLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASWP 977

Query: 1946 -PXXXXXXXXXXXXLIETKQRFAIQSGDNR----------KL*KDLWSSSLHPRHQQLLC 2092
                          L  ++  FA QS   R          K  K LW  +   + +  L 
Sbjct: 978  HDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKITLW 1037

Query: 2093 KIIVNALPTKMRLKNFLPVESCLCPICXXXXXXXXXXFLKCPLTRAAW--FNSPWNLKIE 2266
            +     L T  +L+      +  C  C          FL CP     W        +K+ 
Sbjct: 1038 RAAHECLATGFQLRRRHIPSTDGCVFC-NRDDTVEHVFLFCPFAAQIWEEIKGKCAVKLG 1096

Query: 2267 AFGH*NILRWISKLVNLSN*IAPNIEDRKEILNFAAVLMESIWLCRNN 2410
              G   + +WI   +   +  A  +          AV    IW  RNN
Sbjct: 1097 RNGFSTMRQWIFDFLKRGSSHANTL---------LAVTFWHIWEARNN 1135