BLASTX nr result

ID: Rauwolfia21_contig00004632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00004632
         (1513 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319603.2| hypothetical protein POPTR_0013s03320g [Popu...    70   3e-09
gb|ABK94018.1| unknown [Populus trichocarpa]                           69   7e-09
gb|EOY11185.1| Uncharacterized protein TCM_026440 [Theobroma cacao]    66   3e-08
ref|XP_006382731.1| hypothetical protein POPTR_0005s04860g [Popu...    59   5e-06
ref|XP_002328522.1| predicted protein [Populus trichocarpa]            59   5e-06

>ref|XP_002319603.2| hypothetical protein POPTR_0013s03320g [Populus trichocarpa]
           gi|550324837|gb|EEE95526.2| hypothetical protein
           POPTR_0013s03320g [Populus trichocarpa]
          Length = 295

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 85/305 (27%), Positives = 119/305 (39%), Gaps = 10/305 (3%)
 Frame = +2

Query: 95  DAGRKSTYSAMAPPDQGQNLVIVDAEGRKIPV--FRHGSNGQTYVIKEIVERTSIPASRF 268
           D G K+ Y     PD     VI+DA+GRK P+  +R   N   YV K     T     + 
Sbjct: 21  DYGSKTGYV----PDHVCRPVIIDADGRKRPIISYRVDQNADHYVTK-----TETYYQQH 71

Query: 269 LFFEYGYKSDHESRKEELFSDYGAEKRYVHPSVSTYHDRPENVEYILLDSAFDIDSPEEL 448
           +     Y+     R  E +  +GAE ++  P  S                      P+++
Sbjct: 72  VHPPMEYEDKEVPRWSEEY--HGAENKFRRPLASAD------------------GRPQKV 111

Query: 449 EEFMNKVLIEASRGPKRSVPTVPLTSARHSGPDRIVQENTRKSGDERD-FRGDDRKTLNG 625
           EEF+ KV IEASR PK   P     S +   P     +      DER  F   D     G
Sbjct: 112 EEFITKVQIEASR-PKEYAPWD--ASYQRQTPKSTGYDGYTGGYDERSGFSNKDLLKPGG 168

Query: 626 SPKRDRQNEPYLNSKGANTHPTIGNN----RDVHEGRNAR-NYQLSKPTNDIGTAVGFLK 790
           +  R+   + Y   +G+N  PT+  +    R  H    A  N  LS  TNDI  AVG L+
Sbjct: 169 NAHRNDNYDDYYRKQGSNMEPTMNTSGGWARPSHSTWAAPPNAPLSGATNDISAAVGLLR 228

Query: 791 EPVKPSNANGPVQTEINRQPIKTVPLPRT--RWLTSSNKSSPETKKEAKDYDSXXXXXXX 964
           E  KPS +  P           T+       R+   +  S P T+ ++  Y S       
Sbjct: 229 EVAKPSFSTSPPSRYREPTHANTIDSKEAARRYGNFNYSSRPYTRDDS--YTSTIDSREA 286

Query: 965 SRNYR 979
           +R YR
Sbjct: 287 ARKYR 291


>gb|ABK94018.1| unknown [Populus trichocarpa]
          Length = 295

 Score = 68.6 bits (166), Expect = 7e-09
 Identities = 74/251 (29%), Positives = 102/251 (40%), Gaps = 8/251 (3%)
 Frame = +2

Query: 95  DAGRKSTYSAMAPPDQGQNLVIVDAEGRKIPV--FRHGSNGQTYVIKEIVERTSIPASRF 268
           D G K+ Y     PD     VI+DA+GRK P+  +R   N   YV K     T     + 
Sbjct: 21  DYGSKTGYV----PDHVCRPVIIDADGRKRPIISYRVDQNADQYVTK-----TETYYQQH 71

Query: 269 LFFEYGYKSDHESRKEELFSDYGAEKRYVHPSVSTYHDRPENVEYILLDSAFDIDSPEEL 448
           +     Y+     R  E +  +GAE ++  P  S                      P+++
Sbjct: 72  VHPPKEYEDKEVPRWSEEY--HGAENKFRRPLASAD------------------GRPQKV 111

Query: 449 EEFMNKVLIEASRGPKRSVPTVPLTSARHSGPDRIVQENTRKSGDERD-FRGDDRKTLNG 625
           EEF+ KV +EASR P+   P     S R   P     +      DER  F   D     G
Sbjct: 112 EEFITKVQVEASR-PQEYAPWD--ASYRRQTPKSTGYDGYTGGYDERSGFSNKDLLKPGG 168

Query: 626 SPKRDRQNEPYLNSKGANTHPTIGNN----RDVHEGRNAR-NYQLSKPTNDIGTAVGFLK 790
           +  R+   + Y   +G+N  PT+  +    R  H    A  N  LS  TNDI  AVG L+
Sbjct: 169 NAHRNDNYDDYYRKQGSNMEPTMNTSGGWARPSHSTWAAPPNAPLSGATNDISAAVGLLR 228

Query: 791 EPVKPSNANGP 823
           E  KPS +  P
Sbjct: 229 EVAKPSFSTSP 239


>gb|EOY11185.1| Uncharacterized protein TCM_026440 [Theobroma cacao]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 22/274 (8%)
 Frame = +2

Query: 56  SYSTFREVRQPFTDAGRKSTYSAMAPPDQGQNLVIVDAEGRKIPVFRHGSNGQT--YVIK 229
           +YST   +R   TD   K +Y++    D     VI+DAEGR+ P+  +  +G T  YV K
Sbjct: 14  TYSTGVPLR---TDGWSKPSYTS----DHACQPVIIDAEGRRKPIISYTPDGNTQCYVTK 66

Query: 230 -EIVERTSIPASRFLFFEYGYKSDHESRKEELFSDYG-AEKRYVHPSVSTYHDRPENVEY 403
            EIVE   +           Y+        E+  DYG  E ++  PS       P  V Y
Sbjct: 67  TEIVEHVPLVTG-------SYRQSSTPVTFEVVRDYGDGEGKWNRPSSPEKWRSP--VRY 117

Query: 404 ILLDS-------AFDIDSPEELEEFMNKVLIEASRGPK---------RSVP-TVPLTSAR 532
            + +          + +SP+++EEF+ KV  EASR  +         R  P + P+ +  
Sbjct: 118 HIEEKWNRPSSPVHEHESPQQVEEFITKVQTEASRPNQFGNLSATYWRQTPNSYPVNTGY 177

Query: 533 HSGPDRIVQENTRKSGDERDFRGDDRKTLNGSPKRDRQN-EPYLNSKGANTHPTIGNNRD 709
               D +  +  +K         DDR T++G  K ++ + EP  N+ G  T P+      
Sbjct: 178 GDQSDDLSNKEWQKPSGT--VIRDDR-TISGPYKNNKYSPEPNGNNGGVRTKPS------ 228

Query: 710 VHEGRNARNYQLSKPTNDIGTAVGFLKEPVKPSN 811
                  +  +LS+PT+DI TAV  L E  KPS+
Sbjct: 229 PEAWSTPKGARLSEPTSDINTAVACLMEAAKPSS 262


>ref|XP_006382731.1| hypothetical protein POPTR_0005s04860g [Populus trichocarpa]
            gi|550338098|gb|ERP60528.1| hypothetical protein
            POPTR_0005s04860g [Populus trichocarpa]
          Length = 299

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
 Frame = +2

Query: 710  VHEGRNARNYQLSKPTNDIGTAVGFLKEPV-----KPSNANGPV-QTEINRQPIKTVPLP 871
            VH    +   Q ++ T+D   A    + P+     +P N    + + + +  P K  P  
Sbjct: 106  VHSPLESEYKQSTRLTDDPYGAEDKFRRPMASVNSRPQNVEESITKVQTDASPPKIAPWD 165

Query: 872  RTRWLTSSNKSSPETKKEAKDYDSXXXXXXXS---RN------YRDRGKRDELKLVNHRG 1024
             + W  +   +  E   E   + +       S   RN      YR +G   E  ++   G
Sbjct: 166  ASYWRQAPKSTGYEGYDERNVFHNKDLLKPSSNAPRNDSYDDYYRKQGSNKETTMITSGG 225

Query: 1025 GAKPLENKDGYEKPKGNIAAAAQPVQTRFPGTTVQKKEENTYPGKIDSREAARRYGKLPS 1204
             A+P  +    E  K +  A   P ++R+         +  Y   +DS+EAARRYG  PS
Sbjct: 226  WARPAHSTSTAEVAKPS--ATTSPPRSRY--------RQPAYTETMDSKEAARRYGTRPS 275

Query: 1205 GRAGEEEKYKGTINCKEAAVKYNGA 1279
             R   E+ Y  TI+ +EAA KYNG+
Sbjct: 276  TR---EDSYTSTIDSREAARKYNGS 297


>ref|XP_002328522.1| predicted protein [Populus trichocarpa]
          Length = 265

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
 Frame = +2

Query: 710  VHEGRNARNYQLSKPTNDIGTAVGFLKEPV-----KPSNANGPV-QTEINRQPIKTVPLP 871
            VH    +   Q ++ T+D   A    + P+     +P N    + + + +  P K  P  
Sbjct: 72   VHSPLESEYKQSTRLTDDPYGAEDKFRRPMASVNSRPQNVEESITKVQTDASPPKIAPWD 131

Query: 872  RTRWLTSSNKSSPETKKEAKDYDSXXXXXXXS---RN------YRDRGKRDELKLVNHRG 1024
             + W  +   +  E   E   + +       S   RN      YR +G   E  ++   G
Sbjct: 132  ASYWRQAPKSTGYEGYDERNVFHNKDLLKPSSNAPRNDSYDDYYRKQGSNKETTMITSGG 191

Query: 1025 GAKPLENKDGYEKPKGNIAAAAQPVQTRFPGTTVQKKEENTYPGKIDSREAARRYGKLPS 1204
             A+P  +    E  K +  A   P ++R+         +  Y   +DS+EAARRYG  PS
Sbjct: 192  WARPAHSTSTAEVAKPS--ATTSPPRSRY--------RQPAYTETMDSKEAARRYGTRPS 241

Query: 1205 GRAGEEEKYKGTINCKEAAVKYNGA 1279
             R   E+ Y  TI+ +EAA KYNG+
Sbjct: 242  TR---EDSYTSTIDSREAARKYNGS 263


Top