BLASTX nr result

ID: Rauwolfia21_contig00004532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00004532
         (876 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71683.1| hypothetical protein VITISV_040973 [Vitis vinifera]    65   4e-08
emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]    64   6e-08
gb|EPE26994.1| P-loop containing nucleoside triphosphate hydrola...    59   2e-06
ref|XP_006420859.1| hypothetical protein CICLE_v10006218mg [Citr...    59   2e-06
ref|WP_010527116.1| ribonuclease H [Thermophagus xiamenensis]          59   2e-06
ref|XP_006437374.1| hypothetical protein CICLE_v10033861mg [Citr...    57   7e-06
ref|XP_006427911.1| hypothetical protein CICLE_v10026935mg [Citr...    57   7e-06

>emb|CAN71683.1| hypothetical protein VITISV_040973 [Vitis vinifera]
          Length = 375

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 31/76 (40%), Positives = 40/76 (52%)
 Frame = -2

Query: 809 GRFQKIKQTIFKRMGKKKAYVVFNGRNTGVTQSWPECSDAVNGYSRNCYKGYSSTKEAER 630
           G    + Q +  RM     YVVF  R +G+  SWPEC + V GY  N YK Y + +EA R
Sbjct: 249 GPLVHLSQNLLLRMANDVYYVVFAVRKSGIYNSWPECQEQVVGYKGNVYKSYKTFEEARR 308

Query: 629 AWETYEKSTDVYGSTS 582
           AW  YE   +   +TS
Sbjct: 309 AWVFYEARVNCTENTS 324


>emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]
          Length = 118

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 31/64 (48%), Positives = 36/64 (56%)
 Frame = -2

Query: 773 RMGKKKAYVVFNGRNTGVTQSWPECSDAVNGYSRNCYKGYSSTKEAERAWETYEKSTDVY 594
           RM     YVVF GR  G+  SWPEC + V GY  N YK Y + +EA RAW  YE   +  
Sbjct: 25  RMANDVYYVVFAGRKKGIYNSWPECQEQVVGYKGNVYKLYKTFEEARRAWMFYEARVNFM 84

Query: 593 GSTS 582
            STS
Sbjct: 85  ESTS 88


>gb|EPE26994.1| P-loop containing nucleoside triphosphate hydrolase [Glarea
           lozoyensis ATCC 20868]
          Length = 731

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = -2

Query: 776 KRMGKKKAYVVFNGRNTGVTQSWPECSDAVNGYSRNCYKGYSSTKEAERAWETYEKST 603
           ++   K AYVVF GR  GV  SW EC   ++GY  N  KG+ S  EA  AW+ + +ST
Sbjct: 26  RKRSTKAAYVVFIGRTRGVFTSWSECEAQIHGYPGNSQKGFESAAEARTAWKEFRRST 83


>ref|XP_006420859.1| hypothetical protein CICLE_v10006218mg [Citrus clementina]
           gi|557522732|gb|ESR34099.1| hypothetical protein
           CICLE_v10006218mg [Citrus clementina]
          Length = 124

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/69 (42%), Positives = 35/69 (50%)
 Frame = -2

Query: 770 MGKKKAYVVFNGRNTGVTQSWPECSDAVNGYSRNCYKGYSSTKEAERAWETYEKSTDVYG 591
           M  +  YVVF GR   +  SWPEC   VNG+  N YK Y+S  +AE A+  Y K  D   
Sbjct: 1   MPTQNCYVVFKGRKPDIYNSWPECQMQVNGFKGNSYKSYTSLLDAEIAYNDYIKRHDKLR 60

Query: 590 STSQQFSGT 564
            TS     T
Sbjct: 61  ETSNMLETT 69


>ref|WP_010527116.1| ribonuclease H [Thermophagus xiamenensis]
          Length = 208

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = -2

Query: 770 MGKKKAYVVFNGRNTGVTQSWPECSDAVNGYSRNCYKGYSSTKEAERAWETYEKSTDVYG 591
           M KKK YV++ G  TG+  SW EC+  ++G+    YK Y S +EA+RA+ +Y   T+  G
Sbjct: 1   MPKKKYYVIWVGHKTGIVDSWEECNKRIHGFKGARYKSYKSLEEAKRAYASYR--TENIG 58

Query: 590 STSQQFS 570
           ST   ++
Sbjct: 59  STQHSYT 65


>ref|XP_006437374.1| hypothetical protein CICLE_v10033861mg [Citrus clementina]
           gi|557539570|gb|ESR50614.1| hypothetical protein
           CICLE_v10033861mg [Citrus clementina]
          Length = 124

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 27/63 (42%), Positives = 35/63 (55%)
 Frame = -2

Query: 770 MGKKKAYVVFNGRNTGVTQSWPECSDAVNGYSRNCYKGYSSTKEAERAWETYEKSTDVYG 591
           M  +  YVVF G+  G+  SWPEC   VNG+  N YK Y+S  +AE A+  Y K  +   
Sbjct: 1   MPTQSCYVVFKGQKQGIYNSWPECQMQVNGFKGNSYKSYTSLLDAEIAYNDYIKRHEKLP 60

Query: 590 STS 582
            TS
Sbjct: 61  ETS 63


>ref|XP_006427911.1| hypothetical protein CICLE_v10026935mg [Citrus clementina]
           gi|557529901|gb|ESR41151.1| hypothetical protein
           CICLE_v10026935mg [Citrus clementina]
          Length = 124

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 27/69 (39%), Positives = 35/69 (50%)
 Frame = -2

Query: 770 MGKKKAYVVFNGRNTGVTQSWPECSDAVNGYSRNCYKGYSSTKEAERAWETYEKSTDVYG 591
           M  +  YVVF GR  G+  SWPEC   VNG+  N YK Y+S  + + A+  Y K  +   
Sbjct: 1   MPTQSCYVVFKGRKPGIYNSWPECQMQVNGFKGNSYKSYTSLLDVKIAYNDYIKRHENLP 60

Query: 590 STSQQFSGT 564
            TS     T
Sbjct: 61  KTSNMLENT 69


Top