BLASTX nr result
ID: Rauwolfia21_contig00004521
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00004521
(797 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356280.1| PREDICTED: B3 domain-containing protein REM9... 86 1e-14
ref|XP_004237741.1| PREDICTED: B3 domain-containing protein REM9... 85 3e-14
ref|XP_004306899.1| PREDICTED: B3 domain-containing protein REM9... 76 2e-11
ref|XP_004306898.1| PREDICTED: B3 domain-containing protein REM9... 76 2e-11
ref|XP_004306894.1| PREDICTED: B3 domain-containing protein REM9... 76 2e-11
ref|XP_004306893.1| PREDICTED: B3 domain-containing protein REM9... 76 2e-11
ref|XP_002510290.1| conserved hypothetical protein [Ricinus comm... 65 3e-08
ref|XP_004243797.1| PREDICTED: B3 domain-containing transcriptio... 58 4e-06
ref|XP_003589270.1| B3 domain-containing protein [Medicago trunc... 57 1e-05
>ref|XP_006356280.1| PREDICTED: B3 domain-containing protein REM9-like [Solanum
tuberosum]
Length = 255
Score = 85.9 bits (211), Expect = 1e-14
Identities = 42/124 (33%), Positives = 72/124 (58%)
Frame = +3
Query: 6 VKRNKREPGEGTASYQHKNAYFQMTLHKYNVRQRSPFVYIPAAFLKSTDLSDKIAVTLIN 185
+++ K E + ++ F + +YNVR+RSP+++IP F +S L +TL
Sbjct: 133 IEKRKLEGDQPHYQCMKGSSEFTARIKEYNVRKRSPYMHIPTEFCQSNALFQNTTMTLTG 192
Query: 186 PSGDAWQVELQVRNKSGRSASRTVMTKGWDNFVKANKLKVGDICVFKLNHSLERTNNAVM 365
PSG + V L++ N G +T+GW +F +NKLKVGD+C+F+L+ S +N+ +
Sbjct: 193 PSGKSCPVSLRICN--GGKTLYACITRGWHDFFSSNKLKVGDVCIFQLDRSKSDSNSIAI 250
Query: 366 DVQI 377
DV++
Sbjct: 251 DVRV 254
>ref|XP_004237741.1| PREDICTED: B3 domain-containing protein REM9-like [Solanum
lycopersicum]
Length = 255
Score = 84.7 bits (208), Expect = 3e-14
Identities = 42/124 (33%), Positives = 72/124 (58%)
Frame = +3
Query: 6 VKRNKREPGEGTASYQHKNAYFQMTLHKYNVRQRSPFVYIPAAFLKSTDLSDKIAVTLIN 185
+++ K E + ++ F + +YNVR+RSP+++IP F +S L +TL
Sbjct: 133 IEKRKVEGDQPHYQCMKGSSEFTARIKEYNVRKRSPYMHIPTEFCQSNALFQNTTMTLTG 192
Query: 186 PSGDAWQVELQVRNKSGRSASRTVMTKGWDNFVKANKLKVGDICVFKLNHSLERTNNAVM 365
PSG + V L++ N G +T+GW +F +NKLKVGD+C+F+L+ S +N+ +
Sbjct: 193 PSGKSCPVSLRICN--GGKTLYACITRGWHDFFSSNKLKVGDVCLFQLDRSKSDSNSIAI 250
Query: 366 DVQI 377
DV++
Sbjct: 251 DVRV 254
>ref|XP_004306899.1| PREDICTED: B3 domain-containing protein REM9-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 204
Score = 75.9 bits (185), Expect = 2e-11
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 1/126 (0%)
Frame = +3
Query: 6 VKRNKREPGEGTASYQHKNAYFQMTLHKYNVR-QRSPFVYIPAAFLKSTDLSDKIAVTLI 182
VKR + + EGT +F T+ K + R +R+P++ IP +F+++ ++ K ++TLI
Sbjct: 87 VKRPRDDNLEGT--------HFFRTIMKPSHRDKRNPYMNIPPSFVEANGIAHKSSMTLI 138
Query: 183 NPSGDAWQVELQVRNKSGRSASRTVMTKGWDNFVKANKLKVGDICVFKLNHSLERTNNAV 362
+PS W+V+L+ + R R M +GW F +ANKL D+C+F+L+ + N V
Sbjct: 139 DPSRHHWKVDLKHWKEKKRQ--RVTMARGWTEFYRANKLNDRDVCIFELHQKTAVSKNVV 196
Query: 363 MDVQIC 380
++V+IC
Sbjct: 197 VNVKIC 202
>ref|XP_004306898.1| PREDICTED: B3 domain-containing protein REM9-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 208
Score = 75.9 bits (185), Expect = 2e-11
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 1/126 (0%)
Frame = +3
Query: 6 VKRNKREPGEGTASYQHKNAYFQMTLHKYNVR-QRSPFVYIPAAFLKSTDLSDKIAVTLI 182
VKR + + EGT +F T+ K + R +R+P++ IP +F+++ ++ K ++TLI
Sbjct: 91 VKRPRDDNLEGT--------HFFRTIMKPSHRDKRNPYMNIPPSFVEANGIAHKSSMTLI 142
Query: 183 NPSGDAWQVELQVRNKSGRSASRTVMTKGWDNFVKANKLKVGDICVFKLNHSLERTNNAV 362
+PS W+V+L+ + R R M +GW F +ANKL D+C+F+L+ + N V
Sbjct: 143 DPSRHHWKVDLKHWKEKKRQ--RVTMARGWTEFYRANKLNDRDVCIFELHQKTAVSKNVV 200
Query: 363 MDVQIC 380
++V+IC
Sbjct: 201 VNVKIC 206
>ref|XP_004306894.1| PREDICTED: B3 domain-containing protein REM9-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 246
Score = 75.9 bits (185), Expect = 2e-11
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 1/126 (0%)
Frame = +3
Query: 6 VKRNKREPGEGTASYQHKNAYFQMTLHKYNVR-QRSPFVYIPAAFLKSTDLSDKIAVTLI 182
VKR + + EGT +F T+ K + R +R+P++ IP +F+++ ++ K ++TLI
Sbjct: 129 VKRPRDDNLEGT--------HFFRTIMKPSHRDKRNPYMNIPPSFVEANGIAHKSSMTLI 180
Query: 183 NPSGDAWQVELQVRNKSGRSASRTVMTKGWDNFVKANKLKVGDICVFKLNHSLERTNNAV 362
+PS W+V+L+ + R R M +GW F +ANKL D+C+F+L+ + N V
Sbjct: 181 DPSRHHWKVDLKHWKEKKRQ--RVTMARGWTEFYRANKLNDRDVCIFELHQKTAVSKNVV 238
Query: 363 MDVQIC 380
++V+IC
Sbjct: 239 VNVKIC 244
>ref|XP_004306893.1| PREDICTED: B3 domain-containing protein REM9-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 263
Score = 75.9 bits (185), Expect = 2e-11
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 1/126 (0%)
Frame = +3
Query: 6 VKRNKREPGEGTASYQHKNAYFQMTLHKYNVR-QRSPFVYIPAAFLKSTDLSDKIAVTLI 182
VKR + + EGT +F T+ K + R +R+P++ IP +F+++ ++ K ++TLI
Sbjct: 146 VKRPRDDNLEGT--------HFFRTIMKPSHRDKRNPYMNIPPSFVEANGIAHKSSMTLI 197
Query: 183 NPSGDAWQVELQVRNKSGRSASRTVMTKGWDNFVKANKLKVGDICVFKLNHSLERTNNAV 362
+PS W+V+L+ + R R M +GW F +ANKL D+C+F+L+ + N V
Sbjct: 198 DPSRHHWKVDLKHWKEKKRQ--RVTMARGWTEFYRANKLNDRDVCIFELHQKTAVSKNVV 255
Query: 363 MDVQIC 380
++V+IC
Sbjct: 256 VNVKIC 261
>ref|XP_002510290.1| conserved hypothetical protein [Ricinus communis]
gi|223550991|gb|EEF52477.1| conserved hypothetical
protein [Ricinus communis]
Length = 285
Score = 65.1 bits (157), Expect = 3e-08
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Frame = +3
Query: 21 REPGEGTASYQHKNAYFQMTLHKYN-------VRQRSPFV------YIPAAFLKSTDLSD 161
+ P E SY +F T++ N + R F +IP F KS L
Sbjct: 147 KSPLEDAKSYPTNGPHFITTINASNGPDGISYLPDRKEFSCACKLQHIPVEFAKSQKLDR 206
Query: 162 KIAVTLINPSGDAWQVELQVRNKS--GRSASRTVMTKGWDNFVKANKLKVGDICVFKLNH 335
V L + SG W V+L + G+ RT M KGW +F ANKLK GD+C+F+L+
Sbjct: 207 ASIVILRDSSGKLWPVKLCTSDFKFRGKMLKRTAMRKGWLHFYVANKLKKGDVCLFELDL 266
Query: 336 SLERTNNAVMDVQI 377
+ +++ VMDV I
Sbjct: 267 TRKKSYTLVMDVHI 280
>ref|XP_004243797.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Solanum lycopersicum]
Length = 630
Score = 57.8 bits (138), Expect = 4e-06
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +3
Query: 57 KNAYFQMTLHKYNVRQRSPFVYIPAAFLKSTDLSDKIAVTLINPSGDAWQVELQVRNKSG 236
+N YF L KYNV +R+ + IP F++ + L + G+ W+V +R K
Sbjct: 285 ENPYFLQILEKYNV-ERNYILNIPVEFVRKYMPKTSELIELQDTDGNKWKVRC-IRRKL- 341
Query: 237 RSASRTVMTKGWDNFVKANKLKVGDICVFKL 329
R +++KGW NFV N L VGD+CVF+L
Sbjct: 342 ----RVLLSKGWLNFVTDNSLLVGDVCVFEL 368
>ref|XP_003589270.1| B3 domain-containing protein [Medicago truncatula]
gi|355478318|gb|AES59521.1| B3 domain-containing protein
[Medicago truncatula]
Length = 923
Score = 56.6 bits (135), Expect = 1e-05
Identities = 36/109 (33%), Positives = 53/109 (48%)
Frame = +3
Query: 3 LVKRNKREPGEGTASYQHKNAYFQMTLHKYNVRQRSPFVYIPAAFLKSTDLSDKIAVTLI 182
L K + E S+ YF + +NV +R + IP F K + KI +TL
Sbjct: 565 LSKLSPHAEKEIAQSFTSSFPYFVKIMKTFNV-ERPRILNIPYEFSKDHLPNCKIKITLH 623
Query: 183 NPSGDAWQVELQVRNKSGRSASRTVMTKGWDNFVKANKLKVGDICVFKL 329
N G+ W V R + S ++ GW NFV+ N LK+GD+C+F+L
Sbjct: 624 NLKGEQWTVNSVPRTRLHASH---ILCGGWLNFVRGNSLKIGDVCIFEL 669