BLASTX nr result
ID: Rauwolfia21_contig00004050
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00004050 (788 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39675.3| unnamed protein product [Vitis vinifera] 88 4e-15 ref|XP_006382257.1| hypothetical protein POPTR_0005s00400g [Popu... 59 2e-06 gb|AFK48113.1| unknown [Medicago truncatula] 58 4e-06 gb|ACV50425.1| cold induced plasma membrane protein [Jatropha cu... 57 6e-06 >emb|CBI39675.3| unnamed protein product [Vitis vinifera] Length = 113 Score = 87.8 bits (216), Expect = 4e-15 Identities = 40/60 (66%), Positives = 44/60 (73%) Frame = +1 Query: 244 KNARRRYSYLHRHSLGNHLASPWCLPQIWLPGRVLDLFVADHTWLHSRNHLCYLCHHQVI 423 K S+LHRHSLG+HLA PWCLPQ+W+PG VLDLF AD L S N LC LCHHQVI Sbjct: 38 KTREENGSHLHRHSLGHHLAPPWCLPQVWMPGGVLDLFGADFFRLPSWNCLCCLCHHQVI 97 >ref|XP_006382257.1| hypothetical protein POPTR_0005s00400g [Populus trichocarpa] gi|566168547|ref|XP_006382258.1| hypothetical protein POPTR_0005s00400g [Populus trichocarpa] gi|550337609|gb|ERP60054.1| hypothetical protein POPTR_0005s00400g [Populus trichocarpa] gi|550337610|gb|ERP60055.1| hypothetical protein POPTR_0005s00400g [Populus trichocarpa] Length = 106 Score = 58.9 bits (141), Expect = 2e-06 Identities = 31/62 (50%), Positives = 41/62 (66%) Frame = -2 Query: 415 GDGINSIDDSGNVTKYGQQQTDPELCLAAKFEEDTKGRQDDCQENVYAGSCTFFWHFFSL 236 GDG++SI++S V K G +T P AAK EEDTK RQDD Q++VYA SC+ H + Sbjct: 16 GDGVDSINNSREVAKEGYGRTYP----AAKLEEDTKRRQDDGQQDVYASSCSLVCHLLNS 71 Query: 235 SK 230 S+ Sbjct: 72 SE 73 >gb|AFK48113.1| unknown [Medicago truncatula] Length = 59 Score = 57.8 bits (138), Expect = 4e-06 Identities = 26/52 (50%), Positives = 34/52 (65%) Frame = +1 Query: 271 LHRHSLGNHLASPWCLPQIWLPGRVLDLFVADHTWLHSRNHLCYLCHHQVID 426 +HR+ +H S CLPQ+WLP VL LF + WL N LCYLC++QVI+ Sbjct: 1 MHRYHCCHHPPSSRCLPQVWLPCGVLALFGTNPFWLSPWNSLCYLCYYQVIN 52 >gb|ACV50425.1| cold induced plasma membrane protein [Jatropha curcas] Length = 57 Score = 57.4 bits (137), Expect = 6e-06 Identities = 26/40 (65%), Positives = 27/40 (67%) Frame = +2 Query: 248 MPEEGTATCXXXXXXXXXXXXGVFLKFGCQAEFWICLLLT 367 MP EGTATC GVFLKFGC+AEFWICLLLT Sbjct: 1 MPSEGTATCIDILLAVILPPLGVFLKFGCKAEFWICLLLT 40