BLASTX nr result

ID: Rauwolfia21_contig00004050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00004050
         (788 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39675.3| unnamed protein product [Vitis vinifera]               88   4e-15
ref|XP_006382257.1| hypothetical protein POPTR_0005s00400g [Popu...    59   2e-06
gb|AFK48113.1| unknown [Medicago truncatula]                           58   4e-06
gb|ACV50425.1| cold induced plasma membrane protein [Jatropha cu...    57   6e-06

>emb|CBI39675.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 40/60 (66%), Positives = 44/60 (73%)
 Frame = +1

Query: 244 KNARRRYSYLHRHSLGNHLASPWCLPQIWLPGRVLDLFVADHTWLHSRNHLCYLCHHQVI 423
           K      S+LHRHSLG+HLA PWCLPQ+W+PG VLDLF AD   L S N LC LCHHQVI
Sbjct: 38  KTREENGSHLHRHSLGHHLAPPWCLPQVWMPGGVLDLFGADFFRLPSWNCLCCLCHHQVI 97


>ref|XP_006382257.1| hypothetical protein POPTR_0005s00400g [Populus trichocarpa]
           gi|566168547|ref|XP_006382258.1| hypothetical protein
           POPTR_0005s00400g [Populus trichocarpa]
           gi|550337609|gb|ERP60054.1| hypothetical protein
           POPTR_0005s00400g [Populus trichocarpa]
           gi|550337610|gb|ERP60055.1| hypothetical protein
           POPTR_0005s00400g [Populus trichocarpa]
          Length = 106

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 31/62 (50%), Positives = 41/62 (66%)
 Frame = -2

Query: 415 GDGINSIDDSGNVTKYGQQQTDPELCLAAKFEEDTKGRQDDCQENVYAGSCTFFWHFFSL 236
           GDG++SI++S  V K G  +T P    AAK EEDTK RQDD Q++VYA SC+   H  + 
Sbjct: 16  GDGVDSINNSREVAKEGYGRTYP----AAKLEEDTKRRQDDGQQDVYASSCSLVCHLLNS 71

Query: 235 SK 230
           S+
Sbjct: 72  SE 73


>gb|AFK48113.1| unknown [Medicago truncatula]
          Length = 59

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = +1

Query: 271 LHRHSLGNHLASPWCLPQIWLPGRVLDLFVADHTWLHSRNHLCYLCHHQVID 426
           +HR+   +H  S  CLPQ+WLP  VL LF  +  WL   N LCYLC++QVI+
Sbjct: 1   MHRYHCCHHPPSSRCLPQVWLPCGVLALFGTNPFWLSPWNSLCYLCYYQVIN 52


>gb|ACV50425.1| cold induced plasma membrane protein [Jatropha curcas]
          Length = 57

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 26/40 (65%), Positives = 27/40 (67%)
 Frame = +2

Query: 248 MPEEGTATCXXXXXXXXXXXXGVFLKFGCQAEFWICLLLT 367
           MP EGTATC            GVFLKFGC+AEFWICLLLT
Sbjct: 1   MPSEGTATCIDILLAVILPPLGVFLKFGCKAEFWICLLLT 40


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