BLASTX nr result
ID: Rauwolfia21_contig00003583
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00003583
(2338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g... 688 0.0
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr... 683 0.0
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera] 677 0.0
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g... 676 0.0
gb|EOY04202.1| RNA-binding KH domain-containing protein isoform ... 634 e-179
ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g... 634 e-179
gb|EOY04205.1| RNA-binding KH domain-containing protein isoform ... 633 e-178
ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g... 620 e-175
ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g... 613 e-172
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr... 588 e-165
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ... 585 e-164
gb|EOY04206.1| RNA-binding KH domain-containing protein isoform ... 584 e-164
gb|EOY04203.1| RNA-binding KH domain-containing protein isoform ... 584 e-164
gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [... 581 e-163
ref|XP_002329331.1| predicted protein [Populus trichocarpa] gi|5... 548 e-153
gb|AEV43362.1| poly C-binding protein [Citrus sinensis] 506 e-140
gb|EOY04207.1| RNA-binding KH domain-containing protein isoform ... 442 e-121
ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g... 362 3e-97
gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa... 352 4e-94
ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g... 352 4e-94
>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
product [Vitis vinifera]
Length = 676
Score = 688 bits (1775), Expect = 0.0
Identities = 389/677 (57%), Positives = 456/677 (67%), Gaps = 20/677 (2%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAVKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXXXX 419
ME R FKKRPN +FK KG+ K+G+W +S EQS +S ++TVYRILC
Sbjct: 1 MEGTRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVI 60
Query: 420 XXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQ-TXXXXXXXXXXXXM 596
ALREETQAKITVADSVPGSDERVI+I S TK + + M
Sbjct: 61 GKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQDHM 120
Query: 597 EPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNE-IVVTARLLVPNNIVGCLLGKKGDVIQ 770
EP+C AQDAL+KVH+RI+EED+ GG DDNE VVTARLLVPNN+VGCLLGK+GDVIQ
Sbjct: 121 EPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQ 180
Query: 771 RLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKPPL 950
RLRSET ANIRVLPA+HLP+CA+SSDELVQISGKPA+AKKALYEVSTLLHQNPRKDKPP
Sbjct: 181 RLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPS 240
Query: 951 SFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQG-RPMPWAERFGNQPSAFGPGE 1127
SFP++ G Q FHPPG + NM P N WS N N QG PMPW + +QPS PG
Sbjct: 241 SFPMSFGGQGFHPPGAS-MGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVV-PGG 298
Query: 1128 FDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLESDE 1307
FDG GGEA EFSMKILC +QLQQETGASI VE+ ES+E
Sbjct: 299 FDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEE 358
Query: 1308 RVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGHVI 1487
RVIRVSS E LW+PRSQT++AIL LQNKTSE ++KG +TTRLLVPSSKVGCILGQGGHVI
Sbjct: 359 RVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGHVI 418
Query: 1488 NEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDASA 1667
NEMRRRTQADIRV+SKEDKPKCASDDEELVQISGN+ V KDALAEIASRLR RCLRDA+
Sbjct: 419 NEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDANG 478
Query: 1668 KGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGGEYEPQSYPGPPTAI 1847
E AP+ PV S G +E KGGG EYEPQSYP PP A
Sbjct: 479 GVEPAPVGPVPGFGHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPPAAT 538
Query: 1848 GYPGI--SGDRRIRNDIADSYVGAG---ASNMDEIVRTRMKLHGHHAGGSERLVDIRRSP 2012
GY + S + +I N+ S +G G +NM E+ R+KL +GGSE +V+IR S
Sbjct: 539 GYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSS 598
Query: 2013 HHLSASQDMFQPFGSSA---GHNSHTPRAPYQSYNAR-QAVHQNINP----SFQNFSPSP 2168
HL+A+Q + Q F +SA G N + + YQ+ +A QA +QN+N +Q+ + P
Sbjct: 599 EHLTAAQSILQAFMASAGAGGQNMNPQQGSYQNMSAHPQAPYQNMNAPPQVPYQSMNAPP 658
Query: 2169 ---APYQNILTQQAPYQ 2210
A Y N+ QQ+ YQ
Sbjct: 659 QQAAAYPNMSAQQSSYQ 675
>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532838|gb|ESR44021.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 710
Score = 683 bits (1762), Expect = 0.0
Identities = 376/678 (55%), Positives = 457/678 (67%), Gaps = 14/678 (2%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAV--KKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXX 413
M+A++ +FFKKRPN +FK KG V KKG W +S EQS +S ++TVYRILC
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 414 XXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXX 593
+LREETQAKITVAD++PGS+ERVI+I S TKIA+ Q
Sbjct: 61 VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120
Query: 594 -MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNE-IVVTARLLVPNNIVGCLLGKKGDV 764
MEP+CAAQDALLKVHDRI+EED+ GG ++DDNE VTARLLVPNN+VGCLLGK+GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180
Query: 765 IQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKP 944
IQRLRSET ANIRVLPAD LP CA+++DELVQISGKP +AK+ALYEVSTLLHQNPRKDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240
Query: 945 PLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRPM-PWAERFGNQPSAFGP 1121
P SFP A+G Q+FH P P P+A+M P NS+W N + G P PW +G+QPS G
Sbjct: 241 PSSFPQAYGGQNFHSP-PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS 299
Query: 1122 GEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLES 1301
G + P + GE EFSMKILC +QLQQETGASI VE+ +S
Sbjct: 300 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 359
Query: 1302 DERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGH 1481
DERVIR S+ E LW+PRSQT+DAIL LQNKTSE +EKG ITTRLLVPSSKVGCILGQGGH
Sbjct: 360 DERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGH 419
Query: 1482 VINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDA 1661
VINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ V KDAL EIASRLR R LRDA
Sbjct: 420 VINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDA 479
Query: 1662 SAKGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGGEYEPQSYPGPPT 1841
+ E AP+ PV G YE F+ GG +YEPQSYP PP+
Sbjct: 480 NVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFR-GGYDYEPQSYPPPPS 538
Query: 1842 AIGYPGISG--DRRIRNDIADSYVGAGAS---NMDEIVRTRMKLHGHHAGGSERLVDIRR 2006
A+GYP ++ + RI N S +G G S N+ E+ R+KL H G SE +VDIR
Sbjct: 539 AMGYPNMNSAFEARIPNKAVGSVMGTGGSNIPNVGEVAGARVKLQDPHPGSSECIVDIRG 598
Query: 2007 SPHHLSASQDMFQPFGSSAGHNSHTPRAPYQSYNARQAVHQNIN---PSFQNFSPSPAPY 2177
S HL ++ +Q F +S G + + YQ+ N +Q+ +Q ++ S+QN + +PY
Sbjct: 599 SSEHLISAHGTYQSFMTS-GQSMKVQPSSYQNINPQQSSYQTMSSHQSSYQNMNTQQSPY 657
Query: 2178 QNILTQQAPYQKISAHGS 2231
++ QQ+PYQ I+ S
Sbjct: 658 HSVNAQQSPYQNINPQQS 675
>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 677 bits (1748), Expect = 0.0
Identities = 384/660 (58%), Positives = 443/660 (67%), Gaps = 13/660 (1%)
Frame = +3
Query: 237 TMEANRNHFFKKRPNPEFKAKGAVKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXXX 416
+ME R FKKRPN +FK KG+ K+G+W +S EQS +S ++TVYRILC
Sbjct: 28 SMEGXRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGV 87
Query: 417 XXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQ-TXXXXXXXXXXXX 593
ALREETQAKITVADSVPGSDERVI+I S TK + +
Sbjct: 88 IGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEEQDH 147
Query: 594 MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNE-IVVTARLLVPNNIVGCLLGKKGDVI 767
MEP+C AQDAL+KVH+RI+EED+ GG DDNE VVTARLLVPNN+VGCLLGK+GDVI
Sbjct: 148 MEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVI 207
Query: 768 QRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKPP 947
QRLRSET ANIRVLPA+HLP+CA+SSDELVQISGKPA+AKKALYEVSTLLHQNPRKDKPP
Sbjct: 208 QRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPP 267
Query: 948 LSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQG-RPMPWAERFGNQPSAFGPG 1124
SFP++ G Q FHPPG + NM P N WS N N QG PMPW + +QPS PG
Sbjct: 268 SSFPMSFGGQGFHPPGAS-MGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVV-PG 325
Query: 1125 EFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLESD 1304
FDG GGEA EFSMKILC +QLQQETGASI VE+ ES+
Sbjct: 326 GFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESE 385
Query: 1305 ERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGHV 1484
ERVIRVSS E LW+PRSQT++AIL LQNKTSE ++KG +TTRLLVPSSKVGCILGQGGHV
Sbjct: 386 ERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGHV 445
Query: 1485 INEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDAS 1664
INEMRRRTQADIRV+SKEDKPKCASDDEELVQISGN+ V KDALAEIASRLR RCLRDA+
Sbjct: 446 INEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDAN 505
Query: 1665 AKGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGGEYEPQSYPGPPTA 1844
E AP+ PV S G +E KGGG EYEPQSYP PP A
Sbjct: 506 GGVEPAPVGPVPGFGHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPPAA 565
Query: 1845 IGYPGI--SGDRRIRNDIADSYVGAG---ASNMDEIVRTRMKLHGHHAGGSERLVDIRRS 2009
GY + S + +I N+ S +G G +NM E+ R+KL +GGSE +V+IR S
Sbjct: 566 TGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGS 625
Query: 2010 PHHLSASQDMFQPFGSSAGHNSHTPRAPYQSYNARQAVHQNINP---SFQNFSPSP-APY 2177
HL+A+Q + Q F +SAG A QN+NP S+QN S P APY
Sbjct: 626 SEHLTAAQSILQAFMASAG-----------------AGGQNMNPQQGSYQNMSAHPQAPY 668
>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
Length = 715
Score = 676 bits (1745), Expect = 0.0
Identities = 376/683 (55%), Positives = 457/683 (66%), Gaps = 19/683 (2%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAV--KKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXX 413
M+A++ +FFKKRPN +FK KG V KKG W +S EQS +S ++TVYRILC
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 414 XXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARR-QTXXXXXXXXXXX 590
+LREETQAKITVAD++PGS+ERVI+I S TKIA++
Sbjct: 61 VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKKVNKDDDSAAETKKE 120
Query: 591 XMEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNE-IVVTARLLVPNNIVGCLLGKKGDV 764
MEP+CAAQDALLKVHDRI+EED+ GG ++DDNE VTARLLVPNN+VGCLLGK+GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180
Query: 765 IQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKP 944
IQRLRSET ANIRVLPAD LP CA+++DELVQISGKP +AK+ALYEVSTLLHQNPRKDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240
Query: 945 PLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRPM-PWAERFGNQPSAFGP 1121
P SFP A+G Q+FH P P P+A+M P NS+W N + G P PW +G+QPS G
Sbjct: 241 PSSFPQAYGGQNFHSP-PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS 299
Query: 1122 GEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLES 1301
G + P + GE EFSMKILC +QLQQETGASI VE+ +S
Sbjct: 300 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 359
Query: 1302 DERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGH 1481
DERVIR S+ E LW+PRSQT+DAIL LQNKTSE +EKG ITTRLLVPSSKVGCILGQGGH
Sbjct: 360 DERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGH 419
Query: 1482 VINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDA 1661
VINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ V KDAL EIASRLR R LRDA
Sbjct: 420 VINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDA 479
Query: 1662 SAKGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGGEYEPQSYP---- 1829
+ E AP+ PV G YE F+ GG +YEPQSYP
Sbjct: 480 NVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISGGYEPFR-GGYDYEPQSYPPPPS 538
Query: 1830 -GPPTAIGYPGISG--DRRIRNDIADSYVGAGAS---NMDEIVRTRMKLHGHHAGGSERL 1991
PP+A GYP ++ + RI N S +G G S N+ E+V R+KL H G SE +
Sbjct: 539 APPPSATGYPNMNSAFEARIPNKAVGSVMGTGGSNIPNVGEVVGARVKLQDPHPGSSECI 598
Query: 1992 VDIRRSPHHLSASQDMFQPFGSSAGHNSHTPRAPYQSYNARQAVHQNIN---PSFQNFSP 2162
VDIR S HL ++ +Q F +S G + + YQ+ N +Q+ +Q ++ S+QN +
Sbjct: 599 VDIRGSSEHLISAHGTYQSFMTS-GQSMKVQPSSYQNINPQQSSYQTMSSHQSSYQNMNT 657
Query: 2163 SPAPYQNILTQQAPYQKISAHGS 2231
+PY ++ QQ+PYQ I+ S
Sbjct: 658 QQSPYHSVNAQQSPYQNINPQQS 680
>gb|EOY04202.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao]
gi|508712307|gb|EOY04204.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
Length = 706
Score = 634 bits (1636), Expect = e-179
Identities = 364/685 (53%), Positives = 444/685 (64%), Gaps = 18/685 (2%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAV--KKGKW-QDSGLEQSLEDSHTSETVYRILCQXXXXX 410
M+ + +F KK N FK KG +K KW +SG EQ + ++ +TVYR+LC
Sbjct: 1 MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60
Query: 411 XXXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXX 590
ALREETQAKITV DSV G DERVI+I S K+ + +
Sbjct: 61 GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120
Query: 591 X---MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDN-EIVVTARLLVPNNIVGCLLGKK 755
MEP CAAQDALLKVHD+I E+D+ GG +DDN VVTARLLVPNN+VGCLLGK+
Sbjct: 121 EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180
Query: 756 GDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRK 935
GDVIQRLRSET A+IR+LPADHLP+CA+++DELVQISGK +AK+ALYEVSTLLHQNPRK
Sbjct: 181 GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240
Query: 936 DKPPLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRP-MPWAERFGNQPSA 1112
D PPLSFP+ H Q+F PP + +P +N WS N + P MPW GN+PS
Sbjct: 241 DNPPLSFPVPHAGQNFPPP------SAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSG 294
Query: 1113 FGPGEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVS 1292
FGPG FP RG EA EFSMKILC +QLQQETGA I VE+ +
Sbjct: 295 FGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDAT 354
Query: 1293 LESDERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQ 1472
+ESDERVIRVS++E LW+PRSQT+DAIL LQNKTSE +EKG +TTRLLVPSSKVGCILGQ
Sbjct: 355 IESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQ 414
Query: 1473 GGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCL 1652
GGHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ V KDALAEIASRLR R L
Sbjct: 415 GGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTL 474
Query: 1653 RDASAKGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGG-EYEPQ-SY 1826
RD +A ETAP+ PV S G YE F+GGGG EYEPQ +Y
Sbjct: 475 RDVNAGAETAPVGPVNGFGPARSMADGLPPAAAIGPGRS-GGYESFRGGGGREYEPQNNY 533
Query: 1827 PGPPTAIGYPGISG--DRRIRNDIADSYVGAGASNM--DEIVRTRMKLHGHHAGGSERLV 1994
PP A+ Y ++G + +I N+++ S G G S + E+ R++L GGSE
Sbjct: 534 SVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTILNSEVSGARVRLEDPQTGGSE--- 590
Query: 1995 DIRRSPHHLSASQDMFQPFGSSAGHNSHTPRAPYQSYNARQAVHQNIN---PSFQNFSPS 2165
+ R S HL+A+Q +FQ F S+G QS NA+Q+ +QN++ S+ N +
Sbjct: 591 EFRGSSEHLTAAQSIFQSFMPSSG----------QSMNAQQSSYQNLSVQQSSYLNMNAQ 640
Query: 2166 PAPYQNILTQQAPYQKISAHGSFRY 2240
+PY N+ QQ+PYQ H S Y
Sbjct: 641 RSPYPNMNAQQSPYQNRHPHQSSPY 665
>ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Solanum tuberosum] gi|565383832|ref|XP_006358054.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Solanum tuberosum]
Length = 705
Score = 634 bits (1634), Expect = e-179
Identities = 355/706 (50%), Positives = 446/706 (63%), Gaps = 39/706 (5%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAVKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXXXX 419
M+ + + K+R NP+FK KG K K S E+S E+S +S+T Y ILCQ
Sbjct: 1 MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60
Query: 420 XXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXX-- 593
ALREETQAKITVADSVPGSD+R++++ SPSTK+ARRQ
Sbjct: 61 GKGGSIIKALREETQAKITVADSVPGSDDRIVIVSSPSTKLARRQNNDKNNDNPETKEEN 120
Query: 594 --MEPYCAAQDALLKVHDRIVEEDIGGAGNNDDNEIVVTARLLVPNNIVGCLLGKKGDVI 767
MEP+CAAQDALLKVH+RIVEED+ G N D +E V+ RLLVPNN+VGCLLG+KGDVI
Sbjct: 121 CSMEPHCAAQDALLKVHNRIVEEDLQGVQNEDKSETVIITRLLVPNNLVGCLLGRKGDVI 180
Query: 768 QRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKPP 947
Q+LRSET A+IRVL A+HLP+CA+++DELVQISGKPA+ KKALYEVSTLLHQNPRKDKP
Sbjct: 181 QKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPI 240
Query: 948 LSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGR-PMPWAERFGNQPSAFGPG 1124
SFP+ HG Q FHPPGPP + NM+P WS+ N G P + NQ + FG
Sbjct: 241 SSFPMVHGAQGFHPPGPP-MENMIPPGKPMWSQSKTNLNGMSPALGVGGYRNQLTGFGRA 299
Query: 1125 EFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLESD 1304
+FD P P GEAP +F+MKILC +QLQQ+TGA I VE+V+ ESD
Sbjct: 300 DFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQDTGAGIHVEDVAPESD 359
Query: 1305 ERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGHV 1484
ERVIRVSS+E WDPRS+T+DAIL LQ+KTSE ++KGI+TTRLL PS+KVGCI+GQGG V
Sbjct: 360 ERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCIIGQGGQV 419
Query: 1485 INEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDAS 1664
INEMRRRTQADIRV SK+DKP+CAS DEELVQISG+ V KDAL EI+SRLR RCLRDA+
Sbjct: 420 INEMRRRTQADIRVLSKDDKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDAN 479
Query: 1665 AKGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGGEYEPQSYPGPPTA 1844
+K E+ P+RP+ S RYEH KG EY+ SYP P A
Sbjct: 480 SKVESTPVRPLPGFVPSEDFRSGDPQRSGAMGAGSSRRYEHLKGAVREYDHPSYPDLPIA 539
Query: 1845 IGYPGISG--DRRIRNDIADSYVGAGASNMDEIVRTRMKLHGHHAGGSERLVDIRRSPHH 2018
+ I + + + S G G N+DE + + G + DIR + H
Sbjct: 540 TRFSNIRSPPEMKFPDHSYGSAKGTGGYNIDEFAGRSARFQDPRSVGPGFIDDIRGTSDH 599
Query: 2019 LSASQDM--------------FQPFGSSAGHNSHTPRAPY-QSYNARQAVHQNI------ 2135
++A ++ FQ +GS AG +S+ + Y Q+Y A+Q+ +Q+
Sbjct: 600 MNAGHNVFHGSSENFNAGRPTFQGYGSPAGQSSNIQQGAYHQNYAAQQSAYQSYPAKGGY 659
Query: 2136 ---NPS---FQNFSPSPAPYQNILTQQ-----APYQKISAHGSFRY 2240
+PS +QN +P APYQNI +QQ PYQ ++A GS+ Y
Sbjct: 660 PSGSPSQLPYQNPNPHQAPYQNINSQQHQQAPPPYQNMAAQGSYHY 705
>gb|EOY04205.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma cacao]
Length = 706
Score = 633 bits (1632), Expect = e-178
Identities = 363/685 (52%), Positives = 444/685 (64%), Gaps = 18/685 (2%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAV--KKGKW-QDSGLEQSLEDSHTSETVYRILCQXXXXX 410
M+ + +F KK N FK KG +K KW +SG EQ + ++ +TVYR+LC
Sbjct: 1 MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60
Query: 411 XXXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXX 590
ALREETQAKITV DSV G DERVI+I S K+ + +
Sbjct: 61 GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120
Query: 591 X---MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDN-EIVVTARLLVPNNIVGCLLGKK 755
MEP CAAQDALLKVHD+I E+D+ GG +DDN VVTARLLVPNN+VGCLLGK+
Sbjct: 121 EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180
Query: 756 GDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRK 935
GDVIQRLRSET A+IR+LPADHLP+CA+++DELVQISGK +AK+ALYEVSTLLHQNPRK
Sbjct: 181 GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240
Query: 936 DKPPLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRP-MPWAERFGNQPSA 1112
D PPLSFP+ H Q+F PP + +P +N WS N + P MPW GN+PS
Sbjct: 241 DNPPLSFPVPHAGQNFPPP------SAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSG 294
Query: 1113 FGPGEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVS 1292
FGPG FP RG EA EFSMKILC +QLQQETGA I VE+ +
Sbjct: 295 FGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDAT 354
Query: 1293 LESDERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQ 1472
+ESDERVIRVS++E LW+PRSQT+DAIL LQNKTSE +EKG +TTRLLVPSSKVGCILGQ
Sbjct: 355 IESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQ 414
Query: 1473 GGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCL 1652
GGHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ V KDALAEIASRLR R L
Sbjct: 415 GGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTL 474
Query: 1653 RDASAKGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGG-EYEPQ-SY 1826
RD +A ETAP+ PV S G YE F+GGGG EYEPQ +Y
Sbjct: 475 RDVNAGAETAPVGPVNGFGPARSMADGLPPAAAIGPGRS-GGYESFRGGGGREYEPQNNY 533
Query: 1827 PGPPTAIGYPGISG--DRRIRNDIADSYVGAGASNM--DEIVRTRMKLHGHHAGGSERLV 1994
PP A+ Y ++G + +I N+++ S G G S + ++ R++L GGSE
Sbjct: 534 SVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTILNTQVSGARVRLEDPQTGGSE--- 590
Query: 1995 DIRRSPHHLSASQDMFQPFGSSAGHNSHTPRAPYQSYNARQAVHQNIN---PSFQNFSPS 2165
+ R S HL+A+Q +FQ F S+G QS NA+Q+ +QN++ S+ N +
Sbjct: 591 EFRGSSEHLTAAQSIFQSFMPSSG----------QSMNAQQSSYQNLSVQQSSYLNMNAQ 640
Query: 2166 PAPYQNILTQQAPYQKISAHGSFRY 2240
+PY N+ QQ+PYQ H S Y
Sbjct: 641 RSPYPNMNAQQSPYQNRHPHQSSPY 665
>ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 707
Score = 620 bits (1599), Expect = e-175
Identities = 353/708 (49%), Positives = 443/708 (62%), Gaps = 41/708 (5%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAVKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXXXX 419
M+ + + K+R NP+FK KG K K S E+S E+S +S+T Y ILCQ
Sbjct: 1 MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60
Query: 420 XXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXX-- 593
ALREETQAKITVADSVPGSD+R+++I SPSTK+ARRQ
Sbjct: 61 GKGGSIIKALREETQAKITVADSVPGSDDRIVIISSPSTKLARRQNNDKNNDNPETKEEN 120
Query: 594 --MEPYCAAQDALLKVHDRIVEEDIGGAGNNDDNEIVVTARLLVPNNIVGCLLGKKGDVI 767
MEP+CAAQDALLKVH+RIVEED+ G N D +E V+ RLLVPNN+VGCLLG+KGDVI
Sbjct: 121 YSMEPHCAAQDALLKVHNRIVEEDLLGVQNEDKSEAVIITRLLVPNNLVGCLLGRKGDVI 180
Query: 768 QRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKPP 947
Q+LRSET A+IRVL A+HLP+CA+++DELVQISGKPA+ KKALYEVSTLLHQNPRKDKP
Sbjct: 181 QKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPI 240
Query: 948 LSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRPMPWAER-FGNQPSAFGPG 1124
SFP+ HG Q FHPPGPP + NM+P WS+ N G P + NQ + FG
Sbjct: 241 SSFPMVHGAQGFHPPGPP-MENMIPPGKPMWSQSKTNLNGMPPALGVGGYRNQLTGFGRA 299
Query: 1125 EFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLESD 1304
+FD P P GEAP +F+MKILC +QLQQETGA I VE+V+ ESD
Sbjct: 300 DFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQETGAGIHVEDVAPESD 359
Query: 1305 ERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGHV 1484
ERVIRVSS+E WDPRS+T+DAIL LQ+KTSE ++KGI+TTRLL PS+KVGCI+GQGG V
Sbjct: 360 ERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCIIGQGGQV 419
Query: 1485 INEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDAS 1664
INEMRRRTQADIRV SK++KP+CAS DEELVQISG+ V KDAL EI+SRLR RCLRDA+
Sbjct: 420 INEMRRRTQADIRVLSKDEKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDAN 479
Query: 1665 AKGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGGEYEPQSYPGPPTA 1844
+K E+ +RP+ S RYEH KG E + SYP P A
Sbjct: 480 SKVESTHVRPLPGFVPSEDFRSRDPQRSGVMGAGSSRRYEHLKGAVRECDHPSYPDLPIA 539
Query: 1845 IGYPGISG--DRRIRNDIADSYVGAGASNMDEIVRTRMKLHGHHAGGSERLVDIR----- 2003
+ + + + + G G N+DE + + + G + DIR
Sbjct: 540 TRFSNTRSPPEMKFPDHSYGTAKGTGGYNIDEFAGSSARYQDPRSIGPGFVDDIRGTSDR 599
Query: 2004 ---------RSPHHLSASQDMFQPFGSSAGHNSHTPRAPY-QSYNARQAVHQNI------ 2135
S +L+A + FQ +GS AG +S+ + Y Q+Y A+Q+ +Q+
Sbjct: 600 MNAGHNVFHGSSENLNAGRPTFQGYGSPAGQSSNIHQGAYHQNYAAQQSAYQSYPAKGGY 659
Query: 2136 ---NPS---FQNFSPSPAPYQNILTQQ-------APYQKISAHGSFRY 2240
+PS +QN +P APYQNI +QQ PYQ ++A GS+ Y
Sbjct: 660 PSGSPSQLPYQNPNPHQAPYQNINSQQHQHQQAPPPYQNMAAQGSYHY 707
>ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
vesca subsp. vesca]
Length = 760
Score = 613 bits (1581), Expect = e-172
Identities = 348/675 (51%), Positives = 432/675 (64%), Gaps = 9/675 (1%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAV-KKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXXX 416
M+ N+ + +RP +FK KG+ +KG +S EQS ++ + ETVYRILC
Sbjct: 1 MDWNKRNVLSQRPTVQFKRKGSSNQKGNLNNSNREQSSGNAQSLETVYRILCPSKKIGGV 60
Query: 417 XXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQ-TXXXXXXXXXXXX 593
+LREET++KITV+DSVPGSDERVI+I SP TKI+R+Q +
Sbjct: 61 IGKGGGIIKSLREETRSKITVSDSVPGSDERVIIIFSPPTKISRKQNSDEDSHKADEQKP 120
Query: 594 MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNEIVVTARLLVPNNIVGCLLGKKGDVIQ 770
+EP+CAAQDALLKVHDRIVEED+ G +DDNE +V RLLVPNN+VGCLLGK+GDVIQ
Sbjct: 121 LEPHCAAQDALLKVHDRIVEEDLYDGVTFDDDNENIVVTRLLVPNNLVGCLLGKRGDVIQ 180
Query: 771 RLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKPPL 950
RLRSETRANIRVLPAD LP+CA+ +DELVQISGKP +AKKALYEVSTLLHQNPRKDKPPL
Sbjct: 181 RLRSETRANIRVLPADQLPTCAMDTDELVQISGKPDVAKKALYEVSTLLHQNPRKDKPPL 240
Query: 951 SFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRPMPWAERFGNQPSAFGPGEF 1130
+ G Q FH G P NM P N W P+ PMPW N S +G G F
Sbjct: 241 GLAIPFGGQGFHLRGAP---NMFPPGNPIWPNREPSHGMPPMPWIGECENHSSGYGRGGF 297
Query: 1131 DGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLESDER 1310
DG P G EA EF +KILC +QLQ+ETGA+I V++ S +S+ER
Sbjct: 298 DGDPAGHGVEASAEFFIKILCSAGKIGGVIGKGGFNVKQLQEETGANIHVQDASTDSEER 357
Query: 1311 VIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGHVIN 1490
VIRVS+ EVL PRSQT++AIL LQNK SEL++KG ITTRLLVPSSKVGCILGQGG VIN
Sbjct: 358 VIRVSAFEVLRIPRSQTIEAILQLQNKASELSDKGTITTRLLVPSSKVGCILGQGGQVIN 417
Query: 1491 EMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDASAK 1670
EMRRRTQADIRV+SK+D+PKCA +DEELVQISGN+AV KDALAEI SRLR R LRD +A
Sbjct: 418 EMRRRTQADIRVYSKDDRPKCADEDEELVQISGNFAVAKDALAEITSRLRIRTLRDTNAG 477
Query: 1671 GETAPI-RPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGGEYEPQSYPGPPTAI 1847
E AP+ P S GRY+H K G EYEP+ YP PP A
Sbjct: 478 EEHAPVGPPPRFGPPGSLPVKGMPPPLSAVRAGSSGRYDHLKVGRHEYEPEGYPVPPAAS 537
Query: 1848 GYPGISG--DRRIRNDIADSYVGAGASNMD---EIVRTRMKLHGHHAGGSERLVDIRRSP 2012
GY ++ D RI N+ S+ G G S++ E+ R R+K +GG E++ +IR S
Sbjct: 538 GYQRVNRALDSRIPNNAVGSFTGIGGSDVSHIGEVPRPRVKYQDSQSGGFEQVAEIRGS- 596
Query: 2013 HHLSASQDMFQPFGSSAGHNSHTPRAPYQSYNARQAVHQNINPSFQNFSPSPAPYQNILT 2192
L+A+Q++ Q +S G N+ + + + N RQ S+ N S +PY +I
Sbjct: 597 DQLNAAQNILQALMASMGQNASAQPSSHHNANTRQG-------SYPNISDHQSPY-HINA 648
Query: 2193 QQAPYQKISAHGSFR 2237
++PY+ + +R
Sbjct: 649 PRSPYRVNAPQSPYR 663
>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532839|gb|ESR44022.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 528
Score = 588 bits (1517), Expect = e-165
Identities = 313/492 (63%), Positives = 363/492 (73%), Gaps = 6/492 (1%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAV--KKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXX 413
M+A++ +FFKKRPN +FK KG V KKG W +S EQS +S ++TVYRILC
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 414 XXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXX 593
+LREETQAKITVAD++PGS+ERVI+I S TKIA+ Q
Sbjct: 61 VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120
Query: 594 -MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNE-IVVTARLLVPNNIVGCLLGKKGDV 764
MEP+CAAQDALLKVHDRI+EED+ GG ++DDNE VTARLLVPNN+VGCLLGK+GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180
Query: 765 IQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKP 944
IQRLRSET ANIRVLPAD LP CA+++DELVQISGKP +AK+ALYEVSTLLHQNPRKDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240
Query: 945 PLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRPM-PWAERFGNQPSAFGP 1121
P SFP A+G Q+FH P P P+A+M P NS+W N + G P PW +G+QPS G
Sbjct: 241 PSSFPQAYGGQNFHSP-PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS 299
Query: 1122 GEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLES 1301
G + P + GE EFSMKILC +QLQQETGASI VE+ +S
Sbjct: 300 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 359
Query: 1302 DERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGH 1481
DERVIR S+ E LW+PRSQT+DAIL LQNKTSE +EKG ITTRLLVPSSKVGCILGQGGH
Sbjct: 360 DERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGH 419
Query: 1482 VINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDA 1661
VINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ V KDAL EIASRLR R LRDA
Sbjct: 420 VINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDA 479
Query: 1662 SAKGETAPIRPV 1697
+ E AP+ PV
Sbjct: 480 NVGAEPAPVGPV 491
>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 537
Score = 585 bits (1507), Expect = e-164
Identities = 320/541 (59%), Positives = 367/541 (67%), Gaps = 3/541 (0%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAVKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXXXX 419
M+ N+ + FKK N +FK KG +KGKW +SG E+S + +TVYRILC
Sbjct: 1 MDGNKRNVFKKYQNNQFKRKGVTRKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGGVI 60
Query: 420 XXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXX-M 596
LREETQAKITVAD VPGSDERVI+I S KI+R M
Sbjct: 61 GKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHNDHEDLTMENEQDIM 120
Query: 597 EPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNEI-VVTARLLVPNNIVGCLLGKKGDVIQ 770
EPYCAAQDALLKVHDRIVEED+ GG ++DDNE VTARLLVPNN+VGCLLGK+GDVIQ
Sbjct: 121 EPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDVIQ 180
Query: 771 RLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKPPL 950
RLRSET ANIRVLPADHLP+CA+S+DELVQIS KP +AKKALYEVSTLLHQNPRKDKPP
Sbjct: 181 RLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDKPP- 239
Query: 951 SFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRPMPWAERFGNQPSAFGPGEF 1130
S P+ + Q FHPPG P + N+ P + W HN + PMP R+G+Q S FGPG F
Sbjct: 240 SVPMPYSGQSFHPPGGP-MKNLPPLGSPMWPHHNSSHSIPPMPIMGRYGSQSSGFGPGGF 298
Query: 1131 DGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLESDER 1310
D P E EFSMKILC + +QQ+TGASI VE+ S ESDER
Sbjct: 299 DDVPRGHVAEPSAEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESDER 358
Query: 1311 VIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGHVIN 1490
VIRVS+ E LW+PRSQT+DAIL LQNKTS+ +EKG ITTRLLVPSSKVGCILGQGG VIN
Sbjct: 359 VIRVSASEALWNPRSQTIDAILQLQNKTSDFSEKGTITTRLLVPSSKVGCILGQGGQVIN 418
Query: 1491 EMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDASAK 1670
EMRRRTQADIRV+SK++KPKCAS+DEELVQISG + V KDALAEIASRLR R LRD +A
Sbjct: 419 EMRRRTQADIRVYSKDEKPKCASEDEELVQISGKFGVAKDALAEIASRLRVRTLRDVNAG 478
Query: 1671 GETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGGEYEPQSYPGPPTAIG 1850
E P+ P+ S G YE + EYE SYP PP A+G
Sbjct: 479 AEPGPVGPI--QGFGAARSLPGRGSSGMMGASSSGGYEPLRDTEHEYESHSYPVPPAAVG 536
Query: 1851 Y 1853
Y
Sbjct: 537 Y 537
>gb|EOY04206.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma cacao]
Length = 591
Score = 584 bits (1506), Expect = e-164
Identities = 326/576 (56%), Positives = 388/576 (67%), Gaps = 13/576 (2%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAV--KKGKW-QDSGLEQSLEDSHTSETVYRILCQXXXXX 410
M+ + +F KK N FK KG +K KW +SG EQ + ++ +TVYR+LC
Sbjct: 1 MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60
Query: 411 XXXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXX 590
ALREETQAKITV DSV G DERVI+I S K+ + +
Sbjct: 61 GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120
Query: 591 X---MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDN-EIVVTARLLVPNNIVGCLLGKK 755
MEP CAAQDALLKVHD+I E+D+ GG +DDN VVTARLLVPNN+VGCLLGK+
Sbjct: 121 EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180
Query: 756 GDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRK 935
GDVIQRLRSET A+IR+LPADHLP+CA+++DELVQISGK +AK+ALYEVSTLLHQNPRK
Sbjct: 181 GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240
Query: 936 DKPPLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRP-MPWAERFGNQPSA 1112
D PPLSFP+ H Q+F PP + +P +N WS N + P MPW GN+PS
Sbjct: 241 DNPPLSFPVPHAGQNFPPP------SAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSG 294
Query: 1113 FGPGEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVS 1292
FGPG FP RG EA EFSMKILC +QLQQETGA I VE+ +
Sbjct: 295 FGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDAT 354
Query: 1293 LESDERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQ 1472
+ESDERVIRVS++E LW+PRSQT+DAIL LQNKTSE +EKG +TTRLLVPSSKVGCILGQ
Sbjct: 355 IESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQ 414
Query: 1473 GGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCL 1652
GGHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ V KDALAEIASRLR R L
Sbjct: 415 GGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTL 474
Query: 1653 RDASAKGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGG-EYEPQ-SY 1826
RD +A ETAP+ PV S G YE F+GGGG EYEPQ +Y
Sbjct: 475 RDVNAGAETAPVGPVNGFGPARSMADGLPPAAAIGPGRS-GGYESFRGGGGREYEPQNNY 533
Query: 1827 PGPPTAIGYPGISG--DRRIRNDIADSYVGAGASNM 1928
PP A+ Y ++G + +I N+++ S G G S +
Sbjct: 534 SVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTI 569
>gb|EOY04203.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma cacao]
Length = 580
Score = 584 bits (1506), Expect = e-164
Identities = 326/576 (56%), Positives = 388/576 (67%), Gaps = 13/576 (2%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAV--KKGKW-QDSGLEQSLEDSHTSETVYRILCQXXXXX 410
M+ + +F KK N FK KG +K KW +SG EQ + ++ +TVYR+LC
Sbjct: 1 MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60
Query: 411 XXXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXX 590
ALREETQAKITV DSV G DERVI+I S K+ + +
Sbjct: 61 GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120
Query: 591 X---MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDN-EIVVTARLLVPNNIVGCLLGKK 755
MEP CAAQDALLKVHD+I E+D+ GG +DDN VVTARLLVPNN+VGCLLGK+
Sbjct: 121 EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180
Query: 756 GDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRK 935
GDVIQRLRSET A+IR+LPADHLP+CA+++DELVQISGK +AK+ALYEVSTLLHQNPRK
Sbjct: 181 GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240
Query: 936 DKPPLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRP-MPWAERFGNQPSA 1112
D PPLSFP+ H Q+F PP + +P +N WS N + P MPW GN+PS
Sbjct: 241 DNPPLSFPVPHAGQNFPPP------SAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSG 294
Query: 1113 FGPGEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVS 1292
FGPG FP RG EA EFSMKILC +QLQQETGA I VE+ +
Sbjct: 295 FGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDAT 354
Query: 1293 LESDERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQ 1472
+ESDERVIRVS++E LW+PRSQT+DAIL LQNKTSE +EKG +TTRLLVPSSKVGCILGQ
Sbjct: 355 IESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQ 414
Query: 1473 GGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCL 1652
GGHVINEMRRRTQADIRV+SK+DKPKCAS+DEELVQISGN+ V KDALAEIASRLR R L
Sbjct: 415 GGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTL 474
Query: 1653 RDASAKGETAPIRPVXXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGG-EYEPQ-SY 1826
RD +A ETAP+ PV S G YE F+GGGG EYEPQ +Y
Sbjct: 475 RDVNAGAETAPVGPVNGFGPARSMADGLPPAAAIGPGRS-GGYESFRGGGGREYEPQNNY 533
Query: 1827 PGPPTAIGYPGISG--DRRIRNDIADSYVGAGASNM 1928
PP A+ Y ++G + +I N+++ S G G S +
Sbjct: 534 SVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGSTI 569
>gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica]
Length = 576
Score = 581 bits (1498), Expect = e-163
Identities = 326/575 (56%), Positives = 382/575 (66%), Gaps = 9/575 (1%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGA---VKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXX 410
M+ N+ +FFKKRPN +FK KG KKG W +S EQ LE+ + +TVYRILC
Sbjct: 1 MDGNKRNFFKKRPNVQFKRKGGNNNYKKGNWNNSTREQLLENYQSLDTVYRILCPSKRIG 60
Query: 411 XXXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXX 590
ALREET+AKITVADSV GSDERVI+I S TKI+ +QT
Sbjct: 61 GVIGKGGGIVKALREETRAKITVADSVLGSDERVIIIFSSPTKISSKQTNDGDSSEENEL 120
Query: 591 X-MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNE-IVVTARLLVPNNIVGCLLGKKGD 761
M+P+CAAQDALLKVH+RIVEED+ GG +DDNE VVTARLLVPNN+VGCLLGK GD
Sbjct: 121 EPMDPHCAAQDALLKVHNRIVEEDLFGGVTFDDDNENSVVTARLLVPNNMVGCLLGKGGD 180
Query: 762 VIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDK 941
VIQRLRSET A+IRVLPAD LP+CA+ +DELVQISGKP + K+ALYEVSTLLHQNPRKDK
Sbjct: 181 VIQRLRSETSASIRVLPADQLPTCAMETDELVQISGKPDVTKRALYEVSTLLHQNPRKDK 240
Query: 942 PPLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRPMPWAERFGNQPSAFGP 1121
PP FP+ Q F PPG P + N+LP N WS P+ PMP E +GN S F
Sbjct: 241 PPSGFPMPFWGQGFRPPGAP-MTNVLPPGNPMWSNRAPSHSTAPMPRMEGYGNCSSEFAL 299
Query: 1122 GEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLES 1301
G F+G P GGEA EFSMKILC +QLQ ETGASI V+ S +S
Sbjct: 300 GGFNGVPPGHGGEALAEFSMKILCSPGKIGGVIGKGGFNVKQLQLETGASIHVQEASTDS 359
Query: 1302 DERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGH 1481
+ERVI VS+ E W+P SQT++AIL LQNKTSEL++KGIITTRLLVPSSKVGCILGQGG
Sbjct: 360 EERVIHVSAFEAFWNPISQTIEAILELQNKTSELSDKGIITTRLLVPSSKVGCILGQGGQ 419
Query: 1482 VINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDA 1661
VINEMRRRTQADIRV+SK+D+P+CA++DEELVQISGN+ V KDALAEI SRLR R LRDA
Sbjct: 420 VINEMRRRTQADIRVYSKDDRPRCAAEDEELVQISGNFGVAKDALAEITSRLRVRTLRDA 479
Query: 1662 SAKGETAPIRPV-XXXXXXXXXXXXXXXXXXXXXXXSLGRYEHFKGGGGEYEPQSYPGPP 1838
+A E A + P S RY+ K G EYE QSY P
Sbjct: 480 NAGAEPALVGPAHGFGLAGSVPGGGPRQPPSAVGAGSSSRYDPLKVGRHEYELQSYRIPS 539
Query: 1839 TAIGYPGISG--DRRIRNDIADSYVGAGASNMDEI 1937
TA GYP ++ + +I + DS+ G N I
Sbjct: 540 TASGYPSVNHALEGKIPKNTVDSFPGTRGGNTSTI 574
>ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|566171617|ref|XP_006383459.1| hypothetical protein
POPTR_0005s15690g [Populus trichocarpa]
gi|550339070|gb|ERP61256.1| hypothetical protein
POPTR_0005s15690g [Populus trichocarpa]
Length = 563
Score = 548 bits (1411), Expect = e-153
Identities = 304/492 (61%), Positives = 345/492 (70%), Gaps = 6/492 (1%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKG--AVKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXX 413
M+ NR +FKK N FK KG + +KGKW DS E+ D +TVYRILC
Sbjct: 1 MDGNRRKYFKKPGNNLFKRKGVSSSRKGKWSDSHGEECSGDG---DTVYRILCPSRKIGG 57
Query: 414 XXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXX 593
ALREETQ+KITVADSV GSDERVI+I S S K R+
Sbjct: 58 VIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDGDEGLPAGNGQQ 117
Query: 594 --MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNEI-VVTARLLVPNNIVGCLLGKKGD 761
EP+CAAQDALLKVHDRIVEED+ GG ++DDN+ VVTARLLVPNN+VGC+LGK+GD
Sbjct: 118 EAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKRGD 177
Query: 762 VIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDK 941
VIQRLRSET ANIRVLPADHLPSCA+ +DELVQISGKPA+AK+ALYE+S LLHQNPRKDK
Sbjct: 178 VIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEISILLHQNPRKDK 237
Query: 942 PPLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRPMPWAERFGNQPSAFGP 1121
P S P+ +G + FHPP +ANMLP N W N MPW +GN PS FGP
Sbjct: 238 LP-SVPMPYGGRTFHPPSDS-MANMLPPGNPMWPHRNSTPHS--MPWMGEYGNHPSEFGP 293
Query: 1122 GEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLES 1301
G F+G P G E EFSMKILC + +QQETGASI VE+ S ES
Sbjct: 294 GGFNGVPPGHGREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAES 353
Query: 1302 DERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGH 1481
+ER IRVS+ E LW+PRSQT+DAIL LQ+KTS+ +EKG+I TRLLVPSSKVGCILGQGG
Sbjct: 354 EERAIRVSAFEGLWNPRSQTIDAILQLQDKTSDFSEKGMIITRLLVPSSKVGCILGQGGQ 413
Query: 1482 VINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDA 1661
VINEMRRR QADIRV+ K DKPKCASDDEELVQISGNY V KDALAEIASRLR R LRDA
Sbjct: 414 VINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASRLRARTLRDA 473
Query: 1662 SAKGETAPIRPV 1697
+A E P PV
Sbjct: 474 NAGTEPGPAGPV 485
>gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 506 bits (1304), Expect = e-140
Identities = 277/470 (58%), Positives = 325/470 (69%), Gaps = 18/470 (3%)
Frame = +3
Query: 240 MEANRNHFFKKRPNPEFKAKGAV--KKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXX 413
M+A++ +FFKKRPN +FK KG V KKG W +S EQS +S ++TVYRILC
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 414 XXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXX 593
+LREETQAKITVAD++PGS+ERVI+I S TKIA+ Q
Sbjct: 61 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120
Query: 594 -MEPYCAAQDALLKVHDRIVEEDI-GGAGNNDDNE-IVVTARLLVPNNIVGCLLGKKGDV 764
MEP+CAAQDALLKVHDRI+EED+ GG ++DDNE +TARLLVPNN+VGCLLGK+GDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 180
Query: 765 IQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKP 944
IQRLRSET ANIRVLPAD LP CA+++DE+VQISGKP +AK+ALYEVSTLLHQNPRKDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240
Query: 945 PLSFPLAHGTQHFHPPGPPPVANMLPQANSTWSRHNPNEQGRP-MPWAERFGNQPSAFGP 1121
P SFP A+G Q+FH P P P+A+M P NS+W N + G P PW +G+QPS G
Sbjct: 241 PSSFPQAYGGQNFHSP-PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS 299
Query: 1122 GEFDGFPTPRGGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLES 1301
G + P + GE EFSMKILC +QLQQETGASI VE+ +S
Sbjct: 300 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 359
Query: 1302 DERVIRVSSMEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGH 1481
DERVIR S+ E LW+PRSQT+DAIL LQNKTSE +EKG ITTRLLVPSSKVGCILGQGGH
Sbjct: 360 DERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGH 419
Query: 1482 VINEMRRRTQADIRVFSKEDK--------PKCASD----DEELVQISGNY 1595
VINEMRRRTQADIRV K +C D E L+ G Y
Sbjct: 420 VINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY 469
Score = 83.6 bits (205), Expect = 4e-13
Identities = 61/199 (30%), Positives = 88/199 (44%), Gaps = 30/199 (15%)
Frame = +3
Query: 1152 GGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLESDERVIRVSSM 1331
G P + +ILC + L++ET A I V + S+ERVI + S
Sbjct: 40 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 99
Query: 1332 EVL-------------------WDPRSQTVDAILHLQNKTSEL-----------NEKGII 1421
+P DA+L + ++ E NE I
Sbjct: 100 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 159
Query: 1422 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVFSKEDKPKCASDDEELVQISGNYAV 1601
T RLLVP++ VGC+LG+ G VI +R T A+IRV + P CA + +E+VQISG V
Sbjct: 160 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 219
Query: 1602 VKDALAEIASRLRTRCLRD 1658
K AL E+++ L +D
Sbjct: 220 AKRALYEVSTLLHQNPRKD 238
Score = 63.2 bits (152), Expect = 5e-07
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +3
Query: 1935 IVRTRMKLHGHHAGGSERLVDIRRSPHHLSASQDMFQPFGSSAGHNSHTPRAPYQSYNAR 2114
+V R+KL H G SE +VDIR S HL ++ +Q F +S G + + YQ+ N +
Sbjct: 434 VVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS-GQSMKVQPSSYQNINPQ 492
Query: 2115 QAVHQNIN---PSFQNFSPSPAPYQNILTQQAPYQKISAHGS 2231
Q+ Q ++ S+QN + +PY + QQ+PYQ I+ S
Sbjct: 493 QSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQS 534
>gb|EOY04207.1| RNA-binding KH domain-containing protein isoform 6, partial
[Theobroma cacao]
Length = 530
Score = 442 bits (1136), Expect = e-121
Identities = 249/471 (52%), Positives = 304/471 (64%), Gaps = 10/471 (2%)
Frame = +3
Query: 858 QISGKPAIAKKALYEVSTLLHQNPRKDKPPLSFPLAHGTQHFHPPGPPPVANMLPQANST 1037
+ISGK +AK+ALYEVSTLLHQNPRKD PPLSFP+ H Q+F PP + +P +N
Sbjct: 39 KISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPP------SAIPPSNPM 92
Query: 1038 WSRHNPNEQGRP-MPWAERFGNQPSAFGPGEFDGFPTPRGGEAPYEFSMKILCXXXXXXX 1214
WS N + P MPW GN+PS FGPG FP RG EA EFSMKILC
Sbjct: 93 WSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGG 152
Query: 1215 XXXXXXXXXRQLQQETGASIQVENVSLESDERVIRVSSMEVLWDPRSQTVDAILHLQNKT 1394
+QLQQETGA I VE+ ++ESDERVIRVS++E LW+PRSQT+DAIL LQNKT
Sbjct: 153 VIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKT 212
Query: 1395 SELNEKGIITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVFSKEDKPKCASDDEEL 1574
SE +EKG +TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV+SK+DKPKCAS+DEEL
Sbjct: 213 SEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEEL 272
Query: 1575 VQISGNYAVVKDALAEIASRLRTRCLRDASAKGETAPIRPVXXXXXXXXXXXXXXXXXXX 1754
VQISGN+ V KDALAEIASRLR R LRD +A ETAP+ PV
Sbjct: 273 VQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGPARSMADGLPPAAAI 332
Query: 1755 XXXXSLGRYEHFKGGGG-EYEPQ-SYPGPPTAIGYPGISG--DRRIRNDIADSYVGAGAS 1922
S G YE F+GGGG EYEPQ +Y PP A+ Y ++G + +I N+++ S G G S
Sbjct: 333 GPGRS-GGYESFRGGGGREYEPQNNYSVPPAAVRYSNMNGALEAKILNNMSSSVTGTGGS 391
Query: 1923 NM--DEIVRTRMKLHGHHAGGSERLVDIRRSPHHLSASQDMFQPFGSSAGHNSHTPRAPY 2096
+ E+ R++L GGSE + R S HL+A+Q +FQ F S+G
Sbjct: 392 TILNSEVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQSIFQSFMPSSG---------- 438
Query: 2097 QSYNARQAVHQNIN---PSFQNFSPSPAPYQNILTQQAPYQKISAHGSFRY 2240
QS NA+Q+ +QN++ S+ N + +PY N+ QQ+PYQ H S Y
Sbjct: 439 QSMNAQQSSYQNLSVQQSSYLNMNAQRSPYPNMNAQQSPYQNRHPHQSSPY 489
Score = 86.3 bits (212), Expect = 6e-14
Identities = 76/264 (28%), Positives = 107/264 (40%), Gaps = 14/264 (5%)
Frame = +3
Query: 363 TSETVYRILCQXXXXXXXXXXXXXXXXALREETQAKITVADSVPGSDERVIMILSPSTKI 542
++E +ILC L++ET A I V D+ SDERVI + +
Sbjct: 136 SAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSA----- 190
Query: 543 ARRQTXXXXXXXXXXXXMEPYCAAQDALLKVHDRIVEEDIGGAGNNDDNEIVVTARLLVP 722
P DA+L++ ++ E G VT RLLVP
Sbjct: 191 -------------IEGLWNPRSQTIDAILQLQNKTSEFSEKGT---------VTTRLLVP 228
Query: 723 NNIVGCLLGKKGDVIQRLRSETRANIRVLPADHLPSCALSSDELVQISGKPAIAKKALYE 902
++ VGC+LG+ G VI +R T+A+IRV D P CA +ELVQISG +AK AL E
Sbjct: 229 SSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAE 288
Query: 903 VS------TLLHQNPRKDKPPLSFPLAHGTQHFHPPGPPPVANMLPQANSTWS------- 1043
++ TL N + P+ G G PP A + P + +
Sbjct: 289 IASRLRVRTLRDVNAGAETAPVGPVNGFGPARSMADGLPPAAAIGPGRSGGYESFRGGGG 348
Query: 1044 -RHNPNEQGRPMPWAERFGNQPSA 1112
+ P P A R+ N A
Sbjct: 349 REYEPQNNYSVPPAAVRYSNMNGA 372
>ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza
brachyantha]
Length = 773
Score = 362 bits (930), Expect = 3e-97
Identities = 222/482 (46%), Positives = 292/482 (60%), Gaps = 6/482 (1%)
Frame = +3
Query: 267 KKRPNPEFKAKGAVKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXXXXXXXXXXXXA 446
+KRP+ + +K K ++ + S +ET+YRILC A
Sbjct: 15 RKRPH----SNSDDRKRKRLNTKHDDGSMSSQPTETIYRILCPVKKIGSVLGRGGDVVKA 70
Query: 447 LREETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXXMEPYCAAQDAL 626
LR+ET+AKI VADS+PG+DERVI+I + ++ + M+P+C AQDAL
Sbjct: 71 LRDETKAKIRVADSIPGADERVIIIFNYPSQ-SEDDEAAQNISTDGFQNMKPHCFAQDAL 129
Query: 627 LKVHDRIVE-EDIGGAGNNDDNEIV--VTARLLVPNNIVGCLLGKKGDVIQRLRSETRAN 797
LK+HD+I E ED+ G +++ +E V VTAR+LVP N VGCLLGK G +IQ+LR+ET A
Sbjct: 130 LKIHDKIAEDEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGSIIQQLRNETGAG 189
Query: 798 IRVLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKPPLSFPLAHGTQ 977
IRVLP+++LP CAL SDELVQISG P++ +KALYE+ST LHQ+PRKD PPL + TQ
Sbjct: 190 IRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQ 249
Query: 978 HFH--PPGPPPVANMLPQANSTWSRHNPNEQGRPMPWAERFGNQPSAFGPGEFDGFPTPR 1151
H PP P MLP + H+P +P + + N P + GE +
Sbjct: 250 RKHQSPPQLPHANPMLPHLHVD---HSPQ-----IPLLDPYRNGPLRYHAGEAE------ 295
Query: 1152 GGEAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLE-SDERVIRVSS 1328
EFS+KILC RQ++Q+TGA IQV+ V S ER+I VSS
Sbjct: 296 ------EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGARIQVKEVGKNASGERLIVVSS 349
Query: 1329 MEVLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGHVINEMRRRT 1508
E+ DP S T++A++ L +K S E +TTRL+VPS+KVGCILG+GG VI EMRRRT
Sbjct: 350 QEIPDDPVSPTIEALILLHSKVSAPAENRHLTTRLVVPSNKVGCILGEGGKVITEMRRRT 409
Query: 1509 QADIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDASAKGETAPI 1688
A+IRV+SK DKPK S DEELVQ++G A+ + AL EIASRLRTR LRD S+ P
Sbjct: 410 GAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSNNPPPF 469
Query: 1689 RP 1694
P
Sbjct: 470 AP 471
>gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica Group]
Length = 677
Score = 352 bits (903), Expect = 4e-94
Identities = 215/480 (44%), Positives = 283/480 (58%), Gaps = 6/480 (1%)
Frame = +3
Query: 273 RPNPEFKAKGAVKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXXXXXXXXXXXXALR 452
R P F + K K +S + S ET+YRILC ALR
Sbjct: 15 RKRPHFNSDDG--KRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKALR 72
Query: 453 EETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXXMEPYCAAQDALLK 632
+ T+AKI VADS+PG+DERVI+I + S++ + M+P+C AQDALLK
Sbjct: 73 DTTKAKIRVADSIPGADERVIIIFNYSSQT---EEAAQNISTDGFEDMKPHCFAQDALLK 129
Query: 633 VHDRIVEEDIGGAG---NNDDNEIVVTARLLVPNNIVGCLLGKKGDVIQRLRSETRANIR 803
+HD+I ++ AG +N V AR+LVP N VGCLLGK G +IQ+LR++T A IR
Sbjct: 130 IHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIR 189
Query: 804 VLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKPPLSFPLAHGTQHF 983
VLP+++LP CAL SDELVQISG ++ +KALYE+ST LHQ+PRKD PPL + TQ
Sbjct: 190 VLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQRK 249
Query: 984 H--PPGPPPVANMLPQANSTWSRHNPNEQGRPMPWAERFGNQPSAFGPGEFDGFPTPRGG 1157
H PP P MLP + H+P +P + + N+P + E +
Sbjct: 250 HQAPPQLPHANPMLPHLHVD---HSPQ-----IPLLDPYRNRPLQYHSAEAE-------- 293
Query: 1158 EAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLE-SDERVIRVSSME 1334
EFS+KILC RQ++Q+TGA +QV+ V S+ER+I VSS E
Sbjct: 294 ----EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQE 349
Query: 1335 VLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 1514
+ DP S T++A++ L +K S L E +TTRL+VPS+KVGCI+G+GG VI EMRRRT A
Sbjct: 350 IPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGA 409
Query: 1515 DIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDASAKGETAPIRP 1694
+IRV+SK DKPK S DEELVQ++G A+ + AL EIASRLRTR LRD S+ P P
Sbjct: 410 EIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSNNPTPFAP 469
>ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] gi|22128716|gb|AAM92828.1|
putative RNA-binding protein [Oryza sativa Japonica
Group] gi|110289325|gb|ABB47821.2| KH domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa
Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 762
Score = 352 bits (903), Expect = 4e-94
Identities = 215/480 (44%), Positives = 283/480 (58%), Gaps = 6/480 (1%)
Frame = +3
Query: 273 RPNPEFKAKGAVKKGKWQDSGLEQSLEDSHTSETVYRILCQXXXXXXXXXXXXXXXXALR 452
R P F + K K +S + S ET+YRILC ALR
Sbjct: 15 RKRPHFNSDDG--KRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKALR 72
Query: 453 EETQAKITVADSVPGSDERVIMILSPSTKIARRQTXXXXXXXXXXXXMEPYCAAQDALLK 632
+ T+AKI VADS+PG+DERVI+I + S++ + M+P+C AQDALLK
Sbjct: 73 DTTKAKIRVADSIPGADERVIIIFNYSSQT---EEAAQNISTDGFEDMKPHCFAQDALLK 129
Query: 633 VHDRIVEEDIGGAG---NNDDNEIVVTARLLVPNNIVGCLLGKKGDVIQRLRSETRANIR 803
+HD+I ++ AG +N V AR+LVP N VGCLLGK G +IQ+LR++T A IR
Sbjct: 130 IHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIR 189
Query: 804 VLPADHLPSCALSSDELVQISGKPAIAKKALYEVSTLLHQNPRKDKPPLSFPLAHGTQHF 983
VLP+++LP CAL SDELVQISG ++ +KALYE+ST LHQ+PRKD PPL + TQ
Sbjct: 190 VLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQRK 249
Query: 984 H--PPGPPPVANMLPQANSTWSRHNPNEQGRPMPWAERFGNQPSAFGPGEFDGFPTPRGG 1157
H PP P MLP + H+P +P + + N+P + E +
Sbjct: 250 HQAPPQLPHANPMLPHLHVD---HSPQ-----IPLLDPYRNRPLQYHSAEAE-------- 293
Query: 1158 EAPYEFSMKILCXXXXXXXXXXXXXXXXRQLQQETGASIQVENVSLE-SDERVIRVSSME 1334
EFS+KILC RQ++Q+TGA +QV+ V S+ER+I VSS E
Sbjct: 294 ----EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQE 349
Query: 1335 VLWDPRSQTVDAILHLQNKTSELNEKGIITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 1514
+ DP S T++A++ L +K S L E +TTRL+VPS+KVGCI+G+GG VI EMRRRT A
Sbjct: 350 IPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGA 409
Query: 1515 DIRVFSKEDKPKCASDDEELVQISGNYAVVKDALAEIASRLRTRCLRDASAKGETAPIRP 1694
+IRV+SK DKPK S DEELVQ++G A+ + AL EIASRLRTR LRD S+ P P
Sbjct: 410 EIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSNNPTPFAP 469