BLASTX nr result
ID: Rauwolfia21_contig00002990
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00002990 (1554 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 320 1e-84 sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 313 2e-82 ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 300 1e-78 ref|NP_001275094.1| single-stranded DNA binding protein precurso... 295 3e-77 ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 294 6e-77 ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 293 2e-76 gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus pe... 293 2e-76 ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 288 6e-75 gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] 282 2e-73 ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 281 5e-73 ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 280 9e-73 sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,... 276 1e-71 sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, c... 276 2e-71 ref|XP_002326357.1| predicted protein [Populus trichocarpa] gi|5... 274 9e-71 ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 271 6e-70 gb|EPS59981.1| hypothetical protein M569_14824, partial [Genlise... 270 1e-69 ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A... 270 2e-69 ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 269 2e-69 ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 269 2e-69 ref|XP_003535181.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 269 3e-69 >sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName: Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris] Length = 273 Score = 320 bits (820), Expect = 1e-84 Identities = 184/279 (65%), Positives = 200/279 (71%), Gaps = 2/279 (0%) Frame = -1 Query: 1233 LHFLSLTPQTLSLSKPAVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFSSRFGRN 1054 LHFLSLTPQTL L KP FSSRF R Sbjct: 8 LHFLSLTPQTLPLPKPTSQTTSLSFFSLPPSSLNLSLSSSSSC---------FSSRFVRK 58 Query: 1053 VTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALFERAGNVE 874 VTLS +FDQIE V++ ++GV E E +FSPDLK+FVGNLPFS DSAALA LFERAGNVE Sbjct: 59 VTLS-DFDQIEDVEDGDDGV---EEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVE 114 Query: 873 MVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXXXXXXXXXXX 694 MVEVIYDK++GRSRGFGFVTMS+ EEVE A QQFNGYELDGR LRVN+ Sbjct: 115 MVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSF 174 Query: 693 XXXXXGA-SLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESGRSRGFGFV 517 G S DSSNRVYVGNLAWGVD ALETLFSEQGKV+DAKVVYDR+SGRSRGFGFV Sbjct: 175 RGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFV 234 Query: 516 TYSSSDEVNNAIELLNGVDLNGRAIRVSPAEAR-PRRDF 403 TYSS++EVNNAIE L+GVDLNGRAIRVSPAEAR PRR F Sbjct: 235 TYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273 >sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia] Length = 279 Score = 313 bits (801), Expect = 2e-82 Identities = 182/285 (63%), Positives = 197/285 (69%), Gaps = 8/285 (2%) Frame = -1 Query: 1233 LHFLSLTPQTLSLSKPAVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFSSRFGRN 1054 LHFLSLTPQTL L KP FSSRF R Sbjct: 8 LHFLSLTPQTLLLPKPTSQTTSLSFFSLPPSSLNLSLSSPSSC---------FSSRFVRK 58 Query: 1053 VTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALFERAGNVE 874 VTL +FDQIE V++ +EGV E E +FSPDLK+FVGNL FS DSAALA LFERAGNVE Sbjct: 59 VTLP-DFDQIEDVEDGDEGV---EEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVE 114 Query: 873 MVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXXXXXXXXXXX 694 MVEVIYDK++GRSRGFGFVTMS+ EEVE A QQFNGYELDGR LRVN+ Sbjct: 115 MVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSF 174 Query: 693 XXXXXG-------ASLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESGRS 535 S DSSNRVYVGNLAWGVD ALETLFSEQGKV+DAKVVYDR+SGRS Sbjct: 175 RENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRS 234 Query: 534 RGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEAR-PRRDF 403 RGFGFVTYSS++EVNNAIE L+GVDLNGRAIRVSPAEAR PRR F Sbjct: 235 RGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279 >ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis vinifera] Length = 288 Score = 300 bits (767), Expect = 1e-78 Identities = 159/238 (66%), Positives = 187/238 (78%), Gaps = 14/238 (5%) Frame = -1 Query: 1074 SSRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALF 895 SSRF RNV +S++++Q +E VLSDE EPSFSPDLKLFVGNLPF+VDSA LA LF Sbjct: 58 SSRFVRNVAVSSDYEQ-------DEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLF 110 Query: 894 ERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNA----- 730 E+AGNVEMVEVIYDK++GRSRGFGFVTMSTVEEVE AAQQFNGYEL+GR LRVN+ Sbjct: 111 EQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPA 170 Query: 729 ---------XXXXXXXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETLFSEQGKV 577 GA+L+S+NR+YVGNL+WGVD+LALETLFSEQGKV Sbjct: 171 RRENSNFRGENSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKV 230 Query: 576 IDAKVVYDRESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRRDF 403 +A+V+YDRE+GRSRGFGFVTY+S++EVN AIE L+GVDLNGR+IRV+ AEARPRR F Sbjct: 231 TEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288 >ref|NP_001275094.1| single-stranded DNA binding protein precursor [Solanum tuberosum] gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum] Length = 289 Score = 295 bits (756), Expect = 3e-77 Identities = 178/291 (61%), Positives = 196/291 (67%), Gaps = 14/291 (4%) Frame = -1 Query: 1233 LHFLSLTPQTLSLSKPAVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFSSRFGRN 1054 LHFLSLTPQTL KP SSRF R Sbjct: 8 LHFLSLTPQTLP--KPTSQTTSISFFSLPPSSLNLSLSSSSTPRNFE------SSRFVRK 59 Query: 1053 VTLSTEFDQIESV----DEDEEGVLSDES----EPSFSPDLKLFVGNLPFSVDSAALAAL 898 VTLS +FDQIE V D++EEG LSDE E + +PDLK+FVGNLPFSVDSAALA L Sbjct: 60 VTLS-DFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAALAEL 118 Query: 897 FERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXXX 718 FERAG+VEMVEVIYDK++GRSRGFGFVTMS+ E VE A QQFNGYE+DGR LRVN+ Sbjct: 119 FERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAP 178 Query: 717 XXXXXXXXXXXXXGA-----SLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYD 553 S+DSSNRVYVGNLAW VD LETLFSEQGKV+DAKVVYD Sbjct: 179 PKRENSFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYD 238 Query: 552 RESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEAR-PRRDF 403 R+SGRSRGFGFVTYSS+ EVN+AIE L+GVDL GRAIRVSPAEAR PRR F Sbjct: 239 RDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARPPRRQF 289 >ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Solanum lycopersicum] Length = 290 Score = 294 bits (753), Expect = 6e-77 Identities = 178/292 (60%), Positives = 195/292 (66%), Gaps = 15/292 (5%) Frame = -1 Query: 1233 LHFLSLTPQTLSLSKPAVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFSSRFGRN 1054 LHFLSLTPQTL KP SSRF R Sbjct: 8 LHFLSLTPQTLP--KPTSQTTSISFFSLPSSSLNLSLSSSSTPRYFE------SSRFVRK 59 Query: 1053 VTLSTEFDQIESV-----DEDEEGVLSDES----EPSFSPDLKLFVGNLPFSVDSAALAA 901 VTLS +FDQIE V DE+EEG LSDE E + +PDLK+FVGNLPFSVDSA LA Sbjct: 60 VTLS-DFDQIEEVGAGDDDEEEEGGLSDEGASYQERNANPDLKIFVGNLPFSVDSAYLAE 118 Query: 900 LFERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXX 721 LFERAG+VEMVEVIYDK++GRSRGFGFVTMS+ E VE A QQFNGYE+DGR LRVN+ Sbjct: 119 LFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPA 178 Query: 720 XXXXXXXXXXXXXXGA-----SLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVY 556 S+DSSNRVYVGNLAW VD LETLFSEQGKV+DAKVVY Sbjct: 179 PPKRENSFGGNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVY 238 Query: 555 DRESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEAR-PRRDF 403 DR+SGRSRGFGFVTYSS+ EVN+AIE L+GVDL GRAIRVSPAEAR PRR F Sbjct: 239 DRDSGRSRGFGFVTYSSAQEVNDAIESLDGVDLGGRAIRVSPAEARPPRRQF 290 >ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|568855826|ref|XP_006481497.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Citrus sinensis] gi|557530828|gb|ESR42011.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 282 Score = 293 bits (749), Expect = 2e-76 Identities = 160/224 (71%), Positives = 177/224 (79%), Gaps = 3/224 (1%) Frame = -1 Query: 1071 SRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALFE 892 SRF RNV +S+EFDQ EE +LSDE +FSPDLKLFVGNLPFSVDSA LA LFE Sbjct: 63 SRFVRNVAVSSEFDQ-------EEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFE 115 Query: 891 RAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNA---XXX 721 AGNVEMVEVIYDKV+GRSRGFGFVTMS+VEEVE AAQQFNGYEL+GR LRVN+ Sbjct: 116 TAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPR 175 Query: 720 XXXXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESG 541 GA NRVYVGNL+WGVD+LALETLF EQGKV++AKVVYDRESG Sbjct: 176 REEFSPRGPRGGGAGAPSSGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESG 235 Query: 540 RSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRR 409 RSRGFGFVTYSS++EV+NAI+ LNGVDL GRAIRVS AEARP+R Sbjct: 236 RSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 279 Score = 79.0 bits (193), Expect = 5e-12 Identities = 39/83 (46%), Positives = 54/83 (65%) Frame = -1 Query: 654 RVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESGRSRGFGFVTYSSSDEVNNAIEL 475 +++VGNL + VD+ L LF G V +V+YD+ +GRSRGFGFVT SS +EV A + Sbjct: 95 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154 Query: 474 LNGVDLNGRAIRVSPAEARPRRD 406 NG +L GR +RV+ PRR+ Sbjct: 155 FNGYELEGRPLRVNSGPPPPRRE 177 >gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica] Length = 298 Score = 293 bits (749), Expect = 2e-76 Identities = 156/224 (69%), Positives = 178/224 (79%) Frame = -1 Query: 1074 SSRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALF 895 SSRF RNV +S+EF+Q +E VLSD+ E SF+PDLKLFVGNLPFSVDSA LA LF Sbjct: 83 SSRFVRNVAVSSEFEQ-------DEEVLSDDGEASFAPDLKLFVGNLPFSVDSAQLAGLF 135 Query: 894 ERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXXXX 715 E AGNVEMVEVIYDK +GRSRGFGFVTMS+V+E E AA+Q NGYELDGR LRVN Sbjct: 136 ESAGNVEMVEVIYDKTTGRSRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPP 195 Query: 714 XXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESGRS 535 G S DSSNR+YVGNLAWGVDNLALE LFSEQGKV++AKVVYDR+SGRS Sbjct: 196 RSEDSFRGARGGGGS-DSSNRLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRS 254 Query: 534 RGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRRDF 403 RGFGFVTY ++DE+N+A+E L+GVDLNGR+IRV+ AE RPRR F Sbjct: 255 RGFGFVTYGTADEMNSAMESLDGVDLNGRSIRVTAAEPRPRRQF 298 >ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 273 Score = 288 bits (736), Expect = 6e-75 Identities = 154/224 (68%), Positives = 176/224 (78%) Frame = -1 Query: 1074 SSRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALF 895 SSRF +NV +S+EF Q EE LSD E SFS DLKLFVGNLPF+VDSA LA LF Sbjct: 58 SSRFLKNVAISSEFGQ-------EEDFLSDGDEQSFSQDLKLFVGNLPFNVDSARLAGLF 110 Query: 894 ERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXXXX 715 E AGNVEMVEVIYDKV+GRSRGFGFVTM+T+EEVE A++QFNGYELDGR LRVN Sbjct: 111 ETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVN-FGPPP 169 Query: 714 XXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESGRS 535 G + DS NRVYVGNL+W VDNLALETLF E+G+V+DAKVVYDR+SGRS Sbjct: 170 QKESSFSRGPRGGETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRS 229 Query: 534 RGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRRDF 403 RGFGFVTYSS++EV+NAI+ LNG +L+GRAIRVS AEA+PRR F Sbjct: 230 RGFGFVTYSSAEEVDNAIDSLNGAELDGRAIRVSVAEAKPRRQF 273 >gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] Length = 296 Score = 282 bits (722), Expect = 2e-73 Identities = 153/233 (65%), Positives = 176/233 (75%), Gaps = 11/233 (4%) Frame = -1 Query: 1068 RFGRNVTLSTEFDQIESVDEDEEGVLSDESE-PSFSPDLKLFVGNLPFSVDSAALAALFE 892 RF V +S+EFDQ +E VLSD E P FSPDLKLFVGNLPFSVDSA LA LFE Sbjct: 71 RFVPKVAVSSEFDQ-------DEDVLSDGGEEPGFSPDLKLFVGNLPFSVDSAQLAGLFE 123 Query: 891 RAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVN------- 733 R GNVEMVEVIYDK +GRSRGFGFVTMS+++EVE AAQQFNGYEL+GR LRVN Sbjct: 124 RTGNVEMVEVIYDKTTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSR 183 Query: 732 ---AXXXXXXXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKV 562 + GA ++ NRVYVGNL+WGVDN ALE+LFSEQGKV++AKV Sbjct: 184 EDDSFPRGRRGGGGGGGGGGGGAGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKV 243 Query: 561 VYDRESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRRDF 403 VYDR+SGRSRGFGFVTY+++DEVN+AI LNGVDLNGR+IRV+ AEA+PRR F Sbjct: 244 VYDRDSGRSRGFGFVTYNTADEVNSAINSLNGVDLNGRSIRVTHAEAKPRRSF 296 >ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] Length = 280 Score = 281 bits (719), Expect = 5e-73 Identities = 155/229 (67%), Positives = 175/229 (76%), Gaps = 5/229 (2%) Frame = -1 Query: 1074 SSRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALF 895 SSRF +V +S+EF Q EE V SD E SFS DLKLFVGNLPF+VDSA LA LF Sbjct: 60 SSRFVPSVAISSEFGQ-------EEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLF 112 Query: 894 ERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXXXX 715 E AGNVEMVEVIYDKV+GRSRGFGFVTMS+++EVE AAQQFNGYEL+GR LRVN+ Sbjct: 113 ESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQ 172 Query: 714 XXXXXXXXXXXXGA-----SLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDR 550 G SL+ NR+YVGNL+W VDNLALE+ FSEQGKV+DAKVVYDR Sbjct: 173 RESSFSRSPRFGGGGGGGESLE-GNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDR 231 Query: 549 ESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRRDF 403 ESGRSRGFGFVTYSS++EV NAI+ LNG +L+GRAIRVS AEARPRR F Sbjct: 232 ESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEARPRRQF 280 >ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform X2 [Solanum tuberosum] Length = 291 Score = 280 bits (717), Expect = 9e-73 Identities = 167/291 (57%), Positives = 191/291 (65%), Gaps = 14/291 (4%) Frame = -1 Query: 1233 LHFLSLTPQTLSLSKP-AVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFSSRFGR 1057 L FL +TPQTLS KP + SF SRF R Sbjct: 8 LQFLFVTPQTLSSLKPNSAPTSFSFFSLPSSSLNLSLSSSTPSSSIKPFESSSFGSRFVR 67 Query: 1056 NVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALFERAGNV 877 NV LS EFDQ+E D+ G + E EP+FSPDLKLFVGNLPFSVDSAALA LFERAGNV Sbjct: 68 NVALS-EFDQLE----DDVGEV--EEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNV 120 Query: 876 EMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXXXXXXXXXX 697 EMVEVIYDK++GRSRGFGFVTMS+ EVE A QQFNGYE+DGR LRVN+ Sbjct: 121 EMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGPAPEKRENSF 180 Query: 696 XXXXXXGA------------SLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYD 553 + + DSSNRVYVGNL+WGVD+L+L LFS+QGKV+D KVVYD Sbjct: 181 GGGRGGRSENSSYGGARGGRNFDSSNRVYVGNLSWGVDDLSLRELFSDQGKVVDCKVVYD 240 Query: 552 RESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEAR-PRRDF 403 R+SGRSRGFGFVT+SS+ EVN AI+ LNG DL+GR+IRVS AE R PRR F Sbjct: 241 RDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPRRQF 291 >sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName: Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris] Length = 291 Score = 276 bits (707), Expect = 1e-71 Identities = 157/245 (64%), Positives = 173/245 (70%), Gaps = 20/245 (8%) Frame = -1 Query: 1077 FSSRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAAL 898 F S F V LS FDQ+E E E +P FS DLKLFVGNLPFSVDSAALA L Sbjct: 55 FESSFSTRVALSG-FDQLEDDVEVAE-------QPRFSEDLKLFVGNLPFSVDSAALAGL 106 Query: 897 FERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNA---- 730 FERAGNVEMVEVIYDK++GRSRGFGFVTMST EEVE A QQFNGYE+DGR +RVNA Sbjct: 107 FERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAP 166 Query: 729 ----------------XXXXXXXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETL 598 G S+DSSNRVYVGNL+WGVD+LAL+ L Sbjct: 167 AKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKEL 226 Query: 597 FSEQGKVIDAKVVYDRESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEAR 418 FSEQG V+DAKVVYDR+SGRSRGFGFVTYSSS EVN+AI+ LNGVDL+GR+IRVS AE R Sbjct: 227 FSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286 Query: 417 PRRDF 403 PRR F Sbjct: 287 PRRQF 291 >sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP31; Flags: Precursor gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia] Length = 292 Score = 276 bits (706), Expect = 2e-71 Identities = 155/245 (63%), Positives = 174/245 (71%), Gaps = 20/245 (8%) Frame = -1 Query: 1077 FSSRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAAL 898 F S F V LS +FDQ+E E E +P FS DLKLFVGNLPFSVDSAALA L Sbjct: 56 FESSFSTRVALS-DFDQLEDDVEVAE-------QPRFSEDLKLFVGNLPFSVDSAALAGL 107 Query: 897 FERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNA---- 730 FERAGNVE+VEVIYDK+SGRSRGFGFVTMST EEVE A QQFNGYE+DGR +RVNA Sbjct: 108 FERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAP 167 Query: 729 ----------------XXXXXXXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETL 598 G S+DSSNRVYVGNL+WGVD+LAL+ L Sbjct: 168 AKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKEL 227 Query: 597 FSEQGKVIDAKVVYDRESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEAR 418 FSEQG V+DAKVVYDR+SGRSRGFGFVTYSS+ EVN+AI+ LNG+DL+GR+IRVS AE R Sbjct: 228 FSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287 Query: 417 PRRDF 403 PRR F Sbjct: 288 PRRQF 292 >ref|XP_002326357.1| predicted protein [Populus trichocarpa] gi|566176031|ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 286 Score = 274 bits (700), Expect = 9e-71 Identities = 147/235 (62%), Positives = 176/235 (74%), Gaps = 11/235 (4%) Frame = -1 Query: 1074 SSRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALF 895 SSRF ++V +S+EF Q EE V D EPSFSPDL+LFVGNLPF+V+SA LA LF Sbjct: 59 SSRFLKSVAISSEFGQ-------EEDVFGDGDEPSFSPDLQLFVGNLPFNVNSAQLADLF 111 Query: 894 ERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXXXX 715 + AGNVEMVEV YDKV+GRSRGFGFVTMST+EEVE A+QQFNGYELDGR LRVN+ Sbjct: 112 KSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQ 171 Query: 714 XXXXXXXXXXXXGA-----------SLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDA 568 + + DSSNRVYVGNL+W VD+ ALE+LF E+GKV+DA Sbjct: 172 RETSFSRLPQRENSFSRGPGARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDA 231 Query: 567 KVVYDRESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRRDF 403 KVVYDR+SGRS+GFGFVTYSS++EV +A++ LNG +L+GRAIRVS AEA+PRR F Sbjct: 232 KVVYDRDSGRSKGFGFVTYSSAEEVEDAVDSLNGAELDGRAIRVSVAEAKPRRRF 286 >ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 277 Score = 271 bits (693), Expect = 6e-70 Identities = 143/214 (66%), Positives = 167/214 (78%), Gaps = 6/214 (2%) Frame = -1 Query: 1026 IESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALFERAGNVEMVEVIYDKV 847 + ++DEE + DE+EP+FSPDLKLFVGNLPF+VDSA LA LFE AGNVEMVEVIYDK Sbjct: 64 VSDFEQDEEVLSGDEAEPNFSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKT 123 Query: 846 SGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVN-----AXXXXXXXXXXXXXXXX 682 +GRSRGFGFVTMS+ +EVE AA+QFNGYELDGR LRVN Sbjct: 124 TGRSRGFGFVTMSSAQEVEAAARQFNGYELDGRALRVNYGPPPPRTEDSFRGARGGSPRG 183 Query: 681 XGASLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESGRSRGFGFVTYSSS 502 G DSSNR+YVGNLAWGVDNLALE LF+EQGKV++AKVV+DR+SGRSRGFGFVTY S+ Sbjct: 184 GGGYGDSSNRLYVGNLAWGVDNLALENLFNEQGKVLEAKVVFDRDSGRSRGFGFVTYGSA 243 Query: 501 DEVNNAIELLNGVDLNGRAIRVSPAEAR-PRRDF 403 +E+N+AIE L+GVDL GR+IRV+ AE R PRR F Sbjct: 244 EEMNSAIESLDGVDLGGRSIRVTAAEPRPPRRQF 277 >gb|EPS59981.1| hypothetical protein M569_14824, partial [Genlisea aurea] Length = 281 Score = 270 bits (690), Expect = 1e-69 Identities = 146/237 (61%), Positives = 168/237 (70%), Gaps = 16/237 (6%) Frame = -1 Query: 1071 SRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALFE 892 SRF +V +S+ D E ++E E S EP+FSPDLKLFVGNLPF+VDSA LA LFE Sbjct: 47 SRFVSHVAISSGLD--EDLEEGENSEFSVSDEPNFSPDLKLFVGNLPFNVDSAGLAELFE 104 Query: 891 RAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNA------ 730 +AGNVEMVEVIYDK SGRSRGFGFVTM+TVEE E AAQQFNGYE GR LRVNA Sbjct: 105 QAGNVEMVEVIYDKASGRSRGFGFVTMTTVEEAEAAAQQFNGYEFQGRPLRVNAGPPPSR 164 Query: 729 ----------XXXXXXXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETLFSEQGK 580 +S D SNRV+VGNLAWGVDNLALETLF EQG Sbjct: 165 NGSTFRGPRGSSSSRSNNGFPFQSTRTRSSFDRSNRVHVGNLAWGVDNLALETLFREQGN 224 Query: 579 VIDAKVVYDRESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRR 409 V +A V+YDRE+GRS+GFGFVTY S +EV NAI+ L+G+DLNGR+IRVS AE+RP+R Sbjct: 225 VKEATVIYDRETGRSKGFGFVTYGSREEVKNAIKSLDGIDLNGRSIRVSEAESRPKR 281 >ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda] gi|548849631|gb|ERN08390.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda] Length = 272 Score = 270 bits (689), Expect = 2e-69 Identities = 146/225 (64%), Positives = 170/225 (75%), Gaps = 4/225 (1%) Frame = -1 Query: 1065 FGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALFERA 886 F R+V + +EF Q +EDE + E +FS DLKLFVGNLPFSVDSA LA LFE+A Sbjct: 56 FIRSVAVFSEFQQ----EEDE----APSEEANFSADLKLFVGNLPFSVDSARLAELFEQA 107 Query: 885 GNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNAXXXXXXXX 706 GNVEMVEVIYDK +GRSRGFGFVTMSTVEEVE A QQFNG++ +GR LRVN+ Sbjct: 108 GNVEMVEVIYDKQTGRSRGFGFVTMSTVEEVEAAVQQFNGHDFEGRQLRVNSGPPPARDE 167 Query: 705 XXXXXXXXXGA----SLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESGR 538 + S DS NRVYVGNL+WGVD+LALE LFSEQGKV++AKVVYDRESGR Sbjct: 168 MSPRGSRGFDSPRPRSFDSPNRVYVGNLSWGVDDLALENLFSEQGKVMEAKVVYDRESGR 227 Query: 537 SRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRRDF 403 SRGFGFVTYS+++EV +AI LNG DL+GR IRV+PAEA+PRR F Sbjct: 228 SRGFGFVTYSTAEEVTSAISTLNGADLDGRPIRVTPAEAKPRRQF 272 >ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana] gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags: Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana] gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana] gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana] gi|330254275|gb|AEC09369.1| chloroplast RNA binding protein [Arabidopsis thaliana] Length = 289 Score = 269 bits (688), Expect = 2e-69 Identities = 146/235 (62%), Positives = 172/235 (73%), Gaps = 13/235 (5%) Frame = -1 Query: 1074 SSRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALF 895 +SRF RNV +++EF+ V+ED ++ E SFS DLKLFVGNLPF+VDSA LA LF Sbjct: 56 ASRFARNVAITSEFE----VEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLF 111 Query: 894 ERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNA----- 730 E AGNVEMVEVIYDK++GRSRGFGFVTMS+V EVE AAQQFNGYELDGR LRVNA Sbjct: 112 ESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPP 171 Query: 729 --------XXXXXXXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETLFSEQGKVI 574 G+ S NRVYVGNL+WGVD++ALE+LFSEQGKV+ Sbjct: 172 KREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVV 231 Query: 573 DAKVVYDRESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRR 409 +A+V+YDR+SGRS+GFGFVTY SS EV NAI+ L+G DL+GR IRVS AEARP R Sbjct: 232 EARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286 Score = 78.6 bits (192), Expect = 7e-12 Identities = 39/89 (43%), Positives = 56/89 (62%) Frame = -1 Query: 672 SLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESGRSRGFGFVTYSSSDEV 493 S + +++VGNL + VD+ L LF G V +V+YD+ +GRSRGFGFVT SS EV Sbjct: 86 SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEV 145 Query: 492 NNAIELLNGVDLNGRAIRVSPAEARPRRD 406 A + NG +L+GR +RV+ P+R+ Sbjct: 146 EAAAQQFNGYELDGRPLRVNAGPPPPKRE 174 >ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|557530825|gb|ESR42008.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 271 Score = 269 bits (688), Expect = 2e-69 Identities = 152/224 (67%), Positives = 167/224 (74%), Gaps = 3/224 (1%) Frame = -1 Query: 1071 SRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALFE 892 SRF RNV +S+EFDQ EE +LSDE +FSPDLKLFVGNLPFSVDSA LA LFE Sbjct: 63 SRFVRNVAVSSEFDQ-------EEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFE 115 Query: 891 RAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNA---XXX 721 AGNVEMVEVIYDKV+GRSRGFGFVTMS+VEEVE AAQQFNGYEL+GR LRVN+ Sbjct: 116 TAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPR 175 Query: 720 XXXXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESG 541 GA NRVYVGNL+WGVD+LALETLF EQGKV++AKVVYDRESG Sbjct: 176 REEFSPRGPRGGGAGAPSSGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESG 235 Query: 540 RSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRR 409 RSRGFGFVTYSS++E DL GRAIRVS AEARP+R Sbjct: 236 RSRGFGFVTYSSAEE-----------DLAGRAIRVSVAEARPQR 268 Score = 79.0 bits (193), Expect = 5e-12 Identities = 39/83 (46%), Positives = 54/83 (65%) Frame = -1 Query: 654 RVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYDRESGRSRGFGFVTYSSSDEVNNAIEL 475 +++VGNL + VD+ L LF G V +V+YD+ +GRSRGFGFVT SS +EV A + Sbjct: 95 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154 Query: 474 LNGVDLNGRAIRVSPAEARPRRD 406 NG +L GR +RV+ PRR+ Sbjct: 155 FNGYELEGRPLRVNSGPPPPRRE 177 >ref|XP_003535181.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Glycine max] Length = 275 Score = 269 bits (687), Expect = 3e-69 Identities = 145/228 (63%), Positives = 170/228 (74%), Gaps = 6/228 (2%) Frame = -1 Query: 1074 SSRFGRNVTLSTEFDQIESVDEDEEGVLSDESEPSFSPDLKLFVGNLPFSVDSAALAALF 895 SSRF +V +S++ Q EE SD PSFSPDLKLFVGNLPF+VDSA LA LF Sbjct: 54 SSRFVPHVVVSSDLGQ-------EEDTFSDGDGPSFSPDLKLFVGNLPFNVDSAQLAELF 106 Query: 894 ERAGNVEMVEVIYDKVSGRSRGFGFVTMSTVEEVEVAAQQFNGYELDGRVLRVNA----- 730 E AGNVE+VEVIYDK +GRSRGFGFVTMS+VEE E AAQQFNGYELDGR LRVN+ Sbjct: 107 ESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAQQFNGYELDGRALRVNSGPPPA 166 Query: 729 -XXXXXXXXXXXXXXXXXGASLDSSNRVYVGNLAWGVDNLALETLFSEQGKVIDAKVVYD 553 G DS NRV+V NLAWGVDN+AL++LF EQG V++A+V+YD Sbjct: 167 RNESAPRFRGGSSFGSRGGGPSDSENRVHVSNLAWGVDNVALKSLFREQGNVLEARVIYD 226 Query: 552 RESGRSRGFGFVTYSSSDEVNNAIELLNGVDLNGRAIRVSPAEARPRR 409 RESGRSRGFGFVT+SS DEVN+AI+ LNGVDLNGRAIRVS A+++P++ Sbjct: 227 RESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAIRVSLADSKPKQ 274