BLASTX nr result
ID: Rauwolfia21_contig00002819
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00002819
(440 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 60 3e-07
gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase s... 57 3e-06
sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carbo... 57 3e-06
gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 56 4e-06
gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (Ru... 56 4e-06
gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (Ru... 56 4e-06
gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (Ru... 56 4e-06
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox... 56 6e-06
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 56 6e-06
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 56 6e-06
ref|XP_004299075.1| PREDICTED: ribulose bisphosphate carboxylase... 55 7e-06
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKSASAFPVT+KSAD TSLASNGGRVQCMQV
Sbjct: 31 LKSASAFPVTRKSADITSLASNGGRVQCMQV 61
>gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
[Mesembryanthemum crystallinum]
Length = 180
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKS SAFPVTKKS D TS+ASNGGRVQCMQV
Sbjct: 28 LKSVSAFPVTKKSNDITSIASNGGRVQCMQV 58
>sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|304444|gb|AAA03694.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 180
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKS SAFPVTKKS D TS+ASNGGRVQCMQV
Sbjct: 28 LKSVSAFPVTKKSNDITSIASNGGRVQCMQV 58
>gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Sonneratia alba] gi|241865463|gb|ACS68764.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Sonneratia alba]
Length = 173
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKS+SAFP T+K+AD TSLASNGGRVQCMQV
Sbjct: 24 LKSSSAFPTTRKTADITSLASNGGRVQCMQV 54
>gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia ovata]
Length = 178
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKS+SAFP T+K+AD TSLASNGGRVQCMQV
Sbjct: 25 LKSSSAFPTTRKTADITSLASNGGRVQCMQV 55
>gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia apetala]
Length = 178
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKS+SAFP T+K+AD TSLASNGGRVQCMQV
Sbjct: 25 LKSSSAFPTTRKTADITSLASNGGRVQCMQV 55
>gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia alba]
Length = 178
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKS+SAFP T+K+AD TSLASNGGRVQCMQV
Sbjct: 25 LKSSSAFPTTRKTADITSLASNGGRVQCMQV 55
>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
subunit [Pyrus pyrifolia var. culta]
Length = 183
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKS+SAFPVT+KS D TS+ASNGGRVQCMQV
Sbjct: 33 LKSSSAFPVTRKSNDITSIASNGGRVQCMQV 63
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKS+SAFPVT+KS D TS+ASNGGRVQCMQV
Sbjct: 29 LKSSSAFPVTRKSNDITSIASNGGRVQCMQV 59
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKSASAFPVT+KS D TSL SNGGRVQCMQV
Sbjct: 31 LKSASAFPVTRKSNDITSLPSNGGRVQCMQV 61
>ref|XP_004299075.1| PREDICTED: ribulose bisphosphate carboxylase small chain 1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 180
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 1 LKSASAFPVTKKSADFTSLASNGGRVQCMQV 93
LKSASAFPVT+K+ D T+LASNGGRVQCMQV
Sbjct: 30 LKSASAFPVTRKANDITTLASNGGRVQCMQV 60