BLASTX nr result

ID: Rauwolfia21_contig00002626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00002626
         (969 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299693.1| hypothetical protein POPTR_0001s18120g [Popu...    62   3e-07

>ref|XP_002299693.1| hypothetical protein POPTR_0001s18120g [Populus trichocarpa]
           gi|222846951|gb|EEE84498.1| hypothetical protein
           POPTR_0001s18120g [Populus trichocarpa]
          Length = 427

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 34/216 (15%)
 Frame = -3

Query: 931 LRPKPGDPCQNPGLSIWSSETGEWK------------VFDEKFPPLNDRLHMASKVFFKG 788
           L P PGD      L ++SSETG W+            + D +FP LN      + +F  G
Sbjct: 133 LGPLPGDI----ELEVFSSETGAWRNHRPFSLSLNVELPDNEFPELN-----TTPLFSNG 183

Query: 787 SLYWDCLEGHLLVCHLNIVHKQQANFQLIEAPPA----------TLGRCLWKSEVKLHCY 638
           +++W+ + G LLV H+     +    ++IE P            T  RCLW+SE ++H Y
Sbjct: 184 AIHWE-ISGQLLVYHV-----EDDYCEVIELPNVFEDWSWQSTMTYRRCLWESEGRVH-Y 236

Query: 637 CHEITDIFPEWTLEMNDE------------QEFKWSLEDGEQFRALSEDVSGIVPISTGA 494
            +   D    W L   DE            ++F+W+L        L+E    I+ +    
Sbjct: 237 TYTDFDGVHSWNLLKEDEHNVYSHQNVYDREKFRWALAYTINHEDLAEQDPDILSLGDQW 296

Query: 493 RPRLPFKVIAYAPKSKTFFLFISNCLHEYQYTNRRL 386
            PR     IAY   S+T +L +   +  Y   NR L
Sbjct: 297 EPR-NISPIAYVQDSETMYLQLPGIVVAYNTKNRVL 331


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