BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00001096
         (2260 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma c...   613   e-172
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   583   e-164
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   583   e-163
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   415   e-113
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   372   e-100
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   367   1e-98
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   367   2e-98
gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus pe...   364   1e-97
gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma c...   363   2e-97
gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Th...   363   2e-97
gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma c...   363   2e-97
gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma c...   363   2e-97
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   359   2e-96
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   359   3e-96
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   358   6e-96
ref|XP_002312652.1| RNA recognition motif-containing family prot...   321   8e-85
gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlise...   311   1e-81
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu...   285   5e-74
ref|XP_002315647.1| RNA recognition motif-containing family prot...   285   5e-74
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A...   272   5e-70

>gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708838|gb|EOY00735.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 653

 Score =  613 bits (1581), Expect = e-172
 Identities = 341/664 (51%), Positives = 403/664 (60%), Gaps = 10/664 (1%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            D MA+EQIDFG+E+YGG+QKMQY G GAI ALA++EM+              VGEGFL +
Sbjct: 2    DAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQL 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
            QR+EA   P    + G QA K   PE R EA   Q  NIPG + + K+ +   R+PEQ  
Sbjct: 62   QRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQDG 121

Query: 1741 GLAAN---IGP---PPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGK 1580
              A +   +G    P  T    K +  E T  +Q  NMG+QG  +   KVG D    SG 
Sbjct: 122  QPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDP---SG- 177

Query: 1579 VPGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTML 1400
            VP    +    SLN G G  +G P +P +QM     +NVN P+I+E+Q+RP +ENG TML
Sbjct: 178  VPQKIANVPAQSLNSGTGGPQGAPHVPPNQM----GLNVNHPMISENQVRPPIENGPTML 233

Query: 1399 FVGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMN 1220
            FVGELHWWTTD ELESVL+QYG+VKEIKFFDERASGKSKGYCQVEFY+PA+AAACKEGM+
Sbjct: 234  FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMD 293

Query: 1219 GYVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSYPXXX 1040
            GY+FNGRACVVAFA+PQT+KQM A+YMNK Q Q+Q+QPQGRRP NDG GRG   +Y    
Sbjct: 294  GYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNY--QS 350

Query: 1039 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKNMIXXXXXXXXXXXXXXXXXXX 860
                                                 KNM+                   
Sbjct: 351  GDAGRNYGRGGWGRGGQGVVNRSGVGGPMRGRGGVGVKNMVGSSAGVGNGANGGAAYGQG 410

Query: 859  XXXXXXXXXXXGLMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAG 680
                       G+MHPQ MMG GFDPTYMGRG  YGGF GP FPGM+P FPAVN +GLAG
Sbjct: 411  PAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAG 470

Query: 679  VAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGE 500
            VAPHVNPAFF                  GPH GMWTD+SMGGWGG+EHGRRTRESSYGGE
Sbjct: 471  VAPHVNPAFFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGE 530

Query: 499  DNASEYGYGEASHDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXX 329
            D ASEYGYG+A+H+KG RSSGASREKER  +R+WSG+S                      
Sbjct: 531  DGASEYGYGDANHEKG-RSSGASREKERVSDREWSGNSDRRHRDEKERDWDRSEREHREH 589

Query: 328  XXXXEKDGYRDYHHKERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRR 152
                EKD YR++ H+ERD  Y++D DRGQ          AMPEE  RSRSRD DYGKRRR
Sbjct: 590  RYREEKDSYREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRR 649

Query: 151  VPSD 140
            +PS+
Sbjct: 650  LPSE 653


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
            subsp. vesca]
          Length = 646

 Score =  583 bits (1504), Expect = e-164
 Identities = 322/659 (48%), Positives = 385/659 (58%), Gaps = 5/659 (0%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            DPM +EQID+ EE+YGG+QK+QY   GAI ALA++E +              VGEGFL M
Sbjct: 2    DPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQM 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
             R E  LPP    N G QA K N PE R +    QE   PG + E KY S     PEQK 
Sbjct: 62   HRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSS----VPEQKD 117

Query: 1741 GLAANIGPPPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKVPGSAE 1562
                ++ P     A  K +  E TH +Q  NMG+QG+  M   V  DS  ++GK+     
Sbjct: 118  QPPVSVVPEM---ASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIA---- 170

Query: 1561 SATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLFVGELH 1382
            +  +PS+N G      V QMP +QM  +  INVNRP++NE+Q+RP VENG+  LFVGELH
Sbjct: 171  NGPIPSMNSGSNGPPAVQQMPANQM--NMKINVNRPMVNENQIRPPVENGSATLFVGELH 228

Query: 1381 WWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNGYVFNG 1202
            WWTTD ELE VL+Q+G++KEIKFFDERASGKSKGYCQV+FY+PAAA+ACKEGM+GYVFNG
Sbjct: 229  WWTTDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNG 288

Query: 1201 RACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSYPXXXXXXXXX 1022
            RACVVAFA+ QT+KQM  +Y+NK+Q Q Q+QPQGRRPMNDGAGRG   ++          
Sbjct: 289  RACVVAFASSQTLKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGDTGRNFG 348

Query: 1021 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKNMIXXXXXXXXXXXXXXXXXXXXXXXXX 842
                                          A+NM+                         
Sbjct: 349  RGNNWGRGGQGVLNRGPGGGGPGRGRGAMGARNMVGNNAGVGTGANGGGYGQGLGGPGFG 408

Query: 841  XXXXXGLMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVN 662
                  +  P  MMGPGFDPTYMGRG GYGGF GP FPGM+P FP VN MGLAGVAPHVN
Sbjct: 409  GPVGGMMNAP-GMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVN 467

Query: 661  PAFFXXXXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEY 482
            PAFF                  G HA MW D SM GW GEE  RRTRESSYGG+D  SEY
Sbjct: 468  PAFFGRGMATNGMGMMGSSGMEGHHAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEY 527

Query: 481  G-YGEASHDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXXXXXXE 314
            G YGEA+H+K VRSS A RE+ER  ER+W+G+S                          E
Sbjct: 528  GNYGEANHEKPVRSSAAPRERERESEREWTGTSERRHRDEREQDWDRSEREHREPRYKEE 587

Query: 313  KDGYRDYHHKERDRGYENDWDRG-QPXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
            KD YRD+  +ERD  YE+D DRG          +AMPE+ HRSRSRD DYGKRRR+PS+
Sbjct: 588  KDSYRDHRRRERDVAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
            notabilis]
          Length = 636

 Score =  583 bits (1503), Expect = e-163
 Identities = 328/665 (49%), Positives = 395/665 (59%), Gaps = 13/665 (1%)
 Frame = -1

Query: 2095 MADEQIDFGEEDYGGSQKMQYHG-GGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPMQ 1919
            MA++ IDF +E+YGG+QK QY G GGAISALA++E++              VGEGFL +Q
Sbjct: 1    MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60

Query: 1918 RNEA-SLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
            R+EA SLP  +    G QA K NFPE R E    Q+PNIPG + E ++ S+G +FP Q+ 
Sbjct: 61   RSEAPSLPAAAGVGNGLQAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQD 120

Query: 1741 GLAANIGPPPTTDALHKAQA-----PETTHSSQAGNM--GYQGSVAMPQKVGPDSLAMSG 1583
            GL  +           K++A     P+    SQ G +  G+QGS  M   VG DS     
Sbjct: 121  GLKVD----------KKSEAGSMVYPDGASGSQKGRIVAGFQGSKPMLHSVGVDS----S 166

Query: 1582 KVPGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTM 1403
             +PG   +  + + N G    RG+  M G+Q T   N NV+ PI+NE+Q+RP++ENG+TM
Sbjct: 167  DIPGKMVNEPIQAPNSGGAGPRGILPMQGNQTT--VNANVSHPIVNENQIRPSIENGSTM 224

Query: 1402 LFVGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGM 1223
            LFVGELHWWTTD ELESVL+QYG+VKEIKFFDERASGKSKGYCQVE+Y+ AAA ACKEGM
Sbjct: 225  LFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGM 284

Query: 1222 NGYVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSYPXX 1043
            +G+VFNGRACVVAFA+PQT+KQM A YM+K QVQ QSQPQGRRP+NDG GRG   ++   
Sbjct: 285  HGHVFNGRACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSG 344

Query: 1042 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKNMIXXXXXXXXXXXXXXXXXX 863
                                                 AKNM+                  
Sbjct: 345  DGGRNFGRGGWGRGGQGAPNRGPGSGGPMRGRGGAMGAKNMV-----GNNAGVGGGGYGQ 399

Query: 862  XXXXXXXXXXXXGLMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLA 683
                        G+M+PQ MMG GFDPTYMGRG GYGGF+GPAFPGM+P FPAVN MG A
Sbjct: 400  GLAGPPFGGPAGGMMNPQGMMGTGFDPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFA 459

Query: 682  GVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGG 503
             VAPHVNPAFF                  G   GMW D S+GGWGGEEHGRRTRESSYGG
Sbjct: 460  AVAPHVNPAFFGRGMTNNGMGMVGSSLMDGHQGGMWNDPSIGGWGGEEHGRRTRESSYGG 519

Query: 502  EDNASEYGYGEASHDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXX 332
            +D ASEYGYG+ +H+KG R        ERG ERDWSG+S                     
Sbjct: 520  DDGASEYGYGDTNHEKGGR--------ERGSERDWSGNSERRNHEERDQDWDRSQKEQKE 571

Query: 331  XXXXXEKDGYRDYHHKERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRR 155
                  KDG RDY  KER+  YE+DWDRGQ         R + E+ HRSRSRD DYGKRR
Sbjct: 572  HRYREGKDGSRDYRPKERELDYEDDWDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYGKRR 631

Query: 154  RVPSD 140
            R+PS+
Sbjct: 632  RLPSE 636


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  415 bits (1066), Expect = e-113
 Identities = 214/352 (60%), Positives = 253/352 (71%), Gaps = 2/352 (0%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            DP ADEQ+D+G+E+YGGS KMQYHG G I ALAEDEM+              +GEGFL +
Sbjct: 2    DPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQL 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
            QR+E  +P V A N  FQA K +FP SRA     +E  IPG ATE KY  + ++FP+QK 
Sbjct: 62   QRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQKG 121

Query: 1741 GLAANIGPPPTTDALHKAQ--APETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKVPGS 1568
                        DA  KA+  A   T +SQAGN GYQGS+ MPQK+G D +AM  K    
Sbjct: 122  EPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNASE 181

Query: 1567 AESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLFVGE 1388
            A +  + S+ PGP   R VP MP +Q+ SS N+N+N P+I+E+  RP++ENGNTMLFVGE
Sbjct: 182  A-TPLMNSVVPGP---RVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGE 237

Query: 1387 LHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNGYVF 1208
            LHWWTTD ELESVLTQYG VKEIKFFDERASGKSKGYCQVEF++PA+AAACKEGMNGY F
Sbjct: 238  LHWWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNF 297

Query: 1207 NGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            NGRACVVAFATPQTIKQM ++Y NKTQ Q QSQPQGRRPMN+G GRG G +Y
Sbjct: 298  NGRACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRG-GPNY 348



 Score =  298 bits (764), Expect = 5e-78
 Identities = 149/229 (65%), Positives = 159/229 (69%), Gaps = 1/229 (0%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            LMHPQ MMGPGFDP++MGRGAGYGGFSGPAFPGM+PPF AVNPMGL GVAPHVNPAFF  
Sbjct: 420  LMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFFGR 479

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GPH GMWTD+S GGWGGEEHGRRTRESSYGGEDNASEYGYGE S
Sbjct: 480  GMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVS 539

Query: 463  HDKGVRSSGASREKERGQERDWSGSSXXXXXXXXXXXXXXXXXXXXXXXEKDGYRDYHHK 284
            HDKG RSS  SREKERG ERDWSG+S                       E+DGYRDY  K
Sbjct: 540  HDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQK 599

Query: 283  ERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
            ER+  YE D+DRGQ         RA  EE HRSRSRD +YGKRRR PS+
Sbjct: 600  ERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  372 bits (954), Expect = e-100
 Identities = 199/352 (56%), Positives = 241/352 (68%), Gaps = 7/352 (1%)
 Frame = -1

Query: 2095 MADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPMQR 1916
            MA+EQ+D+ +E+YGG+QKM + GGGAISALA+DE++              VGEGFL M R
Sbjct: 1    MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 1915 NEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKSGL 1736
            +EA  P    +   FQA K + P  + EA   Q   IPG + E KY  S   F E+K G 
Sbjct: 61   SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKY--SNPHFHEKKEGP 118

Query: 1735 AANIGPPPTTDA-------LHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKV 1577
             A  GP   + +         K +  E TH +Q  N+G+QGS  +PQK G +   + GK+
Sbjct: 119  MAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKI 178

Query: 1576 PGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLF 1397
               +     P LN G G  R VPQM  +QM    N+NVNRP++NE+Q+RPAV+NG TMLF
Sbjct: 179  ANEST----PVLNSGTGGPRAVPQMLSNQM--GMNVNVNRPMVNENQIRPAVDNGATMLF 232

Query: 1396 VGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNG 1217
            VGELHWWTTD ELESVL+QYG+VKEIKFFDERASGKSKGYCQVEFY+ +AAAACKEGMNG
Sbjct: 233  VGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNG 292

Query: 1216 YVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNG 1061
            Y+FNGRACVVAFA+PQT+KQM A+YMNKT  QAQSQ QGRRPMNDG GRG G
Sbjct: 293  YIFNGRACVVAFASPQTLKQMGASYMNKT--QAQSQSQGRRPMNDGVGRGGG 342



 Score =  282 bits (722), Expect = 4e-73
 Identities = 142/229 (62%), Positives = 157/229 (68%), Gaps = 1/229 (0%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            LMHPQ MMG GFDPTYMGRG  YGGFSG AFPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 419  LMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR 478

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            G HAGMWTD+SMGGWGGEEHGRRTRESSYGG+D AS+YGYGE +
Sbjct: 479  GMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVN 538

Query: 463  HDKGVRSSGASREKERGQERDWSGSSXXXXXXXXXXXXXXXXXXXXXXXEKDGYRDYHHK 284
            H+K  RS+ ASREKERG ERDWSG+S                       EKDGYRD+  +
Sbjct: 539  HEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQR 598

Query: 283  ERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
            ERD   E+DWDRGQ         RA+ +E HRSRSRD DYGKRRR+PS+
Sbjct: 599  ERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  367 bits (942), Expect = 1e-98
 Identities = 192/357 (53%), Positives = 234/357 (65%), Gaps = 7/357 (1%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            D MA+EQID+ EE+YGG+QKMQY GGGAI ALA++E++              VG+G L  
Sbjct: 2    DSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQF 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
            Q+ EA  P     N   Q  K + PE + +A + Q  N+PG + E KY ++G  FP Q  
Sbjct: 62   QQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQND 121

Query: 1741 GLAA----NIGP---PPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSG 1583
               A    N+G    P       K    ETTH +   NMG+QGS + P + G D   M  
Sbjct: 122  VQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNM-- 179

Query: 1582 KVPGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTM 1403
              PG   +   P LNPG    +G   +P +QM    NINVNR ++NE+Q+RP +ENG TM
Sbjct: 180  --PGRVANEPAPVLNPGAAGPQGA-LIPANQM--GVNINVNRAMVNENQIRPPLENGGTM 234

Query: 1402 LFVGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGM 1223
            LFVGELHWWTTD ELESVL+QYG+VKEIKFFDERASGKSKGYCQVEF++ AAAAACK+GM
Sbjct: 235  LFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGM 294

Query: 1222 NGYVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            NG+VFNGR CVVAFA+PQT+KQM A+YMNK Q Q QSQ QGRRPMNDG GRG   +Y
Sbjct: 295  NGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNY 351



 Score =  275 bits (702), Expect = 8e-71
 Identities = 139/232 (59%), Positives = 158/232 (68%), Gaps = 4/232 (1%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +MHPQ MMG GFDPTYMGRG GYGGFSGP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 428  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 486

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GPH GMWTDSSMGGW GEEHGRRTRESSYGG+D AS+YGYGEA+
Sbjct: 487  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEAN 546

Query: 463  HDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXXXXXXEKDGYRDY 293
            H+KG RS+ ASREK+RG ERDWSG++                          EKD YRD 
Sbjct: 547  HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 606

Query: 292  HHKERDRGYENDWDRG-QPXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
              ++RD  Y+++WDRG          RA+P+E HRSRSRD DYGKRRR+PS+
Sbjct: 607  RQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  367 bits (941), Expect = 2e-98
 Identities = 192/357 (53%), Positives = 234/357 (65%), Gaps = 7/357 (1%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            D MA+EQID+ EE+YGG+QKMQY GGGAI ALA++E++              VG+G L  
Sbjct: 2    DSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQF 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
            Q+ EA  P     N   Q  K + PE + +A + Q  N+PG + E KY ++G  FP Q  
Sbjct: 62   QQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQND 121

Query: 1741 GLAA----NIGP---PPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSG 1583
               A    N+G    P       K    ETTH +   NMG+QGS + P + G D   M  
Sbjct: 122  VQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNM-- 179

Query: 1582 KVPGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTM 1403
              PG   +   P LNPG    +G   +P +QM    NINVNR ++NE+Q+RP +ENG TM
Sbjct: 180  --PGRVANEPAPVLNPGAAGPQGA-LIPANQM--GVNINVNRAMVNENQIRPPLENGGTM 234

Query: 1402 LFVGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGM 1223
            LFVGELHWWTTD ELESVL+QYG+VKEIKFFDERASGKSKGYCQVEF++ AAAAACK+GM
Sbjct: 235  LFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGM 294

Query: 1222 NGYVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            NG+VFNGR CVVAFA+PQT+KQM A+YMNK Q Q QSQ QGRRPMNDG GRG   +Y
Sbjct: 295  NGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNY 351



 Score =  275 bits (703), Expect = 6e-71
 Identities = 139/232 (59%), Positives = 158/232 (68%), Gaps = 4/232 (1%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +MHPQ MMG GFDPTYMGRG GYGGFSGP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 428  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 486

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GPH GMWTDSSMGGW GEEHGRRTRESSYGG+D AS+YGYGEA+
Sbjct: 487  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEAN 546

Query: 463  HDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXXXXXXEKDGYRDY 293
            H+KG RS+ ASREK+RG ERDWSG++                          EKD YRD 
Sbjct: 547  HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 606

Query: 292  HHKERDRGYENDWDRG-QPXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
              ++RD  Y+++WDRG          RA+P+E HRSRSRD DYGKRRR+PS+
Sbjct: 607  RQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658


>gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  364 bits (934), Expect = 1e-97
 Identities = 195/348 (56%), Positives = 242/348 (69%)
 Frame = -1

Query: 2095 MADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPMQR 1916
            MA+EQID+ +E+YGG+QK+QY G GAISALA++E +              V EGFL M R
Sbjct: 1    MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60

Query: 1915 NEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKSGL 1736
            +EA LPP    N G QA K +  E+R +A + QE  IPG + + KY S+  +FPEQ+   
Sbjct: 61   SEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ--- 117

Query: 1735 AANIGPPPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKVPGSAESA 1556
                G PP       A+ PE       G+ GY GS  MP  VG DS  ++GK   + ES 
Sbjct: 118  ----GQPPV------AKEPEL------GSTGY-GSTTMPPNVGGDSSDITGKT--ALES- 157

Query: 1555 TLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLFVGELHWW 1376
             +PS+N G     GV QMP +Q+  S  +N NRP+ NE+Q+RP VENG+TMLFVGELHWW
Sbjct: 158  -VPSMNSGTAGPTGVTQMPTNQI--SIKVNANRPMFNENQIRPPVENGSTMLFVGELHWW 214

Query: 1375 TTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNGYVFNGRA 1196
            TTD ELESVL+QYG+VKEIKFFDERASGKSKGYCQVEF++PAAA ACKEGM+GY+FNGRA
Sbjct: 215  TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRA 274

Query: 1195 CVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            CVVAFA+PQT+KQM A+Y++K+Q Q QSQ  GRRPMN+G GRG G +Y
Sbjct: 275  CVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNEGVGRGGGVNY 322



 Score =  281 bits (719), Expect = 9e-73
 Identities = 141/233 (60%), Positives = 158/233 (67%), Gaps = 5/233 (2%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +M+PQ MMG GFDPTYMGRG GYGGF GPAFPGM+  FPAVN MGLAGVAPHVNPAFF  
Sbjct: 398  MMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGR 457

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            G HAGMW D SMGGWGG+EHGRRTRESSYGG+D ASEYGYGEA+
Sbjct: 458  GMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEAN 517

Query: 463  HDKGVRSSGASREKERGQERDWSGSS----XXXXXXXXXXXXXXXXXXXXXXXEKDGYRD 296
            H+KG RS+  SRE+ERG ERDWSG+S                           EKD YRD
Sbjct: 518  HEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRD 577

Query: 295  YHHKERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
            +  +ERD GYE+DWDRGQ         +AMPE+ HRSRSRD DYGKRRR+PS+
Sbjct: 578  HRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630


>gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma cacao]
          Length = 602

 Score =  363 bits (931), Expect = 2e-97
 Identities = 191/356 (53%), Positives = 241/356 (67%), Gaps = 6/356 (1%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            D MA+EQIDFG+E+YGG QKMQY G GAI ALA++EM+              VGEGFL +
Sbjct: 2    DAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQL 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
            QR+EA L P    + G +A +   PE R EA   Q  NIPG + + K+ +   R+PE++ 
Sbjct: 62   QRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKEE 121

Query: 1741 GLAAN-----IGPPPTTDAL-HKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGK 1580
              A N      G  P+  ++  K    E TH  Q  N+G+QG  +   KVG D    SG 
Sbjct: 122  QPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDP---SG- 177

Query: 1579 VPGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTML 1400
            VP    +    SLN G G  +G P +P +QM +    NVN P++NE+Q++P +ENG TML
Sbjct: 178  VPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGT----NVNHPVMNENQVQPPIENGPTML 233

Query: 1399 FVGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMN 1220
            FVGELHWWTTD ELESVL+QYG++KEIKFFDE+ASGKSKGYCQVEFY+P++AA CKEGMN
Sbjct: 234  FVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMN 293

Query: 1219 GYVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            GY+FNGRACVVAFA+PQT+KQM A+YMNK Q Q+Q+QPQGRRP N+G GRG   +Y
Sbjct: 294  GYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNY 348



 Score =  227 bits (578), Expect = 2e-56
 Identities = 107/146 (73%), Positives = 116/146 (79%)
 Frame = -1

Query: 823 LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
           +MHPQ MMG GFDPTYM RG GYGGF GP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 422 MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 643 XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                           GPHAGMWTD+SMGGWGG+EHGRRTRESSYGGED ASEYGYG+A+
Sbjct: 482 GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 463 HDKGVRSSGASREKERGQERDWSGSS 386
           H+KG RSSGASREKER  ER+WSG+S
Sbjct: 542 HEKG-RSSGASREKERVSEREWSGNS 566


>gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  363 bits (931), Expect = 2e-97
 Identities = 191/356 (53%), Positives = 241/356 (67%), Gaps = 6/356 (1%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            D MA+EQIDFG+E+YGG QKMQY G GAI ALA++EM+              VGEGFL +
Sbjct: 2    DAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQL 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
            QR+EA L P    + G +A +   PE R EA   Q  NIPG + + K+ +   R+PE++ 
Sbjct: 62   QRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKEE 121

Query: 1741 GLAAN-----IGPPPTTDAL-HKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGK 1580
              A N      G  P+  ++  K    E TH  Q  N+G+QG  +   KVG D    SG 
Sbjct: 122  QPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDP---SG- 177

Query: 1579 VPGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTML 1400
            VP    +    SLN G G  +G P +P +QM +    NVN P++NE+Q++P +ENG TML
Sbjct: 178  VPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGT----NVNHPVMNENQVQPPIENGPTML 233

Query: 1399 FVGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMN 1220
            FVGELHWWTTD ELESVL+QYG++KEIKFFDE+ASGKSKGYCQVEFY+P++AA CKEGMN
Sbjct: 234  FVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMN 293

Query: 1219 GYVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            GY+FNGRACVVAFA+PQT+KQM A+YMNK Q Q+Q+QPQGRRP N+G GRG   +Y
Sbjct: 294  GYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNY 348



 Score =  268 bits (686), Expect = 6e-69
 Identities = 136/227 (59%), Positives = 152/227 (66%), Gaps = 4/227 (1%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +MHPQ MMG GFDPTYM RG GYGGF GP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GPHAGMWTD+SMGGWGG+EHGRRTRESSYGGED ASEYGYG+A+
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 463  HDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXXXXXXEKDGYRDY 293
            H+KG RSSGASREKER  ER+WSG+S                          EKD YR++
Sbjct: 542  HEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREH 600

Query: 292  HHKERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRR 155
             H+ERD  Y++DWDRGQ          AMPEE HRSRSRD  Y + +
Sbjct: 601  RHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREEK 647


>gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma cacao]
          Length = 697

 Score =  363 bits (931), Expect = 2e-97
 Identities = 191/356 (53%), Positives = 241/356 (67%), Gaps = 6/356 (1%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            D MA+EQIDFG+E+YGG QKMQY G GAI ALA++EM+              VGEGFL +
Sbjct: 2    DAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQL 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
            QR+EA L P    + G +A +   PE R EA   Q  NIPG + + K+ +   R+PE++ 
Sbjct: 62   QRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKEE 121

Query: 1741 GLAAN-----IGPPPTTDAL-HKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGK 1580
              A N      G  P+  ++  K    E TH  Q  N+G+QG  +   KVG D    SG 
Sbjct: 122  QPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDP---SG- 177

Query: 1579 VPGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTML 1400
            VP    +    SLN G G  +G P +P +QM +    NVN P++NE+Q++P +ENG TML
Sbjct: 178  VPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGT----NVNHPVMNENQVQPPIENGPTML 233

Query: 1399 FVGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMN 1220
            FVGELHWWTTD ELESVL+QYG++KEIKFFDE+ASGKSKGYCQVEFY+P++AA CKEGMN
Sbjct: 234  FVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMN 293

Query: 1219 GYVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            GY+FNGRACVVAFA+PQT+KQM A+YMNK Q Q+Q+QPQGRRP N+G GRG   +Y
Sbjct: 294  GYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNY 348



 Score =  256 bits (655), Expect = 2e-65
 Identities = 142/277 (51%), Positives = 158/277 (57%), Gaps = 49/277 (17%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +MHPQ MMG GFDPTYM RG GYGGF GP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GPHAGMWTD+SMGGWGG+EHGRRTRESSYGGED ASEYGYG+A+
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 463  HDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXXXXXXEKDGYRDY 293
            H+KG RSSGASREKER  ER+WSG+S                          EKD YR++
Sbjct: 542  HEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREH 600

Query: 292  HH---------------------------------------------KERDRGYENDWDR 248
             H                                             +ERD  Y++D DR
Sbjct: 601  RHREREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDDLDR 660

Query: 247  GQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
            GQ          AMPEE  RSRSRD DYGKRRR+PS+
Sbjct: 661  GQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 697


>gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708840|gb|EOY00737.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708841|gb|EOY00738.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 652

 Score =  363 bits (931), Expect = 2e-97
 Identities = 191/356 (53%), Positives = 241/356 (67%), Gaps = 6/356 (1%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            D MA+EQIDFG+E+YGG QKMQY G GAI ALA++EM+              VGEGFL +
Sbjct: 2    DAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQL 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKS 1742
            QR+EA L P    + G +A +   PE R EA   Q  NIPG + + K+ +   R+PE++ 
Sbjct: 62   QRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKEE 121

Query: 1741 GLAAN-----IGPPPTTDAL-HKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGK 1580
              A N      G  P+  ++  K    E TH  Q  N+G+QG  +   KVG D    SG 
Sbjct: 122  QPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDP---SG- 177

Query: 1579 VPGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTML 1400
            VP    +    SLN G G  +G P +P +QM +    NVN P++NE+Q++P +ENG TML
Sbjct: 178  VPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGT----NVNHPVMNENQVQPPIENGPTML 233

Query: 1399 FVGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMN 1220
            FVGELHWWTTD ELESVL+QYG++KEIKFFDE+ASGKSKGYCQVEFY+P++AA CKEGMN
Sbjct: 234  FVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMN 293

Query: 1219 GYVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            GY+FNGRACVVAFA+PQT+KQM A+YMNK Q Q+Q+QPQGRRP N+G GRG   +Y
Sbjct: 294  GYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNY 348



 Score =  285 bits (729), Expect = 6e-74
 Identities = 143/232 (61%), Positives = 160/232 (68%), Gaps = 4/232 (1%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +MHPQ MMG GFDPTYM RG GYGGF GP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GPHAGMWTD+SMGGWGG+EHGRRTRESSYGGED ASEYGYG+A+
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 463  HDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXXXXXXEKDGYRDY 293
            H+KG RSSGASREKER  ER+WSG+S                          EKD YR++
Sbjct: 542  HEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREH 600

Query: 292  HHKERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
             H+ERD  Y++DWDRGQ          AMPEE HRSRSRD DYGK+RR+PS+
Sbjct: 601  RHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  359 bits (922), Expect = 2e-96
 Identities = 194/350 (55%), Positives = 236/350 (67%), Gaps = 2/350 (0%)
 Frame = -1

Query: 2095 MADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPMQR 1916
            MADEQID+ +E+YGG+QK+QY G GAI ALAE+EM               +GE FL M R
Sbjct: 1    MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHR 59

Query: 1915 NEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQ--KS 1742
            +EA   P S  N GFQ    N  + R E+   Q  NIPG A E+KY S+G  FPEQ  K 
Sbjct: 60   SEAPPAPPSVGNGGFQPRNSN--DLRVESGGSQGLNIPGVAVESKY-STGTHFPEQNVKG 116

Query: 1741 GLAANIGPPPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKVPGSAE 1562
                ++G P  +    K +  E T+ SQA NMG+QGS + P  +G D   M+ K+     
Sbjct: 117  PEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISND-- 174

Query: 1561 SATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLFVGELH 1382
                P+  P  G  R +PQ+P  QM  + N++ NR   NE+Q+RP +ENG+TML+VGELH
Sbjct: 175  ----PTPVPNAGVPRVIPQLPASQM--NMNMDTNRSATNENQIRPPLENGSTMLYVGELH 228

Query: 1381 WWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNGYVFNG 1202
            WWTTD ELE+VL+QYG VKEIKFFDERASGKSKGYCQVEFY+ AAAAACKEGMNG++FNG
Sbjct: 229  WWTTDAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNG 288

Query: 1201 RACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            RACVVAFA+ QT+KQM A+YMNK Q Q QSQ QGRRPMNDGAGRG   +Y
Sbjct: 289  RACVVAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNY 338



 Score =  272 bits (696), Expect = 4e-70
 Identities = 140/232 (60%), Positives = 160/232 (68%), Gaps = 4/232 (1%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            ++ PQ+MM  GFDPTYMGRGAGYGGF+GP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 414  MLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 473

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GP+AGMW+D+SMGGW GEE GRRTRESSYGG+D ASEYGYGE +
Sbjct: 474  GMAPNGMGMMGPSGMDGPNAGMWSDTSMGGW-GEEPGRRTRESSYGGDDGASEYGYGEVN 532

Query: 463  HDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXXXXXXEKDGYRDY 293
            H+KG RSS ASREKER  ERDWSG+S                          EK+ YRD+
Sbjct: 533  HEKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDH 592

Query: 292  HHKERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
              +ERD GYE+DWDRGQ         RA+PEE +RSRSRDADYGKRRR+PS+
Sbjct: 593  RQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  359 bits (921), Expect = 3e-96
 Identities = 190/355 (53%), Positives = 230/355 (64%), Gaps = 7/355 (1%)
 Frame = -1

Query: 2095 MADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPMQR 1916
            MA+EQID+ E++YGG+QKMQY GGGAI ALA++E++              VG+G L  Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 1915 NEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKSGL 1736
             EA  P     N   Q  K + PE R +    Q  NIPG + E KY ++G  FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQ 120

Query: 1735 AA----NIGP---PPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKV 1577
             A    N+G    P       K    ETTH +   NMG+QGS + P + G D   M    
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNM---- 176

Query: 1576 PGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLF 1397
            PG A +   P LNPG    +G   +P +QM    N NVNR ++NE+Q+RP +ENG TMLF
Sbjct: 177  PGRAANEPAPVLNPGAAGPQGA-LIPANQM--GVNANVNRVMVNENQIRPPLENGGTMLF 233

Query: 1396 VGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNG 1217
            VGELHWWTTD ELESVL+QYG+ KEIKFFDERASGKSKGYCQVEF++ AAAAACK+GMNG
Sbjct: 234  VGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNG 293

Query: 1216 YVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            +VFNGR CVVAFA+PQT+KQM A+YMNK Q Q QSQ QG RPMNDG GRG  T+Y
Sbjct: 294  HVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNY 348



 Score =  277 bits (709), Expect = 1e-71
 Identities = 140/232 (60%), Positives = 158/232 (68%), Gaps = 4/232 (1%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +MHPQ MMG GFDPTYMGRG GYGGFSGP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 425  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GPH GMWTDSSMGGW GEEHGRRTRESSYGG+D AS+YGYGEAS
Sbjct: 484  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEAS 543

Query: 463  HDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXXXXXXEKDGYRDY 293
            H+KG RS+ ASREK+RG ERDWSG++                          EKD YRD 
Sbjct: 544  HEKGARSTTASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 603

Query: 292  HHKERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
              ++RD  Y+++WDRGQ          A+P+E HRSRSRD DYGKRRR+PS+
Sbjct: 604  RQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  358 bits (919), Expect = 6e-96
 Identities = 189/355 (53%), Positives = 229/355 (64%), Gaps = 7/355 (1%)
 Frame = -1

Query: 2095 MADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPMQR 1916
            MA+EQID+ E++YGG+QKMQY GGGAI ALA++E++              VG+G L  Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 1915 NEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQKSGL 1736
             EA  P     N   Q  K + PE R +    Q  NIPG + E KY ++G  FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120

Query: 1735 AA----NIGP---PPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKV 1577
             A    N+G    P       K    ETTH +   NMG+QGS + P + G D   M    
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNM---- 176

Query: 1576 PGSAESATLPSLNPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLF 1397
            PG   +   P LNPG    +G   +P +QM    N NVNR ++NE+Q+RP +ENG TMLF
Sbjct: 177  PGRVANEPAPVLNPGAAGPQGA-LIPANQM--GVNANVNRVMVNENQIRPPLENGGTMLF 233

Query: 1396 VGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNG 1217
            VGELHWWTTD ELESVL+QYG+ KEIKFFDERASGKSKGYCQVEF++ AAAAACK+GMNG
Sbjct: 234  VGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNG 293

Query: 1216 YVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            +VFNGR CVVAFA+PQT+KQM A+YMNK Q Q QSQ QG RPMNDG GRG  T+Y
Sbjct: 294  HVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNY 348



 Score =  276 bits (707), Expect = 2e-71
 Identities = 139/232 (59%), Positives = 158/232 (68%), Gaps = 4/232 (1%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +MHPQ MMG GFDPTYMGRG GYGGFSGP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 425  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GPH GMWTDSSMGGW GEEHGRRTRESSYGG+D AS+YGYGEA+
Sbjct: 484  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEAN 543

Query: 463  HDKGVRSSGASREKERGQERDWSGSS---XXXXXXXXXXXXXXXXXXXXXXXEKDGYRDY 293
            H+KG RS+ ASREK+RG ERDWSG++                          EKD YRD 
Sbjct: 544  HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 603

Query: 292  HHKERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
              ++RD  Y+++WDRGQ          A+P+E HRSRSRD DYGKRRR+PS+
Sbjct: 604  RQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222852472|gb|EEE90019.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  321 bits (823), Expect = 8e-85
 Identities = 182/343 (53%), Positives = 217/343 (63%), Gaps = 6/343 (1%)
 Frame = -1

Query: 2062 DYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPMQRNEASLPPVSAS 1883
            DY   +KMQY G GAI ALAE+EM               VGE FL M  +EA  PP +  
Sbjct: 2    DYEEEEKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVG 60

Query: 1882 NMGFQAPKGNFPESRAEATMLQEPNIPGG--ATEAKYGSSGLRFPEQKSGLAA----NIG 1721
            N GFQ    N  ESR E    Q   I GG  A E  Y ++   FPEQK    A    ++G
Sbjct: 61   NGGFQTR--NAHESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVG 118

Query: 1720 PPPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKVPGSAESATLPSL 1541
            P   +    K +  E +H  Q  NMG+Q S  +P  +G D   MS K   + E   LP  
Sbjct: 119  PVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRK--NAIEPEPLPIT 176

Query: 1540 NPGPGSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLFVGELHWWTTDVE 1361
              G    RG PQM  +QM  SA+  VNRP++NE+Q+RP +ENG+T L+VGELHWWTTD E
Sbjct: 177  --GSAGPRGAPQMQVNQMHMSAD--VNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAE 232

Query: 1360 LESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNGYVFNGRACVVAF 1181
            LES  +Q+G+VKEIKFFDERASGKSKGYCQV+FYE AAAAACKEGMNG+VFNGR CVVAF
Sbjct: 233  LESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAF 292

Query: 1180 ATPQTIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            A+PQT+KQM A+YMNKTQ Q Q+Q QGR  MNDGAGRG   ++
Sbjct: 293  ASPQTLKQMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANF 335



 Score =  227 bits (578), Expect = 2e-56
 Identities = 121/229 (52%), Positives = 137/229 (59%), Gaps = 1/229 (0%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +M PQ MMG GFDP YMGRG GYGGF+GP FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 409  MMPPQGMMGAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFAR 468

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GP+ GMW                  ESSY G++ ASEYGYGE +
Sbjct: 469  GMAPNGMGMMVSSGMDGPNPGMW------------------ESSYDGDEGASEYGYGEGN 510

Query: 463  HDKGVRSSGASREKERGQERDWSGSSXXXXXXXXXXXXXXXXXXXXXXXEKDGYRDYHHK 284
            H+KG RSSGASREKERG ERDWSG+S                       EKD YR +  +
Sbjct: 511  HEKGARSSGASREKERGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYRGHRQR 570

Query: 283  ERDRGYENDWDRG-QPXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
            ERD GYE+D DRG          RA PEE +RSR+RD DYGKRRR+PS+
Sbjct: 571  ERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRRRLPSE 619


>gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlisea aurea]
          Length = 508

 Score =  311 bits (796), Expect = 1e-81
 Identities = 182/354 (51%), Positives = 219/354 (61%), Gaps = 4/354 (1%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXV-GEGFLP 1925
            +PM  EQ DFGEE+YGG QKMQY+ GGAI ALA++EMI                GE F+ 
Sbjct: 2    EPMNGEQFDFGEEEYGGGQKMQYNQGGAIPALADEEMIGEEDDEYDDLYNDVNVGESFMQ 61

Query: 1924 MQRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPGGATEAKYGSSGLRFPEQK 1745
            +QR ++ +PP  A N    +  G+      E+   +E N    A    +G   L+FPEQK
Sbjct: 62   VQRPDSQIPPFKAENRVNPSGTGD------ESIPSEEANASKYAGNRAFGPGALQFPEQK 115

Query: 1744 SGLAANIGPPPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKVPGSA 1565
            +GL        T D        +T  +SQ    GYQGSVA P     D +    K  G  
Sbjct: 116  AGLNTTEETSVTVDR------SQTVRNSQTDQSGYQGSVA-PNNKTEDQVKNMDKTVGDP 168

Query: 1564 ESATLPSLNPGPG-SSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLFVGE 1388
             S     +NP  G  S+G   +P + M  +AN N  RP+ +E     + ENGNTML+VGE
Sbjct: 169  SS-----INPNVGVGSKGA--VPFNFMNMAANANAIRPVDDEYSNLGSSENGNTMLYVGE 221

Query: 1387 LHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNGYVF 1208
            LHWWTTD E+ESVL QYGKVKEIKFFDERASGKSKGYCQVEF++PAAA ACKEGMNGYVF
Sbjct: 222  LHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFFDPAAAHACKEGMNGYVF 281

Query: 1207 NGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRR-PMND-GAGRGNGTSY 1052
            NGRACVVAFATPQTIKQM A+YMN+ Q Q Q+Q  GR   MND GAGRG GT++
Sbjct: 282  NGRACVVAFATPQTIKQMGASYMNRNQGQPQAQFPGRNAAMNDGGAGRGVGTNF 335



 Score =  140 bits (353), Expect = 2e-30
 Identities = 69/109 (63%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
 Frame = -1

Query: 823 LMHPQAMMGPGFDPTYMGRGAGYGG-FSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFX 647
           +MHPQ MMGPGFD  +MGRGAGYGG F+GPAFPGM+PPFPAVN +GL GVAPHVNPAFF 
Sbjct: 401 MMHPQGMMGPGFDLAFMGRGAGYGGGFTGPAFPGMLPPFPAVNTLGLPGVAPHVNPAFFG 460

Query: 646 XXXXXXXXXXXXXXXXXGPHAGMWTDSSM-GGWGGEEHGRRTRESSYGG 503
                            GP++G+W D+S+ GGWGGEE GR   ESSYGG
Sbjct: 461 RGMAPNGMGMMGPSGMGGPYSGLWNDASVGGGWGGEEQGRGP-ESSYGG 508


>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
            gi|550329195|gb|ERP56065.1| hypothetical protein
            POPTR_0010s06150g [Populus trichocarpa]
          Length = 591

 Score =  285 bits (730), Expect = 5e-74
 Identities = 170/339 (50%), Positives = 205/339 (60%), Gaps = 2/339 (0%)
 Frame = -1

Query: 2062 DYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPMQRNEASLPPVSAS 1883
            D+   +KMQY G GAI ALAE+E+               VGE FL M  +EA  PP +A 
Sbjct: 2    DFEEEEKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAG 60

Query: 1882 NMGFQAPKGNFPESRAEA--TMLQEPNIPGGATEAKYGSSGLRFPEQKSGLAANIGPPPT 1709
            N GFQ    N  ESR E   + +   +  G A E KY ++G  FPEQK    A IG    
Sbjct: 61   NGGFQTR--NAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQ---AGIG---- 111

Query: 1708 TDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKVPGSAESATLPSLNPGP 1529
                          ++  G++GY    ++ QK             GSA          GP
Sbjct: 112  ------------VEANDVGSIGYGDGSSVAQK-------------GSA----------GP 136

Query: 1528 GSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLFVGELHWWTTDVELESV 1349
               RGVPQM  +QM  + N +VNRP++NE+Q+RP +ENG T L+VGELHWWTTD ELESV
Sbjct: 137  ---RGVPQMQVNQM--NMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESV 191

Query: 1348 LTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNGYVFNGRACVVAFATPQ 1169
             +QYG+VKEIKFFDERASGKSKGYCQV+FYE AAAAACKEGMN +VFNGR CVVAFA+ Q
Sbjct: 192  ASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQ 251

Query: 1168 TIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            T+KQM A+YM+KTQ Q Q Q QGR  MNDG GRG   +Y
Sbjct: 252  TLKQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANY 290



 Score =  253 bits (646), Expect = 3e-64
 Identities = 133/229 (58%), Positives = 147/229 (64%), Gaps = 1/229 (0%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
            +MH Q MMG GFDP YMGRG GYGGF G  FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 364  MMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFAR 423

Query: 643  XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                            GP+ G W D+SMGGW GEE GRRTRESSY G++ ASEYGYGE +
Sbjct: 424  GMAPNGMGMMASSGMEGPNPGKWPDTSMGGW-GEEPGRRTRESSYDGDEGASEYGYGEGN 482

Query: 463  HDKGVRSSGASREKERGQERDWSGSSXXXXXXXXXXXXXXXXXXXXXXXEKDGYRDYHHK 284
            H+KG RSSGASREKER  ERDWSG+S                       EKD YR +  +
Sbjct: 483  HEKGARSSGASREKERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQR 542

Query: 283  ERDRGYENDWDRG-QPXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
            ERD GYE+D DRG          RA PEE +RSRSRD DYGKRRR PS+
Sbjct: 543  ERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 591


>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222864687|gb|EEF01818.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 573

 Score =  285 bits (730), Expect = 5e-74
 Identities = 170/339 (50%), Positives = 205/339 (60%), Gaps = 2/339 (0%)
 Frame = -1

Query: 2062 DYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPMQRNEASLPPVSAS 1883
            D+   +KMQY G GAI ALAE+E+               VGE FL M  +EA  PP +A 
Sbjct: 2    DFEEEEKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAG 60

Query: 1882 NMGFQAPKGNFPESRAEA--TMLQEPNIPGGATEAKYGSSGLRFPEQKSGLAANIGPPPT 1709
            N GFQ    N  ESR E   + +   +  G A E KY ++G  FPEQK    A IG    
Sbjct: 61   NGGFQTR--NAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQ---AGIG---- 111

Query: 1708 TDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSLAMSGKVPGSAESATLPSLNPGP 1529
                          ++  G++GY    ++ QK             GSA          GP
Sbjct: 112  ------------VEANDVGSIGYGDGSSVAQK-------------GSA----------GP 136

Query: 1528 GSSRGVPQMPGDQMTSSANINVNRPIINESQMRPAVENGNTMLFVGELHWWTTDVELESV 1349
               RGVPQM  +QM  + N +VNRP++NE+Q+RP +ENG T L+VGELHWWTTD ELESV
Sbjct: 137  ---RGVPQMQVNQM--NMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESV 191

Query: 1348 LTQYGKVKEIKFFDERASGKSKGYCQVEFYEPAAAAACKEGMNGYVFNGRACVVAFATPQ 1169
             +QYG+VKEIKFFDERASGKSKGYCQV+FYE AAAAACKEGMN +VFNGR CVVAFA+ Q
Sbjct: 192  ASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQ 251

Query: 1168 TIKQMAANYMNKTQVQAQSQPQGRRPMNDGAGRGNGTSY 1052
            T+KQM A+YM+KTQ Q Q Q QGR  MNDG GRG   +Y
Sbjct: 252  TLKQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANY 290



 Score =  214 bits (545), Expect = 1e-52
 Identities = 120/229 (52%), Positives = 133/229 (58%), Gaps = 1/229 (0%)
 Frame = -1

Query: 823 LMHPQAMMGPGFDPTYMGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAFFXX 644
           +MH Q MMG GFDP YMGRG GYGGF G  FPGM+P FPAVN MGLAGVAPHVNPAFF  
Sbjct: 364 MMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFAR 423

Query: 643 XXXXXXXXXXXXXXXXGPHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 464
                               GM   S M G          +ESSY G++ ASEYGYGE +
Sbjct: 424 GMAPNG-------------MGMMASSGMEG------PNPGKESSYDGDEGASEYGYGEGN 464

Query: 463 HDKGVRSSGASREKERGQERDWSGSSXXXXXXXXXXXXXXXXXXXXXXXEKDGYRDYHHK 284
           H+KG RSSGASREKER  ERDWSG+S                       EKD YR +  +
Sbjct: 465 HEKGARSSGASREKERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQR 524

Query: 283 ERDRGYENDWDRG-QPXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
           ERD GYE+D DRG          RA PEE +RSRSRD DYGKRRR PS+
Sbjct: 525 ERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 573


>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
            gi|548855834|gb|ERN13697.1| hypothetical protein
            AMTR_s00049p00146760 [Amborella trichopoda]
          Length = 659

 Score =  272 bits (695), Expect = 5e-70
 Identities = 170/374 (45%), Positives = 216/374 (57%), Gaps = 24/374 (6%)
 Frame = -1

Query: 2101 DPMADEQIDFGEEDYGGSQKMQYHGGGAISALAEDEMINXXXXXXXXXXXXXVGEGFLPM 1922
            DPMA+EQ+D+ +EDYG +QKM +  GGAISALA++E++              VG+GF+  
Sbjct: 2    DPMAEEQLDYEDEDYGANQKMPFQTGGAISALADEELMGEDDEYDDLYNDVNVGDGFMQS 61

Query: 1921 QRNEASLPPVSASNMGFQAPKGNFPESRAEATMLQEPNIPG------GATEAKY-GSSGL 1763
             +++  +   S  N G QAPK        E       NIPG      G  +AK  G S L
Sbjct: 62   LQHQEPVQYESMGN-GVQAPK-------EEPISTPPVNIPGVGHEEKGEKDAKLSGFSDL 113

Query: 1762 ----RFPEQKSGLAANIGPPPTTDALHKAQAPETTHSSQAGNMGYQGSVAMPQKVGPDSL 1595
                 F EQ S   A         +  K +  E     Q    G++ + A P K    + 
Sbjct: 114  DQKKAFQEQASNQLAG------ASSGLKIRVSEPVSEPQPQASGFRNAPAPPAKGSGFNT 167

Query: 1594 AMS---GKVPGSAESATLPSLNPGPGSSRGV-PQMPGDQMT------SSANINVNRPIIN 1445
            A +    K      S  +P + PGPG   G  P    ++M       + A I+ +    +
Sbjct: 168  AGAMDANKQLAQTSSNAVPRVGPGPGPGIGAGPNANMNRMMGPGPNQAGAVIDTSARFGS 227

Query: 1444 ESQMRPAV---ENGNTMLFVGELHWWTTDVELESVLTQYGKVKEIKFFDERASGKSKGYC 1274
            E+  R +    E+GNTMLFVGEL WWTTD ELESVL+QYG+VK++KFFDERASGKSKGYC
Sbjct: 228  ENSNRLSHGGGESGNTMLFVGELQWWTTDAELESVLSQYGRVKDLKFFDERASGKSKGYC 287

Query: 1273 QVEFYEPAAAAACKEGMNGYVFNGRACVVAFATPQTIKQMAANYMNKTQVQAQSQPQGRR 1094
            QVEFY+PAAAAACKE MNG+VFNGRACVVAFA+  T+KQ+  NY+NKTQ QAQ+Q QGRR
Sbjct: 288  QVEFYDPAAAAACKESMNGHVFNGRACVVAFASQHTLKQLTTNYLNKTQAQAQAQSQGRR 347

Query: 1093 PMNDGAGRGNGTSY 1052
            PMNDG GR  G SY
Sbjct: 348  PMNDGGGRAGGPSY 361



 Score =  226 bits (576), Expect = 3e-56
 Identities = 123/235 (52%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
 Frame = -1

Query: 823  LMHPQAMMGPGFDPTY---MGRGAGYGGFSGPAFPGMIPPFPAVNPMGLAGVAPHVNPAF 653
            L+HPQ MMG GFDPTY   +GRG+GYGGFSGP FPGM+P F  +  +GL GVAPHVNPAF
Sbjct: 429  LLHPQGMMGSGFDPTYGAHLGRGSGYGGFSGPHFPGMLPSFSPMGTVGLPGVAPHVNPAF 488

Query: 652  FXXXXXXXXXXXXXXXXXXGPHAGMWTDSSMG---GWGGEEHGRRTRESSYGGEDNASEY 482
            F                  G H GMW DSSMG   GWG EEHGRRTRESSY G+D AS+Y
Sbjct: 489  FGRGVSANGMGMMGSGAMDGHHGGMWGDSSMGGGVGWGNEEHGRRTRESSY-GDDGASDY 547

Query: 481  GYGEASHDKGVRSSGASREKERGQERDWSGSSXXXXXXXXXXXXXXXXXXXXXXXEKDGY 302
            GYG+  H++G   S   REK+RG ERDWS                          EKDGY
Sbjct: 548  GYGDGGHERGGGRSNPGREKDRGSERDWSSG---PERRHRDDRDSDWDRDPRYKDEKDGY 604

Query: 301  RDYHHKERDRGYENDWDRGQ-PXXXXXXXRAMPEEVHRSRSRDADYGKRRRVPSD 140
             D+  +ERD   E+DWDRG+         R M EE  RSRS+D DYGKRRRVPS+
Sbjct: 605  SDHRQRERDWDNEDDWDRGRTSSRSRSKSRMMQEEDQRSRSKDVDYGKRRRVPSE 659