BLASTX nr result
ID: Rauwolfia21_contig00000967
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00000967 (273 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi... 63 5e-08 ref|XP_006350998.1| PREDICTED: F-box protein SKIP5-like [Solanum... 62 8e-08 ref|XP_002513076.1| conserved hypothetical protein [Ricinus comm... 57 2e-06 ref|XP_004142419.1| PREDICTED: F-box protein SKIP5-like [Cucumis... 55 1e-05 >ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi|15777895|gb|AAL05932.1| SKIP5-like protein [Solanum lycopersicum] Length = 265 Score = 62.8 bits (151), Expect = 5e-08 Identities = 28/40 (70%), Positives = 33/40 (82%) Frame = -3 Query: 121 MEAETRKWKRFAKQSTANSHVNNLDDGCLMHIFSFLSPIP 2 ME + RKW+R +K ST S +N+LDDGCLMHIFSFLSPIP Sbjct: 1 MEVQKRKWRRISKISTDISLINSLDDGCLMHIFSFLSPIP 40 >ref|XP_006350998.1| PREDICTED: F-box protein SKIP5-like [Solanum tuberosum] Length = 265 Score = 62.0 bits (149), Expect = 8e-08 Identities = 28/40 (70%), Positives = 32/40 (80%) Frame = -3 Query: 121 MEAETRKWKRFAKQSTANSHVNNLDDGCLMHIFSFLSPIP 2 ME + RKW+R +K ST S +N LDDGCLMHIFSFLSPIP Sbjct: 1 MEEQKRKWRRISKISTDFSLINRLDDGCLMHIFSFLSPIP 40 >ref|XP_002513076.1| conserved hypothetical protein [Ricinus communis] gi|223548087|gb|EEF49579.1| conserved hypothetical protein [Ricinus communis] Length = 250 Score = 57.4 bits (137), Expect = 2e-06 Identities = 27/39 (69%), Positives = 30/39 (76%) Frame = -3 Query: 118 EAETRKWKRFAKQSTANSHVNNLDDGCLMHIFSFLSPIP 2 +AE KWKR K+ N +NNLDDGCLMHIFSFLSPIP Sbjct: 3 KAEKGKWKRKKKEGD-NCRINNLDDGCLMHIFSFLSPIP 40 >ref|XP_004142419.1| PREDICTED: F-box protein SKIP5-like [Cucumis sativus] Length = 272 Score = 55.1 bits (131), Expect = 1e-05 Identities = 27/39 (69%), Positives = 31/39 (79%) Frame = -3 Query: 118 EAETRKWKRFAKQSTANSHVNNLDDGCLMHIFSFLSPIP 2 E + RKWKR S++ S VN+LDDGCLMHIFSFLSPIP Sbjct: 23 ENKQRKWKRKGTSSSSPS-VNSLDDGCLMHIFSFLSPIP 60