BLASTX nr result
ID: Rauwolfia21_contig00000524
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00000524
(277 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004234481.1| PREDICTED: polyadenylate-binding protein RBP... 65 4e-20
ref|XP_006343293.1| PREDICTED: polyadenylate-binding protein RBP... 65 4e-19
ref|XP_006352617.1| PREDICTED: polyadenylate-binding protein RBP... 59 4e-18
ref|XP_006352618.1| PREDICTED: polyadenylate-binding protein RBP... 59 4e-18
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP... 60 4e-17
gb|EMJ13168.1| hypothetical protein PRUPE_ppa006617mg [Prunus pe... 57 1e-16
ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP... 59 2e-16
ref|XP_006468021.1| PREDICTED: polyadenylate-binding protein RBP... 57 2e-16
ref|XP_006449038.1| hypothetical protein CICLE_v10015407mg [Citr... 57 2e-16
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ... 55 8e-16
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera] 55 8e-16
gb|EOY28669.1| RNA-binding family protein [Theobroma cacao] 54 2e-15
ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group] g... 57 4e-15
gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indi... 57 4e-15
gb|ABF97193.1| RNA recognition motif family protein, expressed [... 57 4e-15
gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sa... 57 4e-15
gb|EXB50295.1| Polyadenylate-binding protein RBP45 [Morus notabi... 56 7e-15
ref|XP_004295261.1| PREDICTED: polyadenylate-binding protein RBP... 58 1e-14
emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris] 62 2e-14
sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding prot... 56 2e-14
>ref|XP_004234481.1| PREDICTED: polyadenylate-binding protein RBP45-like [Solanum
lycopersicum]
Length = 405
Score = 65.1 bits (157), Expect(2) = 4e-20
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
ASYQ T GTQNEDDPSNTT+FVGNLD+NVTD+H
Sbjct: 254 ASYQSTNGTQNEDDPSNTTIFVGNLDANVTDDH 286
Score = 58.5 bits (140), Expect(2) = 4e-20
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 4 AMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGSQEA 111
AMTEMNG+FCSTRPMRIGPAANKK+V Q + S ++
Sbjct: 223 AMTEMNGKFCSTRPMRIGPAANKKSVPGQVQASYQS 258
>ref|XP_006343293.1| PREDICTED: polyadenylate-binding protein RBP45-like [Solanum
tuberosum]
Length = 411
Score = 65.1 bits (157), Expect(2) = 4e-19
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
ASYQ T GTQNEDDPSNTT+FVGNLD+NVTD+H
Sbjct: 260 ASYQSTNGTQNEDDPSNTTIFVGNLDANVTDDH 292
Score = 55.1 bits (131), Expect(2) = 4e-19
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 4 AMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGSQEA 111
AMTEMNG+FCSTRPMRIG AANKK+V Q + S ++
Sbjct: 229 AMTEMNGKFCSTRPMRIGHAANKKSVPGQVQASYQS 264
>ref|XP_006352617.1| PREDICTED: polyadenylate-binding protein RBP45-like isoform X1
[Solanum tuberosum]
Length = 412
Score = 59.3 bits (142), Expect(2) = 4e-18
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 4 AMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGSQEA 111
AMTEMNG+FCSTRPMRIGPAANKK G Q + S ++
Sbjct: 228 AMTEMNGKFCSTRPMRIGPAANKKNAGGQMQASYQS 263
Score = 57.4 bits (137), Expect(2) = 4e-18
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
ASYQ T GTQNEDDP+NTT+FVGNLD++VTD+H
Sbjct: 259 ASYQST-GTQNEDDPTNTTIFVGNLDASVTDDH 290
>ref|XP_006352618.1| PREDICTED: polyadenylate-binding protein RBP45-like isoform X2
[Solanum tuberosum]
Length = 411
Score = 59.3 bits (142), Expect(2) = 4e-18
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 4 AMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGSQEA 111
AMTEMNG+FCSTRPMRIGPAANKK G Q + S ++
Sbjct: 228 AMTEMNGKFCSTRPMRIGPAANKKNAGGQMQASYQS 263
Score = 57.4 bits (137), Expect(2) = 4e-18
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
ASYQ T GTQNEDDP+NTT+FVGNLD++VTD+H
Sbjct: 259 ASYQST-GTQNEDDPTNTTIFVGNLDASVTDDH 290
>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus] gi|449472157|ref|XP_004153511.1| PREDICTED:
polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 60.1 bits (144), Expect(2) = 4e-17
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +3
Query: 180 SYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
SYQ GTQNE+DP+NTT+FVGNLDSNVTDEH
Sbjct: 249 SYQNPPGTQNENDPNNTTIFVGNLDSNVTDEH 280
Score = 53.5 bits (127), Expect(2) = 4e-17
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQ 90
RAMTEMNG CS+RPMRIGPAANK T GSQ
Sbjct: 214 RAMTEMNGVHCSSRPMRIGPAANKNTSGSQ 243
>gb|EMJ13168.1| hypothetical protein PRUPE_ppa006617mg [Prunus persica]
Length = 403
Score = 57.0 bits (136), Expect(2) = 1e-16
Identities = 23/32 (71%), Positives = 29/32 (90%)
Frame = +3
Query: 180 SYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
SYQ +QG++NE DP+NTT+FVGNLD NVTD+H
Sbjct: 250 SYQNSQGSKNESDPNNTTIFVGNLDGNVTDDH 281
Score = 54.7 bits (130), Expect(2) = 1e-16
Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQ--TKGSQE 108
RAMTEMNG CSTRPMRIGPAANK GSQ +KGS +
Sbjct: 215 RAMTEMNGVLCSTRPMRIGPAANKNAGGSQQYSKGSYQ 252
>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 59.3 bits (142), Expect(2) = 2e-16
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 180 SYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
SYQ QG QNE+DP+NTT+FVGNLD+NVTDEH
Sbjct: 249 SYQNPQGAQNENDPNNTTIFVGNLDANVTDEH 280
Score = 52.0 bits (123), Expect(2) = 2e-16
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQ 90
RAMTEMNG CS+RPMRIGPAANK T G Q
Sbjct: 214 RAMTEMNGVHCSSRPMRIGPAANKNTSGGQ 243
>ref|XP_006468021.1| PREDICTED: polyadenylate-binding protein RBP45-like isoform X1
[Citrus sinensis]
Length = 413
Score = 56.6 bits (135), Expect(2) = 2e-16
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQ 90
RAMTEMNG FCSTRPMRIGPA NKKTV Q
Sbjct: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
Score = 54.3 bits (129), Expect(2) = 2e-16
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
ASYQ +Q Q++DDP+NTT+FVGNLDS VTDEH
Sbjct: 266 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 298
>ref|XP_006449038.1| hypothetical protein CICLE_v10015407mg [Citrus clementina]
gi|557551649|gb|ESR62278.1| hypothetical protein
CICLE_v10015407mg [Citrus clementina]
Length = 413
Score = 56.6 bits (135), Expect(2) = 2e-16
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQ 90
RAMTEMNG FCSTRPMRIGPA NKKTV Q
Sbjct: 231 RAMTEMNGVFCSTRPMRIGPATNKKTVSGQ 260
Score = 54.3 bits (129), Expect(2) = 2e-16
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
ASYQ +Q Q++DDP+NTT+FVGNLDS VTDEH
Sbjct: 266 ASYQNSQVAQSDDDPNNTTVFVGNLDSIVTDEH 298
>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 54.7 bits (130), Expect(2) = 8e-16
Identities = 25/30 (83%), Positives = 25/30 (83%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQ 90
RAM EMNG FCSTRPMRIGPAA KK VG Q
Sbjct: 240 RAMNEMNGMFCSTRPMRIGPAATKKPVGGQ 269
Score = 54.3 bits (129), Expect(2) = 8e-16
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
AS+Q TQG Q E DP+NTT+FVG LDSNVTD++
Sbjct: 274 ASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDY 306
>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 55.1 bits (131), Expect(2) = 8e-16
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGSQ 105
RAM EMNG FCSTRPMRIGPAA KK VG+ + +Q
Sbjct: 225 RAMNEMNGMFCSTRPMRIGPAATKKPVGASFQNTQ 259
Score = 53.9 bits (128), Expect(2) = 8e-16
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
AS+Q TQG Q E DP+NTT+FVG LDSNVTD++
Sbjct: 253 ASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDY 285
>gb|EOY28669.1| RNA-binding family protein [Theobroma cacao]
Length = 421
Score = 53.9 bits (128), Expect(2) = 2e-15
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQ 90
RAMTEMNG FCSTRPMR GPA NKKT+ +Q
Sbjct: 239 RAMTEMNGVFCSTRPMRTGPATNKKTITAQ 268
Score = 53.9 bits (128), Expect(2) = 2e-15
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +3
Query: 192 TQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
+QG QNE+DP+NTT+FVGNLDSNVTD+H
Sbjct: 275 SQGAQNENDPNNTTIFVGNLDSNVTDDH 302
>ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial
[Oryza sativa Japonica Group]
Length = 446
Score = 56.6 bits (135), Expect(2) = 4e-15
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGS 102
RAMTEMNG++CS+RPMRIGPA+NKK +G Q + S
Sbjct: 261 RAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQPS 294
Score = 50.1 bits (118), Expect(2) = 4e-15
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDE 272
A+YQ TQGT ++ DP+NTT+FVG LD +VTDE
Sbjct: 295 ATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDE 326
>gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 56.6 bits (135), Expect(2) = 4e-15
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGS 102
RAMTEMNG++CS+RPMRIGPA+NKK +G Q + S
Sbjct: 217 RAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQPS 250
Score = 50.1 bits (118), Expect(2) = 4e-15
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDE 272
A+YQ TQGT ++ DP+NTT+FVG LD +VTDE
Sbjct: 251 ATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDE 282
>gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 56.6 bits (135), Expect(2) = 4e-15
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGS 102
RAMTEMNG++CS+RPMRIGPA+NKK +G Q + S
Sbjct: 217 RAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQPS 250
Score = 50.1 bits (118), Expect(2) = 4e-15
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDE 272
A+YQ TQGT ++ DP+NTT+FVG LD +VTDE
Sbjct: 251 ATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDE 282
>gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 402
Score = 56.6 bits (135), Expect(2) = 4e-15
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGS 102
RAMTEMNG++CS+RPMRIGPA+NKK +G Q + S
Sbjct: 217 RAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQPS 250
Score = 50.1 bits (118), Expect(2) = 4e-15
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDE 272
A+YQ TQGT ++ DP+NTT+FVG LD +VTDE
Sbjct: 251 ATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDE 282
>gb|EXB50295.1| Polyadenylate-binding protein RBP45 [Morus notabilis]
Length = 543
Score = 56.2 bits (134), Expect(2) = 7e-15
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQ 90
RAM EMNG++CSTRPMR+GPAANKK VG Q
Sbjct: 223 RAMNEMNGQYCSTRPMRVGPAANKKPVGGQ 252
Score = 49.7 bits (117), Expect(2) = 7e-15
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDE 272
A+Y TQG Q E+DP+NTT+FVG LDSN+ D+
Sbjct: 257 ATYTNTQGNQGENDPNNTTIFVGGLDSNINDD 288
>ref|XP_004295261.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Fragaria
vesca subsp. vesca]
Length = 398
Score = 58.2 bits (139), Expect(2) = 1e-14
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
ASYQG+ G +NE DP+NTT+FVGNLD+NVTD+H
Sbjct: 241 ASYQGSPGAKNETDPNNTTIFVGNLDANVTDDH 273
Score = 47.0 bits (110), Expect(2) = 1e-14
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQ 90
RAMTEMNG CS+R MRIGPAANK G+Q
Sbjct: 207 RAMTEMNGVVCSSRAMRIGPAANKNAGGNQ 236
>emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 61.6 bits (148), Expect(2) = 2e-14
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
ASYQ QGT N+ DPSNTT+FVGNLDSNVTDEH
Sbjct: 170 ASYQNNQGTPNDSDPSNTTIFVGNLDSNVTDEH 202
Score = 42.7 bits (99), Expect(2) = 2e-14
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVG 84
RAM+EMNG C R MRIG AANKK+VG
Sbjct: 140 RAMSEMNGMMCLGRAMRIGAAANKKSVG 167
>sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45
[Nicotiana plumbaginifolia]
Length = 409
Score = 56.2 bits (134), Expect(2) = 2e-14
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +1
Query: 1 RAMTEMNGRFCSTRPMRIGPAANKKTVGSQTKGSQE 108
RAMTEMNG CSTRPMRIGPAANKK VG+ K + +
Sbjct: 233 RAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQ 268
Score = 47.8 bits (112), Expect(2) = 2e-14
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +3
Query: 177 ASYQGTQGTQNEDDPSNTTLFVGNLDSNVTDEH 275
A+YQ Q TQ E DP+NTT+FVG LD V +EH
Sbjct: 265 ATYQNPQATQGESDPNNTTIFVGGLDPTVAEEH 297