BLASTX nr result

ID: Rauwolfia21_contig00000515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00000515
         (288 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231052.1| PREDICTED: probable ubiquitin-conjugating en...    78   1e-12
ref|XP_002521277.1| conserved hypothetical protein [Ricinus comm...    55   9e-06

>ref|XP_004231052.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like
           [Solanum lycopersicum]
          Length = 1155

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 13/82 (15%)
 Frame = +1

Query: 37  MESGQHNDAS-------------NNIGSPMTANGHNSESNSTSEGKPGDILKNLQNVSYI 177
           ME+GQH+DAS             N+I     ANG + +    SE KPG+IL+NL+NVSYI
Sbjct: 1   MEAGQHHDASCNAKPTANANDNSNSIEGNSFANGASLDPKVRSECKPGEILRNLENVSYI 60

Query: 178 YRQDIVTNKINGKIGIVTEVAG 243
           YRQD+V  K +GKIG+VTEVAG
Sbjct: 61  YRQDVVKCKTDGKIGLVTEVAG 82


>ref|XP_002521277.1| conserved hypothetical protein [Ricinus communis]
           gi|223539545|gb|EEF41133.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1137

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/47 (57%), Positives = 34/47 (72%)
 Frame = +1

Query: 103 NSESNSTSEGKPGDILKNLQNVSYIYRQDIVTNKINGKIGIVTEVAG 243
           N +S S    KP +++ NL+NV YIYRQDIV +K +G IGIV EVAG
Sbjct: 40  NPDSESNVISKPDELVLNLRNVPYIYRQDIVRHKKSGAIGIVNEVAG 86


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