BLASTX nr result

ID: Perilla23_contig00030236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00030236
         (328 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092538.1| PREDICTED: RNA pseudouridine synthase 4, mit...    62   2e-07
ref|XP_012450617.1| PREDICTED: RNA pseudouridine synthase 4, mit...    57   7e-06

>ref|XP_011092538.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Sesamum
           indicum]
          Length = 454

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 31/47 (65%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = -1

Query: 328 QEMILPDISMVLQN-GSITDLDSARIGSIRLNAPLPAHMQRSWDVLN 191
           +EMILP+IS+ LQ+   I+DLD+A   SI+L APLPAHMQRSWD+LN
Sbjct: 408 KEMILPNISLALQHRNGISDLDTAATESIKLVAPLPAHMQRSWDLLN 454


>ref|XP_012450617.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Gossypium
           raimondii] gi|763744841|gb|KJB12280.1| hypothetical
           protein B456_002G009500 [Gossypium raimondii]
          Length = 479

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/48 (54%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
 Frame = -1

Query: 328 QEMILPDISMVLQNG-SITDLDSARIGSIRLNAPLPAHMQRSWDVLNS 188
           +EMILP++S VL+N  S TD D +++ S+++ APLP++MQ+SWD+LNS
Sbjct: 432 REMILPNVSQVLRNPKSFTDDDLSKLKSLKIVAPLPSYMQKSWDILNS 479


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