BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00029728
         (792 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV su...   352   2e-94
ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV su...   313   7e-83
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythra...   313   7e-83
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   305   2e-80
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...   281   5e-73
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su...   277   7e-72
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su...   277   7e-72
emb|CDP09818.1| unnamed protein product [Coffea canephora]            277   7e-72
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su...   275   3e-71
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su...   275   3e-71
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   272   2e-70
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   272   2e-70
ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su...   270   7e-70
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su...   270   7e-70
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   270   7e-70
ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV su...   262   2e-67
ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV su...   262   2e-67
ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV su...   262   2e-67
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su...   259   2e-66
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su...   259   2e-66

>ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Sesamum indicum]
          Length = 1408

 Score =  352 bits (902), Expect = 2e-94
 Identities = 177/263 (67%), Positives = 212/263 (80%)
 Frame = -1

Query: 792  EVLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFL 613
            EVLCEWLSRRG               S KN+LD+I  G+ +AE +S+ SLLMV CNQDFL
Sbjct: 573  EVLCEWLSRRGLSVSLSDLYLSPDSQSRKNILDEIYYGLLQAEKLSDISLLMVDCNQDFL 632

Query: 612  IDCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAM 433
            ++ +E  + M+NFLKE + IAQQT  ELFQASISA+KSVF DMQNLVYKYS  NN+FIAM
Sbjct: 633  VESSEEHENMKNFLKEHMSIAQQTKAELFQASISASKSVFWDMQNLVYKYSDKNNSFIAM 692

Query: 432  MKAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELIS 253
            +KAGSKGNLQKL QHSMCLGLQHSL+PLSFSVPR+LSCASWN+QK+   V KLH+ E  +
Sbjct: 693  LKAGSKGNLQKLVQHSMCLGLQHSLAPLSFSVPRYLSCASWNNQKNNFTVHKLHNQE-TT 751

Query: 252  NSYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYD 73
            +SYIP +++ANS+ AGLNPLE FVLSLTTRDSSF+G+AD+ GTL ++LM F+RDL+IGYD
Sbjct: 752  DSYIPCSIVANSYLAGLNPLESFVLSLTTRDSSFSGHADVSGTLTRRLMFFMRDLIIGYD 811

Query: 72   GTVRSCYGNQVIQFRYCSEGIDA 4
            GTVRSCYGNQV+QF YC+E   A
Sbjct: 812  GTVRSCYGNQVVQFDYCTEDTSA 834


>ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe
            guttatus] gi|848869730|ref|XP_012835485.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Erythranthe
            guttatus] gi|848869733|ref|XP_012835486.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Erythranthe
            guttatus]
          Length = 1447

 Score =  313 bits (803), Expect = 7e-83
 Identities = 154/264 (58%), Positives = 198/264 (75%)
 Frame = -1

Query: 792  EVLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFL 613
            EVLCEW++RRG               S KNLLD+I  G+QEA+ +S+ S LMV  NQDFL
Sbjct: 611  EVLCEWIARRGLSVSLADLYLSSDQHSRKNLLDEIFYGLQEAKMLSDISSLMVDWNQDFL 670

Query: 612  IDCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAM 433
            ++C E    MEN L E++LI QQT  E+FQAS+S +KSV RD+QNL YKY   NN+FIAM
Sbjct: 671  VECPEEVG-MENLLTEQMLIGQQTKAEIFQASVSVSKSVVRDIQNLAYKYPSKNNSFIAM 729

Query: 432  MKAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELIS 253
            +KAGSKGNL KLFQ S+CLGLQH+L+P+SFS+PR L+CASWN+QK    V   +    +S
Sbjct: 730  LKAGSKGNLAKLFQQSLCLGLQHTLAPVSFSIPRDLTCASWNYQKGNSGVHNFNGYPEVS 789

Query: 252  NSYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYD 73
             SYIP  ++++SF AGLNPLE FVLSLT RDSSF+G+AD+ GT+ +++M F+RD++IGYD
Sbjct: 790  ESYIPCALVSSSFLAGLNPLENFVLSLTARDSSFSGHADVSGTITRRIMYFMRDIIIGYD 849

Query: 72   GTVRSCYGNQVIQFRYCSEGIDAA 1
            GTVRS YGNQV+QF YC++ + AA
Sbjct: 850  GTVRSSYGNQVVQFNYCTKEMSAA 873


>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythranthe guttata]
          Length = 1379

 Score =  313 bits (803), Expect = 7e-83
 Identities = 154/264 (58%), Positives = 198/264 (75%)
 Frame = -1

Query: 792  EVLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFL 613
            EVLCEW++RRG               S KNLLD+I  G+QEA+ +S+ S LMV  NQDFL
Sbjct: 543  EVLCEWIARRGLSVSLADLYLSSDQHSRKNLLDEIFYGLQEAKMLSDISSLMVDWNQDFL 602

Query: 612  IDCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAM 433
            ++C E    MEN L E++LI QQT  E+FQAS+S +KSV RD+QNL YKY   NN+FIAM
Sbjct: 603  VECPEEVG-MENLLTEQMLIGQQTKAEIFQASVSVSKSVVRDIQNLAYKYPSKNNSFIAM 661

Query: 432  MKAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELIS 253
            +KAGSKGNL KLFQ S+CLGLQH+L+P+SFS+PR L+CASWN+QK    V   +    +S
Sbjct: 662  LKAGSKGNLAKLFQQSLCLGLQHTLAPVSFSIPRDLTCASWNYQKGNSGVHNFNGYPEVS 721

Query: 252  NSYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYD 73
             SYIP  ++++SF AGLNPLE FVLSLT RDSSF+G+AD+ GT+ +++M F+RD++IGYD
Sbjct: 722  ESYIPCALVSSSFLAGLNPLENFVLSLTARDSSFSGHADVSGTITRRIMYFMRDIIIGYD 781

Query: 72   GTVRSCYGNQVIQFRYCSEGIDAA 1
            GTVRS YGNQV+QF YC++ + AA
Sbjct: 782  GTVRSSYGNQVVQFNYCTKEMSAA 805


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  305 bits (782), Expect = 2e-80
 Identities = 153/256 (59%), Positives = 196/256 (76%)
 Frame = -1

Query: 792  EVLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFL 613
            EVLCEWLSRRG               S KNLLDDI CG++EAE +S+ SLLMVG NQ FL
Sbjct: 287  EVLCEWLSRRGLSVSLSDLCLSSDPQSRKNLLDDIACGLEEAEKMSDISLLMVGHNQRFL 346

Query: 612  IDCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAM 433
            I+ +E  + M    KE + +AQQT  EL QAS+ A+KSVFRDMQNL+Y Y+G  N+ +AM
Sbjct: 347  IENSEEDEDMLKS-KEHLYVAQQTSAELCQASLFASKSVFRDMQNLIYHYAGDTNSLLAM 405

Query: 432  MKAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELIS 253
            +KAGSKGNLQKLFQHSMCLGLQHSL+P+SFS+P +LSCASWN+QK+  ++ +L  +  I 
Sbjct: 406  LKAGSKGNLQKLFQHSMCLGLQHSLTPVSFSMPHYLSCASWNNQKNHLSLYRLDGTREIL 465

Query: 252  NSYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYD 73
            +SYIP T++++S+  GLNPLE F+ SLTTRDSSF+G AD+ GTL +KLM F+RD++ GYD
Sbjct: 466  DSYIPCTVVSSSYLMGLNPLESFLHSLTTRDSSFSGQADVSGTLTRKLMFFMRDIITGYD 525

Query: 72   GTVRSCYGNQVIQFRY 25
            GTVR+ YG+Q++QF Y
Sbjct: 526  GTVRNSYGSQIVQFDY 541


>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score =  281 bits (718), Expect = 5e-73
 Identities = 140/262 (53%), Positives = 190/262 (72%)
 Frame = -1

Query: 792  EVLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFL 613
            EVLCEWLSR+G               S KNLL+++  G+QEA  +S  S LMV  ++DFL
Sbjct: 573  EVLCEWLSRQGLSVSLSDLYISSDRHSRKNLLEEVYYGLQEAGRLSEVSSLMVDQHRDFL 632

Query: 612  IDCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAM 433
            +   E    ME+ +KE   I+     ELFQAS+SA++SVFRD+QNLVY+Y+ + N+FI+M
Sbjct: 633  V---EHMGNMEDSIKEHTAISSHARAELFQASVSASRSVFRDLQNLVYRYASNENSFISM 689

Query: 432  MKAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELIS 253
            +K+GSKGNLQK  QHSMC+GLQHSL+PLSFSV   L+CASWN +K   ++ K     ++S
Sbjct: 690  LKSGSKGNLQKFVQHSMCVGLQHSLAPLSFSVADQLTCASWNKEKCYSDIPK----SVVS 745

Query: 252  NSYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYD 73
            +SYI  +++ NSF  GLNP++CF  SLT+RDSSF+G+AD+ GT+ ++LM F+RDL+IGYD
Sbjct: 746  DSYIVCSIVKNSFLEGLNPIQCFTHSLTSRDSSFSGHADVSGTICRRLMYFMRDLIIGYD 805

Query: 72   GTVRSCYGNQVIQFRYCSEGID 7
            GTVR+CYGNQV+QF Y S  ++
Sbjct: 806  GTVRNCYGNQVVQFNYFSGDVN 827


>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Nicotiana sylvestris]
          Length = 1254

 Score =  277 bits (708), Expect = 7e-72
 Identities = 142/255 (55%), Positives = 173/255 (67%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               S +N++D++ CG+QEAE +S   LLM   N DFL 
Sbjct: 399  VLCEWLSMRGLSVSLSDLYISSDPYSRENMIDEVFCGLQEAERLSYVQLLMTRYNHDFLA 458

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E S     F  E + I  Q    L QAS++A K VFRD+QNLVY Y+   N+F+AM+
Sbjct: 459  GSLEVSQKAMGFDLEFMSIMLQKSASLSQASVTAFKQVFRDIQNLVYNYASKENSFLAML 518

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QHSMCLGLQ SL PLSF +PR LSC +WN+ K+    +K H+      
Sbjct: 519  KAGSKGNLLKLVQHSMCLGLQQSLVPLSFRMPRQLSCDAWNNHKAHLPFEKAHNVPERPG 578

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            SYIP  ++ NSF AGLNPLECFV SLTTRDSSF+G+AD+ GTLN+KLM F+RDL IGYDG
Sbjct: 579  SYIPCAVVENSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYIGYDG 638

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 639  TVRNAYGNQIVQFSY 653


>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Nicotiana sylvestris]
            gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X1 [Nicotiana
            sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Nicotiana sylvestris]
          Length = 1447

 Score =  277 bits (708), Expect = 7e-72
 Identities = 142/255 (55%), Positives = 173/255 (67%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               S +N++D++ CG+QEAE +S   LLM   N DFL 
Sbjct: 592  VLCEWLSMRGLSVSLSDLYISSDPYSRENMIDEVFCGLQEAERLSYVQLLMTRYNHDFLA 651

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E S     F  E + I  Q    L QAS++A K VFRD+QNLVY Y+   N+F+AM+
Sbjct: 652  GSLEVSQKAMGFDLEFMSIMLQKSASLSQASVTAFKQVFRDIQNLVYNYASKENSFLAML 711

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QHSMCLGLQ SL PLSF +PR LSC +WN+ K+    +K H+      
Sbjct: 712  KAGSKGNLLKLVQHSMCLGLQQSLVPLSFRMPRQLSCDAWNNHKAHLPFEKAHNVPERPG 771

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            SYIP  ++ NSF AGLNPLECFV SLTTRDSSF+G+AD+ GTLN+KLM F+RDL IGYDG
Sbjct: 772  SYIPCAVVENSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYIGYDG 831

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 832  TVRNAYGNQIVQFSY 846


>emb|CDP09818.1| unnamed protein product [Coffea canephora]
          Length = 1511

 Score =  277 bits (708), Expect = 7e-72
 Identities = 142/259 (54%), Positives = 185/259 (71%), Gaps = 1/259 (0%)
 Frame = -1

Query: 792  EVLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFL 613
            EVLCEWL+ RG               S +N+++++ CG+QEAE +S+  LLM+G NQDFL
Sbjct: 648  EVLCEWLAMRGLSVSLSDLYLTSDAYSRQNMIEEVSCGLQEAELLSSIRLLMMGSNQDFL 707

Query: 612  IDCTEGSDYMENFLKERIL-IAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIA 436
            ++ TE +    +F ++ +  I QQ    L +AS+SA K VF D+Q+LVY Y   +N+F++
Sbjct: 708  VESTEANKRSVDFGEQHLSSIQQQNSSVLSEASVSAFKQVFLDVQHLVYHYVSKDNSFLS 767

Query: 435  MMKAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELI 256
            M+ AGSKGNL KL QHSMCLGLQHS+ PLSFS+P  LSCA+WN+ K   +V + H +   
Sbjct: 768  MLMAGSKGNLLKLVQHSMCLGLQHSVVPLSFSIPHQLSCATWNYHKI--SVHESHGTLDH 825

Query: 255  SNSYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGY 76
            S SYIPF +I NSF  GLNP+ECFV SLTTRDSSF+G+AD+ GTL +KLM F+RDL IGY
Sbjct: 826  SGSYIPFAVIENSFLTGLNPMECFVHSLTTRDSSFSGHADVSGTLTRKLMFFMRDLSIGY 885

Query: 75   DGTVRSCYGNQVIQFRYCS 19
            DGTVR+ YGNQ+IQF Y S
Sbjct: 886  DGTVRNSYGNQLIQFSYNS 904


>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1211

 Score =  275 bits (703), Expect = 3e-71
 Identities = 142/257 (55%), Positives = 173/257 (67%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               S +N++D++ CG+QEAE +S   LLM   N DFL 
Sbjct: 356  VLCEWLSMRGLSVSLSDLYISSDPYSRENMIDEVFCGLQEAERLSYIQLLMSRYNHDFLA 415

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E S     F  E + I QQ    L QAS+S+ K VFRD+QNLVY Y+   N+F+AM+
Sbjct: 416  GSLEVSQKAMGFNLEFMSIMQQKSASLSQASVSSFKHVFRDIQNLVYNYASKENSFLAML 475

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QHSMCLGLQ SL PLSF +PR LSC +WN+ K+    +K H+      
Sbjct: 476  KAGSKGNLLKLVQHSMCLGLQQSLVPLSFRMPRRLSCDAWNNHKAHLPFEKAHNVPERPG 535

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
             YIP  ++ NSF AGLNPLECFV SLTTRDSSF+G+AD+ GTLN+KLM F+RDL  GYDG
Sbjct: 536  PYIPCAVVENSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYSGYDG 595

Query: 69   TVRSCYGNQVIQFRYCS 19
            TVR+ YGNQ++QF Y S
Sbjct: 596  TVRNAYGNQIVQFSYYS 612


>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1447

 Score =  275 bits (703), Expect = 3e-71
 Identities = 142/257 (55%), Positives = 173/257 (67%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               S +N++D++ CG+QEAE +S   LLM   N DFL 
Sbjct: 592  VLCEWLSMRGLSVSLSDLYISSDPYSRENMIDEVFCGLQEAERLSYIQLLMSRYNHDFLA 651

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E S     F  E + I QQ    L QAS+S+ K VFRD+QNLVY Y+   N+F+AM+
Sbjct: 652  GSLEVSQKAMGFNLEFMSIMQQKSASLSQASVSSFKHVFRDIQNLVYNYASKENSFLAML 711

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QHSMCLGLQ SL PLSF +PR LSC +WN+ K+    +K H+      
Sbjct: 712  KAGSKGNLLKLVQHSMCLGLQQSLVPLSFRMPRRLSCDAWNNHKAHLPFEKAHNVPERPG 771

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
             YIP  ++ NSF AGLNPLECFV SLTTRDSSF+G+AD+ GTLN+KLM F+RDL  GYDG
Sbjct: 772  PYIPCAVVENSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYSGYDG 831

Query: 69   TVRSCYGNQVIQFRYCS 19
            TVR+ YGNQ++QF Y S
Sbjct: 832  TVRNAYGNQIVQFSYYS 848


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  272 bits (696), Expect = 2e-70
 Identities = 140/255 (54%), Positives = 175/255 (68%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               S +N++D++  G+QEAE +S   LLM+  N+DFL 
Sbjct: 383  VLCEWLSMRGLSVSLSDLYISSDSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLS 442

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E S     F  E + I QQ    L QAS SA K VFRD+QNLVY Y+ ++N+ +AM+
Sbjct: 443  GSLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAML 502

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QHSMCLGLQ SL P+SF +PR LSC +WN+ KS   ++K H       
Sbjct: 503  KAGSKGNLLKLVQHSMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPG 562

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            SYIP  ++ +SF AGLNPLECFV SLTTRDSSF+G+AD+ GTLN+KLM F+RDL +GYDG
Sbjct: 563  SYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDG 622

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 623  TVRNAYGNQIVQFSY 637


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  272 bits (696), Expect = 2e-70
 Identities = 140/255 (54%), Positives = 175/255 (68%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               S +N++D++  G+QEAE +S   LLM+  N+DFL 
Sbjct: 596  VLCEWLSMRGLSVSLSDLYISSDSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLS 655

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E S     F  E + I QQ    L QAS SA K VFRD+QNLVY Y+ ++N+ +AM+
Sbjct: 656  GSLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAML 715

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QHSMCLGLQ SL P+SF +PR LSC +WN+ KS   ++K H       
Sbjct: 716  KAGSKGNLLKLVQHSMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPG 775

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            SYIP  ++ +SF AGLNPLECFV SLTTRDSSF+G+AD+ GTLN+KLM F+RDL +GYDG
Sbjct: 776  SYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDG 835

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 836  TVRNAYGNQIVQFSY 850


>ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Solanum lycopersicum]
          Length = 1307

 Score =  270 bits (691), Expect = 7e-70
 Identities = 139/255 (54%), Positives = 175/255 (68%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               S +N++D++  G+QEAE +S   LLM+  N+DFL 
Sbjct: 457  VLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLS 516

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E S     F  E + I QQ    L QAS SA K VFRD+QNLVY Y+ ++N+ +AM+
Sbjct: 517  GNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAML 576

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QH+MCLGLQ SL P+SF +PR LSC +WN+ KS   ++K H       
Sbjct: 577  KAGSKGNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPG 636

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            SYIP  ++ +SF AGLNPLECFV SLTTRDSSF+G+AD+ GTLN+KLM F+RDL +GYDG
Sbjct: 637  SYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDG 696

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 697  TVRNAYGNQIVQFSY 711


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Solanum lycopersicum] gi|723724576|ref|XP_010325435.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Solanum lycopersicum]
          Length = 1446

 Score =  270 bits (691), Expect = 7e-70
 Identities = 139/255 (54%), Positives = 175/255 (68%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               S +N++D++  G+QEAE +S   LLM+  N+DFL 
Sbjct: 596  VLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLS 655

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E S     F  E + I QQ    L QAS SA K VFRD+QNLVY Y+ ++N+ +AM+
Sbjct: 656  GNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAML 715

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QH+MCLGLQ SL P+SF +PR LSC +WN+ KS   ++K H       
Sbjct: 716  KAGSKGNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPG 775

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            SYIP  ++ +SF AGLNPLECFV SLTTRDSSF+G+AD+ GTLN+KLM F+RDL +GYDG
Sbjct: 776  SYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDG 835

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 836  TVRNAYGNQIVQFSY 850


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  270 bits (691), Expect = 7e-70
 Identities = 139/255 (54%), Positives = 175/255 (68%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               S +N++D++  G+QEAE +S   LLM+  N+DFL 
Sbjct: 288  VLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLS 347

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E S     F  E + I QQ    L QAS SA K VFRD+QNLVY Y+ ++N+ +AM+
Sbjct: 348  GNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAML 407

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QH+MCLGLQ SL P+SF +PR LSC +WN+ KS   ++K H       
Sbjct: 408  KAGSKGNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPG 467

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            SYIP  ++ +SF AGLNPLECFV SLTTRDSSF+G+AD+ GTLN+KLM F+RDL +GYDG
Sbjct: 468  SYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDG 527

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 528  TVRNAYGNQIVQFSY 542


>ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
            [Cucumis sativus]
          Length = 1361

 Score =  262 bits (670), Expect = 2e-67
 Identities = 132/255 (51%), Positives = 171/255 (67%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               SH+N++DDI CG+QEAE   N   LMV  +++ LI
Sbjct: 513  VLCEWLSTRGLSVSLSDLYLSVDSYSHENMMDDIFCGLQEAEETCNLKQLMVDSHKEILI 572

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E + ++ +   ER++  +Q    L QAS+ A K VFRD+QNLVYKYSG +N+ + M 
Sbjct: 573  GNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMF 632

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QHSMCLGLQHSL  LSFS+P  LSCA+WN QK    +QK    +  + 
Sbjct: 633  KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCAAWNSQKMPRYIQKDGLPDR-TQ 691

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            S+IP+ ++ NSF +GLNP ECF  S+T RDSSF+ NA++PGTL +KL   +RD+   YDG
Sbjct: 692  SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG 751

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 752  TVRNAYGNQLVQFCY 766


>ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Cucumis sativus]
          Length = 1362

 Score =  262 bits (670), Expect = 2e-67
 Identities = 132/255 (51%), Positives = 171/255 (67%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               SH+N++DDI CG+QEAE   N   LMV  +++ LI
Sbjct: 514  VLCEWLSTRGLSVSLSDLYLSVDSYSHENMMDDIFCGLQEAEETCNLKQLMVDSHKEILI 573

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E + ++ +   ER++  +Q    L QAS+ A K VFRD+QNLVYKYSG +N+ + M 
Sbjct: 574  GNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMF 633

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QHSMCLGLQHSL  LSFS+P  LSCA+WN QK    +QK    +  + 
Sbjct: 634  KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCAAWNSQKMPRYIQKDGLPDR-TQ 692

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            S+IP+ ++ NSF +GLNP ECF  S+T RDSSF+ NA++PGTL +KL   +RD+   YDG
Sbjct: 693  SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG 752

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 753  TVRNAYGNQLVQFCY 767


>ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Cucumis sativus] gi|778675671|ref|XP_011650448.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Cucumis sativus]
            gi|778675673|ref|XP_011650449.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus]
            gi|700200830|gb|KGN55963.1| hypothetical protein
            Csa_3G039340 [Cucumis sativus]
          Length = 1483

 Score =  262 bits (670), Expect = 2e-67
 Identities = 132/255 (51%), Positives = 171/255 (67%)
 Frame = -1

Query: 789  VLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFLI 610
            VLCEWLS RG               SH+N++DDI CG+QEAE   N   LMV  +++ LI
Sbjct: 635  VLCEWLSTRGLSVSLSDLYLSVDSYSHENMMDDIFCGLQEAEETCNLKQLMVDSHKEILI 694

Query: 609  DCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAMM 430
               E + ++ +   ER++  +Q    L QAS+ A K VFRD+QNLVYKYSG +N+ + M 
Sbjct: 695  GNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMF 754

Query: 429  KAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELISN 250
            KAGSKGNL KL QHSMCLGLQHSL  LSFS+P  LSCA+WN QK    +QK    +  + 
Sbjct: 755  KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCAAWNSQKMPRYIQKDGLPDR-TQ 813

Query: 249  SYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYDG 70
            S+IP+ ++ NSF +GLNP ECF  S+T RDSSF+ NA++PGTL +KL   +RD+   YDG
Sbjct: 814  SFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDG 873

Query: 69   TVRSCYGNQVIQFRY 25
            TVR+ YGNQ++QF Y
Sbjct: 874  TVRNAYGNQLVQFCY 888


>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Gossypium raimondii]
          Length = 1300

 Score =  259 bits (661), Expect = 2e-66
 Identities = 133/256 (51%), Positives = 170/256 (66%)
 Frame = -1

Query: 792  EVLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFL 613
            EVLCEWLS RG               S KN++D+I  G+QEAE   N   LMV   QDFL
Sbjct: 623  EVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFL 682

Query: 612  IDCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAM 433
                E ++       E++   +Q    L QAS+ + K VFRD+QNL+YKY+  +N+   M
Sbjct: 683  AGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTM 742

Query: 432  MKAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELIS 253
             KAGSKGNL KL QHSMCLGLQHSL PLSF  P  LSCA+WN+QKS    QK+  ++  +
Sbjct: 743  FKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESA 802

Query: 252  NSYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYD 73
              YIP+ ++ +SF  GLNPLECFV S+TTRD+SF+ NAD+PGTL+++LM F+RDL   YD
Sbjct: 803  KKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYD 862

Query: 72   GTVRSCYGNQVIQFRY 25
            GTVR+ YG+QV+QF Y
Sbjct: 863  GTVRNAYGDQVVQFCY 878


>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Gossypium raimondii]
          Length = 1340

 Score =  259 bits (661), Expect = 2e-66
 Identities = 133/256 (51%), Positives = 170/256 (66%)
 Frame = -1

Query: 792  EVLCEWLSRRGFXXXXXXXXXXXXXXSHKNLLDDILCGMQEAENISNASLLMVGCNQDFL 613
            EVLCEWLS RG               S KN++D+I  G+QEAE   N   LMV   QDFL
Sbjct: 482  EVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFL 541

Query: 612  IDCTEGSDYMENFLKERILIAQQTIPELFQASISAAKSVFRDMQNLVYKYSGSNNTFIAM 433
                E ++       E++   +Q    L QAS+ + K VFRD+QNL+YKY+  +N+   M
Sbjct: 542  AGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTM 601

Query: 432  MKAGSKGNLQKLFQHSMCLGLQHSLSPLSFSVPRHLSCASWNHQKSLPNVQKLHSSELIS 253
             KAGSKGNL KL QHSMCLGLQHSL PLSF  P  LSCA+WN+QKS    QK+  ++  +
Sbjct: 602  FKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESA 661

Query: 252  NSYIPFTMIANSFQAGLNPLECFVLSLTTRDSSFAGNADIPGTLNKKLMAFLRDLVIGYD 73
              YIP+ ++ +SF  GLNPLECFV S+TTRD+SF+ NAD+PGTL+++LM F+RDL   YD
Sbjct: 662  KKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYD 721

Query: 72   GTVRSCYGNQVIQFRY 25
            GTVR+ YG+QV+QF Y
Sbjct: 722  GTVRNAYGDQVVQFCY 737