BLASTX nr result

ID: Perilla23_contig00029644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00029644
         (338 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099233.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...    67   5e-09
ref|XP_012852914.1| PREDICTED: nuclear pore complex protein NUP5...    63   1e-07
ref|XP_012852907.1| PREDICTED: nuclear pore complex protein NUP5...    63   1e-07
ref|XP_004232066.1| PREDICTED: mediator of RNA polymerase II tra...    57   7e-06

>ref|XP_011099233.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore complex protein NUP58
           [Sesamum indicum]
          Length = 472

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = -2

Query: 112 FGISTPMFSSTPASGASTFSTPFATGSAMGSGASFGT 2
           FGISTP+FS TPASG STFSTPF TG+A GSGASFGT
Sbjct: 423 FGISTPLFSPTPASGVSTFSTPFGTGAATGSGASFGT 459


>ref|XP_012852914.1| PREDICTED: nuclear pore complex protein NUP58 isoform X2
           [Erythranthe guttatus]
          Length = 516

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -2

Query: 112 FGISTPMFSSTPASGASTFSTPFATGSAMGSGASFGT 2
           FG S P+F STPASG S FSTPFATG+A GSGASFGT
Sbjct: 468 FGSSNPLFGSTPASGVSNFSTPFATGAAAGSGASFGT 504


>ref|XP_012852907.1| PREDICTED: nuclear pore complex protein NUP58 isoform X1
           [Erythranthe guttatus] gi|604345848|gb|EYU44345.1|
           hypothetical protein MIMGU_mgv1a004636mg [Erythranthe
           guttata]
          Length = 517

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -2

Query: 112 FGISTPMFSSTPASGASTFSTPFATGSAMGSGASFGT 2
           FG S P+F STPASG S FSTPFATG+A GSGASFGT
Sbjct: 468 FGSSNPLFGSTPASGVSNFSTPFATGAAAGSGASFGT 504


>ref|XP_004232066.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15
           [Solanum lycopersicum]
          Length = 536

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -2

Query: 103 STPMFSSTPASGASTFSTPFATGSAMGSGASFGT 2
           STP+F STPASG S+F+TPFA+G A+ SGASFGT
Sbjct: 490 STPLFGSTPASGVSSFATPFASGPALASGASFGT 523


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