BLASTX nr result

ID: Perilla23_contig00027228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00027228
         (377 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform ...    67   5e-09
ref|XP_011095177.1| PREDICTED: transcription termination factor ...    56   9e-06

>ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Erythranthe
           guttatus] gi|848863079|ref|XP_012832311.1| PREDICTED:
           DNA repair protein RAD16 isoform X1 [Erythranthe
           guttatus]
          Length = 1057

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -3

Query: 123 MTEHVDPLDGVLKLNRRHTVFGGLLDYLRRFSCVISSAFG 4
           M +HVDP+D +LK +RRH +FGG+LDYLRRFS V+SSAFG
Sbjct: 1   MPDHVDPVDNILKFSRRHAIFGGILDYLRRFSYVVSSAFG 40


>ref|XP_011095177.1| PREDICTED: transcription termination factor 2 [Sesamum indicum]
          Length = 1059

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = -3

Query: 108 DPLDGVLKLNRRHTVFGGLLDYLRRFSCVISSAF 7
           D +D +LK +R H++FGG+LDYLRRFSCV+SSAF
Sbjct: 3   DHVDSILKFSRGHSIFGGILDYLRRFSCVVSSAF 36


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