BLASTX nr result
ID: Perilla23_contig00027089
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00027089
(545 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011092538.1| PREDICTED: RNA pseudouridine synthase 4, mit... 271 2e-70
ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mit... 269 5e-70
gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythra... 263 3e-68
gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlise... 225 1e-56
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit... 201 1e-49
ref|XP_009805029.1| PREDICTED: RNA pseudouridine synthase 4, mit... 201 2e-49
ref|XP_009805027.1| PREDICTED: RNA pseudouridine synthase 4, mit... 201 2e-49
ref|XP_012075891.1| PREDICTED: RNA pseudouridine synthase 4, mit... 199 9e-49
ref|XP_009629272.1| PREDICTED: RNA pseudouridine synthase 4, mit... 197 3e-48
ref|XP_004230733.2| PREDICTED: RNA pseudouridine synthase 4, mit... 197 3e-48
gb|KNA07729.1| hypothetical protein SOVF_168390 [Spinacia oleracea] 195 1e-47
ref|XP_010271260.1| PREDICTED: RNA pseudouridine synthase 4, mit... 195 1e-47
ref|XP_010271255.1| PREDICTED: RNA pseudouridine synthase 4, mit... 195 1e-47
ref|XP_010271251.1| PREDICTED: RNA pseudouridine synthase 4, mit... 195 1e-47
ref|XP_011001179.1| PREDICTED: RNA pseudouridine synthase 4, mit... 195 1e-47
ref|XP_011001172.1| PREDICTED: RNA pseudouridine synthase 4, mit... 195 1e-47
ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mit... 194 2e-47
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [... 193 5e-47
ref|XP_004305959.1| PREDICTED: RNA pseudouridine synthase 4, mit... 192 6e-47
gb|KJB12281.1| hypothetical protein B456_002G009500 [Gossypium r... 192 8e-47
>ref|XP_011092538.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Sesamum
indicum]
Length = 454
Score = 271 bits (692), Expect = 2e-70
Identities = 129/169 (76%), Positives = 147/169 (86%)
Frame = +3
Query: 15 KRNNQWLILPPFTPTADGCSIGKRLCGRPGETNTTALKWILKCCPHLPRSLVQKLFRLRQ 194
K +++WL+LPPF P DG SIGK+LCG P +++ TALKWI+KCCPHLPRSLVQKLFRLRQ
Sbjct: 44 KNDSRWLMLPPFDPAVDGSSIGKKLCGEPTDSSMTALKWIVKCCPHLPRSLVQKLFRLRQ 103
Query: 195 VRKECSSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSISNEKEQNFVQ 374
VRKECS+ ET EQRPRR+GAKDLMD+GDRI LPKSVD KS TTA +QS S+E+E V+
Sbjct: 104 VRKECSNIETKEQRPRRIGAKDLMDIGDRILLPKSVDGKSPSTTAVSQSFSDEEELKLVK 163
Query: 375 SLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
SLELYKD AIIVINKPPGMPVQGG+GIKRSLDELAAKYL+YDY E PRL
Sbjct: 164 SLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAAKYLKYDYAESPRL 212
>ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Erythranthe guttatus]
Length = 461
Score = 269 bits (688), Expect = 5e-70
Identities = 128/174 (73%), Positives = 150/174 (86%), Gaps = 1/174 (0%)
Frame = +3
Query: 3 NYEKKRN-NQWLILPPFTPTADGCSIGKRLCGRPGETNTTALKWILKCCPHLPRSLVQKL 179
N EK++N +QWL LPPF P ADGCSIGKRL G+P + TTALKWILKCCPH+PR LVQKL
Sbjct: 46 NCEKEKNYDQWLTLPPFNPNADGCSIGKRLSGQPADAKTTALKWILKCCPHIPRCLVQKL 105
Query: 180 FRLRQVRKECSSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSISNEKE 359
FRLRQ+RKE S+ E EQRP+R+GAKDLMD+GDRI+LPKSVD S TTAE+++ +EKE
Sbjct: 106 FRLRQIRKESSNMEDKEQRPKRIGAKDLMDIGDRIFLPKSVDGTSPSTTAESRNFFDEKE 165
Query: 360 QNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
FV+SLELYKD AIIVINKPPG+PVQGG+GIKRSLDELAAKYL++D+TE PRL
Sbjct: 166 MEFVRSLELYKDPAIIVINKPPGLPVQGGIGIKRSLDELAAKYLKFDFTESPRL 219
>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythranthe guttata]
Length = 457
Score = 263 bits (673), Expect = 3e-68
Identities = 129/179 (72%), Positives = 150/179 (83%), Gaps = 6/179 (3%)
Frame = +3
Query: 3 NYEKKRN-NQWLILPPFTPTADGCSIGKRLCGRPGETNTTALKWILKCCPHLPRSLVQKL 179
N EK++N +QWL LPPF P ADGCSIGKRL G+P + TTALKWILKCCPH+PR LVQKL
Sbjct: 37 NCEKEKNYDQWLTLPPFNPNADGCSIGKRLSGQPADAKTTALKWILKCCPHIPRCLVQKL 96
Query: 180 FRLRQV-----RKECSSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSI 344
FRLRQV RKE S+ E EQRP+R+GAKDLMD+GDRI+LPKSVD S TTAE+++
Sbjct: 97 FRLRQVHFLLIRKESSNMEDKEQRPKRIGAKDLMDIGDRIFLPKSVDGTSPSTTAESRNF 156
Query: 345 SNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
+EKE FV+SLELYKD AIIVINKPPG+PVQGG+GIKRSLDELAAKYL++D+TE PRL
Sbjct: 157 FDEKEMEFVRSLELYKDPAIIVINKPPGLPVQGGIGIKRSLDELAAKYLKFDFTESPRL 215
>gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlisea aurea]
Length = 165
Score = 225 bits (573), Expect = 1e-56
Identities = 113/165 (68%), Positives = 132/165 (80%), Gaps = 1/165 (0%)
Frame = +3
Query: 30 WLILPPFTPTADGCSIGKRLCGRPGETNTTALKWILKCCPHLPRSLVQKLFRLRQVRKEC 209
WL LP F+ TAD CS GKR+ GR TN T LKWIL CCP LPRSLVQKLFRLR+VRK+C
Sbjct: 1 WLTLPAFSETADACSTGKRIFGRHPVTNMTTLKWILNCCPQLPRSLVQKLFRLRRVRKKC 60
Query: 210 SSAETTEQRPRRVGAKDLMDVGDRIYLPKSVD-EKSHPTTAENQSISNEKEQNFVQSLEL 386
S T E +P+RVGA DLM+VGD I+LPKSVD E S PT++ + +E+E FV+SLEL
Sbjct: 61 SYF-TEEMQPKRVGATDLMEVGDIIFLPKSVDGEASSPTSSNKNGLFDEEESRFVRSLEL 119
Query: 387 YKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
YKDSAIIV+NKPPG+PVQGGVGIK SLDELAAKYL+YD+ + PRL
Sbjct: 120 YKDSAIIVVNKPPGLPVQGGVGIKSSLDELAAKYLKYDFQDYPRL 164
>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
[Solanum tuberosum]
Length = 467
Score = 201 bits (512), Expect = 1e-49
Identities = 103/179 (57%), Positives = 133/179 (74%), Gaps = 6/179 (3%)
Frame = +3
Query: 3 NYEKKRNNQWLILPPFTPTADGCSIGKRLCG-----RPGETNT-TALKWILKCCPHLPRS 164
N + +WL LPPFT T +G ++G+ L G + TNT TALKW+ +CCP LP+S
Sbjct: 49 NRNENEKAKWLTLPPFTATVNGAALGRELAGVKMDVKENSTNTMTALKWVQRCCPELPKS 108
Query: 165 LVQKLFRLRQVRKECSSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSI 344
LVQKLFRLRQVR++ S+ E EQRP+RV AK+ M+VGDRI+LP +V + P+
Sbjct: 109 LVQKLFRLRQVRRDSSNVE--EQRPKRVSAKESMNVGDRIFLPITVQK--FPSEKVVYYP 164
Query: 345 SNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
S+E+E+ FV SLELYKD I+V+NKPPGMPVQGG+GIKRSLDELAAKY+R++Y+E PRL
Sbjct: 165 SSEEERKFVHSLELYKDPEIVVVNKPPGMPVQGGIGIKRSLDELAAKYMRHEYSEAPRL 223
>ref|XP_009805029.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X3
[Nicotiana sylvestris]
Length = 381
Score = 201 bits (511), Expect = 2e-49
Identities = 102/176 (57%), Positives = 130/176 (73%), Gaps = 3/176 (1%)
Frame = +3
Query: 3 NYEKKRNNQWLILPPFTPTADGCSIGKRLCG--RPGETNT-TALKWILKCCPHLPRSLVQ 173
N + + +W LPPFT T +G ++GK L G TNT TALKW+ +CCP LP+SLVQ
Sbjct: 81 NGNESKKGKWFTLPPFTATVNGAALGKELAGVKMDKSTNTMTALKWVQRCCPELPQSLVQ 140
Query: 174 KLFRLRQVRKECSSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSISNE 353
KLFRLRQVR+E S E EQRP+RV AK+ M++GDRI+LP +V + P+ S+E
Sbjct: 141 KLFRLRQVRRESSDVE--EQRPKRVAAKESMNIGDRIFLPITVQK--FPSDKVEDYPSSE 196
Query: 354 KEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
+E F+ SLELYKD IIV+NKPPG+PVQGG+GIKRSLDELAAKY++Y+Y+E PRL
Sbjct: 197 EEMKFLHSLELYKDPEIIVLNKPPGLPVQGGIGIKRSLDELAAKYMKYEYSEAPRL 252
>ref|XP_009805027.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Nicotiana sylvestris]
Length = 496
Score = 201 bits (511), Expect = 2e-49
Identities = 102/176 (57%), Positives = 130/176 (73%), Gaps = 3/176 (1%)
Frame = +3
Query: 3 NYEKKRNNQWLILPPFTPTADGCSIGKRLCG--RPGETNT-TALKWILKCCPHLPRSLVQ 173
N + + +W LPPFT T +G ++GK L G TNT TALKW+ +CCP LP+SLVQ
Sbjct: 81 NGNESKKGKWFTLPPFTATVNGAALGKELAGVKMDKSTNTMTALKWVQRCCPELPQSLVQ 140
Query: 174 KLFRLRQVRKECSSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSISNE 353
KLFRLRQVR+E S E EQRP+RV AK+ M++GDRI+LP +V + P+ S+E
Sbjct: 141 KLFRLRQVRRESSDVE--EQRPKRVAAKESMNIGDRIFLPITVQK--FPSDKVEDYPSSE 196
Query: 354 KEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
+E F+ SLELYKD IIV+NKPPG+PVQGG+GIKRSLDELAAKY++Y+Y+E PRL
Sbjct: 197 EEMKFLHSLELYKDPEIIVLNKPPGLPVQGGIGIKRSLDELAAKYMKYEYSEAPRL 252
>ref|XP_012075891.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Jatropha
curcas] gi|802540331|ref|XP_012075896.1| PREDICTED: RNA
pseudouridine synthase 4, mitochondrial [Jatropha
curcas] gi|802540333|ref|XP_012075899.1| PREDICTED: RNA
pseudouridine synthase 4, mitochondrial [Jatropha
curcas] gi|802540335|ref|XP_012075905.1| PREDICTED: RNA
pseudouridine synthase 4, mitochondrial [Jatropha
curcas] gi|643740231|gb|KDP45903.1| hypothetical protein
JCGZ_15463 [Jatropha curcas]
Length = 470
Score = 199 bits (505), Expect = 9e-49
Identities = 100/176 (56%), Positives = 128/176 (72%), Gaps = 5/176 (2%)
Frame = +3
Query: 9 EKKRNNQWLILPPFTPTADGCSIGKRLCGRPGE---TNTTALKWILKCCPHLPRSLVQKL 179
+ K+ +W LPP+T T G ++GK L E TTALKW+L+CCP LPRSLVQKL
Sbjct: 52 DDKKKGKWFTLPPYTSTISGSALGKALSVSISEKLANETTALKWVLRCCPELPRSLVQKL 111
Query: 180 FRLRQVRKECSSA--ETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSISNE 353
FRLRQVR+E S+ + EQ+ +RV AKDLM +GDRI+LP +V + + Q++ N+
Sbjct: 112 FRLRQVRRESSNLRDQAEEQKVKRVAAKDLMSIGDRIFLPITVQALP---SEKQQNVYNQ 168
Query: 354 KEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
+ NF++SLELYKD IIV+NKPPG+PVQGG+GIKRSLDELAA L YDY+EPPRL
Sbjct: 169 EAVNFIRSLELYKDDIIIVVNKPPGIPVQGGIGIKRSLDELAASCLSYDYSEPPRL 224
>ref|XP_009629272.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Nicotiana tomentosiformis]
Length = 464
Score = 197 bits (501), Expect = 3e-48
Identities = 100/173 (57%), Positives = 131/173 (75%), Gaps = 3/173 (1%)
Frame = +3
Query: 12 KKRNNQWLILPPFTPTADGCSIGKRLCG-RPGE-TNT-TALKWILKCCPHLPRSLVQKLF 182
+ + +W LPPF PT +G ++GK L G + G+ TNT TALKW+ +CCP LP+SLVQKLF
Sbjct: 52 ESKKGKWFTLPPFNPTVNGAALGKELAGVKMGKSTNTLTALKWVQRCCPELPQSLVQKLF 111
Query: 183 RLRQVRKECSSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSISNEKEQ 362
RLRQVR+E S E QRP+RV AK+ M++GDRI+LP +V + P+ S+E+E
Sbjct: 112 RLRQVRRESSDVEV--QRPKRVAAKEPMNIGDRIFLPITVQK--FPSDKVTDYPSSEEEM 167
Query: 363 NFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
F+ SLELYKD IIV+NKPPG+PVQGG+GIKRSLDELAAKY++++Y+E PRL
Sbjct: 168 KFLHSLELYKDPEIIVLNKPPGLPVQGGIGIKRSLDELAAKYMKFEYSEAPRL 220
>ref|XP_004230733.2| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Solanum
lycopersicum]
Length = 478
Score = 197 bits (500), Expect = 3e-48
Identities = 102/179 (56%), Positives = 130/179 (72%), Gaps = 6/179 (3%)
Frame = +3
Query: 3 NYEKKRNNQWLILPPFTPTADGCSIGKRLCG-----RPGETNT-TALKWILKCCPHLPRS 164
N + +WL LPPFT +G ++G+ L G TNT TALKW+ +CCP LP+S
Sbjct: 60 NRNENEKAKWLTLPPFTAAVNGAALGRELAGVKMDVNENSTNTMTALKWVQRCCPELPKS 119
Query: 165 LVQKLFRLRQVRKECSSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSI 344
LVQKLFRLRQVR++ S+ E EQRP+RV AK+ M+VGDRI+LP +V + P+
Sbjct: 120 LVQKLFRLRQVRRDSSNVE--EQRPKRVSAKESMNVGDRIFLPITVQK--FPSEKVVYYP 175
Query: 345 SNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
S+E+E+ FV SLELYKD+ IIV+NKPPGMPVQGG+GIKRSLDELAAKY+ + Y+E PRL
Sbjct: 176 SSEEERKFVHSLELYKDAEIIVVNKPPGMPVQGGIGIKRSLDELAAKYMSHQYSEAPRL 234
>gb|KNA07729.1| hypothetical protein SOVF_168390 [Spinacia oleracea]
Length = 478
Score = 195 bits (496), Expect = 1e-47
Identities = 104/178 (58%), Positives = 129/178 (72%), Gaps = 13/178 (7%)
Frame = +3
Query: 27 QWLILPPFTPTADGCSIGKRLCGRPGE-------TNTTALKWILKCCPHLPRSLVQKLFR 185
+W+ LPPFT T + S+G+RL R E T T+ALKW+++CCPHLP+SLVQKLFR
Sbjct: 58 KWVTLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFR 117
Query: 186 LRQVRKEC------SSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQSIS 347
LRQVR+EC SS + E R +RVGAKD M+ G+RI+LP SV + S P + +
Sbjct: 118 LRQVRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISV-QGSSPVKKQPKYEC 176
Query: 348 NEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
+E E NF++SLELYKDSAII INKPP +PVQGG+GIK+SLDELAA LRYD EPPRL
Sbjct: 177 SEAEMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRL 234
>ref|XP_010271260.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X3 [Nelumbo nucifera]
Length = 369
Score = 195 bits (496), Expect = 1e-47
Identities = 104/188 (55%), Positives = 130/188 (69%), Gaps = 17/188 (9%)
Frame = +3
Query: 9 EKKRNNQWLILPPFTPTADGCSIGKRLCGRPGE---------TNTTALKWILKCCPHLPR 161
+K +WLILPP + + D S+ K L RP + T+TTALKW+L+CCPHLPR
Sbjct: 48 KKTEKGRWLILPPVSSSIDAVSVVKALSSRPSDLKGETTNTTTSTTALKWVLRCCPHLPR 107
Query: 162 SLVQKLFRLRQVRKE-CSSAETT-------EQRPRRVGAKDLMDVGDRIYLPKSVDEKSH 317
SLVQKLFRLRQVR+E C S + E R +RV AK++M++GDRI+LP +V E
Sbjct: 108 SLVQKLFRLRQVRRESCDSMSSLDIGNHAQEHRLKRVTAKEVMNLGDRIFLPITVQELPS 167
Query: 318 PTTAENQSISNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRY 497
T + NE E +++ SLELYKD AII +NKP GMPVQGG+GIK+SLDELAA YLRY
Sbjct: 168 ET---QEHYCNEDEISYICSLELYKDPAIIAVNKPHGMPVQGGIGIKKSLDELAATYLRY 224
Query: 498 DYTEPPRL 521
DY+EPPRL
Sbjct: 225 DYSEPPRL 232
>ref|XP_010271255.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X2 [Nelumbo nucifera]
Length = 440
Score = 195 bits (496), Expect = 1e-47
Identities = 104/188 (55%), Positives = 130/188 (69%), Gaps = 17/188 (9%)
Frame = +3
Query: 9 EKKRNNQWLILPPFTPTADGCSIGKRLCGRPGE---------TNTTALKWILKCCPHLPR 161
+K +WLILPP + + D S+ K L RP + T+TTALKW+L+CCPHLPR
Sbjct: 48 KKTEKGRWLILPPVSSSIDAVSVVKALSSRPSDLKGETTNTTTSTTALKWVLRCCPHLPR 107
Query: 162 SLVQKLFRLRQVRKE-CSSAETT-------EQRPRRVGAKDLMDVGDRIYLPKSVDEKSH 317
SLVQKLFRLRQVR+E C S + E R +RV AK++M++GDRI+LP +V E
Sbjct: 108 SLVQKLFRLRQVRRESCDSMSSLDIGNHAQEHRLKRVTAKEVMNLGDRIFLPITVQELPS 167
Query: 318 PTTAENQSISNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRY 497
T + NE E +++ SLELYKD AII +NKP GMPVQGG+GIK+SLDELAA YLRY
Sbjct: 168 ET---QEHYCNEDEISYICSLELYKDPAIIAVNKPHGMPVQGGIGIKKSLDELAATYLRY 224
Query: 498 DYTEPPRL 521
DY+EPPRL
Sbjct: 225 DYSEPPRL 232
>ref|XP_010271251.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Nelumbo nucifera]
Length = 472
Score = 195 bits (496), Expect = 1e-47
Identities = 104/188 (55%), Positives = 130/188 (69%), Gaps = 17/188 (9%)
Frame = +3
Query: 9 EKKRNNQWLILPPFTPTADGCSIGKRLCGRPGE---------TNTTALKWILKCCPHLPR 161
+K +WLILPP + + D S+ K L RP + T+TTALKW+L+CCPHLPR
Sbjct: 48 KKTEKGRWLILPPVSSSIDAVSVVKALSSRPSDLKGETTNTTTSTTALKWVLRCCPHLPR 107
Query: 162 SLVQKLFRLRQVRKE-CSSAETT-------EQRPRRVGAKDLMDVGDRIYLPKSVDEKSH 317
SLVQKLFRLRQVR+E C S + E R +RV AK++M++GDRI+LP +V E
Sbjct: 108 SLVQKLFRLRQVRRESCDSMSSLDIGNHAQEHRLKRVTAKEVMNLGDRIFLPITVQELPS 167
Query: 318 PTTAENQSISNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRY 497
T + NE E +++ SLELYKD AII +NKP GMPVQGG+GIK+SLDELAA YLRY
Sbjct: 168 ET---QEHYCNEDEISYICSLELYKDPAIIAVNKPHGMPVQGGIGIKKSLDELAATYLRY 224
Query: 498 DYTEPPRL 521
DY+EPPRL
Sbjct: 225 DYSEPPRL 232
>ref|XP_011001179.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
[Populus euphratica]
Length = 471
Score = 195 bits (495), Expect = 1e-47
Identities = 104/183 (56%), Positives = 128/183 (69%), Gaps = 10/183 (5%)
Frame = +3
Query: 3 NYEKKRNNQWLILPPFTPTADGCSIGKRLCGR---PGETNTTALKWILKCCPHLPRSLVQ 173
+YE + +W LPP+T T +G +GK L R + TTALKW+L+CCP LPR+LVQ
Sbjct: 49 HYENDKRGKWFTLPPYTSTINGSVLGKALSTRIPAKSASETTALKWVLRCCPELPRNLVQ 108
Query: 174 KLFRLRQVRKECSSAETT-------EQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAE 332
KLFRLRQVR+E S E+ E R +RV AKD MDVGDRI+LP SV K+ P +
Sbjct: 109 KLFRLRQVRRESSVMESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISV--KALPAEKQ 166
Query: 333 NQSISNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEP 512
+ S E+E NF++ LELYKD AIIV+NKPPGMPVQGG+GIKRSLDEL+A DY+EP
Sbjct: 167 DCHCS-EEETNFIRGLELYKDDAIIVVNKPPGMPVQGGIGIKRSLDELSASCFSSDYSEP 225
Query: 513 PRL 521
PRL
Sbjct: 226 PRL 228
>ref|XP_011001172.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Populus euphratica]
Length = 475
Score = 195 bits (495), Expect = 1e-47
Identities = 104/183 (56%), Positives = 128/183 (69%), Gaps = 10/183 (5%)
Frame = +3
Query: 3 NYEKKRNNQWLILPPFTPTADGCSIGKRLCGR---PGETNTTALKWILKCCPHLPRSLVQ 173
+YE + +W LPP+T T +G +GK L R + TTALKW+L+CCP LPR+LVQ
Sbjct: 49 HYENDKRGKWFTLPPYTSTINGSVLGKALSTRIPAKSASETTALKWVLRCCPELPRNLVQ 108
Query: 174 KLFRLRQVRKECSSAETT-------EQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAE 332
KLFRLRQVR+E S E+ E R +RV AKD MDVGDRI+LP SV K+ P +
Sbjct: 109 KLFRLRQVRRESSVMESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISV--KALPAEKQ 166
Query: 333 NQSISNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEP 512
+ S E+E NF++ LELYKD AIIV+NKPPGMPVQGG+GIKRSLDEL+A DY+EP
Sbjct: 167 DCHCS-EEETNFIRGLELYKDDAIIVVNKPPGMPVQGGIGIKRSLDELSASCFSSDYSEP 225
Query: 513 PRL 521
PRL
Sbjct: 226 PRL 228
>ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Vitis vinifera] gi|296090438|emb|CBI40257.3| unnamed
protein product [Vitis vinifera]
Length = 476
Score = 194 bits (494), Expect = 2e-47
Identities = 103/186 (55%), Positives = 130/186 (69%), Gaps = 16/186 (8%)
Frame = +3
Query: 12 KKRNNQWLILPPFTPTADGCSIGKRLCGRPGETNT---------TALKWILKCCPHLPRS 164
K + +W LP FTP D S+GK L G + NT TALKW+++CCP LPRS
Sbjct: 50 KSKKGKWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRS 109
Query: 165 LVQKLFRLRQVRKECSSAETT-------EQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPT 323
LVQKLFRLRQVR+E + T+ E R +RV AKDLM++GD+I LP +V+E
Sbjct: 110 LVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEFP--- 166
Query: 324 TAENQSISNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDY 503
+ +++ N++E NFV +LELYKD AIIV+NKPPG+PVQGG+GIKRSLDELAA YLRYD
Sbjct: 167 SEKHEYHCNDEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDC 226
Query: 504 TEPPRL 521
+EPPRL
Sbjct: 227 SEPPRL 232
>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
synthase, putative [Theobroma cacao]
Length = 477
Score = 193 bits (490), Expect = 5e-47
Identities = 100/183 (54%), Positives = 127/183 (69%), Gaps = 10/183 (5%)
Frame = +3
Query: 3 NYEKKRNNQWLILPPFTPTADGCSIGKRLCGRP---GETNTTALKWILKCCPHLPRSLVQ 173
N EKK+ N+W LPPFT T + +G +L G+P TTA+KW+++CCP LPRSLVQ
Sbjct: 54 NSEKKKKNKWFTLPPFTKTVNASVLGAKLSGKPHSKAANETTAVKWVMRCCPELPRSLVQ 113
Query: 174 KLFRLRQVRKECSSAETTEQ-------RPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAE 332
KLFRLRQVR+E E + +RVGAKD +++GDRI+LP SV E +
Sbjct: 114 KLFRLRQVRRESHVLEVAGDGCQVQTVQLKRVGAKDALNIGDRIFLPFSVREFREE---K 170
Query: 333 NQSISNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEP 512
+S E+E NF++ LELYKD AIIV+NKPPGMPVQGG+GIK SLD+LAA L +DY+EP
Sbjct: 171 QESGCTEEELNFIRGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLDKLAAACLCFDYSEP 230
Query: 513 PRL 521
PRL
Sbjct: 231 PRL 233
>ref|XP_004305959.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Fragaria
vesca subsp. vesca]
Length = 476
Score = 192 bits (489), Expect = 6e-47
Identities = 98/180 (54%), Positives = 125/180 (69%), Gaps = 9/180 (5%)
Frame = +3
Query: 9 EKKRNNQWLILPPFTPTADGCSIGKRLCGRPGE---------TNTTALKWILKCCPHLPR 161
++KR N+W LPPFT T +G ++G+ L G TTALKW+ +CCP +PR
Sbjct: 45 KQKRGNKWFTLPPFTDTVNGAALGRELSRSVGRDVYAKPSAAAATTALKWVTRCCPEIPR 104
Query: 162 SLVQKLFRLRQVRKECSSAETTEQRPRRVGAKDLMDVGDRIYLPKSVDEKSHPTTAENQS 341
+LVQKLFRLRQVR+E S + + Q +RVG KD M++GDRI LP SV K P + +
Sbjct: 105 NLVQKLFRLRQVRREASDMDQSVQPLKRVGTKDSMNLGDRICLPISV--KEFPDHKQKEG 162
Query: 342 ISNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYLRYDYTEPPRL 521
+E+E F++SL LYKD AIIVINKPPG+PVQGG+GIKRSLDELAA L YD ++PPRL
Sbjct: 163 HCSEEEAEFIRSLVLYKDPAIIVINKPPGLPVQGGIGIKRSLDELAATCLSYDLSQPPRL 222
>gb|KJB12281.1| hypothetical protein B456_002G009500 [Gossypium raimondii]
Length = 315
Score = 192 bits (488), Expect = 8e-47
Identities = 101/190 (53%), Positives = 133/190 (70%), Gaps = 17/190 (8%)
Frame = +3
Query: 3 NYEKKRNNQWLILPPFTPTADGCSIGKRLCGR-------PGETN---TTALKWILKCCPH 152
N EKK+ ++W LPPF T + +G +L + ET+ TTALKW+LKCCP
Sbjct: 48 NSEKKKESKWFTLPPFAKTVNASELGAKLARKNHLKSATSAETSAYETTALKWVLKCCPE 107
Query: 153 LPRSLVQKLFRLRQVRKECSSAETTEQ-------RPRRVGAKDLMDVGDRIYLPKSVDEK 311
LPR+LVQKLFRLRQVR+E + E T+ + +RVGAKD +++GD+I+LP SV E
Sbjct: 108 LPRNLVQKLFRLRQVRRESIAMEVTDDGCQVQKIQLKRVGAKDSLNIGDKIFLPISVREV 167
Query: 312 SHPTTAENQSISNEKEQNFVQSLELYKDSAIIVINKPPGMPVQGGVGIKRSLDELAAKYL 491
+++ ++E NF++SLELYKD+AIIV+NKPPGMPVQGG+GIK SLDELAA +L
Sbjct: 168 PEE---KHEHDCTDEESNFIRSLELYKDTAIIVLNKPPGMPVQGGIGIKWSLDELAAAWL 224
Query: 492 RYDYTEPPRL 521
RYDY+E PRL
Sbjct: 225 RYDYSESPRL 234