BLASTX nr result
ID: Perilla23_contig00024488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00024488
(462 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012836427.1| PREDICTED: DNA-directed RNA polymerase V sub... 162 1e-37
ref|XP_012836426.1| PREDICTED: DNA-directed RNA polymerase V sub... 162 1e-37
ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V sub... 153 4e-35
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise... 115 1e-23
ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V sub... 92 2e-16
ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V sub... 91 3e-16
ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 90 7e-16
ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 89 1e-15
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub... 81 3e-13
gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas] 81 3e-13
ref|XP_002299207.2| hypothetical protein POPTR_0001s06460g [Popu... 80 4e-13
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope... 79 2e-12
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put... 78 2e-12
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 78 2e-12
ref|XP_008375320.1| PREDICTED: DNA-directed RNA polymerase V sub... 78 3e-12
ref|XP_007219786.1| hypothetical protein PRUPE_ppa024567mg [Prun... 77 5e-12
ref|XP_011020393.1| PREDICTED: DNA-directed RNA polymerase V sub... 77 6e-12
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 77 6e-12
ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 76 8e-12
ref|XP_011469364.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 76 1e-11
>ref|XP_012836427.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Erythranthe guttatus]
Length = 2102
Score = 162 bits (409), Expect = 1e-37
Identities = 82/165 (49%), Positives = 108/165 (65%), Gaps = 12/165 (7%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDLDDYGNFELSPVRES 281
+W T+ AEL D+EID Y+FL MVNSSKLED GTSCLGA++EDL +DY + +LSPVRE
Sbjct: 1229 LWDTRKAELSPDKEIDVYDFLHMVNSSKLEDAGTSCLGADIEDLGQEDYMDLDLSPVREP 1288
Query: 280 GVDKPTFEDGIEFGL----------KEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEEST 131
G +KPTFE +EFGL KE + W S GKK D+E +DW KK E +T
Sbjct: 1289 GSEKPTFECEVEFGLNGDGFSKEGGKESEDSWSSWGKKVDTE-------DDWTKKAELTT 1341
Query: 130 SGRKTNSEENDW--STLTVAEEEKSNSAWGRKTDSDGGGWGKKDE 2
G+K + E +DW +E+++S+WG+K +SD GGWG+K E
Sbjct: 1342 WGKKVDREADDWILKGQKSKTDEENSSSWGKKVESDAGGWGRKPE 1386
Score = 60.8 bits (146), Expect = 4e-07
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 59/209 (28%)
Frame = -3
Query: 451 TKNAEL-----RADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDLDDYGNFELSPVR 287
TK AEL + D E D +++ SK ++ +S G +VE D G + P +
Sbjct: 1334 TKKAELTTWGKKVDREAD--DWILKGQKSKTDEENSSSWGKKVES----DAGGWGRKPEQ 1387
Query: 286 ESG--------VD--------KPTFEDGIEFGL------KEDDGDWLSS--------GKK 197
+G +D + TF++ + G + D G W + GKK
Sbjct: 1388 STGGSTGQTRSIDNDWTKAGQQSTFDEDAQTGSAWGKKKESDAGGWGKNVESDAGGWGKK 1447
Query: 196 ADSEVSSFMYSND-----WAKKPEESTSG---------------RKTNSEENDWSTL--- 86
+S+ + D W KKPE+S G +K SE N+W+
Sbjct: 1448 VESDAGGWGKKVDSDAGGWGKKPEQSPRGNTARSVDNVNSPAWGKKVTSEGNEWTKAGEK 1507
Query: 85 -TVAEEEKSNSAWGRKTDSDGGGWGKKDE 2
T E +++SAWG+K SDGG W KKDE
Sbjct: 1508 STSPEAAQNSSAWGKKAGSDGGDWAKKDE 1536
Score = 56.6 bits (135), Expect = 7e-06
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = -3
Query: 271 KPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTSG--RKTNSEEND 98
K DG ++ K++ W + KKA S+ DWAKK E+ST G +K S+ D
Sbjct: 1566 KKAGSDGGDWAKKDEPSTW-GNAKKAGSD------GGDWAKKDEQSTWGNVKKAGSDGGD 1618
Query: 97 WSTLTVAEEEKSNSAWG--RKTDSDGGGWGKKDE 2
W+ ++ S WG +K SDGG W KKDE
Sbjct: 1619 WA------KKDEQSTWGNVKKAGSDGGDWAKKDE 1646
Score = 56.2 bits (134), Expect = 9e-06
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = -3
Query: 280 GVDKPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTSG--RKTNSE 107
G K DG ++ K++ W + KKA S+ DWAKK E+ST G +K S+
Sbjct: 1585 GNAKKAGSDGGDWAKKDEQSTW-GNVKKAGSD------GGDWAKKDEQSTWGNVKKAGSD 1637
Query: 106 ENDWSTLTVAEEEKSNSAWG--RKTDSDGGGWGKKDE 2
DW+ ++ S WG +K SDGG W KKDE
Sbjct: 1638 GGDWA------KKDEQSTWGNVKKAGSDGGDWAKKDE 1668
>ref|XP_012836426.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Erythranthe guttatus] gi|604334092|gb|EYU38281.1|
hypothetical protein MIMGU_mgv1a000048mg [Erythranthe
guttata]
Length = 2113
Score = 162 bits (409), Expect = 1e-37
Identities = 82/165 (49%), Positives = 108/165 (65%), Gaps = 12/165 (7%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDLDDYGNFELSPVRES 281
+W T+ AEL D+EID Y+FL MVNSSKLED GTSCLGA++EDL +DY + +LSPVRE
Sbjct: 1229 LWDTRKAELSPDKEIDVYDFLHMVNSSKLEDAGTSCLGADIEDLGQEDYMDLDLSPVREP 1288
Query: 280 GVDKPTFEDGIEFGL----------KEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEEST 131
G +KPTFE +EFGL KE + W S GKK D+E +DW KK E +T
Sbjct: 1289 GSEKPTFECEVEFGLNGDGFSKEGGKESEDSWSSWGKKVDTE-------DDWTKKAELTT 1341
Query: 130 SGRKTNSEENDW--STLTVAEEEKSNSAWGRKTDSDGGGWGKKDE 2
G+K + E +DW +E+++S+WG+K +SD GGWG+K E
Sbjct: 1342 WGKKVDREADDWILKGQKSKTDEENSSSWGKKVESDAGGWGRKPE 1386
Score = 59.3 bits (142), Expect = 1e-06
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 19/143 (13%)
Frame = -3
Query: 373 EDTGTSCLGAEVEDLDLDDYGNFELSPVRESGVDKPTFEDGIEFGLKEDDGDWLSSGKKA 194
ED T + ++ D +G S G + G ++ D G W GK+
Sbjct: 1414 EDAQTGSAWGKKKESDAGGWGKNVESDAGGWGKKVESDAGGWGKKVESDAGGW---GKQV 1470
Query: 193 DSEVSSFMYSNDWAKKPEESTSG---------------RKTNSEENDWSTL----TVAEE 71
DS+ W KKPE+S G +K SE N+W+ T E
Sbjct: 1471 DSDAGG------WGKKPEQSPRGNTARSVDNVNSPAWGKKVTSEGNEWTKAGEKSTSPEA 1524
Query: 70 EKSNSAWGRKTDSDGGGWGKKDE 2
+++SAWG+K SDGG W KKDE
Sbjct: 1525 AQNSSAWGKKAGSDGGDWAKKDE 1547
Score = 56.6 bits (135), Expect = 7e-06
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = -3
Query: 271 KPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTSG--RKTNSEEND 98
K DG ++ K++ W + KKA S+ DWAKK E+ST G +K S+ D
Sbjct: 1577 KKAGSDGGDWAKKDEPSTW-GNAKKAGSD------GGDWAKKDEQSTWGNVKKAGSDGGD 1629
Query: 97 WSTLTVAEEEKSNSAWG--RKTDSDGGGWGKKDE 2
W+ ++ S WG +K SDGG W KKDE
Sbjct: 1630 WA------KKDEQSTWGNVKKAGSDGGDWAKKDE 1657
Score = 56.2 bits (134), Expect = 9e-06
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = -3
Query: 280 GVDKPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTSG--RKTNSE 107
G K DG ++ K++ W + KKA S+ DWAKK E+ST G +K S+
Sbjct: 1596 GNAKKAGSDGGDWAKKDEQSTW-GNVKKAGSD------GGDWAKKDEQSTWGNVKKAGSD 1648
Query: 106 ENDWSTLTVAEEEKSNSAWG--RKTDSDGGGWGKKDE 2
DW+ ++ S WG +K SDGG W KKDE
Sbjct: 1649 GGDWA------KKDEQSTWGNVKKAGSDGGDWAKKDE 1679
>ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
Length = 2096
Score = 153 bits (387), Expect = 4e-35
Identities = 87/187 (46%), Positives = 109/187 (58%), Gaps = 34/187 (18%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSS-KLEDTGTSCLGAEVEDLDL-DDYGNFELSPVR 287
+W T+ AEL D+EID YNFL +VNSS K ED TSCLGAE+EDLD DD+ ++ SPVR
Sbjct: 1218 LWDTRKAELSPDKEIDVYNFLHLVNSSSKPEDMATSCLGAEIEDLDQEDDFMEYDPSPVR 1277
Query: 286 ESGVDKPTFEDGIEFGL-------------KEDDGDWLSSGKKADSEVSSFMYS------ 164
+ G+DKPTFEDGIE+ L KE +G W S KK D E + +
Sbjct: 1278 DPGLDKPTFEDGIEYRLNGDDNDGLSKEDAKEPEGSWSSWTKKVDFEENDWTKKAGQSTW 1337
Query: 163 --------NDWAKKPEESTSGRKTNSEENDWSTLTVAEEEKSN-----SAWGRKTDSDGG 23
NDW KKPE+ST G+K NSEENDW+ +EE N S WG+K +S+
Sbjct: 1338 EKNVNTEENDWTKKPEQSTWGKKVNSEENDWNKKVNSEENDWNKKPEQSTWGKKVNSEEN 1397
Query: 22 GWGKKDE 2
W +K E
Sbjct: 1398 DWTEKPE 1404
Score = 70.9 bits (172), Expect = 4e-10
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 25/120 (20%)
Frame = -3
Query: 286 ESGVDKPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTSGRKTNSE 107
E+ +K + ++ K + W GKK +SE NDW +KPE+ST G+K NSE
Sbjct: 1365 ENDWNKKVNSEENDWNKKPEQSTW---GKKVNSE------ENDWTEKPEQSTWGKKVNSE 1415
Query: 106 ENDWST------------------------LTVAEEEKSNSAWGRKTDSD-GGGWGKKDE 2
ENDW+ AEE ++ SAWG+K DSD G GW KKDE
Sbjct: 1416 ENDWTNKPEESTWGKQVASEENDWKKMGEQSAWAEEAQNGSAWGKKVDSDVGRGWAKKDE 1475
>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
Length = 1379
Score = 115 bits (288), Expect = 1e-23
Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 11/162 (6%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDLDDYGNFELSPVRES 281
+W T+ +L D+E+D Y FL +VN S D GTSC+G E+EDLD + +FELSP RE
Sbjct: 1228 LWDTRKTDLNPDKELDVYGFLHLVNGSVPLDMGTSCIGTEIEDLD-QELMDFELSPEREP 1286
Query: 280 GVDKPTFEDGIEFGLKEDD------GDWLSSGKKADSEVSSFMYSNDWAKKPEESTSGRK 119
G++KPTF+D EFG+ ++ G W S G + +NDW+ K E + G
Sbjct: 1287 GLEKPTFDDEHEFGMNSNEGVTEVKGSWSSWGNVVAPD------TNDWSNKVESTGWGSA 1340
Query: 118 TNSE-----ENDWSTLTVAEEEKSNSAWGRKTDSDGGGWGKK 8
NSE E+ W EE+ ++ WG+K SD WG+K
Sbjct: 1341 VNSELKNKNEDSWGQ---NEEKPDDTVWGQKEKSDDTVWGQK 1379
>ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
gi|778702723|ref|XP_011655251.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Cucumis sativus]
gi|700195913|gb|KGN51090.1| hypothetical protein
Csa_5G435050 [Cucumis sativus]
Length = 1963
Score = 91.7 bits (226), Expect = 2e-16
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDL-DDYGNFELSPVRE 284
+W K + D+ +D YNFL MV S K E+ ++CLG E+ED+ + D+YG LSP
Sbjct: 1232 LWDQKELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIEDIMVEDEYGELTLSPEPF 1291
Query: 283 SGVDKPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTSGRKTNSEE 104
S +KP FED EF D+ S +KA S + W E + +G+ TNS +
Sbjct: 1292 STSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQW----ESNENGKATNSSD 1347
Query: 103 -NDWS----------TLTVAEEEKSNSAWGRKTDSDGGGWGKK 8
NDWS T+T A+E SNSAW + WG K
Sbjct: 1348 GNDWSGWGRKAEPDVTVTNAQENTSNSAWDTTS-----SWGNK 1385
>ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
gi|659072503|ref|XP_008465867.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Cucumis melo]
gi|659072505|ref|XP_008465874.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Cucumis melo]
Length = 1964
Score = 91.3 bits (225), Expect = 3e-16
Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDL-DDYGNFELSPVRE 284
+W K + D+ +D YNFL MV S K E+ ++CLG EVED+ + D+YG LSP
Sbjct: 1232 LWDQKELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEVEDIMVEDEYGELTLSPEPF 1291
Query: 283 SGVDKPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTSGRKT-NSE 107
S +KP FED EF D+ S +KA S + W E + +G+ T +S+
Sbjct: 1292 STSEKPVFEDSAEFEHCLDNDPGESKWEKAPSLGAVSTGGGQW----ESNGNGKATKSSD 1347
Query: 106 ENDWS----------TLTVAEEEKSNSAWGRKTDSDGGGWGKK 8
+NDWS T+T A+E SNSAW + WG K
Sbjct: 1348 DNDWSGWGRKAEPDVTVTNAQENTSNSAWDTTS-----SWGNK 1385
>ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1 [Nicotiana tomentosiformis]
Length = 1983
Score = 89.7 bits (221), Expect = 7e-16
Identities = 68/224 (30%), Positives = 95/224 (42%), Gaps = 71/224 (31%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDT-GTSCLGAEVEDLDLDDYG-NFELSPVR 287
+W TKN EL + D Y+FL +V SS ++ GTSCLGAEVE+L+++D LSP R
Sbjct: 1234 LWNTKNVELNIPDAHDVYSFLHLVRSSSAQEVEGTSCLGAEVEELEVEDEDMGLYLSPDR 1293
Query: 286 ESGVDKPTFEDGIEF--GLKEDDGD----------------------------------- 218
+SG DKPTFED EF G++ ++ D
Sbjct: 1294 DSGSDKPTFEDRAEFDNGIENENLDEGKLSGSAWEKASSENVKSGGSWDMAKTQNGAEKA 1353
Query: 217 ------WLSSGKKADSEVSSFMYSND---------WAKKPEE-----------------S 134
W S G+K D ++ S + W K +E S
Sbjct: 1354 VNQSDSWSSWGRKVDEAENNPRQSGNGEQLESWSAWGGKAKEVDSNPQQSGNTAQSGSWS 1413
Query: 133 TSGRKTNSEENDWSTLTVAEEEKSNSAWGRKTDSDGGGWGKKDE 2
G+K + N E+ S S+WG+K + DGG WGK+ E
Sbjct: 1414 AWGKKVDEAGNSPRQSGNEEQSGSLSSWGKKVEKDGGSWGKRVE 1457
>ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1 [Nicotiana sylvestris]
Length = 2055
Score = 89.4 bits (220), Expect = 1e-15
Identities = 67/222 (30%), Positives = 94/222 (42%), Gaps = 69/222 (31%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDT-GTSCLGAEVEDLDLDDYG-NFELSPVR 287
+W TKN EL + D Y+FL +V SS ++ GTSCLGAEVE+L+++D LSP R
Sbjct: 1234 IWNTKNVELNIPDAHDVYSFLHLVRSSSAQEVEGTSCLGAEVEELEVEDEDMGLYLSPDR 1293
Query: 286 ESGVDKPTFEDGIEF--GLKEDDGD----------------------------------- 218
+SG DKPTFED EF G++ ++ D
Sbjct: 1294 DSGSDKPTFEDRAEFDNGIENENLDEGKLSGSAWEKASSENVKSGGSWDMAKTQNGAEKA 1353
Query: 217 ------WLSSGKKADSEVSSFMYSND---------WAKKPEESTSGRK---TNSEENDWS 92
W S G+K D ++ S + W K +E S + ++ WS
Sbjct: 1354 VNQSDSWSSWGRKVDDAENNPRQSGNGEQLESWSAWGGKAKEVDSNPQQSGNTAQSGSWS 1413
Query: 91 TLTVAEEEKSN------------SAWGRKTDSDGGGWGKKDE 2
+E N S+WG+K + D G WGKK E
Sbjct: 1414 AWGKKVDEAGNSQSGNEEQSGSLSSWGKKVEKDTGSWGKKVE 1455
>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
Length = 1980
Score = 80.9 bits (198), Expect = 3e-13
Identities = 56/155 (36%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDLDD-YGNFELSPVRE 284
+W K A L + ID Y FL MV S + T+CLGA+V+DL LDD ++ LSP
Sbjct: 1238 LWDKKEACLDQEGSIDVYEFLNMVRCSANGEESTACLGADVDDLMLDDGMDDWNLSPEHN 1297
Query: 283 SGVDKPTFEDGIEFG--LKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTS----GR 122
G DKPTFED EF L DW + + S + D + ++ S GR
Sbjct: 1298 FGSDKPTFEDRAEFQNCLDNQPADWEKASYAVNGSSSGGNWGGDKNMETDKENSWSGWGR 1357
Query: 121 KTNSEENDWSTLTVAEEEKSNSAWGRKTDSDGGGW 17
+N ST E +KSNS W GGW
Sbjct: 1358 NAAETQNALSTKAHEESDKSNS-W-----DTAGGW 1386
>gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]
Length = 1821
Score = 80.9 bits (198), Expect = 3e-13
Identities = 56/155 (36%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDLDD-YGNFELSPVRE 284
+W K A L + ID Y FL MV S + T+CLGA+V+DL LDD ++ LSP
Sbjct: 1079 LWDKKEACLDQEGSIDVYEFLNMVRCSANGEESTACLGADVDDLMLDDGMDDWNLSPEHN 1138
Query: 283 SGVDKPTFEDGIEFG--LKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTS----GR 122
G DKPTFED EF L DW + + S + D + ++ S GR
Sbjct: 1139 FGSDKPTFEDRAEFQNCLDNQPADWEKASYAVNGSSSGGNWGGDKNMETDKENSWSGWGR 1198
Query: 121 KTNSEENDWSTLTVAEEEKSNSAWGRKTDSDGGGW 17
+N ST E +KSNS W GGW
Sbjct: 1199 NAAETQNALSTKAHEESDKSNS-W-----DTAGGW 1227
>ref|XP_002299207.2| hypothetical protein POPTR_0001s06460g [Populus trichocarpa]
gi|550346662|gb|EEE84012.2| hypothetical protein
POPTR_0001s06460g [Populus trichocarpa]
Length = 888
Score = 80.5 bits (197), Expect = 4e-13
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKL-EDTGTSCLGAEVEDLDLDDYGNFELSPVRE 284
+W TK A L + ID Y+FL MV S+ E++ T+CLGAEV+DL L+D ++ LSP
Sbjct: 202 LWDTKEACLNPEGGIDAYSFLNMVRSTAGGEESVTACLGAEVDDLILEDE-DWNLSPEHH 260
Query: 283 SGVDKPTFEDGIEF----GLKEDDGDWLSSGKKADSEVSSFMY---SNDWAKKPEESTSG 125
S DKPTFED EF G + + +W + D S+ + ND A K E+ S
Sbjct: 261 SSSDKPTFEDSAEFQDFLGNQPAESNWGKASSLKDGSWSAGNWDVDKNDSAGK-EKPWSL 319
Query: 124 RKTNSEEND--WSTLTVAEEEKSNSAWGRKTD----SDGGGWGKK 8
+++E ND W T A K NS+W + D + GW K
Sbjct: 320 GMSSAETNDVGWDT---AATRKINSSWNSENDVTQSNSLSGWATK 361
>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1127
Score = 78.6 bits (192), Expect = 2e-12
Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Frame = -3
Query: 451 TKNAELRADEEIDTYNFLRMV-NSSKLEDTGTSCLGAEVEDLDLDDYGNFELSPVRESGV 275
T+N E + D Y+FL +V N+S E GTSCLGAE+++L+ D+ LSP R+SG
Sbjct: 787 TRNVEWNIPDTRDVYSFLHLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDSGS 846
Query: 274 DKPTFEDGIEFGLKED---------------------DGDWLSSGKKADSEVSSFMYSND 158
+ PTFED EF E+ G W +GK + S+
Sbjct: 847 EMPTFEDRAEFDYNENLDEGKPSGSAWEEASSGSVKSGGSWDMAGKTQNGAEEGVNQSDS 906
Query: 157 WAKKPEESTSGRKTNSEENDWSTLTVAEEEKSNSAWGRK 41
W S+ G+K + EN+ E+ S S WGR+
Sbjct: 907 W------SSWGKKVDEPENNRQQSGSGEQSGSWSPWGRR 939
>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao] gi|508727914|gb|EOY19811.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
3 [Theobroma cacao]
Length = 1675
Score = 78.2 bits (191), Expect = 2e-12
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDL-DLDDYGNFELSPVRE 284
+W K ID YNFL M++S+ + T+CLG EV+DL D+D+ + LSP
Sbjct: 1229 LWDRKEVGFDQKSGIDVYNFLHMLSSASGPSSTTTCLGEEVDDLMDVDNMAEWSLSPEHS 1288
Query: 283 SGVDKPTFEDGIEFGLKEDDGDWLSSGKKADS--EVSSFMYSNDWAKKPEE------STS 128
+G+DKP FED +F D SS +K S +VSS+ S+ W KK E+ + +
Sbjct: 1289 NGLDKPVFEDAADFENDLDFQPAESSWEKGVSLDKVSSWNVSSAWNKKAEDGDKFAAALT 1348
Query: 127 GRKTNSEENDWSTLTVAEEEKSNSAWGRKTDSDGGGWG 14
S+ DW T ++ + +A ++ WG
Sbjct: 1349 STTKQSDWCDWGTSKSKTQDAAAAATSTTKKTEWCDWG 1386
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 78.2 bits (191), Expect = 2e-12
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDL-DLDDYGNFELSPVRE 284
+W K ID YNFL M++S+ + T+CLG EV+DL D+D+ + LSP
Sbjct: 1229 LWDRKEVGFDQKSGIDVYNFLHMLSSASGPSSTTTCLGEEVDDLMDVDNMAEWSLSPEHS 1288
Query: 283 SGVDKPTFEDGIEFGLKEDDGDWLSSGKKADS--EVSSFMYSNDWAKKPEE------STS 128
+G+DKP FED +F D SS +K S +VSS+ S+ W KK E+ + +
Sbjct: 1289 NGLDKPVFEDAADFENDLDFQPAESSWEKGVSLDKVSSWNVSSAWNKKAEDGDKFAAALT 1348
Query: 127 GRKTNSEENDWSTLTVAEEEKSNSAWGRKTDSDGGGWG 14
S+ DW T ++ + +A ++ WG
Sbjct: 1349 STTKQSDWCDWGTSKSKTQDAAAAATSTTKKTEWCDWG 1386
>ref|XP_008375320.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Malus
domestica]
Length = 945
Score = 77.8 bits (190), Expect = 3e-12
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDL-DLDDYGNFELSPVRE 284
+W T+ L + +D +NFL MV+++ E+ T LGAEV+DL +D+ + LSP +
Sbjct: 223 LWDTREGGLNQEGGLDVFNFLHMVSTANGEEATTGALGAEVDDLMVVDELADSCLSPELD 282
Query: 283 SGVDKPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEESTSGRKTNSEE 104
SG+D+P FED IEF K + + +K+ E S ++ + ++ S+ G KT + E
Sbjct: 283 SGLDRPVFEDIIEFEDKSE-----TPPRKSSWENDSSVWGTNTTREDATSSWG-KTPARE 336
Query: 103 NDWSTLTVAE-EEKSNSAWGRKTDSDG--GGWGKKDE 2
ST + + E + AWG T +G WGK E
Sbjct: 337 ATTSTWGIDKAAEDTTPAWGTNTAREGATSAWGKTRE 373
>ref|XP_007219786.1| hypothetical protein PRUPE_ppa024567mg [Prunus persica]
gi|462416248|gb|EMJ20985.1| hypothetical protein
PRUPE_ppa024567mg [Prunus persica]
Length = 792
Score = 77.0 bits (188), Expect = 5e-12
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDL-DDYGNFELSPVRE 284
+W T+ EL + +D +NFL MV+++ +E+ T LGAEV+DL L D+ + SP
Sbjct: 254 LWDTREVELTQEGGLDVFNFLHMVSTANVEEATTGALGAEVDDLMLVDEMADSSFSPELN 313
Query: 283 SGVDKPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDWAKKPEEST-------SG 125
S D+P FED +EF K D S+ +K S + DW+ T S
Sbjct: 314 SSFDRPVFEDLVEFDDKLGDLPEKSNWEKDSSFHTDSNGGKDWSVDKNVGTVAVPDVWSS 373
Query: 124 RKTNSEENDWSTLTVAEEE------------KSNSAWGRKT--DSDGGGWG 14
T+ ENDW V E++ ++SAW T + WG
Sbjct: 374 WGTDKGENDWCGRGVGEDDFVSLSGKKSGVLNTSSAWATNTAREDAASAWG 424
>ref|XP_011020393.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Populus
euphratica] gi|743817375|ref|XP_011020394.1| PREDICTED:
DNA-directed RNA polymerase V subunit 1-like [Populus
euphratica] gi|743817379|ref|XP_011020395.1| PREDICTED:
DNA-directed RNA polymerase V subunit 1-like [Populus
euphratica] gi|743817383|ref|XP_011020396.1| PREDICTED:
DNA-directed RNA polymerase V subunit 1-like [Populus
euphratica]
Length = 1916
Score = 76.6 bits (187), Expect = 6e-12
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKL-EDTGTSCLGAEVEDLDLDDYGNFELSPVRE 284
+W TK A L + +D Y+FL MV S+ E++ T+CLGAEV+DL L+D ++ LSP
Sbjct: 1230 LWDTKEACLNPEGSMDAYSFLNMVRSTAGGEESVTACLGAEVDDLMLEDE-DWNLSPEHN 1288
Query: 283 SGVDKPTFEDGIEF----GLKEDDGDWLSSGKKADSEVSSFMY---SNDWAKKPEESTSG 125
S DKPTFED EF G + + +W D SS + ND A K + + G
Sbjct: 1289 SSSDKPTFEDSAEFQDFLGNQPAESNWEKISSLKDRPRSSGNWDVDKNDGAVKEKPWSLG 1348
Query: 124 RKTNSEEND-----WSTLTVAEEEKSNSAWGRKTD----SDGGGWGKK 8
T +E ND W T T +N++W + + + GW K
Sbjct: 1349 MNT-AEANDVASSGWDTATA---RMTNNSWNLENNVAQSNSFSGWATK 1392
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 76.6 bits (187), Expect = 6e-12
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKL-EDTGTSCLGAEVEDLDLDDYGNFELSPVRE 284
+W TK A L + +D Y+FL MV S+ E++ T+CLGAEV+DL L+D ++ LSP
Sbjct: 1234 LWDTKEACLNPEGSMDVYSFLNMVRSTAGGEESVTACLGAEVDDLMLEDE-DWNLSPEHN 1292
Query: 283 SGVDKPTFEDGIEF----GLKEDDGDWLSSGKKADSEVSSFMY---SNDWAKKPEESTSG 125
S DKPTFED EF G + + +W D SS + ND A K + + G
Sbjct: 1293 SSSDKPTFEDSAEFQDFLGNQPAESNWEKISSLKDRSRSSGNWDVDKNDGAVKEKPWSLG 1352
Query: 124 RKTNSEEND-----WSTLTVAEEEKSNSAWGRKTD----SDGGGWGKK 8
T +E ND W T A +N++W + + + GW K
Sbjct: 1353 MNT-AEANDVASSGWDT---AAARTTNNSWNSENNVAQSNSFSGWATK 1396
>ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1 [Solanum lycopersicum]
Length = 1968
Score = 76.3 bits (186), Expect = 8e-12
Identities = 54/160 (33%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Frame = -3
Query: 451 TKNAELRADEEIDTYNFLRMV-NSSKLEDTGTSCLGAEVEDLDLDDYGNFELSPVRESGV 275
T+N E + D Y+FL +V N+S E GTSCLGAE+++L+ D+ LSP R+SG
Sbjct: 1238 TRNVEWNIPDTRDVYSFLHLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDSGS 1297
Query: 274 DKPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYS-NDWAKKPEESTSGRKTNSEEND 98
+ PTFED EF E+ + SG + S + S W +G+ N E
Sbjct: 1298 EMPTFEDRAEFDYNENLDEGKPSGSAWEKASSGSVKSGGSW------DMAGKTQNGAEEG 1351
Query: 97 WSTLTVAEEEKSNSAWGRKTD----------SDGGGWGKK 8
+ S SAWG+K D WGKK
Sbjct: 1352 ------VNQSDSWSAWGKKVDGSNTQQSGVTEQSESWGKK 1385
>ref|XP_011469364.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1 [Fragaria vesca subsp. vesca]
Length = 2012
Score = 75.9 bits (185), Expect = 1e-11
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Frame = -3
Query: 460 VWGTKNAELRADEEIDTYNFLRMVNSSKLEDTGTSCLGAEVEDLDLD-DYGNFELSPVRE 284
+W TK L +D +NFL MVN++ E+ T+ LG E++DL D + G+ LSP
Sbjct: 1240 LWDTKEGGLNEVGGVDVFNFLHMVNAANGEELTTAALGTEIDDLVPDYENGDVSLSPEHN 1299
Query: 283 SGVDKPTFEDGIEFGLKEDDGDWLSSGKKADSEVSSFMYSNDW------------AKKPE 140
S DKP FED +EF D+ + + DS ++ DW A+
Sbjct: 1300 SSSDKPVFEDIVEF---PDNFENVPGKSSWDSIYTASTGGKDWGAVKIGTQDGISAETQA 1356
Query: 139 ESTS--GRKTNSEE--NDWSTLTVAEEEKSNSAWGRKT--DSDGGGWGKK 8
+STS G KT E+ + W T A E+ + SAWG KT + WG K
Sbjct: 1357 DSTSAWGIKTPREDDTSPWGTAKTATED-APSAWGTKTVKEDAPSAWGIK 1405