BLASTX nr result

ID: Perilla23_contig00024016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00024016
         (419 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007038295.1| F-box family protein, putative [Theobroma ca...    46   3e-07

>ref|XP_007038295.1| F-box family protein, putative [Theobroma cacao]
           gi|508775540|gb|EOY22796.1| F-box family protein,
           putative [Theobroma cacao]
          Length = 407

 Score = 45.8 bits (107), Expect(2) = 3e-07
 Identities = 20/46 (43%), Positives = 32/46 (69%)
 Frame = +2

Query: 23  STQQLWELSLAFAPSKSPHYKIVCVKATRNPLSDHERHCWVEVYDS 160
           S++  + +SLAF PSKSPHYK++C++   + L DH +   +E+Y S
Sbjct: 163 SSRNTFGVSLAFDPSKSPHYKVICIRNCDSDLPDHYQ---IEIYSS 205



 Score = 35.0 bits (79), Expect(2) = 3e-07
 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 23/93 (24%)
 Frame = +1

Query: 181 FTAPIAANFSSGVH--------SCWSS---------------MA*EGGGAAVHRKLQEPN 291
           F API   F +GV         S W                 MA   G   ++R   +  
Sbjct: 217 FAAPINVQFKNGVFWNGALHWLSDWGDSLCFDVEEERIRDLPMAPVVGDVRLYRYFGQSG 276

Query: 292 GYLYHFIIVSHLGDKSIAVYELQKDYSQWFLKY 390
           G+L H I V         VYE+++DYS WF+KY
Sbjct: 277 GHL-HLIEVYGSDTLQFDVYEMERDYSGWFVKY 308


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