BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00023116
         (448 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011069934.1| PREDICTED: pentatricopeptide repeat-containi...   128   2e-27
ref|XP_012837595.1| PREDICTED: pentatricopeptide repeat-containi...   124   3e-26
emb|CDP02999.1| unnamed protein product [Coffea canephora]             71   4e-10
ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-08
ref|XP_009797419.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containi...    63   8e-08
ref|XP_009620134.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_002533731.1| pentatricopeptide repeat-containing protein,...    58   3e-06
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]    56   9e-06

>ref|XP_011069934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Sesamum indicum]
          Length = 838

 Score =  128 bits (321), Expect = 2e-27
 Identities = 72/132 (54%), Positives = 83/132 (62%), Gaps = 3/132 (2%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQPTKSA---SHHRLKFNTXXXXXXXXXXXXXXXXXXXXXXXXLDSL 219
           MEGT+FPNRP  P+ PTK A   SH RLKFNT                         DSL
Sbjct: 1   MEGTLFPNRPTLPVPPTKPAFNPSHQRLKFNTSTLPLPPLQQQQQSSNSSHTFPL--DSL 58

Query: 218 LQHLLHVSCPVNSSLASSHVVPSRNQESLSANFRKDAGGSSIAIPVIGDRSMNDGGSLDY 39
           LQHLLH+S PV SSL SSH+ PS N +SLSA+FRKD  GSS+A   IG+ S+ D  SLD+
Sbjct: 59  LQHLLHISSPVKSSLTSSHIGPSHNHDSLSAHFRKD-DGSSVATQRIGENSVKDEASLDF 117

Query: 38  LPLKCKLILNSI 3
           LPLKCK +LNSI
Sbjct: 118 LPLKCKFLLNSI 129


>ref|XP_012837595.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Erythranthe guttatus]
          Length = 833

 Score =  124 bits (311), Expect = 3e-26
 Identities = 72/132 (54%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQPTKSAS---HHRLKFNTXXXXXXXXXXXXXXXXXXXXXXXXLDSL 219
           MEGT+FPNRPAFP+  TK +S   H+RLKFNT                         DSL
Sbjct: 1   MEGTLFPNRPAFPVPTTKPSSNPNHNRLKFNTSSLPLPPLIPLNQQQQQSTNSFPL-DSL 59

Query: 218 LQHLLHVSCPVNSSLASSHVVPSRNQESLSANFRKDAGGSSIAIPVIGDRSMNDGGSLDY 39
           LQHLLH+S PV SSL SSHVVPS NQ+SLSA+FRKD    ++ +   G    ND GSLD+
Sbjct: 60  LQHLLHISAPVKSSLTSSHVVPSHNQDSLSAHFRKD---DAVLVGTAG----NDEGSLDF 112

Query: 38  LPLKCKLILNSI 3
           LPLKCKL+LNSI
Sbjct: 113 LPLKCKLLLNSI 124


>emb|CDP02999.1| unnamed protein product [Coffea canephora]
          Length = 852

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 56/152 (36%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQPTKSA---SHHRLKFNTXXXXXXXXXXXXXXXXXXXXXXXXL--- 228
           MEGT+FPNRP FPIQ TK      + RLKFNT                            
Sbjct: 1   MEGTLFPNRPGFPIQQTKPTIQPPNQRLKFNTSTLLPPLHQQLLPQQQQQPKTACSSSFP 60

Query: 227 -DSLLQHLLHVS---------CPVNSSLASSHVVPSRNQESLSANFRKDAGGSSIAIPVI 78
            DSLLQHLLH+S            N +  +S ++ S N E     F +    +SIAIP I
Sbjct: 61  IDSLLQHLLHISNNKPPIIKSAKSNGTHFTSALISSENGE-----FEETRLANSIAIPRI 115

Query: 77  -------GDRSMNDGGSLDYLPLKCKLILNSI 3
                    ++ +  G+LD+LPL CKL+LNSI
Sbjct: 116 ERYREEHAFQTGSGNGALDFLPLDCKLMLNSI 147


>ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic-like [Solanum tuberosum]
          Length = 842

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQ---PTKSASHHRLKFN---TXXXXXXXXXXXXXXXXXXXXXXXXL 228
           MEG++FPNRP  PIQ   PT      RLK N   T                        L
Sbjct: 1   MEGSLFPNRPILPIQSTKPTPLPPTQRLKLNPTTTSSPLPPLKQQQQQTPSSSTSTSFPL 60

Query: 227 DSLLQHLLHVSCPVNSSLASSHVVPSRNQESLSANFRKD---AGGSSIAIPVIGDRSMND 57
           DSLLQHLLHVS         S  + + +  SL  +   D    G + + +P +      D
Sbjct: 61  DSLLQHLLHVSSSNPPRTVKSSRISNTHLSSLPVSLENDDTLFGNTRVTVPKM---ESFD 117

Query: 56  GGSLDYLPLKCKLILNSI 3
            GSL++LPL CKL+++SI
Sbjct: 118 DGSLEFLPLNCKLLIDSI 135


>ref|XP_009797419.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Nicotiana sylvestris]
          Length = 845

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQ---PTKSASHHRLKFNTXXXXXXXXXXXXXXXXXXXXXXXXLDSL 219
           MEG+++PNRP  P+Q   PT    + RLK N                         LDSL
Sbjct: 1   MEGSLYPNRPILPVQSTRPTPLPPNQRLKLNPTSISPLPPLKQQQQQHPPSSTSFPLDSL 60

Query: 218 LQHLLHVSCP----------VNSSLASSHVVPSRNQES---LSANFRKDAGGSSIAIPVI 78
           LQ LLHVS            + ++  SS  +   NQE+   L  N R       + +P +
Sbjct: 61  LQQLLHVSSKNPPRTIKFSRIGNTHLSSLPISLENQENDDTLLENMR-------VTVPKL 113

Query: 77  GDRSMNDGGSLDYLPLKCKLILNSI 3
                +D GSLD+LPL CKL+++SI
Sbjct: 114 ESFGEDDDGSLDFLPLNCKLMIDSI 138


>ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Solanum lycopersicum]
          Length = 842

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQ---PTKSASHHRLKFN---TXXXXXXXXXXXXXXXXXXXXXXXXL 228
           MEG++FPNRP  PIQ   PT      RLK N   T                        L
Sbjct: 1   MEGSLFPNRPILPIQSTKPTPLPPTQRLKLNPTTTTSPLPPLKQQQQQTPSSSTSTSFPL 60

Query: 227 DSLLQHLLHVSCPVNSSLASSHVVPSRNQESLSANFRKD---AGGSSIAIPVIGDRSMND 57
           DSLLQHLLHVS         S  + + +  +L  +   D    G + + +P +      D
Sbjct: 61  DSLLQHLLHVSSSNPPRTVKSSRISNTHLSTLPVSLENDDTLFGNTRVTVPKM---ESFD 117

Query: 56  GGSLDYLPLKCKLILNSI 3
            GSL++LPL CKL+++SI
Sbjct: 118 DGSLEFLPLNCKLMIDSI 135


>ref|XP_009620134.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 846

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQPTKSAS---HHRLKFN-TXXXXXXXXXXXXXXXXXXXXXXXXLDS 222
           MEG+++PNRP  P+Q TK      + RLK N T                        LDS
Sbjct: 1   MEGSLYPNRPILPVQSTKPTPLPPNQRLKLNPTTISPLPPLKQQQQQQPPSSSTSFPLDS 60

Query: 221 LLQHLLHVSCP----------VNSSLASSHVVPSRNQES---LSANFRKDAGGSSIAIPV 81
           LLQ LLHVS            + ++  SS  +   NQE+   L  N R       + +P 
Sbjct: 61  LLQQLLHVSSSTPPRTIKFSRIGNTHLSSLPISLENQENDDTLLENMR-------VTVPK 113

Query: 80  IGDRSMNDGGSLDYLPLKCKLILNSI 3
           +     +D GSLD+LPL CKL+++SI
Sbjct: 114 LESFGEDDDGSLDFLPLNCKLMIDSI 139


>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Vitis vinifera]
           gi|297735424|emb|CBI17864.3| unnamed protein product
           [Vitis vinifera]
          Length = 821

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 46/131 (35%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQPTKSA--SHHRLKFNTXXXXXXXXXXXXXXXXXXXXXXXXLDSLL 216
           MEGT+FPNRP+FPI  TKS   +H  +KFN                         LDSLL
Sbjct: 1   MEGTLFPNRPSFPIPRTKSTQPNHPHVKFN--------PATLPLPPQSPSPPSLPLDSLL 52

Query: 215 QHLLHVSCPVNSSLASSHVVPSRNQESLSANFRKDAGGSSIAIPVIGDRSMNDGGSLDYL 36
           QHLLH S P +     +   P  N +  SA       GS        + + +  GS+++L
Sbjct: 53  QHLLHFSSPTHKPKPIN--PPKTNLKKFSAVSVSQLEGSV-------EEAQSPDGSVEFL 103

Query: 35  PLKCKLILNSI 3
             K K +LNSI
Sbjct: 104 SRKGKFLLNSI 114


>ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526356|gb|EEF28650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 47/133 (35%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQPTKSASHHR--LKFNTXXXXXXXXXXXXXXXXXXXXXXXXLDSLL 216
           MEGT+FPN+P +PI PTK        LKF++                         DSLL
Sbjct: 1   MEGTLFPNKPVYPI-PTKRPQQPNPPLKFSS-----AKLPPSPPPPPSSPQLPSRFDSLL 54

Query: 215 QHLLHVSC-PVNSSLASSHVVPSRNQESLS-ANFRKDAGGSSIAIPVIGDRSMNDGGSLD 42
           QHLLH+S  P N+ L S  +     ++ L  A  RK        +    D+ ++D G L+
Sbjct: 55  QHLLHLSSPPSNTRLPSLQISGDLTKKQLQPAPHRKPNSFLEFEVDKEEDKDVSDSGFLE 114

Query: 41  YLPLKCKLILNSI 3
           YL  K KLIL SI
Sbjct: 115 YLSRKGKLILGSI 127


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 45/131 (34%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
 Frame = -3

Query: 389 MEGTIFPNRPAFPIQPTKSA--SHHRLKFNTXXXXXXXXXXXXXXXXXXXXXXXXLDSLL 216
           MEGT+FPNRP+FPI  TK    +H  +KFN                         LDSLL
Sbjct: 1   MEGTLFPNRPSFPIPRTKXTXPNHPHVKFN--------PATLPLPPQSPSPPSLPLDSLL 52

Query: 215 QHLLHVSCPVNSSLASSHVVPSRNQESLSANFRKDAGGSSIAIPVIGDRSMNDGGSLDYL 36
           QHLLH S P +     +   P  N +  SA       GS        + + +  GS+++L
Sbjct: 53  QHLLHFSSPTHKPKPIN--PPKTNLKKFSAVSVSQLEGSV-------EEAQSPDGSVEFL 103

Query: 35  PLKCKLILNSI 3
             K K +LNSI
Sbjct: 104 SRKGKFLLNSI 114