BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00022636
         (430 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097502.1| PREDICTED: DNA-directed RNA polymerases II a...   167   3e-39
ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II a...   165   1e-38
gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlise...   161   2e-37
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil...   161   2e-37
gb|KJB27153.1| hypothetical protein B456_004G280900 [Gossypium r...   157   2e-36
ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II a...   157   2e-36
emb|CDP10286.1| unnamed protein product [Coffea canephora]            157   2e-36
ref|XP_012080620.1| PREDICTED: DNA-directed RNA polymerases II a...   156   5e-36
gb|KDO66463.1| hypothetical protein CISIN_1g030833mg [Citrus sin...   156   7e-36
gb|KDO66461.1| hypothetical protein CISIN_1g030833mg [Citrus sin...   156   7e-36
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   156   7e-36
ref|XP_012076737.1| PREDICTED: DNA-directed RNA polymerases II a...   155   1e-35
ref|XP_008451219.1| PREDICTED: DNA-directed RNA polymerases II a...   155   1e-35
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases II a...   155   1e-35
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps...   154   3e-35
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ...   153   6e-35
ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III ...   153   6e-35
ref|XP_010047920.1| PREDICTED: DNA-directed RNA polymerases II a...   153   6e-35
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a...   152   7e-35
ref|XP_010535925.1| PREDICTED: DNA-directed RNA polymerases II a...   152   7e-35

>ref|XP_011097502.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Sesamum indicum] gi|747046072|ref|XP_011097515.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Sesamum indicum]
          Length = 206

 Score =  167 bits (423), Expect = 3e-39
 Identities = 85/105 (80%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           MVMSEEEITRLHRIRKTVMQML+DRGYM    E++M K QFIQKYGENMKREDL+I KGM
Sbjct: 1   MVMSEEEITRLHRIRKTVMQMLKDRGYMVGAFEIDMPKHQFIQKYGENMKREDLVIQKGM 60

Query: 134 -RNNSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
             N+SDQIYVFFP+E KVGVKTMKTYTNRMK++ V+RAILVVQQN
Sbjct: 61  GGNSSDQIYVFFPEEQKVGVKTMKTYTNRMKEEGVHRAILVVQQN 105


>ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Erythranthe guttatus] gi|848881798|ref|XP_012841244.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Erythranthe guttatus]
           gi|604328677|gb|EYU34199.1| hypothetical protein
           MIMGU_mgv1a013932mg [Erythranthe guttata]
          Length = 206

 Score =  165 bits (418), Expect = 1e-38
 Identities = 79/105 (75%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           MV+S+EEITRL R+RK VMQML+DRGYM  D E++MTK QF+QKYGENMKREDL+I KG+
Sbjct: 1   MVLSDEEITRLVRVRKNVMQMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINKGL 60

Query: 134 RNN-SDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RNN SDQIY+FFP+E KVGVKTMKTYTNRMK++ V+RA+L+VQQN
Sbjct: 61  RNNSSDQIYIFFPEEPKVGVKTMKTYTNRMKEEGVHRAVLIVQQN 105


>gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlisea aurea]
          Length = 208

 Score =  161 bits (408), Expect = 2e-37
 Identities = 75/106 (70%), Positives = 96/106 (90%), Gaps = 1/106 (0%)
 Frame = -3

Query: 317 KMVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKG 138
           +M++SEE+ITRL+RIRKT+MQML+DRGY+  D E+EMTK+QFIQKYGENMKRED  ++KG
Sbjct: 1   RMILSEEQITRLYRIRKTLMQMLKDRGYIVGDFEIEMTKSQFIQKYGENMKREDQTVLKG 60

Query: 137 MRNN-SDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           +RNN SDQIYVFFP+E KVGVK +K YTN+MK++ +++AILVVQQN
Sbjct: 61  LRNNPSDQIYVFFPEEPKVGVKPIKAYTNKMKEEGIHKAILVVQQN 106


>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score =  161 bits (408), Expect = 2e-37
 Identities = 82/105 (78%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           MV+S++EI RL RIRKTVMQML+DRGY   D E+ MTK QFI KYGENMKREDL+I K  
Sbjct: 1   MVLSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTK 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN NSDQIYVFFPDEAKVGVKTMKTYTNRMK +NV RA+LVVQQN
Sbjct: 61  RNDNSDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQN 105


>gb|KJB27153.1| hypothetical protein B456_004G280900 [Gossypium raimondii]
          Length = 201

 Score =  157 bits (398), Expect = 2e-36
 Identities = 80/105 (76%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           MV+S++EI RL RIRKTVMQML+DRGY   D E+ ++K QFI KYGENMKREDL+I K  
Sbjct: 1   MVLSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEINLSKQQFISKYGENMKREDLVINKTK 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN NSDQIYVFFP+EAKVGVKTMKTYTNRMK +NV RAILVVQQN
Sbjct: 61  RNDNSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQN 105


>ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Gossypium raimondii] gi|823154631|ref|XP_012477197.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Gossypium raimondii]
           gi|728836967|gb|KHG16410.1| dna-directed rna polymerases
           i, ii, and iii subunit rpabc1 [Gossypium arboreum]
           gi|763759819|gb|KJB27150.1| hypothetical protein
           B456_004G280900 [Gossypium raimondii]
           gi|763759820|gb|KJB27151.1| hypothetical protein
           B456_004G280900 [Gossypium raimondii]
           gi|763759821|gb|KJB27152.1| hypothetical protein
           B456_004G280900 [Gossypium raimondii]
          Length = 206

 Score =  157 bits (398), Expect = 2e-36
 Identities = 80/105 (76%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           MV+S++EI RL RIRKTVMQML+DRGY   D E+ ++K QFI KYGENMKREDL+I K  
Sbjct: 1   MVLSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEINLSKQQFISKYGENMKREDLVINKTK 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN NSDQIYVFFP+EAKVGVKTMKTYTNRMK +NV RAILVVQQN
Sbjct: 61  RNDNSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQN 105


>emb|CDP10286.1| unnamed protein product [Coffea canephora]
          Length = 206

 Score =  157 bits (398), Expect = 2e-36
 Identities = 78/105 (74%), Positives = 91/105 (86%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           M +S+EE+TRLHRIRKTVM+ML+DR Y   D E++M K +FIQKYGENMKREDL+I K  
Sbjct: 1   MTLSDEEVTRLHRIRKTVMEMLQDRAYFVTDKEIQMEKREFIQKYGENMKREDLVINKSK 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN +SDQIYVFFP+E KVGVKTMKTYTNRMK++NV RAILVVQQN
Sbjct: 61  RNDSSDQIYVFFPEEPKVGVKTMKTYTNRMKNENVFRAILVVQQN 105


>ref|XP_012080620.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Jatropha curcas] gi|802658502|ref|XP_012080621.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like [Jatropha curcas]
           gi|643720408|gb|KDP30787.1| hypothetical protein
           JCGZ_13730 [Jatropha curcas]
          Length = 206

 Score =  156 bits (395), Expect = 5e-36
 Identities = 78/105 (74%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           M +SE+EI RL RIRKTVMQML+DRGY+  D E+ MT+ QFI KYGENMKREDL+I K  
Sbjct: 1   MTLSEDEIKRLFRIRKTVMQMLKDRGYLVTDYEINMTREQFISKYGENMKREDLVINKSR 60

Query: 134 RNN-SDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN  SDQIYVFFP+E KVGVKTMKTYTNRMK++NV RA+LVVQQN
Sbjct: 61  RNEPSDQIYVFFPEEQKVGVKTMKTYTNRMKNENVYRAVLVVQQN 105


>gb|KDO66463.1| hypothetical protein CISIN_1g030833mg [Citrus sinensis]
          Length = 143

 Score =  156 bits (394), Expect = 7e-36
 Identities = 79/105 (75%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           M +S+EEI RL RIR+TVMQMLRDRGY   D E+ M+K QFI K+GENMKREDL+I K +
Sbjct: 1   MTLSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKAL 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN +SDQIYVFFPDE KVGVKTMKTYTNRMK +NV RAILVVQQN
Sbjct: 61  RNDSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQN 105


>gb|KDO66461.1| hypothetical protein CISIN_1g030833mg [Citrus sinensis]
           gi|641847583|gb|KDO66462.1| hypothetical protein
           CISIN_1g030833mg [Citrus sinensis]
          Length = 170

 Score =  156 bits (394), Expect = 7e-36
 Identities = 79/105 (75%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           M +S+EEI RL RIR+TVMQMLRDRGY   D E+ M+K QFI K+GENMKREDL+I K +
Sbjct: 1   MTLSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKAL 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN +SDQIYVFFPDE KVGVKTMKTYTNRMK +NV RAILVVQQN
Sbjct: 61  RNDSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQN 105


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  156 bits (394), Expect = 7e-36
 Identities = 79/105 (75%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           M +S+EEI RL RIR+TVMQMLRDRGY   D E+ M+K QFI K+GENMKREDL+I K +
Sbjct: 1   MTLSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKAL 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN +SDQIYVFFPDE KVGVKTMKTYTNRMK +NV RAILVVQQN
Sbjct: 61  RNDSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQN 105


>ref|XP_012076737.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Jatropha curcas] gi|643724505|gb|KDP33706.1|
           hypothetical protein JCGZ_07277 [Jatropha curcas]
          Length = 206

 Score =  155 bits (392), Expect = 1e-35
 Identities = 77/105 (73%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           M +SE+EI +L RIRKTVMQML+DRGY+  D E+ MT+ QFI KYGENMKREDL+I K  
Sbjct: 1   MTLSEDEIKKLFRIRKTVMQMLKDRGYLVTDYEINMTREQFISKYGENMKREDLVINKSR 60

Query: 134 RNN-SDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN  SDQIY+FFP+E KVGVKTMKTYTNRMK++NV RAILVVQQN
Sbjct: 61  RNEPSDQIYIFFPEEQKVGVKTMKTYTNRMKNENVYRAILVVQQN 105


>ref|XP_008451219.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Cucumis melo]
          Length = 207

 Score =  155 bits (391), Expect = 1e-35
 Identities = 78/105 (74%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           MV+SEEEITRL RIRKTV QMLRDRGY   D E++MT+ QF QKYGENMKRED++I K  
Sbjct: 1   MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN +SDQIYVFFP+EAKVG+K +KTYT RMK +NV RAILVVQQN
Sbjct: 61  RNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQN 105


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Cucumis sativus] gi|778727309|ref|XP_011659238.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like [Cucumis sativus]
           gi|700189484|gb|KGN44717.1| hypothetical protein
           Csa_7G374590 [Cucumis sativus]
          Length = 207

 Score =  155 bits (391), Expect = 1e-35
 Identities = 78/105 (74%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           MV+SEEEITRL RIRKTV QMLRDRGY   D E++MT+ QF QKYGENMKRED++I K  
Sbjct: 1   MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN +SDQIYVFFP+EAKVG+K +KTYT RMK +NV RAILVVQQN
Sbjct: 61  RNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQN 105


>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
           gi|482567281|gb|EOA31470.1| hypothetical protein
           CARUB_v10014656mg [Capsella rubella]
          Length = 205

 Score =  154 bits (388), Expect = 3e-35
 Identities = 75/104 (72%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
 Frame = -3

Query: 311 VMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGMR 132
           +++EEEI RL+RI KT+MQML+DRGY  AD E+ +TK QFI+KYG+NMKREDL+ +K  R
Sbjct: 1   MLTEEEIKRLYRIHKTLMQMLKDRGYFIADSEITITKQQFIRKYGDNMKREDLVTLKAKR 60

Query: 131 N-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           N NSDQ+Y+FFPDEAKVGVKTMK YTNRMK +NV RAILVVQQN
Sbjct: 61  NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQN 104


>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
           gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
           Full=DNA-directed RNA polymerases II and IV subunit 5A;
           Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
           II subunit E; AltName: Full=RNA polymerase I, II and III
           24.3 kDa subunit; Short=AtRPB24.3
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           NRPB5 [Arabidopsis thaliana]
          Length = 205

 Score =  153 bits (386), Expect = 6e-35
 Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
 Frame = -3

Query: 311 VMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGMR 132
           +++EEE+ RL+RI+KT+MQMLRDRGY  AD E+ MTK QFI+K+G+NMKREDL+ +K  R
Sbjct: 1   MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKR 60

Query: 131 N-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           N NSDQ+Y+FFPDEAKVGVKTMK YTNRMK +NV RAILVVQQN
Sbjct: 61  NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQN 104


>ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis] gi|587928674|gb|EXC15864.1| DNA-directed RNA
           polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  153 bits (386), Expect = 6e-35
 Identities = 78/105 (74%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           MV+SE+EITRL RIR+TVMQMLRDR Y+  D E+ MTK QF  KYGENMKREDL+I K  
Sbjct: 1   MVLSEDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSR 60

Query: 134 RNNS-DQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN+S DQIYVFFP+E KVGVKTMKTY NRMK +NV RA+LVVQQN
Sbjct: 61  RNDSPDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQN 105


>ref|XP_010047920.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Eucalyptus grandis] gi|629115273|gb|KCW79948.1|
           hypothetical protein EUGRSUZ_C01278 [Eucalyptus grandis]
          Length = 220

 Score =  153 bits (386), Expect = 6e-35
 Identities = 77/103 (74%), Positives = 89/103 (86%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 MSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGMRN 129
           +SEEEITRLHRI++TV+QMLRDRGY+  D E+ MT+ QFI+KYGENMKREDL+I K  RN
Sbjct: 17  LSEEEITRLHRIQRTVLQMLRDRGYLVTDGELNMTRFQFIEKYGENMKREDLVINKHKRN 76

Query: 128 -NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
            +SDQIYVFFP+EAKVGVKTMKTYT RM  +NV RAIL VQQN
Sbjct: 77  ESSDQIYVFFPEEAKVGVKTMKTYTTRMNSENVFRAILAVQQN 119


>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Populus euphratica]
          Length = 206

 Score =  152 bits (385), Expect = 7e-35
 Identities = 78/105 (74%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           M ++EEEI RL RIRKTVMQML+DRGY   D E++MT+ QF  KYG NMKREDL+I K  
Sbjct: 1   MTLTEEEIKRLFRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN +SDQIYVFFP+EAKVGVKTMKTYTNRMK +NV RAILVVQQN
Sbjct: 61  RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQN 105


>ref|XP_010535925.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Tarenaya hassleriana]
          Length = 206

 Score =  152 bits (385), Expect = 7e-35
 Identities = 76/105 (72%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 MVMSEEEITRLHRIRKTVMQMLRDRGYMAADVEVEMTKTQFIQKYGENMKREDLMIIKGM 135
           M +SEEE+ RL R+RKT+MQML+DR Y   D E+ MTK QFI KYGENMKREDL + K  
Sbjct: 1   MTLSEEELKRLFRVRKTLMQMLKDRDYFVTDSEIGMTKGQFIMKYGENMKREDLDVQKAK 60

Query: 134 RN-NSDQIYVFFPDEAKVGVKTMKTYTNRMKDDNVNRAILVVQQN 3
           RN +SDQIY+FFP+EAKVGVKTMKTYTNRMK +NV+RAILVVQQN
Sbjct: 61  RNDSSDQIYIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQN 105