BLASTX nr result
ID: Perilla23_contig00022232
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Perilla23_contig00022232 (1315 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I sub... 583 e-163 ref|XP_012834350.1| PREDICTED: DNA-directed RNA polymerase I sub... 545 e-152 ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I sub... 459 e-126 ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I sub... 456 e-125 gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise... 450 e-123 emb|CDP10074.1| unnamed protein product [Coffea canephora] 444 e-121 ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 444 e-121 ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 443 e-121 ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub... 385 e-104 emb|CBI29879.3| unnamed protein product [Vitis vinifera] 385 e-104 ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 370 1e-99 ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub... 363 2e-97 ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I sub... 360 2e-96 ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I sub... 360 2e-96 gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus g... 360 2e-96 ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro... 357 1e-95 ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro... 357 1e-95 ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 357 1e-95 ref|XP_008392178.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 356 2e-95 ref|XP_009345036.1| PREDICTED: DNA-directed RNA polymerase I sub... 354 8e-95 >ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Sesamum indicum] Length = 1701 Score = 583 bits (1502), Expect = e-163 Identities = 311/450 (69%), Positives = 358/450 (79%), Gaps = 18/450 (4%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRLSIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMELEDA 1135 VK+VTVADL+ESM+V+LSI AR Y LKMK KDTEFVS +DI+ET+++VFL ELEDA Sbjct: 1254 VKKVTVADLIESMEVQLSIHQ---ARIYKLKMKLKDTEFVSLRDIQETLKTVFLRELEDA 1310 Query: 1134 IENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGA-GTEVXXXXXXXXXXXXXXXXXXD 958 IENHVIFLSRVSGIK+FMSS+RSE S+EA EDD G E D Sbjct: 1311 IENHVIFLSRVSGIKNFMSSSRSEESNEAYEDDSGPRAQEEIDDDDADDDYDKGDDLGSD 1370 Query: 957 AQKRKQQASDEMDYDDGSEVDHGEDE---KRKGDVEDLEDMETSKDEGTEHSNDNDQTPD 787 QKRKQQASDEMDY+D S+VD GEDE K K D + LED++T KDE T+ +D D + Sbjct: 1371 VQKRKQQASDEMDYEDESDVDPGEDEGLGKGKSDGDHLEDIDTRKDEETDDFDDKDDASN 1430 Query: 786 EQNADEVMSEAKSV----RTLTSG------KGFSSKKIRRAVSVAFKGFTFEVLLRFTTE 637 QN DEVM+EAKS R ++ G + S KKIRRA+ + KG +FEV FT+E Sbjct: 1431 VQNVDEVMAEAKSSGKKDRAISKGIDKSIEELLSDKKIRRAIYMEVKGLSFEVHFTFTSE 1490 Query: 636 PHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGE----KAGTD 469 PHVLLAQIAQKTAKKV+IKRTGK++QC++VQYDPDEKTVIWD+KKKPK+G+ +A + Sbjct: 1491 PHVLLAQIAQKTAKKVFIKRTGKISQCKVVQYDPDEKTVIWDNKKKPKKGDAEKQQADGE 1550 Query: 468 DALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDI 289 D+ YWA+KASG DFKS+WEM DDLDLSRLYSNN+HA+L TYGVEAARATLIREV QVFDI Sbjct: 1551 DSAYWAVKASGEDFKSIWEMQDDLDLSRLYSNNIHAMLKTYGVEAARATLIREVTQVFDI 1610 Query: 288 YGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLT 109 YGVKIDYRHLSLIADYMTHTGGY PMSRHGSISESLSPFLKMSFETA+KFIVEA+SH LT Sbjct: 1611 YGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAASHALT 1670 Query: 108 DNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 DNLETPSSRICLGLPVK+GTGCFDLMQ+LD Sbjct: 1671 DNLETPSSRICLGLPVKMGTGCFDLMQKLD 1700 >ref|XP_012834350.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Erythranthe guttatus] gi|604336035|gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Erythranthe guttata] Length = 1719 Score = 545 bits (1405), Expect = e-152 Identities = 282/450 (62%), Positives = 349/450 (77%), Gaps = 18/450 (4%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRLSIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMELEDA 1135 VK+V+VADL+E+M+V+LS++H AR Y LKM KDTEFVS +++ ET+++ FL ELEDA Sbjct: 1270 VKKVSVADLIENMEVQLSVNHKTAARVYKLKMTLKDTEFVSLENMHETLKTTFLGELEDA 1329 Query: 1134 IENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXXXXXXXXXDA 955 IENHV++LSR+SGIK+F S+ + ++S+EA+ED+ G GTE + Sbjct: 1330 IENHVLYLSRLSGIKNFASNPKPKSSNEADEDESGLGTENAGVNDDDDDDDDDKGDDLGS 1389 Query: 954 --QKRKQQASDEMDYDDGSEVDHGED-----EKRKGDVEDLEDMETSKDEGTEHSNDNDQ 796 QKRKQQA+D+MDY+DGS+ ED EK K DVE+LE+ ET KDE +EH++D D+ Sbjct: 1390 DVQKRKQQATDDMDYEDGSDGGAAEDDDSDLEKGKSDVENLEEDETGKDEESEHTDDKDE 1449 Query: 795 TPDEQNADEVMSEAKSVRTLTSGKGFSS----------KKIRRAVSVAFKGFTFEVLLRF 646 + QN DE +SE ++ S KG +S KKIRRA + KG FEV F Sbjct: 1450 ASNVQNEDEAISEGTK-SSVGSSKGKTSFDKSSVELKGKKIRRAFYMVVKGTKFEVHFEF 1508 Query: 645 TTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGE-KAGTD 469 EPH+L+AQ+AQKT+KKVYI+++GK++QC++V YDPDEKTVIWD+ KKPKRGE K+ + Sbjct: 1509 HEEPHMLIAQLAQKTSKKVYIRKSGKVSQCKMVSYDPDEKTVIWDNSKKPKRGESKSEEE 1568 Query: 468 DALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDI 289 D YWA+KASGVDFKS WEMHDDLDLSRLYSNN+HA+L TYGVEAARAT+IREVK VFDI Sbjct: 1569 DTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNIHAMLTTYGVEAARATIIREVKHVFDI 1628 Query: 288 YGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLT 109 YGVKIDYRHLSLIAD+MTHTG Y PMSRHGSISESLSPFLKMSFETA+KFIVEA+SHGLT Sbjct: 1629 YGVKIDYRHLSLIADHMTHTGSYLPMSRHGSISESLSPFLKMSFETASKFIVEAASHGLT 1688 Query: 108 DNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 D L+TPSSRICLGLPVK+GTG FD+MQ+LD Sbjct: 1689 DKLDTPSSRICLGLPVKMGTGSFDVMQQLD 1718 >ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana sylvestris] Length = 1681 Score = 459 bits (1180), Expect = e-126 Identities = 243/448 (54%), Positives = 315/448 (70%), Gaps = 16/448 (3%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMEL 1144 VK++TVAD++ESM+V L SI +H+V++ Y L +K K+ EFVS +D T++ VFL EL Sbjct: 1238 VKKITVADMIESMEVNLLPLSIYNHQVSQLYKLTVKLKEHEFVSSEDCDYTLKYVFLREL 1297 Query: 1143 EDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTE--VXXXXXXXXXXXXXXX 970 EDAIE+H+ LS+++GIK+F SS+ S AS E E+ E + Sbjct: 1298 EDAIESHLALLSKINGIKNFKSSSDSVASHETEENASSTRYEEHMLDDDDEAEDERTEED 1357 Query: 969 XXXDAQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLEDMETSKDEGTEHSNDNDQTP 790 DAQKRKQQ +DEMDYDDG E D + + +VED E + + + G + Sbjct: 1358 LSSDAQKRKQQTTDEMDYDDGPE-DEASEAETTAEVED-EKSDQAHEIGNRDEEETGDHG 1415 Query: 789 DEQNADEVMSEAKSVRTLTSG-----------KGFSSKKIRRAVSVAFKGFTFEVLLRFT 643 +E+ ++ SE +++T S + S K R+V +A +G FEV RF Sbjct: 1416 NEEQTSKLYSEESNIKTAKSKTKTTVQQKKKKETRSKKDSDRSVFIAVEGLHFEVHFRFV 1475 Query: 642 TEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGTDDA 463 EPH+LLAQ+AQKTAKKVYIK GK++QCR+V+YD E TV+WD+K+ + + D+ Sbjct: 1476 NEPHILLAQVAQKTAKKVYIKNAGKIDQCRMVKYDVSENTVMWDEKQTKNQSQDT---DS 1532 Query: 462 LYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYG 283 YWA+KA+GVDF + WEM DDLD++R+Y+NN+ ++LNTYGVEAARA +IREVK VF IYG Sbjct: 1533 AYWALKAAGVDFGTFWEMQDDLDVNRIYTNNIRSMLNTYGVEAARAAIIREVKTVFGIYG 1592 Query: 282 VKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLTDN 103 V+ID+RHLSLIADYMTHTGGY PMSRHGSISESLSPFLKMSFETA+KFIVEA+SHGLTDN Sbjct: 1593 VEIDFRHLSLIADYMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAASHGLTDN 1652 Query: 102 LETPSSRICLGLPVKVGTGCFDLMQRLD 19 LETPSSRICLGLPVK+GTGCFD+MQ+LD Sbjct: 1653 LETPSSRICLGLPVKMGTGCFDIMQKLD 1680 >ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana tomentosiformis] Length = 1938 Score = 456 bits (1173), Expect = e-125 Identities = 245/447 (54%), Positives = 314/447 (70%), Gaps = 15/447 (3%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMEL 1144 VK++TVAD++ESM+V L SI +H+V++ Y L +K K+ EFVS +D T++ VFL EL Sbjct: 1495 VKKITVADMIESMEVNLLPLSIYNHQVSQLYKLTVKLKEHEFVSSEDCDYTLKYVFLREL 1554 Query: 1143 EDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAG--TEVXXXXXXXXXXXXXXX 970 EDAIE+H+ LS+++GIK+F SS+ S AS E E+ E+ Sbjct: 1555 EDAIESHLALLSKINGIKNFKSSSDSVASHETEENASSTRHEEEMLDDDDEAEDERTEED 1614 Query: 969 XXXDAQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLEDMET------SKDEGTEHSN 808 DAQKRKQQ +DEMDYDDG E D + + +VED + +T ++E +H N Sbjct: 1615 LSSDAQKRKQQTTDEMDYDDGPE-DEASEAETTAEVEDEKSDQTHEIGNRDEEETGDHGN 1673 Query: 807 DNDQTP---DEQNADEVMSEAKSVRTLTSGKGFSSKKIR-RAVSVAFKGFTFEVLLRFTT 640 + + +E N S+ K+ K SKK R+V +A +G FEV RF Sbjct: 1674 EEQTSKLHSEESNIKTAKSKTKTTVQQKKKKETRSKKDSDRSVFIAVEGLHFEVHFRFVN 1733 Query: 639 EPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGTDDAL 460 EPH+LLAQ+AQKTAKKVYIK GK+ QCR+V+YD E TV+WD K+ + + D+ Sbjct: 1734 EPHILLAQVAQKTAKKVYIKNAGKIEQCRMVKYDVSENTVMWDVKQIKNQSQDT---DSA 1790 Query: 459 YWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGV 280 YWA+KA+GVDF + WEM DD+D++R+Y+NN+ ++LNTYGVEAARA +IREVK VF IYGV Sbjct: 1791 YWALKAAGVDFGTFWEMQDDIDVNRIYTNNIRSMLNTYGVEAARAAIIREVKTVFGIYGV 1850 Query: 279 KIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLTDNL 100 +ID+RHLSLIADYMTHTGGY PMSRHGSISESLSPFLKMSFETA+KFIVEA+SHGLTDNL Sbjct: 1851 EIDFRHLSLIADYMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAASHGLTDNL 1910 Query: 99 ETPSSRICLGLPVKVGTGCFDLMQRLD 19 ETPSSRICLGLPVK+GTGCFD+MQ+LD Sbjct: 1911 ETPSSRICLGLPVKMGTGCFDIMQKLD 1937 >gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea] Length = 1626 Score = 450 bits (1158), Expect = e-123 Identities = 243/448 (54%), Positives = 314/448 (70%), Gaps = 20/448 (4%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRLSIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMELEDA 1135 +K++T+ADL+ESMDV +S H KV R Y L+M+ KDTEFVS +D +T+++ FL ELEDA Sbjct: 1180 LKKITIADLIESMDVSISF-HPKVGRIYKLRMRLKDTEFVSLEDTYKTLKTSFLKELEDA 1238 Query: 1134 IENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXXXXXXXXXDA 955 +ENHV+FL +V+ I F S +R EA SE ED G + D+ Sbjct: 1239 LENHVVFLKKVAVINDFASHSRFEALSEGEEDKASDGAQEAEEEGDDDGGDSDAGEDLDS 1298 Query: 954 --QKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLEDMETSKDEGTEHSNDNDQTPDEQ 781 QKR+QQA D+MDY+D S+ + E+E+ ED + ++E E +D+ D++ Sbjct: 1299 DVQKRRQQARDDMDYEDASDSEQREEEEDLDKANAEEDDDDDENEWNEKCDDDHDDYDQR 1358 Query: 780 NADEVMSEA-------KSVRTLTSGK------GFSSKKIRRAVSVAFKGFTFEVLLRFTT 640 ++++ M E KSV +TS K + K+ RA+ + +G + EV +FT+ Sbjct: 1359 SSEKNMVEKPILKGRKKSVAAITSEKIDLSTMPSTGKRENRAIYMEIEGLSLEVHFKFTS 1418 Query: 639 EPHVLLAQIAQKTAKKVYIKRTG-KMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGT--- 472 EPHVLLAQ+ QKTAKKVY+K+TG K+NQC+LVQYDPDEKTVIWDD KK ++ K G Sbjct: 1419 EPHVLLAQVVQKTAKKVYVKKTGGKLNQCKLVQYDPDEKTVIWDDDKKKEKATKNGRKAD 1478 Query: 471 DDALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFD 292 DDA YWA+KASG D +S WEM D LDL+RLY NN+H++L TYGVEAA AT+IRE+K VFD Sbjct: 1479 DDAAYWAVKASGSDVESFWEMSDYLDLNRLYCNNIHSMLKTYGVEAASATIIREMKNVFD 1538 Query: 291 IYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGL 112 IYGVKIDYRHLSLI D+M H GGY PMSRHGSI +S+SPFLKMSFETA+KFIVEA+ +GL Sbjct: 1539 IYGVKIDYRHLSLIGDHMAHAGGYRPMSRHGSIPDSVSPFLKMSFETASKFIVEAAIYGL 1598 Query: 111 TDNLETPSSRICLGLPVKVGT-GCFDLM 31 D+LE+PSSRICLGLPV+VGT G FDLM Sbjct: 1599 RDDLESPSSRICLGLPVRVGTGGPFDLM 1626 >emb|CDP10074.1| unnamed protein product [Coffea canephora] Length = 1680 Score = 444 bits (1141), Expect = e-121 Identities = 250/458 (54%), Positives = 313/458 (68%), Gaps = 25/458 (5%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMEL 1144 VK++TVAD++ESM+V L S+ ++ + Y L M FK EF S +D KET+ FL EL Sbjct: 1222 VKKITVADIIESMEVHLLPLSVLNNGIGIIYKLMMTFKHHEFASSEDCKETLRHSFLREL 1281 Query: 1143 EDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGT------EVXXXXXXXXXXX 982 EDAI+NH++ LSR+SGIK+ MS+TRS+ + E +ED G + E Sbjct: 1282 EDAIQNHLVLLSRISGIKNIMSNTRSKGN-ETDEDASGVTSHEEGDDENDDGDGGKGNDD 1340 Query: 981 XXXXXXXDAQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLEDMETSKDEGTEHSNDN 802 DAQKRKQQA+DEMDY+D +E + D ++ D + ++ E EG E + + Sbjct: 1341 MAEDLGSDAQKRKQQATDEMDYEDITEDESTADHEQGKDGQSNDEGEIR--EGKEAMDVD 1398 Query: 801 DQTPDEQNAD-EVMSEAKS---------VRTLTSGKGFSSKKIRRAVSVAFKGFTFEVLL 652 D+ E D E MS+ KS + + K F K+ R + V +G FE Sbjct: 1399 DEHAIEMEHDNEEMSKPKSGNKNGKSTLKKRKKAEKKFVRKETDRNIFVEVEGQKFEAHF 1458 Query: 651 RFTTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKK-----KPKRG 487 FT EPH+LLAQIAQKTAK VYIK +GK+NQC++V++D E TVIWD KK K K+ Sbjct: 1459 GFTNEPHILLAQIAQKTAKHVYIKSSGKINQCKMVEHDVSENTVIWDAKKVDKKIKAKKQ 1518 Query: 486 EKAGTDDAL-YWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIRE 310 KA DD L YWA+KA+GVDF WEM DDLD +R+YSN++HA+L TYGVEAARAT+IRE Sbjct: 1519 MKANVDDLLPYWALKAAGVDFIPFWEMQDDLDTARIYSNSIHAMLETYGVEAARATIIRE 1578 Query: 309 VKQVFDIYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVE 130 V VF IYGV+IDYRHLSLIADYMTH+GGY PMSRHGSI+ESLSP KMSFETA KFIVE Sbjct: 1579 VTNVFGIYGVQIDYRHLSLIADYMTHSGGYRPMSRHGSIAESLSPLAKMSFETAGKFIVE 1638 Query: 129 ASSHGLTDNLETPSSRICLGLPVKVGTGCFDLMQRLDS 16 A+SHG+TDNLETPSSRICLGLPVK+GTGCFDLMQ+LD+ Sbjct: 1639 AASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQQLDT 1676 >ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum tuberosum] Length = 1675 Score = 444 bits (1141), Expect = e-121 Identities = 240/451 (53%), Positives = 318/451 (70%), Gaps = 19/451 (4%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMEL 1144 VK++TVAD++ESM+V+L SI +H+V++ Y L +K K +FVS +D + T++ VFL EL Sbjct: 1232 VKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDFVSSEDCEYTLKFVFLREL 1291 Query: 1143 EDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXXXXXXXX 964 EDAIE+H+ LS+++GI++F +S+ S S E E+ E Sbjct: 1292 EDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRHE-EEMLDDEDEDERTEDLS 1350 Query: 963 XDAQKRKQQASDEMDYDDGSEVDHGEDE-KRKGDVEDLEDMETSK-DEGTEHSNDN---- 802 DAQKRKQQ +DEMDYDD D EDE + ++ED + +T + D G E N Sbjct: 1351 SDAQKRKQQTTDEMDYDD----DENEDEAETTAEIEDEKSEQTDEIDNGDEEEIGNRGNE 1406 Query: 801 DQTPDEQNADEVMSEAKSVRTLTSGKGF----------SSKKIRRAVSVAFKGFTFEVLL 652 +Q Q+ ++ +S KS ++ T K S K R V V +G FEV Sbjct: 1407 EQMSKLQSTEDDISNTKSSKSKTKTKTTVKQNKKKERRSKKDSDRCVFVDVEGLHFEVHF 1466 Query: 651 RFTTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGT 472 RF EPH+LLAQ+AQKTAKKVYIK +GK++QCR+V+Y+ E TV+WD+ + ++ + + Sbjct: 1467 RFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEYQTKQQSQDS-- 1524 Query: 471 DDALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFD 292 D+ YWA+KA+GVDF + WEM DDLD++R+Y+NN+ A+LNTYGVEAARA+++REVK VF Sbjct: 1525 -DSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFG 1583 Query: 291 IYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGL 112 IYGV+ID+RHLSLIAD+MTHTGGY PMSRHGSISESLSPFLKMSFETA+KFIVEA++HGL Sbjct: 1584 IYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGL 1643 Query: 111 TDNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 TDNLETPSSRICLGLPVK+GTGCFD+MQ+LD Sbjct: 1644 TDNLETPSSRICLGLPVKMGTGCFDIMQKLD 1674 >ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Solanum lycopersicum] Length = 1677 Score = 443 bits (1140), Expect = e-121 Identities = 237/448 (52%), Positives = 313/448 (69%), Gaps = 16/448 (3%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMEL 1144 VK++TVAD++ESM+V+L SI +H+V++ Y L +K K +FVS +D + T++ VFL EL Sbjct: 1232 VKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDFVSSEDCEYTLKFVFLREL 1291 Query: 1143 EDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXXXXXXXX 964 EDAIE+H+ LS+++GI++F +S+ S S E E+ E Sbjct: 1292 EDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRREEEMLDDDDDDEDERTEDL 1351 Query: 963 XD-AQKRKQQASDEMDYDDGSEVDHGE--------DEK-RKGDVEDLEDMETSKDEGTEH 814 AQKRKQQ +DEMDYDD + E DEK + D D D E + D G E Sbjct: 1352 SSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNGDEEENGDRGNEE 1411 Query: 813 SNDNDQTPDEQNADEVMSEAKSVRTLTSGKGF---SSKKIRRAVSVAFKGFTFEVLLRFT 643 Q+ +E ++ S++K+ T+ K S K R V V +G FEV RF Sbjct: 1412 HTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFVDVEGLHFEVHFRFV 1471 Query: 642 TEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGTDDA 463 EPH+LLAQ+AQKTAKKVY+K +GK++QCR+V+Y+ E TV+WD+ + ++ + + D+ Sbjct: 1472 NEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDENQTKQQRQDS---DS 1528 Query: 462 LYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYG 283 YWA+KA+GVDF + WEM DDLD++R+Y+NN+ A+LNTYGVEAARA+++REVK VF IYG Sbjct: 1529 AYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYG 1588 Query: 282 VKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLTDN 103 V+ID+RHLSLIAD+MTHTGGY PMSRHGSISESLSPFLKMSFETA+KFIVEA++HGLTDN Sbjct: 1589 VEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDN 1648 Query: 102 LETPSSRICLGLPVKVGTGCFDLMQRLD 19 LETPSSRICLGLPVK+GTGCFD+MQ LD Sbjct: 1649 LETPSSRICLGLPVKMGTGCFDIMQELD 1676 >ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis vinifera] Length = 1691 Score = 385 bits (990), Expect = e-104 Identities = 212/448 (47%), Positives = 289/448 (64%), Gaps = 16/448 (3%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSP------KDIKETVES 1162 +K+VTVAD+ ESM+V + ++ H+ Y LKMK + P +D +ET+E+ Sbjct: 1245 LKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEA 1304 Query: 1161 VFLMELEDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXX 982 VF+ ELEDAI+NH++ LS++SGIK+F+ +RS AS E +ED G G Sbjct: 1305 VFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGED 1364 Query: 981 XXXXXXXD--AQKRKQQASDEMDYDDGS-EVDHGEDEKRKGD----VEDLEDMETSKDEG 823 AQKRKQQASDEMDY D E D GE + VED ++ +++ G Sbjct: 1365 DGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVG 1424 Query: 822 TEHSNDNDQTPDEQNADEVMSEAKSVRTLTSGKGFSSKKIRRAVSVAFKGFTFEVLLRFT 643 D D ++ +AK+ K RA+ V KG FEV RFT Sbjct: 1425 ISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFT 1484 Query: 642 TEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGTDDA 463 EPH+LLAQIAQK A KVYI+ +GK++ C+++ + D+ VI+ + KR G + Sbjct: 1485 NEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQ--VIYYGRDPKKRENIPGEEKK 1542 Query: 462 LYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYG 283 A++ +GVDF + W+M D+LD+ +YSNNVHA+LNT+GVEAARAT+I+EV VF+ YG Sbjct: 1543 KLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYG 1602 Query: 282 VKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLTDN 103 VK++ RHLSLIAD+MTH+GGY PM+RHG I+ES+SPF KM+FETA+KFIVEA+SHG+TDN Sbjct: 1603 VKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDN 1662 Query: 102 LETPSSRICLGLPVKVGTGCFDLMQRLD 19 LE+ S+RICLGLPVK+GTGCFDLMQ+++ Sbjct: 1663 LESASARICLGLPVKMGTGCFDLMQKIE 1690 >emb|CBI29879.3| unnamed protein product [Vitis vinifera] Length = 1669 Score = 385 bits (990), Expect = e-104 Identities = 212/448 (47%), Positives = 289/448 (64%), Gaps = 16/448 (3%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSP------KDIKETVES 1162 +K+VTVAD+ ESM+V + ++ H+ Y LKMK + P +D +ET+E+ Sbjct: 1223 LKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEA 1282 Query: 1161 VFLMELEDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXX 982 VF+ ELEDAI+NH++ LS++SGIK+F+ +RS AS E +ED G G Sbjct: 1283 VFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGED 1342 Query: 981 XXXXXXXD--AQKRKQQASDEMDYDDGS-EVDHGEDEKRKGD----VEDLEDMETSKDEG 823 AQKRKQQASDEMDY D E D GE + VED ++ +++ G Sbjct: 1343 DGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVG 1402 Query: 822 TEHSNDNDQTPDEQNADEVMSEAKSVRTLTSGKGFSSKKIRRAVSVAFKGFTFEVLLRFT 643 D D ++ +AK+ K RA+ V KG FEV RFT Sbjct: 1403 ISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFT 1462 Query: 642 TEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGTDDA 463 EPH+LLAQIAQK A KVYI+ +GK++ C+++ + D+ VI+ + KR G + Sbjct: 1463 NEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQ--VIYYGRDPKKRENIPGEEKK 1520 Query: 462 LYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYG 283 A++ +GVDF + W+M D+LD+ +YSNNVHA+LNT+GVEAARAT+I+EV VF+ YG Sbjct: 1521 KLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYG 1580 Query: 282 VKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLTDN 103 VK++ RHLSLIAD+MTH+GGY PM+RHG I+ES+SPF KM+FETA+KFIVEA+SHG+TDN Sbjct: 1581 VKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDN 1640 Query: 102 LETPSSRICLGLPVKVGTGCFDLMQRLD 19 LE+ S+RICLGLPVK+GTGCFDLMQ+++ Sbjct: 1641 LESASARICLGLPVKMGTGCFDLMQKIE 1668 >ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus communis] Length = 1686 Score = 370 bits (950), Expect = 1e-99 Identities = 221/464 (47%), Positives = 286/464 (61%), Gaps = 32/464 (6%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMK------FKDTEFVSPKDIKETVES 1162 +++VTVAD+VESM+V + +I V R Y LKMK + +S +D +ET+E Sbjct: 1224 LRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEV 1283 Query: 1161 VFLMELEDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPG--AGTEVXXXXXXXXX 988 VFL ELEDAI+NH+ LSR+SGIK F+ +RS AS EA+ED G + E Sbjct: 1284 VFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGDMSHREERDDDNDDDD 1343 Query: 987 XXXXXXXXXDAQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLEDMETSK-DEGTEHS 811 DAQKRK QA+DEMDYDDG E + E E + E + E + D TE S Sbjct: 1344 GERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESGFESEIDQGDNETEIS 1403 Query: 810 ND------NDQTPDEQNADEVMSEAKSVRTLTSGKGFSSKKIR--------------RAV 691 ND +T + + S+ K+ + + G+ KK + RA+ Sbjct: 1404 NDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAI 1463 Query: 690 SVAFKGFTFEVLLRFTTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWD 511 V + FEV +FT EPH+LLA+IAQKTAKKVYI+ GK+ QCR+ D E VI+ Sbjct: 1464 FVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVT--DCKESQVIYY 1521 Query: 510 DKKKPKRGEKAGTDDALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAA 331 K +R + A+ A+GVDF + W+M D LD+ +YSNN+HA+L TYGVEAA Sbjct: 1522 GKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAA 1581 Query: 330 RATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFET 151 R T+IRE+ VF YG+ + RHLSLIAD+MTHTGGY PMSR G I+ES+SPF KMSFET Sbjct: 1582 RETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFET 1641 Query: 150 AAKFIVEASSHGLTDNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 A+KFIVEA+ HG DNLETPS+RICLGLPVK+GTG FDLMQ+L+ Sbjct: 1642 ASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKLE 1685 >ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium raimondii] gi|763751831|gb|KJB19219.1| hypothetical protein B456_003G089300 [Gossypium raimondii] Length = 1674 Score = 363 bits (931), Expect = 2e-97 Identities = 208/453 (45%), Positives = 281/453 (62%), Gaps = 21/453 (4%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRLS---IDHHKVARFYNLKMKF-KDTEFVSPKDIKET-----VES 1162 +K++TVA+++ESM V ++ I + + Y LKM+ K ++ DI T +E Sbjct: 1225 MKKITVAEILESMGVSVTPFAIHNGDICSIYKLKMRLGKPGRYLKNSDITVTDCQHILEV 1284 Query: 1161 VFLMELEDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXX 982 VFL ELEDAI+NH++ LSR+SGIK+FM +R ASSE +ED P + + Sbjct: 1285 VFLRELEDAIQNHLVLLSRISGIKNFMPDSRPNASSETDEDVPESRSHETENDDDTDDEG 1344 Query: 981 XXXXXXXDAQKRKQQASDEMDYDDGSEVDHGEDEKRKG--DVEDLEDMETSKDEGTEHSN 808 DAQK+KQQA+DEMDY+DGSE + E G D+ + E E + Sbjct: 1345 RAEDLGLDAQKQKQQATDEMDYEDGSEEEQNEGASLAGLESENDMSEDENGTIENNVIGS 1404 Query: 807 DNDQ------TPDEQNADEVMSEAKSVRTLTSGKGFSSKKIR----RAVSVAFKGFTFEV 658 DN++ +P+ ++ ++ S + R K K IR RA+ A KG FEV Sbjct: 1405 DNEKDDIFHGSPNAEDGSKLKSREGNTRAEPKRKKMRGKFIRKETDRAIFSATKGLVFEV 1464 Query: 657 LLRFTTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKA 478 +F EPH+LLAQIA+KTAKKVYI+ GK++QCR+ ++ +D K+ K Sbjct: 1465 HFKFVNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKQRKSPSGK 1524 Query: 477 GTDDALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQV 298 AL+ A GVDF + W+M LD+ LYSNN+HA+LNTYGVEAAR T+I E+ V Sbjct: 1525 ANIPALHTA----GVDFGAFWKMEGHLDVRYLYSNNIHAMLNTYGVEAARETIISEISNV 1580 Query: 297 FDIYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSH 118 F YG+ ++ RHL+LIAD+MTH+G Y PMSR GSI+E +SPF KMSFETA+KFIV+A+ H Sbjct: 1581 FTSYGIGVNIRHLTLIADFMTHSGRYRPMSRLGSIAECISPFSKMSFETASKFIVDAAKH 1640 Query: 117 GLTDNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 GL DNLETPSSRICLGLPVK+GTG F LMQ ++ Sbjct: 1641 GLVDNLETPSSRICLGLPVKMGTGSFGLMQNVE 1673 >ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2 [Eucalyptus grandis] Length = 1669 Score = 360 bits (924), Expect = 2e-96 Identities = 195/445 (43%), Positives = 280/445 (62%), Gaps = 13/445 (2%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMEL 1144 +K++TVA+++ESM+V + ++++H+V Y LKMK K + S K +E +E V+L EL Sbjct: 1233 LKKITVAEMIESMEVAVVPFAVNNHQVCSIYKLKMKLKRPKVFSVKHCEEILEVVYLREL 1292 Query: 1143 EDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXXXXXXXX 964 EDAI+NH++ LS++SGIK+F SS E +S + T Sbjct: 1293 EDAIQNHLLLLSKISGIKNFTSSETDEDASGSASQHAEERTVDDDADDGDDDGNDNDDLG 1352 Query: 963 XDAQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLEDMETSKDEGTEHSNDNDQTPDE 784 D QKRK+QA+DEM+Y+DG E + E E G +E+ D+ + D Sbjct: 1353 FDGQKRKRQATDEMEYEDGYEEERNEPELSAG-------LESDGDQANDVDIGEDGDGPP 1405 Query: 783 QNADEVMSEAKSVRTLTSGKGFSSKKIR----------RAVSVAFKGFTFEVLLRFTTEP 634 A E++S +K+ ++ + K K R RA+ VA G FEV RFT EP Sbjct: 1406 GIAPEIVSPSKTKKSKKNAKSDDEGKKRVRTKVIKEFDRAIFVAANGLDFEVHFRFTNEP 1465 Query: 633 HVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGTDDALYW 454 HVLL QIAQK AKKVY++ +GK+ C+++ ++ +D K+ ++ E D Sbjct: 1466 HVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDPKRRQKIE--AKDKEAIP 1523 Query: 453 AMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKI 274 A+ +G DF ++W+M D LD+ +YSN++HA+L TYGVEAAR T+IREV+ VF YG+ + Sbjct: 1524 AINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETIIREVQNVFGSYGISV 1583 Query: 273 DYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLTDNLET 94 D RHL+LIAD+MTH GGY PM+R G I+ES+SPF KMSFETA+KFIV+A+ HG+ DNLET Sbjct: 1584 DMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKFIVDAAYHGVVDNLET 1643 Query: 93 PSSRICLGLPVKVGTGCFDLMQRLD 19 PS+RICLGLP+K+GTG FDL+Q+++ Sbjct: 1644 PSARICLGLPMKMGTGSFDLLQKIE 1668 >ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1 [Eucalyptus grandis] Length = 1669 Score = 360 bits (924), Expect = 2e-96 Identities = 195/445 (43%), Positives = 280/445 (62%), Gaps = 13/445 (2%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMEL 1144 +K++TVA+++ESM+V + ++++H+V Y LKMK K + S K +E +E V+L EL Sbjct: 1233 LKKITVAEMIESMEVAVVPFAVNNHQVCSIYKLKMKLKRPKVFSVKHCEEILEVVYLREL 1292 Query: 1143 EDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXXXXXXXX 964 EDAI+NH++ LS++SGIK+F SS E +S + T Sbjct: 1293 EDAIQNHLLLLSKISGIKNFTSSETDEDASGSASQHAEERTVDDDADDGDDDGNDNDDLG 1352 Query: 963 XDAQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLEDMETSKDEGTEHSNDNDQTPDE 784 D QKRK+QA+DEM+Y+DG E + E E G +E+ D+ + D Sbjct: 1353 FDGQKRKRQATDEMEYEDGYEEERNEPELSAG-------LESDGDQANDVDIGEDGDGPP 1405 Query: 783 QNADEVMSEAKSVRTLTSGKGFSSKKIR----------RAVSVAFKGFTFEVLLRFTTEP 634 A E++S +K+ ++ + K K R RA+ VA G FEV RFT EP Sbjct: 1406 GIAPEIVSPSKTKKSKKNAKSDDEGKKRVRTKVIKEFDRAIFVAANGLDFEVHFRFTNEP 1465 Query: 633 HVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGTDDALYW 454 HVLL QIAQK AKKVY++ +GK+ C+++ ++ +D K+ ++ E D Sbjct: 1466 HVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDPKRRQKIE--AKDKEAIP 1523 Query: 453 AMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKI 274 A+ +G DF ++W+M D LD+ +YSN++HA+L TYGVEAAR T+IREV+ VF YG+ + Sbjct: 1524 AINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETIIREVQNVFGSYGISV 1583 Query: 273 DYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLTDNLET 94 D RHL+LIAD+MTH GGY PM+R G I+ES+SPF KMSFETA+KFIV+A+ HG+ DNLET Sbjct: 1584 DMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKFIVDAAYHGVVDNLET 1643 Query: 93 PSSRICLGLPVKVGTGCFDLMQRLD 19 PS+RICLGLP+K+GTG FDL+Q+++ Sbjct: 1644 PSARICLGLPMKMGTGSFDLLQKIE 1668 >gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus grandis] Length = 1606 Score = 360 bits (924), Expect = 2e-96 Identities = 195/445 (43%), Positives = 280/445 (62%), Gaps = 13/445 (2%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRL---SIDHHKVARFYNLKMKFKDTEFVSPKDIKETVESVFLMEL 1144 +K++TVA+++ESM+V + ++++H+V Y LKMK K + S K +E +E V+L EL Sbjct: 1170 LKKITVAEMIESMEVAVVPFAVNNHQVCSIYKLKMKLKRPKVFSVKHCEEILEVVYLREL 1229 Query: 1143 EDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAGTEVXXXXXXXXXXXXXXXXX 964 EDAI+NH++ LS++SGIK+F SS E +S + T Sbjct: 1230 EDAIQNHLLLLSKISGIKNFTSSETDEDASGSASQHAEERTVDDDADDGDDDGNDNDDLG 1289 Query: 963 XDAQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLEDMETSKDEGTEHSNDNDQTPDE 784 D QKRK+QA+DEM+Y+DG E + E E G +E+ D+ + D Sbjct: 1290 FDGQKRKRQATDEMEYEDGYEEERNEPELSAG-------LESDGDQANDVDIGEDGDGPP 1342 Query: 783 QNADEVMSEAKSVRTLTSGKGFSSKKIR----------RAVSVAFKGFTFEVLLRFTTEP 634 A E++S +K+ ++ + K K R RA+ VA G FEV RFT EP Sbjct: 1343 GIAPEIVSPSKTKKSKKNAKSDDEGKKRVRTKVIKEFDRAIFVAANGLDFEVHFRFTNEP 1402 Query: 633 HVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDKKKPKRGEKAGTDDALYW 454 HVLL QIAQK AKKVY++ +GK+ C+++ ++ +D K+ ++ E D Sbjct: 1403 HVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDPKRRQKIE--AKDKEAIP 1460 Query: 453 AMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKI 274 A+ +G DF ++W+M D LD+ +YSN++HA+L TYGVEAAR T+IREV+ VF YG+ + Sbjct: 1461 AINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETIIREVQNVFGSYGISV 1520 Query: 273 DYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAAKFIVEASSHGLTDNLET 94 D RHL+LIAD+MTH GGY PM+R G I+ES+SPF KMSFETA+KFIV+A+ HG+ DNLET Sbjct: 1521 DMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKFIVDAAYHGVVDNLET 1580 Query: 93 PSSRICLGLPVKVGTGCFDLMQRLD 19 PS+RICLGLP+K+GTG FDL+Q+++ Sbjct: 1581 PSARICLGLPMKMGTGSFDLLQKIE 1605 >ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao] gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao] Length = 1397 Score = 357 bits (916), Expect = 1e-95 Identities = 204/462 (44%), Positives = 290/462 (62%), Gaps = 30/462 (6%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRLS---IDHHKVARFYNLKM------KFKDTEFVSPKDIKETVES 1162 +K++TVAD++ESM+V ++ +D+ + Y LKM K+ + ++ KD + ++ Sbjct: 943 MKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKV 1002 Query: 1161 VFLMELEDAIENHVIFLSRVSGIKHFMSSTRSEASSEANED-DPGAGTEVXXXXXXXXXX 985 VFL ELEDAI+NH++ LS++SGIK FM ++ AS+E +ED G E Sbjct: 1003 VFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDD 1062 Query: 984 XXXXXXXXD----AQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLE-DMETSKDE-- 826 D AQK+KQQ +DEMDY+D SEV+ E + LE +++ S+DE Sbjct: 1063 ADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEG----ASLAALESEIDMSEDETG 1118 Query: 825 -------GTEHSND--NDQTPDEQNADEVMSEAKSVRTLTSGKGFSSKKIR----RAVSV 685 G+++ D + +P+ +N S + + K +K +R RA+ Sbjct: 1119 TIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFN 1178 Query: 684 AFKGFTFEVLLRFTTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDK 505 A +G FEV + EPH+LLAQIA+KTAKKVYI+ GK++QCR+ ++ +D Sbjct: 1179 AIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDP 1238 Query: 504 KKPKRGEKAGTDDALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARA 325 KK K+ +D A+ +GVDF + W+M D +D+ LYSN++HA+LNTYGVEAAR Sbjct: 1239 KK----RKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARE 1294 Query: 324 TLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAA 145 T+IRE+ VF YG+ ++ RHL+LIAD+MTH+G Y PMSR G I+ES+SPF KMSFETA+ Sbjct: 1295 TIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETAS 1354 Query: 144 KFIVEASSHGLTDNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 KFIVEA+ HGL DNLETPSSRICLGLPVK+GTG FDLMQ+++ Sbjct: 1355 KFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVE 1396 >ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao] gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao] Length = 1400 Score = 357 bits (916), Expect = 1e-95 Identities = 204/462 (44%), Positives = 290/462 (62%), Gaps = 30/462 (6%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRLS---IDHHKVARFYNLKM------KFKDTEFVSPKDIKETVES 1162 +K++TVAD++ESM+V ++ +D+ + Y LKM K+ + ++ KD + ++ Sbjct: 946 MKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKV 1005 Query: 1161 VFLMELEDAIENHVIFLSRVSGIKHFMSSTRSEASSEANED-DPGAGTEVXXXXXXXXXX 985 VFL ELEDAI+NH++ LS++SGIK FM ++ AS+E +ED G E Sbjct: 1006 VFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDD 1065 Query: 984 XXXXXXXXD----AQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLE-DMETSKDE-- 826 D AQK+KQQ +DEMDY+D SEV+ E + LE +++ S+DE Sbjct: 1066 ADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEG----ASLAALESEIDMSEDETG 1121 Query: 825 -------GTEHSND--NDQTPDEQNADEVMSEAKSVRTLTSGKGFSSKKIR----RAVSV 685 G+++ D + +P+ +N S + + K +K +R RA+ Sbjct: 1122 TIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFN 1181 Query: 684 AFKGFTFEVLLRFTTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDK 505 A +G FEV + EPH+LLAQIA+KTAKKVYI+ GK++QCR+ ++ +D Sbjct: 1182 AIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDP 1241 Query: 504 KKPKRGEKAGTDDALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARA 325 KK K+ +D A+ +GVDF + W+M D +D+ LYSN++HA+LNTYGVEAAR Sbjct: 1242 KK----RKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARE 1297 Query: 324 TLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAA 145 T+IRE+ VF YG+ ++ RHL+LIAD+MTH+G Y PMSR G I+ES+SPF KMSFETA+ Sbjct: 1298 TIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETAS 1357 Query: 144 KFIVEASSHGLTDNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 KFIVEA+ HGL DNLETPSSRICLGLPVK+GTG FDLMQ+++ Sbjct: 1358 KFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVE 1399 >ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao] gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao] Length = 1689 Score = 357 bits (916), Expect = 1e-95 Identities = 204/462 (44%), Positives = 290/462 (62%), Gaps = 30/462 (6%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRLS---IDHHKVARFYNLKM------KFKDTEFVSPKDIKETVES 1162 +K++TVAD++ESM+V ++ +D+ + Y LKM K+ + ++ KD + ++ Sbjct: 1235 MKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKV 1294 Query: 1161 VFLMELEDAIENHVIFLSRVSGIKHFMSSTRSEASSEANED-DPGAGTEVXXXXXXXXXX 985 VFL ELEDAI+NH++ LS++SGIK FM ++ AS+E +ED G E Sbjct: 1295 VFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDD 1354 Query: 984 XXXXXXXXD----AQKRKQQASDEMDYDDGSEVDHGEDEKRKGDVEDLE-DMETSKDE-- 826 D AQK+KQQ +DEMDY+D SEV+ E + LE +++ S+DE Sbjct: 1355 ADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEG----ASLAALESEIDMSEDETG 1410 Query: 825 -------GTEHSND--NDQTPDEQNADEVMSEAKSVRTLTSGKGFSSKKIR----RAVSV 685 G+++ D + +P+ +N S + + K +K +R RA+ Sbjct: 1411 TIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFN 1470 Query: 684 AFKGFTFEVLLRFTTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDK 505 A +G FEV + EPH+LLAQIA+KTAKKVYI+ GK++QCR+ ++ +D Sbjct: 1471 AIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDP 1530 Query: 504 KKPKRGEKAGTDDALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARA 325 KK K+ +D A+ +GVDF + W+M D +D+ LYSN++HA+LNTYGVEAAR Sbjct: 1531 KK----RKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARE 1586 Query: 324 TLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAA 145 T+IRE+ VF YG+ ++ RHL+LIAD+MTH+G Y PMSR G I+ES+SPF KMSFETA+ Sbjct: 1587 TIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETAS 1646 Query: 144 KFIVEASSHGLTDNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 KFIVEA+ HGL DNLETPSSRICLGLPVK+GTG FDLMQ+++ Sbjct: 1647 KFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVE 1688 >ref|XP_008392178.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit rpa1-like [Malus domestica] Length = 1682 Score = 356 bits (914), Expect = 2e-95 Identities = 204/462 (44%), Positives = 290/462 (62%), Gaps = 30/462 (6%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRLS---IDHHKVARFYNLKMKFKDTEFVS------PKDIKETVES 1162 +K++TVAD++ESM+V L + + R Y L+MK E + +D +E +E Sbjct: 1223 LKKITVADIIESMEVTLLPFVLQGLETCRIYKLQMKLHIPEHLQNIIQDISEDWEEILEV 1282 Query: 1161 VFLMELEDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAG---TEVXXXXXXXX 991 +F+ LEDAI++HV+ LS++SGIK+ ++ +AS+E +E+ +G E Sbjct: 1283 MFVRALEDAIQSHVLLLSKISGIKN-VTDAPQKASNEMDENISKSGHQHQEEDDDNDGAD 1341 Query: 990 XXXXXXXXXXDAQKRKQQASDEMDYDDGSE-------VDHGEDEKRKGDVEDLEDMETSK 832 DAQKRK QA DEMDY+DG E + G++ + D ++ D+ET K Sbjct: 1342 DGEGAEDFGMDAQKRKLQAFDEMDYEDGCEDEVRDGDLTDGDEVENDADNDEENDVETGK 1401 Query: 831 DEGTEHSNDNDQTPDE--QNADEVMSEAKSVRTLTSGKGFSSKKIR---------RAVSV 685 D E + D+ P + A +++ + SG KKIR R++ V Sbjct: 1402 DGAIEVVDATDEMPANPLEEAGDLLKTKSKEKKNKSGATIKKKKIRAQLVRKDTDRSIFV 1461 Query: 684 AFKGFTFEVLLRFTTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDK 505 + KGF FEV +FT EPH+LLAQIAQ+TA+KV ++R+G ++ C+ Q DE V+ K Sbjct: 1462 SAKGFHFEVHFKFTDEPHILLAQIAQQTAQKVCMQRSGSVDDCK--QITCDENQVLLYGK 1519 Query: 504 KKPKRGEKAGTDDALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARA 325 + + + A++ +GVDF++ W++ D LD+ LYSNN+HA+LNTYGVEAAR Sbjct: 1520 DPENKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYLYSNNIHAMLNTYGVEAARE 1579 Query: 324 TLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAA 145 T+IRE+ VF YG+ ++ RHL+LIADYMTH+GGY PM+R G I+ES+SPF KMSFETA+ Sbjct: 1580 TIIREIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRFGGIAESISPFNKMSFETAS 1639 Query: 144 KFIVEASSHGLTDNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 KFIVEA+ HG TD+LETPSSRICLGLPVKVGTGCFDLMQ+++ Sbjct: 1640 KFIVEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKIE 1681 >ref|XP_009345036.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2 [Pyrus x bretschneideri] Length = 1373 Score = 354 bits (909), Expect = 8e-95 Identities = 203/462 (43%), Positives = 288/462 (62%), Gaps = 30/462 (6%) Frame = -2 Query: 1314 VKRVTVADLVESMDVRLS---IDHHKVARFYNLKMKFKDTEFVS------PKDIKETVES 1162 +K++TVAD++ESM+V L + + R Y L+MK E + +D +E +E Sbjct: 914 LKKITVADIIESMEVTLLPFVLQGLETCRIYKLQMKLHIPEHLQNIVQDISEDWEEILEV 973 Query: 1161 VFLMELEDAIENHVIFLSRVSGIKHFMSSTRSEASSEANEDDPGAG---TEVXXXXXXXX 991 +F+ LEDAI++HV+ LS++SGIK+ ++ +AS+E +E+ +G E Sbjct: 974 MFVRALEDAIQSHVLLLSKISGIKN-VTDAPQKASNETDENISKSGHQHQEEDDDNDGAD 1032 Query: 990 XXXXXXXXXXDAQKRKQQASDEMDYDDGSE-------VDHGEDEKRKGDVEDLEDMETSK 832 DAQKRK QA DEMDY+DG E + G++ + D ++ D+ET K Sbjct: 1033 DGEGAEDFGMDAQKRKLQAFDEMDYEDGCEDEVRDGDLTDGDEVENDADNDEENDVETGK 1092 Query: 831 DEGTEHSNDNDQTPDE--QNADEVMSEAKSVRTLTSGKGFSSKKIR---------RAVSV 685 D E + D+ P + A + + SG KKIR R++ V Sbjct: 1093 DGAIEVVDATDEMPTSPLEEAGNLPKPKSKEKKNKSGATIKKKKIRAQLVRKDTDRSIFV 1152 Query: 684 AFKGFTFEVLLRFTTEPHVLLAQIAQKTAKKVYIKRTGKMNQCRLVQYDPDEKTVIWDDK 505 + KGF FE+ +FT EPH+LLAQIAQ+TA+KV ++R+G ++ C+ Q DE V+ K Sbjct: 1153 SAKGFHFEIHFKFTDEPHILLAQIAQQTAQKVSMQRSGSVDDCK--QITCDENQVLLYGK 1210 Query: 504 KKPKRGEKAGTDDALYWAMKASGVDFKSVWEMHDDLDLSRLYSNNVHAVLNTYGVEAARA 325 + + + A++ +GVDF++ W++ D LD+ LYSNN+HA+LNTYGVEAAR Sbjct: 1211 DPENKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYLYSNNIHAMLNTYGVEAARE 1270 Query: 324 TLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYTPMSRHGSISESLSPFLKMSFETAA 145 T+IRE+ VF YG+ ++ RHL+LIADYMTH+GGY PM+R G I+ES+SPF KMSFETA+ Sbjct: 1271 TIIREIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRFGGIAESISPFNKMSFETAS 1330 Query: 144 KFIVEASSHGLTDNLETPSSRICLGLPVKVGTGCFDLMQRLD 19 KFIVEA+ HG TD+LETPSSRICLGLPVKVGTGCFDLMQ+++ Sbjct: 1331 KFIVEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKIE 1372