BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00021597
         (1994 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012842923.1| PREDICTED: pre-mRNA-processing protein 40C [...   328   1e-86
ref|XP_011073766.1| PREDICTED: pre-mRNA-processing protein 40C [...   275   9e-71
ref|XP_010654542.1| PREDICTED: pre-mRNA-processing protein 40C i...   251   1e-63
ref|XP_010654535.1| PREDICTED: pre-mRNA-processing protein 40C i...   251   1e-63
ref|XP_010654529.1| PREDICTED: pre-mRNA-processing protein 40C i...   251   1e-63
ref|XP_002272014.2| PREDICTED: pre-mRNA-processing protein 40C i...   251   1e-63
gb|KDO53044.1| hypothetical protein CISIN_1g002026mg [Citrus sin...   244   2e-61
gb|KDO53043.1| hypothetical protein CISIN_1g002026mg [Citrus sin...   244   2e-61
ref|XP_006484634.1| PREDICTED: pre-mRNA-processing protein 40C-l...   244   2e-61
ref|XP_006437488.1| hypothetical protein CICLE_v10030612mg [Citr...   244   2e-61
ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative ...   244   3e-61
ref|XP_011013692.1| PREDICTED: pre-mRNA-processing protein 40C i...   243   6e-61
ref|XP_011013685.1| PREDICTED: pre-mRNA-processing protein 40C i...   243   6e-61
ref|XP_011013679.1| PREDICTED: pre-mRNA-processing protein 40C i...   243   6e-61
ref|XP_010250283.1| PREDICTED: pre-mRNA-processing protein 40C i...   241   2e-60
ref|XP_010250268.1| PREDICTED: pre-mRNA-processing protein 40C i...   241   2e-60
gb|KJB15270.1| hypothetical protein B456_002G167700 [Gossypium r...   241   2e-60
gb|KJB15269.1| hypothetical protein B456_002G167700 [Gossypium r...   241   2e-60
gb|KJB15268.1| hypothetical protein B456_002G167700 [Gossypium r...   241   2e-60
ref|XP_012467146.1| PREDICTED: pre-mRNA-processing protein 40C [...   241   2e-60

>ref|XP_012842923.1| PREDICTED: pre-mRNA-processing protein 40C [Erythranthe guttatus]
            gi|604322248|gb|EYU32634.1| hypothetical protein
            MIMGU_mgv1a001237mg [Erythranthe guttata]
          Length = 858

 Score =  328 bits (841), Expect = 1e-86
 Identities = 195/349 (55%), Positives = 222/349 (63%), Gaps = 5/349 (1%)
 Frame = -2

Query: 1798 FSSGSAVQVMAHPGPPFVVPEGNSSHAGNYSFNANLLPNQTNQSQTTDVRADGSQEVGAI 1619
            F++GSAVQ M          EGNS H+ N+SFN N+   Q +Q   T+VR DG+QE GAI
Sbjct: 7    FATGSAVQAM----------EGNSLHSANFSFNGNVQSAQADQPNRTNVRGDGTQETGAI 56

Query: 1618 TSAPAAMQSVS-QP-RPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPG 1445
            TS+PA MQS S QP RPN+SP+ THFASN F+N T+WMP  AP TF +P  + K P TPG
Sbjct: 57   TSSPAFMQSSSSQPARPNSSPSTTHFASNKFSN-TTWMPT-AP-TFQVPTGILKTP-TPG 112

Query: 1444 PAGLVSFVHSPSTSTIQTSSHDSTAL-RTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXX 1268
            P GL S   SPS         DS AL R FM   P L NP IQHN               
Sbjct: 113  PPGLTSSAPSPSNL-------DSGALIRPFMHTGPFLSNPSIQHNAAPPGPWFRP----- 160

Query: 1267 XXXXXPHHIGGFARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPA-IGA 1091
                    IG F RP FSPYAAV+PGP+PMP R T P SVS+PDIQPPGVS +  A I  
Sbjct: 161  ------QQIGAFGRPPFSPYAAVIPGPYPMPTRGTQPVSVSFPDIQPPGVSHAASASISG 214

Query: 1090 PTTSFTAXXXXXXXXXQAELPPGIDNREHVVNA-ETKDEAPSKEQLEAWTAHRTETGIVY 914
            PT                ELPPG DN +H  NA  TKDEAP+KE L+AWTAHR ETG +Y
Sbjct: 215  PT----------------ELPPGTDNSKHGGNAVTTKDEAPTKE-LDAWTAHRAETGTIY 257

Query: 913  YYNALTGQSTYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            YYNALTG+STYEKPSGFKGES++ T+QPT ISWEKL GTDWT VTTNDG
Sbjct: 258  YYNALTGESTYEKPSGFKGESNKPTMQPTPISWEKLIGTDWTTVTTNDG 306



 Score =  246 bits (627), Expect = 7e-62
 Identities = 138/243 (56%), Positives = 157/243 (64%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQDSG+PDS+S  P++S     E+NGS  +E 
Sbjct: 367  NTGGRDATAVKSSSVSGSSSALDLIKKKLQDSGLPDSTSPGPSLS-----EINGSKSIEF 421

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECILQFKEMLKERGVAPFSKWEKE 384
                                           GPTKEECILQFKEMLKERGVAPFSKWEKE
Sbjct: 422  LENENNKDKRKDANGDGDLSNSSSDSEDEDGGPTKEECILQFKEMLKERGVAPFSKWEKE 481

Query: 383  LPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEAKEDI 204
            LPKIVFD RFKAI N SARRALFEHYVRT                 EGFKQ+LEEAKEDI
Sbjct: 482  LPKIVFDARFKAISNHSARRALFEHYVRTRAEEERKEKRAAQKAASEGFKQLLEEAKEDI 541

Query: 203  DHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSNFKQI 24
            DHNTDY+TFKR+WG+D RFQAL+RK+RE LLNERV  L++ AQE+A AERA   S+FK +
Sbjct: 542  DHNTDYETFKRKWGQDHRFQALERKEREFLLNERVSPLRKIAQERAQAERAAATSDFKSM 601

Query: 23   LEE 15
            L++
Sbjct: 602  LKD 604


>ref|XP_011073766.1| PREDICTED: pre-mRNA-processing protein 40C [Sesamum indicum]
          Length = 758

 Score =  275 bits (704), Expect = 9e-71
 Identities = 148/226 (65%), Positives = 162/226 (71%), Gaps = 4/226 (1%)
 Frame = -1

Query: 680 LDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEATYKSL----QXXXXXXXXXXX 513
           LDLIKKKLQDSG+PDSSS  P++S ++A E+NGS  +EA+ K L                
Sbjct: 278 LDLIKKKLQDSGMPDSSSPGPSLSSAVALELNGSKPMEASIKGLLNENNKEKRKDANTDG 337

Query: 512 XXXXXXXXXXXXXXGPTKEECILQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPNQS 333
                         GPTKEECILQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPN S
Sbjct: 338 DISNSSSDSEDEDGGPTKEECILQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPNHS 397

Query: 332 ARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEAKEDIDHNTDYQTFKRRWGEDP 153
           ARRALFEHYVRT                 EGFKQ+LEEAKEDIDHNTDYQTFKRRWGEDP
Sbjct: 398 ARRALFEHYVRTRAEEERKEKRAAQKAALEGFKQLLEEAKEDIDHNTDYQTFKRRWGEDP 457

Query: 152 RFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSNFKQILEE 15
           RFQALDRK+RE LLNERVL LKR+AQEKA AER   +SNFK +L +
Sbjct: 458 RFQALDRKEREALLNERVLPLKRTAQEKAQAERVAAISNFKSMLHD 503



 Score =  268 bits (686), Expect = 1e-68
 Identities = 130/197 (65%), Positives = 146/197 (74%)
 Frame = -2

Query: 1357 MPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPHHIGGFARPSFSPYAAVVPGPFPM 1178
            MPAAP+L NP  QHN                    P  I  FARP FSP+AAV+PGP+P 
Sbjct: 1    MPAAPILSNPSTQHNVISMYPSPSPHAAPPGPWLQPQQISAFARPPFSPFAAVIPGPYPT 60

Query: 1177 PIRSTPPQSVSYPDIQPPGVSPSVPAIGAPTTSFTAXXXXXXXXXQAELPPGIDNREHVV 998
            P R TPP SV+ PDIQPPGVSP+V A+GAPT+S TA          AELPPG++N ++V 
Sbjct: 61   PTRGTPPVSVALPDIQPPGVSPAVSAVGAPTSSSTAGGQPAIGFGLAELPPGVENNKYVG 120

Query: 997  NAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQSTYEKPSGFKGESDRATVQPTSIS 818
            NAETKDEAP KEQL+AWTAHRTETG VYYYNALTG+STYEKP GFKGESD+ATVQPT IS
Sbjct: 121  NAETKDEAPIKEQLDAWTAHRTETGTVYYYNALTGESTYEKPPGFKGESDKATVQPTPIS 180

Query: 817  WEKLSGTDWTLVTTNDG 767
            WEKL+GTDWTLVTTNDG
Sbjct: 181  WEKLTGTDWTLVTTNDG 197


>ref|XP_010654542.1| PREDICTED: pre-mRNA-processing protein 40C isoform X4 [Vitis
            vinifera]
          Length = 848

 Score =  251 bits (642), Expect = 1e-63
 Identities = 141/245 (57%), Positives = 161/245 (65%), Gaps = 4/245 (1%)
 Frame = -1

Query: 737  GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEATY 558
            GGRD              ALD+IKKKLQDSG P +SS   + SG IASE+NGS ++E T 
Sbjct: 350  GGRDATPLRTSAVPGSASALDMIKKKLQDSGAPATSSPVHS-SGPIASELNGSRVIEPTV 408

Query: 557  KSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSKWE 390
            K LQ                              PTKEECI+QFKEMLKERGVAPFSKWE
Sbjct: 409  KGLQSENSKDKLKDTNGDGNMSDSSSDSEDVDSGPTKEECIIQFKEMLKERGVAPFSKWE 468

Query: 389  KELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEAKE 210
            KELPKIVFDPRFKAIP  SARR+LFEHYVRT                 EGFKQ+LEEA E
Sbjct: 469  KELPKIVFDPRFKAIPGYSARRSLFEHYVRTRAEEERKEKRAAQRAAIEGFKQLLEEASE 528

Query: 209  DIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSNFK 30
            DIDH T+YQTF+++WG+DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA  VS+FK
Sbjct: 529  DIDHKTEYQTFRKKWGDDPRFEALDRKDRELLLNERVLPLKRAAEEKAQAIRAAAVSSFK 588

Query: 29   QILEE 15
             +L +
Sbjct: 589  SMLRD 593



 Score =  225 bits (573), Expect = 1e-55
 Identities = 130/291 (44%), Positives = 162/291 (55%), Gaps = 6/291 (2%)
 Frame = -2

Query: 1621 ITSAPAAMQSVSQPRPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGP 1442
            ++SA    QSV  P P +S   +  +S      T WMP  +  +F +P+ M   P TPGP
Sbjct: 1    MSSASHVSQSV--PFPCSSSTMSVSSSPKMGPTTLWMP--SNPSFPVPSGMPVTPGTPGP 56

Query: 1441 AGLVSFVHSPSTSTIQTSSHD---STALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXX 1271
             G+       S   + ++S D   S   R   PAAPV  NP IQ                
Sbjct: 57   PGIAPSTPLSSNLAVPSASMDFSSSVVSRAIFPAAPVSSNPAIQQQIYPSYSSLPATNAS 116

Query: 1270 XXXXXXPH-HIGGFARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIG 1094
                      +GG  RP F PY AV P PFP+P    P  SV  PD QPPGV+P   A G
Sbjct: 117  SQGPWLQPPQMGGLPRPPFVPYPAVYPTPFPLPAHGMPLPSVPLPDSQPPGVTPVGTAGG 176

Query: 1093 AP-TTSFTAXXXXXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGI 920
             P + + +           +ELPP GID+ +HV  A TKD A   EQ++AWTAH+T+TG+
Sbjct: 177  TPISAAVSGHHLANTSGMLSELPPPGIDDNKHVNGAGTKDGAAVNEQVDAWTAHKTDTGV 236

Query: 919  VYYYNALTGQSTYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            VYYYNALTG+STYEKPS FKGE+D+ TVQPT +SWEKL+GTDW LVTTNDG
Sbjct: 237  VYYYNALTGESTYEKPSDFKGEADKVTVQPTPVSWEKLTGTDWALVTTNDG 287


>ref|XP_010654535.1| PREDICTED: pre-mRNA-processing protein 40C isoform X3 [Vitis
            vinifera]
          Length = 903

 Score =  251 bits (642), Expect = 1e-63
 Identities = 141/245 (57%), Positives = 161/245 (65%), Gaps = 4/245 (1%)
 Frame = -1

Query: 737  GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEATY 558
            GGRD              ALD+IKKKLQDSG P +SS   + SG IASE+NGS ++E T 
Sbjct: 405  GGRDATPLRTSAVPGSASALDMIKKKLQDSGAPATSSPVHS-SGPIASELNGSRVIEPTV 463

Query: 557  KSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSKWE 390
            K LQ                              PTKEECI+QFKEMLKERGVAPFSKWE
Sbjct: 464  KGLQSENSKDKLKDTNGDGNMSDSSSDSEDVDSGPTKEECIIQFKEMLKERGVAPFSKWE 523

Query: 389  KELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEAKE 210
            KELPKIVFDPRFKAIP  SARR+LFEHYVRT                 EGFKQ+LEEA E
Sbjct: 524  KELPKIVFDPRFKAIPGYSARRSLFEHYVRTRAEEERKEKRAAQRAAIEGFKQLLEEASE 583

Query: 209  DIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSNFK 30
            DIDH T+YQTF+++WG+DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA  VS+FK
Sbjct: 584  DIDHKTEYQTFRKKWGDDPRFEALDRKDRELLLNERVLPLKRAAEEKAQAIRAAAVSSFK 643

Query: 29   QILEE 15
             +L +
Sbjct: 644  SMLRD 648



 Score =  246 bits (628), Expect = 6e-62
 Identities = 143/331 (43%), Positives = 184/331 (55%), Gaps = 6/331 (1%)
 Frame = -2

Query: 1741 PEGNSSHAGNYSFNANLLPNQTNQSQTTDVRADGSQEVGAITSAPAAMQSVSQPRPNASP 1562
            P G + +A ++SFN N    Q +Q+  +D     +QE G+++SA    QSV  P P +S 
Sbjct: 16   PRGPTPNAASFSFNGNPQLVQKDQTLKSDNSGAVAQEAGSMSSASHVSQSV--PFPCSSS 73

Query: 1561 AATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVSFVHSPSTSTIQTSSH 1382
              +  +S      T WMP  +  +F +P+ M   P TPGP G+       S   + ++S 
Sbjct: 74   TMSVSSSPKMGPTTLWMP--SNPSFPVPSGMPVTPGTPGPPGIAPSTPLSSNLAVPSASM 131

Query: 1381 D---STALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPH-HIGGFARPSFS 1214
            D   S   R   PAAPV  NP IQ                          +GG  RP F 
Sbjct: 132  DFSSSVVSRAIFPAAPVSSNPAIQQQIYPSYSSLPATNASSQGPWLQPPQMGGLPRPPFV 191

Query: 1213 PYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGAP-TTSFTAXXXXXXXXXQA 1037
            PY AV P PFP+P    P  SV  PD QPPGV+P   A G P + + +           +
Sbjct: 192  PYPAVYPTPFPLPAHGMPLPSVPLPDSQPPGVTPVGTAGGTPISAAVSGHHLANTSGMLS 251

Query: 1036 ELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQSTYEKPSGFK 860
            ELPP GID+ +HV  A TKD A   EQ++AWTAH+T+TG+VYYYNALTG+STYEKPS FK
Sbjct: 252  ELPPPGIDDNKHVNGAGTKDGAAVNEQVDAWTAHKTDTGVVYYYNALTGESTYEKPSDFK 311

Query: 859  GESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            GE+D+ TVQPT +SWEKL+GTDW LVTTNDG
Sbjct: 312  GEADKVTVQPTPVSWEKLTGTDWALVTTNDG 342


>ref|XP_010654529.1| PREDICTED: pre-mRNA-processing protein 40C isoform X2 [Vitis
            vinifera]
          Length = 1013

 Score =  251 bits (642), Expect = 1e-63
 Identities = 141/245 (57%), Positives = 161/245 (65%), Gaps = 4/245 (1%)
 Frame = -1

Query: 737  GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEATY 558
            GGRD              ALD+IKKKLQDSG P +SS   + SG IASE+NGS ++E T 
Sbjct: 515  GGRDATPLRTSAVPGSASALDMIKKKLQDSGAPATSSPVHS-SGPIASELNGSRVIEPTV 573

Query: 557  KSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSKWE 390
            K LQ                              PTKEECI+QFKEMLKERGVAPFSKWE
Sbjct: 574  KGLQSENSKDKLKDTNGDGNMSDSSSDSEDVDSGPTKEECIIQFKEMLKERGVAPFSKWE 633

Query: 389  KELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEAKE 210
            KELPKIVFDPRFKAIP  SARR+LFEHYVRT                 EGFKQ+LEEA E
Sbjct: 634  KELPKIVFDPRFKAIPGYSARRSLFEHYVRTRAEEERKEKRAAQRAAIEGFKQLLEEASE 693

Query: 209  DIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSNFK 30
            DIDH T+YQTF+++WG+DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA  VS+FK
Sbjct: 694  DIDHKTEYQTFRKKWGDDPRFEALDRKDRELLLNERVLPLKRAAEEKAQAIRAAAVSSFK 753

Query: 29   QILEE 15
             +L +
Sbjct: 754  SMLRD 758



 Score =  238 bits (606), Expect = 2e-59
 Identities = 145/337 (43%), Positives = 185/337 (54%), Gaps = 11/337 (3%)
 Frame = -2

Query: 1744 VPEGNSSHAGNYSFN-----ANLLPNQTNQSQTTDVRADGSQEVGAITSAPAAMQSVSQP 1580
            VP  +SS   ++S+N     A    +Q  QS +TD     +QE G+++SA    QSV  P
Sbjct: 121  VPGPSSSSGPSFSYNIAHKGAGFPGSQPFQS-STDNSGAVAQEAGSMSSASHVSQSV--P 177

Query: 1579 RPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVSFVHSPSTST 1400
             P +S   +  +S      T WMP  +  +F +P+ M   P TPGP G+       S   
Sbjct: 178  FPCSSSTMSVSSSPKMGPTTLWMP--SNPSFPVPSGMPVTPGTPGPPGIAPSTPLSSNLA 235

Query: 1399 IQTSSHD---STALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPH-HIGGF 1232
            + ++S D   S   R   PAAPV  NP IQ                          +GG 
Sbjct: 236  VPSASMDFSSSVVSRAIFPAAPVSSNPAIQQQIYPSYSSLPATNASSQGPWLQPPQMGGL 295

Query: 1231 ARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGAP-TTSFTAXXXXX 1055
             RP F PY AV P PFP+P    P  SV  PD QPPGV+P   A G P + + +      
Sbjct: 296  PRPPFVPYPAVYPTPFPLPAHGMPLPSVPLPDSQPPGVTPVGTAGGTPISAAVSGHHLAN 355

Query: 1054 XXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQSTYE 878
                 +ELPP GID+ +HV  A TKD A   EQ++AWTAH+T+TG+VYYYNALTG+STYE
Sbjct: 356  TSGMLSELPPPGIDDNKHVNGAGTKDGAAVNEQVDAWTAHKTDTGVVYYYNALTGESTYE 415

Query: 877  KPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            KPS FKGE+D+ TVQPT +SWEKL+GTDW LVTTNDG
Sbjct: 416  KPSDFKGEADKVTVQPTPVSWEKLTGTDWALVTTNDG 452


>ref|XP_002272014.2| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Vitis
            vinifera] gi|297738259|emb|CBI27460.3| unnamed protein
            product [Vitis vinifera]
          Length = 1046

 Score =  251 bits (642), Expect = 1e-63
 Identities = 141/245 (57%), Positives = 161/245 (65%), Gaps = 4/245 (1%)
 Frame = -1

Query: 737  GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEATY 558
            GGRD              ALD+IKKKLQDSG P +SS   + SG IASE+NGS ++E T 
Sbjct: 548  GGRDATPLRTSAVPGSASALDMIKKKLQDSGAPATSSPVHS-SGPIASELNGSRVIEPTV 606

Query: 557  KSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSKWE 390
            K LQ                              PTKEECI+QFKEMLKERGVAPFSKWE
Sbjct: 607  KGLQSENSKDKLKDTNGDGNMSDSSSDSEDVDSGPTKEECIIQFKEMLKERGVAPFSKWE 666

Query: 389  KELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEAKE 210
            KELPKIVFDPRFKAIP  SARR+LFEHYVRT                 EGFKQ+LEEA E
Sbjct: 667  KELPKIVFDPRFKAIPGYSARRSLFEHYVRTRAEEERKEKRAAQRAAIEGFKQLLEEASE 726

Query: 209  DIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSNFK 30
            DIDH T+YQTF+++WG+DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA  VS+FK
Sbjct: 727  DIDHKTEYQTFRKKWGDDPRFEALDRKDRELLLNERVLPLKRAAEEKAQAIRAAAVSSFK 786

Query: 29   QILEE 15
             +L +
Sbjct: 787  SMLRD 791



 Score =  246 bits (628), Expect = 6e-62
 Identities = 143/331 (43%), Positives = 184/331 (55%), Gaps = 6/331 (1%)
 Frame = -2

Query: 1741 PEGNSSHAGNYSFNANLLPNQTNQSQTTDVRADGSQEVGAITSAPAAMQSVSQPRPNASP 1562
            P G + +A ++SFN N    Q +Q+  +D     +QE G+++SA    QSV  P P +S 
Sbjct: 159  PRGPTPNAASFSFNGNPQLVQKDQTLKSDNSGAVAQEAGSMSSASHVSQSV--PFPCSSS 216

Query: 1561 AATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVSFVHSPSTSTIQTSSH 1382
              +  +S      T WMP  +  +F +P+ M   P TPGP G+       S   + ++S 
Sbjct: 217  TMSVSSSPKMGPTTLWMP--SNPSFPVPSGMPVTPGTPGPPGIAPSTPLSSNLAVPSASM 274

Query: 1381 D---STALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPH-HIGGFARPSFS 1214
            D   S   R   PAAPV  NP IQ                          +GG  RP F 
Sbjct: 275  DFSSSVVSRAIFPAAPVSSNPAIQQQIYPSYSSLPATNASSQGPWLQPPQMGGLPRPPFV 334

Query: 1213 PYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGAP-TTSFTAXXXXXXXXXQA 1037
            PY AV P PFP+P    P  SV  PD QPPGV+P   A G P + + +           +
Sbjct: 335  PYPAVYPTPFPLPAHGMPLPSVPLPDSQPPGVTPVGTAGGTPISAAVSGHHLANTSGMLS 394

Query: 1036 ELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQSTYEKPSGFK 860
            ELPP GID+ +HV  A TKD A   EQ++AWTAH+T+TG+VYYYNALTG+STYEKPS FK
Sbjct: 395  ELPPPGIDDNKHVNGAGTKDGAAVNEQVDAWTAHKTDTGVVYYYNALTGESTYEKPSDFK 454

Query: 859  GESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            GE+D+ TVQPT +SWEKL+GTDW LVTTNDG
Sbjct: 455  GEADKVTVQPTPVSWEKLTGTDWALVTTNDG 485


>gb|KDO53044.1| hypothetical protein CISIN_1g002026mg [Citrus sinensis]
            gi|641834042|gb|KDO53045.1| hypothetical protein
            CISIN_1g002026mg [Citrus sinensis]
          Length = 857

 Score =  244 bits (624), Expect = 2e-61
 Identities = 139/247 (56%), Positives = 157/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQDSG P ++S +P  S +  SE NGS  +E 
Sbjct: 357  NTGGRDATALRTSSMPGSSSALDLIKKKLQDSGTP-TASPAPVSSAAATSESNGSKAVEV 415

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSK 396
            T K LQ                              PTKEECI++FKEMLKERGVAPFSK
Sbjct: 416  TVKGLQNENTKDKLKDINGDGTMSDSSSDSEDGETGPTKEECIIKFKEMLKERGVAPFSK 475

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPKIVFDPRFKAI +QSARRALFE YV+T                 EGFKQ+LEE 
Sbjct: 476  WEKELPKIVFDPRFKAIQSQSARRALFERYVKTRAEEERKEKRAAQKAAIEGFKQLLEEV 535

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDH+TDYQTFK++WG DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA   S+
Sbjct: 536  SEDIDHSTDYQTFKKKWGSDPRFEALDRKDRELLLNERVLPLKRAAEEKAQAIRAAAASS 595

Query: 35   FKQILEE 15
            FK +L E
Sbjct: 596  FKSMLRE 602



 Score =  174 bits (441), Expect = 3e-40
 Identities = 117/293 (39%), Positives = 148/293 (50%), Gaps = 5/293 (1%)
 Frame = -2

Query: 1630 VGAITSAPAAMQSVSQPRPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPAT 1451
            +G+ TS  +     S    + S  AT  A+   +  TSWMP     +F  P  +   P T
Sbjct: 12   LGSSTSTNSQPVQASVRTFSDSTVATSSATA-LSTTTSWMP--TIPSFSTPPGLFVTPQT 68

Query: 1450 PGPAGLVSFVHSPSTSTIQTSSHDSTALRTFMP--AAPVLPNPPIQHNXXXXXXXXXXXX 1277
              P GL++ + +  TS+     + S  LR  +P  +AP      IQH             
Sbjct: 69   QAPPGLLT-LRTKDTSSAFGDFYSSAGLRPSVPTPSAPSNSGSAIQHQIYPTYPSLPPIG 127

Query: 1276 XXXXXXXXPHHIGGFARP--SFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVP 1103
                         G  RP   F PY A  P PFP+P    P  SVS  D QPPG+S SV 
Sbjct: 128  VSPQGPLLRPPQMG-VRPWLPFLPYPAAYPSPFPLPAHGMPNPSVSQIDAQPPGLS-SVR 185

Query: 1102 AIGAPTTSFTAXXXXXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTET 926
               A + S              E PP G D +EHV +  ++  A   EQL+AWTAH+T+T
Sbjct: 186  TAAATSHSAIPGHQLVGTSGNTEAPPSGTDKKEHVHDVSSRIGASVNEQLDAWTAHKTDT 245

Query: 925  GIVYYYNALTGQSTYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            GIVYYYNA+TG+STYEKP+GFKGE D+  VQPT IS E L+GTDW LVTTNDG
Sbjct: 246  GIVYYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDG 298


>gb|KDO53043.1| hypothetical protein CISIN_1g002026mg [Citrus sinensis]
          Length = 978

 Score =  244 bits (624), Expect = 2e-61
 Identities = 139/247 (56%), Positives = 157/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQDSG P ++S +P  S +  SE NGS  +E 
Sbjct: 478  NTGGRDATALRTSSMPGSSSALDLIKKKLQDSGTP-TASPAPVSSAAATSESNGSKAVEV 536

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSK 396
            T K LQ                              PTKEECI++FKEMLKERGVAPFSK
Sbjct: 537  TVKGLQNENTKDKLKDINGDGTMSDSSSDSEDGETGPTKEECIIKFKEMLKERGVAPFSK 596

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPKIVFDPRFKAI +QSARRALFE YV+T                 EGFKQ+LEE 
Sbjct: 597  WEKELPKIVFDPRFKAIQSQSARRALFERYVKTRAEEERKEKRAAQKAAIEGFKQLLEEV 656

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDH+TDYQTFK++WG DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA   S+
Sbjct: 657  SEDIDHSTDYQTFKKKWGSDPRFEALDRKDRELLLNERVLPLKRAAEEKAQAIRAAAASS 716

Query: 35   FKQILEE 15
            FK +L E
Sbjct: 717  FKSMLRE 723



 Score =  181 bits (459), Expect = 2e-42
 Identities = 132/350 (37%), Positives = 170/350 (48%), Gaps = 8/350 (2%)
 Frame = -2

Query: 1792 SGSAVQVMAHPGPPFVVPEGNSSHAGNYSFNANLL---PNQTNQSQTTDVRADGSQEVGA 1622
            SG +   + +  P   VP G SS    YS +  ++   PNQ  Q     + A     +G+
Sbjct: 80   SGHSASSVINSNPS--VPPGVSSFT--YSASQTVVGYSPNQQFQPNMNKLEAVEDAGLGS 135

Query: 1621 ITSAPAAMQSVSQPRPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGP 1442
             TS  +     S    + S  AT  A+   +  TSWMP     +F  P  +   P T  P
Sbjct: 136  STSTNSQPVQASVRTFSDSTVATSSATA-LSTTTSWMP--TIPSFSTPPGLFVTPQTQAP 192

Query: 1441 AGLVSFVHSPSTSTIQTSSHDSTALRTFMP--AAPVLPNPPIQHNXXXXXXXXXXXXXXX 1268
             GL++ + +  TS+     + S  LR  +P  +AP      IQH                
Sbjct: 193  PGLLT-LRTKDTSSAFGDFYSSAGLRPSVPTPSAPSNSGSAIQHQIYPTYPSLPPIGVSP 251

Query: 1267 XXXXXPHHIGGFARP--SFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIG 1094
                      G  RP   F PY A  P PFP+P    P  SVS  D QPPG+S SV    
Sbjct: 252  QGPLLRPPQMG-VRPWLPFLPYPAAYPSPFPLPAHGMPNPSVSQIDAQPPGLS-SVRTAA 309

Query: 1093 APTTSFTAXXXXXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIV 917
            A + S              E PP G D +EHV +  ++  A   EQL+AWTAH+T+TGIV
Sbjct: 310  ATSHSAIPGHQLVGTSGNTEAPPSGTDKKEHVHDVSSRIGASVNEQLDAWTAHKTDTGIV 369

Query: 916  YYYNALTGQSTYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            YYYNA+TG+STYEKP+GFKGE D+  VQPT IS E L+GTDW LVTTNDG
Sbjct: 370  YYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDG 419


>ref|XP_006484634.1| PREDICTED: pre-mRNA-processing protein 40C-like [Citrus sinensis]
          Length = 978

 Score =  244 bits (624), Expect = 2e-61
 Identities = 139/247 (56%), Positives = 157/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQDSG P ++S +P  S +  SE NGS  +E 
Sbjct: 478  NTGGRDATALRTSSMPGSSSALDLIKKKLQDSGTP-TASPAPVSSAAATSESNGSKAVEV 536

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSK 396
            T K LQ                              PTKEECI++FKEMLKERGVAPFSK
Sbjct: 537  TVKGLQNENTKDKLKDINGDGTMSDSSSDSEDGETGPTKEECIIKFKEMLKERGVAPFSK 596

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPKIVFDPRFKAI +QSARRALFE YV+T                 EGFKQ+LEE 
Sbjct: 597  WEKELPKIVFDPRFKAIQSQSARRALFERYVKTRAEEERKEKRAAQKAAIEGFKQLLEEV 656

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDH+TDYQTFK++WG DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA   S+
Sbjct: 657  SEDIDHSTDYQTFKKKWGSDPRFEALDRKDRELLLNERVLPLKRAAEEKAQAIRAAAASS 716

Query: 35   FKQILEE 15
            FK +L E
Sbjct: 717  FKSMLRE 723



 Score =  180 bits (456), Expect = 5e-42
 Identities = 131/350 (37%), Positives = 170/350 (48%), Gaps = 8/350 (2%)
 Frame = -2

Query: 1792 SGSAVQVMAHPGPPFVVPEGNSSHAGNYSFNANLL---PNQTNQSQTTDVRADGSQEVGA 1622
            SG +   + +  P   VP G SS    YS +  ++   PNQ  Q     + A     +G+
Sbjct: 80   SGHSASSVINSNPS--VPPGVSSFT--YSASQTVVGYSPNQQFQPNMNKLEAVEDAGLGS 135

Query: 1621 ITSAPAAMQSVSQPRPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGP 1442
             TS  +     S    + S  AT  A+   +  TSWMP     +F  P  +   P T  P
Sbjct: 136  STSTNSQPVQASVRTFSDSTVATSSATA-LSTTTSWMP--TIPSFSTPPGLFVTPQTQAP 192

Query: 1441 AGLVSFVHSPSTSTIQTSSHDSTALRTFMP--AAPVLPNPPIQHNXXXXXXXXXXXXXXX 1268
             GL++ + +  TS+     + S  LR  +P  +AP      IQH                
Sbjct: 193  PGLLT-LRTKDTSSAFGDFYSSAGLRPSVPTPSAPSNSGSAIQHQIYPTYPSLPPIGVSP 251

Query: 1267 XXXXXPHHIGGFARP--SFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIG 1094
                      G  RP   F PY A  P PFP+P    P  SVS  D QPPG+S S+    
Sbjct: 252  QGPLLQPPQMG-VRPWLPFLPYPAAYPSPFPLPAHGMPNPSVSQIDAQPPGLS-SMRTAA 309

Query: 1093 APTTSFTAXXXXXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIV 917
            A + S              E PP G D +EHV +  ++  A   EQL+AWTAH+T+TGIV
Sbjct: 310  ATSHSAIPGHQLVGTSGNTEAPPSGTDKKEHVHDVSSRIGASVNEQLDAWTAHKTDTGIV 369

Query: 916  YYYNALTGQSTYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            YYYNA+TG+STYEKP+GFKGE D+  VQPT IS E L+GTDW LVTTNDG
Sbjct: 370  YYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDG 419


>ref|XP_006437488.1| hypothetical protein CICLE_v10030612mg [Citrus clementina]
            gi|557539684|gb|ESR50728.1| hypothetical protein
            CICLE_v10030612mg [Citrus clementina]
          Length = 1015

 Score =  244 bits (624), Expect = 2e-61
 Identities = 139/247 (56%), Positives = 157/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQDSG P ++S +P  S +  SE NGS  +E 
Sbjct: 515  NTGGRDATALRTSSMPGSSSALDLIKKKLQDSGTP-TASPAPVSSAAATSESNGSKAVEV 573

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSK 396
            T K LQ                              PTKEECI++FKEMLKERGVAPFSK
Sbjct: 574  TVKGLQNENTKDKLKDINGDGTMSDSSSDSEDGETGPTKEECIIKFKEMLKERGVAPFSK 633

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPKIVFDPRFKAI +QSARRALFE YV+T                 EGFKQ+LEE 
Sbjct: 634  WEKELPKIVFDPRFKAIQSQSARRALFERYVKTRAEEERKEKRAAQKAAIEGFKQLLEEV 693

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDH+TDYQTFK++WG DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA   S+
Sbjct: 694  SEDIDHSTDYQTFKKKWGSDPRFEALDRKDRELLLNERVLPLKRAAEEKAQAIRAAAASS 753

Query: 35   FKQILEE 15
            FK +L E
Sbjct: 754  FKSMLRE 760



 Score =  180 bits (456), Expect = 5e-42
 Identities = 131/350 (37%), Positives = 170/350 (48%), Gaps = 8/350 (2%)
 Frame = -2

Query: 1792 SGSAVQVMAHPGPPFVVPEGNSSHAGNYSFNANLL---PNQTNQSQTTDVRADGSQEVGA 1622
            SG +   + +  P   VP G SS    YS +  ++   PNQ  Q     + A     +G+
Sbjct: 117  SGHSASSVINSNPS--VPPGVSSFT--YSASQTVVGYSPNQQFQPNMNKLEAVEDAGLGS 172

Query: 1621 ITSAPAAMQSVSQPRPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGP 1442
             TS  +     S    + S  AT  A+   +  TSWMP     +F  P  +   P T  P
Sbjct: 173  STSTNSQPVQASVRTFSDSTVATSSATA-LSTTTSWMP--TIPSFSTPPGLFVTPQTQAP 229

Query: 1441 AGLVSFVHSPSTSTIQTSSHDSTALRTFMP--AAPVLPNPPIQHNXXXXXXXXXXXXXXX 1268
             GL++ + +  TS+     + S  LR  +P  +AP      IQH                
Sbjct: 230  PGLLT-LRTKDTSSAFGDFYSSAGLRPSVPTPSAPSNSGSAIQHQIYPTHPSLPPVGVSP 288

Query: 1267 XXXXXPHHIGGFARP--SFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIG 1094
                      G  RP   F PY A  P PFP+P    P  SVS  D QPPG+S S+    
Sbjct: 289  QRPLLQPPQMG-VRPWLPFLPYPAAYPSPFPLPAHGMPNPSVSQIDAQPPGLS-SMRTAA 346

Query: 1093 APTTSFTAXXXXXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIV 917
            A + S              E PP G D +EHV +  ++  A   EQL+AWTAH+T+TGIV
Sbjct: 347  ATSHSAIPGHQLVGTSGNTEAPPSGTDKKEHVHDVSSRIGASVNEQLDAWTAHKTDTGIV 406

Query: 916  YYYNALTGQSTYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            YYYNA+TG+STYEKP+GFKGE D+  VQPT IS E L+GTDW LVTTNDG
Sbjct: 407  YYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDG 456


>ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative [Ricinus communis]
            gi|223545064|gb|EEF46576.1| Pre-mRNA-processing protein
            PRP40, putative [Ricinus communis]
          Length = 886

 Score =  244 bits (622), Expect = 3e-61
 Identities = 133/247 (53%), Positives = 160/247 (64%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQDSG P +SS +P   G    E NGS  +EA
Sbjct: 384  NTGGRDATALRASNALGASSALDLIKKKLQDSGTPVTSSPAPVSLGITTPESNGSRAMEA 443

Query: 563  TYKSL----QXXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECILQFKEMLKERGVAPFSK 396
            T K L                              GPTKEECI+QFK+MLKERG+APFSK
Sbjct: 444  TSKGLPSENSKEKLKDANGDANASDSSSDSEEEDNGPTKEECIIQFKDMLKERGIAPFSK 503

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEK LPKIVFDPRF+AIP+ SARR+LFEHYV+T                 EGF+Q+LEEA
Sbjct: 504  WEKVLPKIVFDPRFQAIPSHSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFRQLLEEA 563

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             E+IDHNTDYQ+F+R+WG DPRF+A+DRKDRE+LL+ERVL LK++AQEKA AERA   ++
Sbjct: 564  SEEIDHNTDYQSFRRKWGNDPRFEAVDRKDREHLLHERVLPLKKAAQEKAQAERAAAAAS 623

Query: 35   FKQILEE 15
            FK +L++
Sbjct: 624  FKSMLQD 630



 Score =  169 bits (429), Expect = 7e-39
 Identities = 120/339 (35%), Positives = 165/339 (48%), Gaps = 9/339 (2%)
 Frame = -2

Query: 1756 PPFVVPEGNSSHAGNYSFNANLLPNQTNQS--QTTDVRADGSQEVGAITSAPAAMQSVSQ 1583
            PP  VP G +  + +Y+ + + L    NQ    T+D  A   Q   A++SAP        
Sbjct: 15   PPVPVP-GFTPPSFSYNISQSALHFSANQQFHSTSDASASVPQAT-ALSSAP-------- 64

Query: 1582 PRPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVS---FVHSP 1412
                         S++ +  T    L +P+ F +P  +A    TPGPAG VS    +  P
Sbjct: 65   -----------IVSHSSSTSTKTTSLSSPS-FLVPPGLA---GTPGPAGSVSCGPMILPP 109

Query: 1411 STSTIQTSSHDSTALRTFMPAAPVLPNPPIQH-NXXXXXXXXXXXXXXXXXXXXPHHIGG 1235
             T    TSS      R  MP      NP +Q  +                    P  +GG
Sbjct: 110  VTVDSATSS----VQRPVMPTVTHASNPVVQQQSYHTYPSLPAMAASAQGLWFHPPQMGG 165

Query: 1234 FARPSFSPYA-AVVPGPFPMPIRSTPPQSVSYPDIQPPGVSP-SVPAIGAPTTSFTAXXX 1061
              R  F PY  AV PG +P+P       S+S PD QP G  P  +P    P+++ +    
Sbjct: 166  MPRTPFLPYPPAVFPGSYPLPAHGISRPSISSPDFQPSGAPPVGIPGANPPSSAASGHQL 225

Query: 1060 XXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQST 884
                  Q E+PP GIDNR  + +  TK+ A + + L+AWTAH+T+ G+VYYYNA+TG ST
Sbjct: 226  MGTPGMQKEIPPPGIDNRSQIHDFGTKNNAATSDSLDAWTAHKTDAGVVYYYNAVTGVST 285

Query: 883  YEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            YEKP GFK E ++  +QPT +S E L+GTDW L+TTNDG
Sbjct: 286  YEKPPGFKSEPEKVPMQPTPVSMENLAGTDWALITTNDG 324


>ref|XP_011013692.1| PREDICTED: pre-mRNA-processing protein 40C isoform X3 [Populus
            euphratica] gi|743801054|ref|XP_011013716.1| PREDICTED:
            pre-mRNA-processing protein 40C-like isoform X3 [Populus
            euphratica]
          Length = 964

 Score =  243 bits (619), Expect = 6e-61
 Identities = 134/247 (54%), Positives = 158/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQ+ G P  S+     SG+ ASE NGS ++EA
Sbjct: 457  NTGGRDATALRVLSVPGASSALDLIKKKLQEFGAPAISAAVSVSSGAAASESNGSRVVEA 516

Query: 563  TYKSL----QXXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECILQFKEMLKERGVAPFSK 396
              K L                              GP+KEECI+QFKEMLKERGVAPFSK
Sbjct: 517  AAKGLPSEISKDKLKDANGDGNISDSSTDSEDEDDGPSKEECIIQFKEMLKERGVAPFSK 576

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPK+VFDPRFKAIP+ SARR+LFEHYV+T                 EGFKQ+LEEA
Sbjct: 577  WEKELPKLVFDPRFKAIPSHSARRSLFEHYVKTRAEEKRKEKRAAQKAAVEGFKQLLEEA 636

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDHNTDYQTF+++WG D RF+ALDRKDRE+LLNER+  LK++AQEKA AERA   ++
Sbjct: 637  SEDIDHNTDYQTFRKKWGNDLRFEALDRKDREHLLNERIHLLKKAAQEKAQAERACAAAS 696

Query: 35   FKQILEE 15
            FK +L +
Sbjct: 697  FKSMLRD 703



 Score =  186 bits (472), Expect = 7e-44
 Identities = 136/353 (38%), Positives = 172/353 (48%), Gaps = 10/353 (2%)
 Frame = -2

Query: 1795 SSGSAVQVMAHPGPPFVVPEGNSSHAGNYSFNA-----NLLPNQTNQSQTTDVRADGSQE 1631
            SSG+A+     PG P  VP   SS   ++S+           NQ  QS      A GS  
Sbjct: 58   SSGAALNSNP-PGQPVPVPGPASSVGLSFSYKIPQTGPGFPGNQQVQSIVDKSPAQGS-- 114

Query: 1630 VGAITSAPAAMQSVSQPRPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPAT 1451
              A + AP A QSVS    + S + T  +SN     +     PA A+F++P  + + P T
Sbjct: 115  --APSVAPIASQSVSFSIHSPSSSYTSLSSNLGPTPSQ---TPATASFYLPPGLPRTPGT 169

Query: 1450 PGPAGLVSFVHSPSTSTIQTS-SHDSTALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXX 1274
              P GLV     PS    Q S + DS  L    P  P +P+                   
Sbjct: 170  LPPQGLV-----PSAPMTQPSVAVDSLPLGVQRPIMPTMPSSNAVQQQTYPTYPSLPVMA 224

Query: 1273 XXXXXXXPHH--IGGFARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPA 1100
                    H   IGG  R  F PY A  PG FP P    P  SVS PD QPPGV P   +
Sbjct: 225  ASPQALWMHPPPIGGMPRQPFLPYPAAFPGSFPPPGHGMPYPSVSLPDSQPPGVVPVGHS 284

Query: 1099 IGAP-TTSFTAXXXXXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTET 926
               P ++S +          Q ELPP GIDN  H+ ++ T+D A   E   AWTAH+T+T
Sbjct: 285  YAIPMSSSASVHQLPGAPGMQTELPPPGIDNHNHLHHSGTRDNAAVSEPSHAWTAHKTDT 344

Query: 925  GIVYYYNALTGQSTYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            G+ YYYNA+TG STYEKP GFK E ++ +VQPT +S E L+GTDW L+TTNDG
Sbjct: 345  GVFYYYNAVTGVSTYEKPPGFK-EPEKVSVQPTPVSMENLAGTDWVLITTNDG 396


>ref|XP_011013685.1| PREDICTED: pre-mRNA-processing protein 40C isoform X2 [Populus
            euphratica] gi|743801050|ref|XP_011013713.1| PREDICTED:
            pre-mRNA-processing protein 40C-like isoform X2 [Populus
            euphratica]
          Length = 967

 Score =  243 bits (619), Expect = 6e-61
 Identities = 134/247 (54%), Positives = 158/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQ+ G P  S+     SG+ ASE NGS ++EA
Sbjct: 460  NTGGRDATALRVLSVPGASSALDLIKKKLQEFGAPAISAAVSVSSGAAASESNGSRVVEA 519

Query: 563  TYKSL----QXXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECILQFKEMLKERGVAPFSK 396
              K L                              GP+KEECI+QFKEMLKERGVAPFSK
Sbjct: 520  AAKGLPSEISKDKLKDANGDGNISDSSTDSEDEDDGPSKEECIIQFKEMLKERGVAPFSK 579

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPK+VFDPRFKAIP+ SARR+LFEHYV+T                 EGFKQ+LEEA
Sbjct: 580  WEKELPKLVFDPRFKAIPSHSARRSLFEHYVKTRAEEKRKEKRAAQKAAVEGFKQLLEEA 639

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDHNTDYQTF+++WG D RF+ALDRKDRE+LLNER+  LK++AQEKA AERA   ++
Sbjct: 640  SEDIDHNTDYQTFRKKWGNDLRFEALDRKDREHLLNERIHLLKKAAQEKAQAERACAAAS 699

Query: 35   FKQILEE 15
            FK +L +
Sbjct: 700  FKSMLRD 706



 Score =  183 bits (465), Expect = 4e-43
 Identities = 129/337 (38%), Positives = 164/337 (48%), Gaps = 5/337 (1%)
 Frame = -2

Query: 1762 PGPPFVVPEGNSSHAGNYSFNANLLPNQTNQSQTTDVRADGSQEVGAITSAPAAMQSVSQ 1583
            PG P  VP   SS   ++S+           +Q     A GS    A + AP A QSVS 
Sbjct: 76   PGQPVPVPGPASSVGLSFSYKIPQTGPGFPGNQQDKSPAQGS----APSVAPIASQSVSF 131

Query: 1582 PRPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVSFVHSPSTS 1403
               + S + T  +SN     +     PA A+F++P  + + P T  P GLV     PS  
Sbjct: 132  SIHSPSSSYTSLSSNLGPTPSQ---TPATASFYLPPGLPRTPGTLPPQGLV-----PSAP 183

Query: 1402 TIQTS-SHDSTALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPHH--IGGF 1232
              Q S + DS  L    P  P +P+                           H   IGG 
Sbjct: 184  MTQPSVAVDSLPLGVQRPIMPTMPSSNAVQQQTYPTYPSLPVMAASPQALWMHPPPIGGM 243

Query: 1231 ARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGAP-TTSFTAXXXXX 1055
             R  F PY A  PG FP P    P  SVS PD QPPGV P   +   P ++S +      
Sbjct: 244  PRQPFLPYPAAFPGSFPPPGHGMPYPSVSLPDSQPPGVVPVGHSYAIPMSSSASVHQLPG 303

Query: 1054 XXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQSTYE 878
                Q ELPP GIDN  H+ ++ T+D A   E   AWTAH+T+TG+ YYYNA+TG STYE
Sbjct: 304  APGMQTELPPPGIDNHNHLHHSGTRDNAAVSEPSHAWTAHKTDTGVFYYYNAVTGVSTYE 363

Query: 877  KPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            KP GFK E ++ +VQPT +S E L+GTDW L+TTNDG
Sbjct: 364  KPPGFK-EPEKVSVQPTPVSMENLAGTDWVLITTNDG 399


>ref|XP_011013679.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Populus
            euphratica] gi|743799678|ref|XP_011013705.1| PREDICTED:
            pre-mRNA-processing protein 40C-like isoform X1 [Populus
            euphratica]
          Length = 972

 Score =  243 bits (619), Expect = 6e-61
 Identities = 134/247 (54%), Positives = 158/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQ+ G P  S+     SG+ ASE NGS ++EA
Sbjct: 465  NTGGRDATALRVLSVPGASSALDLIKKKLQEFGAPAISAAVSVSSGAAASESNGSRVVEA 524

Query: 563  TYKSL----QXXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECILQFKEMLKERGVAPFSK 396
              K L                              GP+KEECI+QFKEMLKERGVAPFSK
Sbjct: 525  AAKGLPSEISKDKLKDANGDGNISDSSTDSEDEDDGPSKEECIIQFKEMLKERGVAPFSK 584

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPK+VFDPRFKAIP+ SARR+LFEHYV+T                 EGFKQ+LEEA
Sbjct: 585  WEKELPKLVFDPRFKAIPSHSARRSLFEHYVKTRAEEKRKEKRAAQKAAVEGFKQLLEEA 644

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDHNTDYQTF+++WG D RF+ALDRKDRE+LLNER+  LK++AQEKA AERA   ++
Sbjct: 645  SEDIDHNTDYQTFRKKWGNDLRFEALDRKDREHLLNERIHLLKKAAQEKAQAERACAAAS 704

Query: 35   FKQILEE 15
            FK +L +
Sbjct: 705  FKSMLRD 711



 Score =  185 bits (469), Expect = 2e-43
 Identities = 132/342 (38%), Positives = 166/342 (48%), Gaps = 10/342 (2%)
 Frame = -2

Query: 1762 PGPPFVVPEGNSSHAGNYSFNA-----NLLPNQTNQSQTTDVRADGSQEVGAITSAPAAM 1598
            PG P  VP   SS   ++S+           NQ  QS      A GS    A + AP A 
Sbjct: 76   PGQPVPVPGPASSVGLSFSYKIPQTGPGFPGNQQVQSIVDKSPAQGS----APSVAPIAS 131

Query: 1597 QSVSQPRPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVSFVH 1418
            QSVS    + S + T  +SN     +     PA A+F++P  + + P T  P GLV    
Sbjct: 132  QSVSFSIHSPSSSYTSLSSNLGPTPSQ---TPATASFYLPPGLPRTPGTLPPQGLV---- 184

Query: 1417 SPSTSTIQTS-SHDSTALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPHH- 1244
             PS    Q S + DS  L    P  P +P+                           H  
Sbjct: 185  -PSAPMTQPSVAVDSLPLGVQRPIMPTMPSSNAVQQQTYPTYPSLPVMAASPQALWMHPP 243

Query: 1243 -IGGFARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGAP-TTSFTA 1070
             IGG  R  F PY A  PG FP P    P  SVS PD QPPGV P   +   P ++S + 
Sbjct: 244  PIGGMPRQPFLPYPAAFPGSFPPPGHGMPYPSVSLPDSQPPGVVPVGHSYAIPMSSSASV 303

Query: 1069 XXXXXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTG 893
                     Q ELPP GIDN  H+ ++ T+D A   E   AWTAH+T+TG+ YYYNA+TG
Sbjct: 304  HQLPGAPGMQTELPPPGIDNHNHLHHSGTRDNAAVSEPSHAWTAHKTDTGVFYYYNAVTG 363

Query: 892  QSTYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
             STYEKP GFK E ++ +VQPT +S E L+GTDW L+TTNDG
Sbjct: 364  VSTYEKPPGFK-EPEKVSVQPTPVSMENLAGTDWVLITTNDG 404


>ref|XP_010250283.1| PREDICTED: pre-mRNA-processing protein 40C isoform X2 [Nelumbo
            nucifera]
          Length = 894

 Score =  241 bits (615), Expect = 2e-60
 Identities = 136/246 (55%), Positives = 153/246 (62%), Gaps = 3/246 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGR+              ALDLIKKKLQDS  P +SS  P  SG   +++NGS  +EA
Sbjct: 393  NTGGREATSLRPSGVAGSSSALDLIKKKLQDSIAPATSSPLPTSSGPTTADLNGSRPVEA 452

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG---PTKEECILQFKEMLKERGVAPFSKW 393
              K LQ                             P+KEECI+QFKEMLKERGVAPFSKW
Sbjct: 453  AVKGLQSENKDKVKDINGDGNISDSSSDSEDEDSGPSKEECIIQFKEMLKERGVAPFSKW 512

Query: 392  EKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEAK 213
            EKELPKIVFDPRFKA+P  SARRALFEHYVRT                 EGFKQ+LEEA 
Sbjct: 513  EKELPKIVFDPRFKAVPGYSARRALFEHYVRTRAEEERKEKRAAQKAAIEGFKQLLEEAS 572

Query: 212  EDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSNF 33
            EDID  TDYQTFK +WG DPRF+ALDRK+RE LLNERVL LK++A+EKA A RA   S F
Sbjct: 573  EDIDQRTDYQTFKMKWGSDPRFEALDRKERELLLNERVLPLKKAAEEKAQAIRAAAASGF 632

Query: 32   KQILEE 15
            K +L E
Sbjct: 633  KSLLRE 638



 Score =  219 bits (557), Expect = 9e-54
 Identities = 137/341 (40%), Positives = 181/341 (53%), Gaps = 6/341 (1%)
 Frame = -2

Query: 1771 MAHPGP-PFVVPEGNSSHAGNYSFNANLLPNQTNQSQTTDVRADGSQEVGAITSAPAAMQ 1595
            MA  GP P  VP+G  S A ++SFN      Q + S  +      ++E G ++ A ++  
Sbjct: 1    MASQGPSPVSVPKGAPSIATSFSFNRIPQLAQKDLSSNSSASVAVAREAGTVSPASSSSV 60

Query: 1594 SVSQP---RPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVSF 1424
             VS P    P++  AAT   S N    T WMP+ AP+ F  P  M   P TPGP G+   
Sbjct: 61   PVSMPFHVSPSSLAAAT---SPNLCPATLWMPV-APS-FVPPPGMPITPGTPGPPGIAPS 115

Query: 1423 VHSPSTSTIQTSSHDSTALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPHH 1244
                ST T+ + + DS++  +  P  P      +Q                      P  
Sbjct: 116  TPLSSTVTVNSEAMDSSSSTSLRPVVP----STVQQQMHSPYPALPSMPPPPQGLWLPPQ 171

Query: 1243 IGGFARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGAPTTSF-TAX 1067
            IGG  RP F PY  V+PG +P+P+R  P  SV  PD QPPG+SP  P  G P++S  +  
Sbjct: 172  IGGLQRPPFLPYPGVLPGSYPLPMRGMPLPSVPVPDSQPPGISPLGPPGGTPSSSVGSVH 231

Query: 1066 XXXXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQ 890
                    Q +LPP G D  +H+ +   K  A    +++AWTAH+TETG+VYYYNALTG+
Sbjct: 232  LPSNTTGKQPDLPPPGTDQHKHIDDLADKVGATVNAKVDAWTAHKTETGVVYYYNALTGE 291

Query: 889  STYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            STYE+PS F GE D+ TVQPT +S EKL GTDW LVTTNDG
Sbjct: 292  STYERPSEFHGEPDKVTVQPTPVSCEKLVGTDWALVTTNDG 332


>ref|XP_010250268.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Nelumbo
            nucifera] gi|719963615|ref|XP_010250275.1| PREDICTED:
            pre-mRNA-processing protein 40C isoform X1 [Nelumbo
            nucifera]
          Length = 1088

 Score =  241 bits (615), Expect = 2e-60
 Identities = 136/246 (55%), Positives = 153/246 (62%), Gaps = 3/246 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGR+              ALDLIKKKLQDS  P +SS  P  SG   +++NGS  +EA
Sbjct: 587  NTGGREATSLRPSGVAGSSSALDLIKKKLQDSIAPATSSPLPTSSGPTTADLNGSRPVEA 646

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG---PTKEECILQFKEMLKERGVAPFSKW 393
              K LQ                             P+KEECI+QFKEMLKERGVAPFSKW
Sbjct: 647  AVKGLQSENKDKVKDINGDGNISDSSSDSEDEDSGPSKEECIIQFKEMLKERGVAPFSKW 706

Query: 392  EKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEAK 213
            EKELPKIVFDPRFKA+P  SARRALFEHYVRT                 EGFKQ+LEEA 
Sbjct: 707  EKELPKIVFDPRFKAVPGYSARRALFEHYVRTRAEEERKEKRAAQKAAIEGFKQLLEEAS 766

Query: 212  EDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSNF 33
            EDID  TDYQTFK +WG DPRF+ALDRK+RE LLNERVL LK++A+EKA A RA   S F
Sbjct: 767  EDIDQRTDYQTFKMKWGSDPRFEALDRKERELLLNERVLPLKKAAEEKAQAIRAAAASGF 826

Query: 32   KQILEE 15
            K +L E
Sbjct: 827  KSLLRE 832



 Score =  225 bits (573), Expect = 1e-55
 Identities = 140/350 (40%), Positives = 185/350 (52%), Gaps = 6/350 (1%)
 Frame = -2

Query: 1798 FSSGSAVQVMAHPGP-PFVVPEGNSSHAGNYSFNANLLPNQTNQSQTTDVRADGSQEVGA 1622
            F  G+  Q MA  GP P  VP+G  S A ++SFN      Q + S  +      ++E G 
Sbjct: 186  FGPGTGAQFMASQGPSPVSVPKGAPSIATSFSFNRIPQLAQKDLSSNSSASVAVAREAGT 245

Query: 1621 ITSAPAAMQSVSQP---RPNASPAATHFASNNFNNMTSWMPLPAPATFHMPARMAKNPAT 1451
            ++ A ++   VS P    P++  AAT   S N    T WMP+ AP+ F  P  M   P T
Sbjct: 246  VSPASSSSVPVSMPFHVSPSSLAAAT---SPNLCPATLWMPV-APS-FVPPPGMPITPGT 300

Query: 1450 PGPAGLVSFVHSPSTSTIQTSSHDSTALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXX 1271
            PGP G+       ST T+ + + DS++  +  P  P      +Q                
Sbjct: 301  PGPPGIAPSTPLSSTVTVNSEAMDSSSSTSLRPVVP----STVQQQMHSPYPALPSMPPP 356

Query: 1270 XXXXXXPHHIGGFARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGA 1091
                  P  IGG  RP F PY  V+PG +P+P+R  P  SV  PD QPPG+SP  P  G 
Sbjct: 357  PQGLWLPPQIGGLQRPPFLPYPGVLPGSYPLPMRGMPLPSVPVPDSQPPGISPLGPPGGT 416

Query: 1090 PTTSF-TAXXXXXXXXXQAELPP-GIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIV 917
            P++S  +          Q +LPP G D  +H+ +   K  A    +++AWTAH+TETG+V
Sbjct: 417  PSSSVGSVHLPSNTTGKQPDLPPPGTDQHKHIDDLADKVGATVNAKVDAWTAHKTETGVV 476

Query: 916  YYYNALTGQSTYEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            YYYNALTG+STYE+PS F GE D+ TVQPT +S EKL GTDW LVTTNDG
Sbjct: 477  YYYNALTGESTYERPSEFHGEPDKVTVQPTPVSCEKLVGTDWALVTTNDG 526


>gb|KJB15270.1| hypothetical protein B456_002G167700 [Gossypium raimondii]
          Length = 888

 Score =  241 bits (614), Expect = 2e-60
 Identities = 137/247 (55%), Positives = 158/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQD G+P SSS  P V  +   E+NGS  ++ 
Sbjct: 389  NTGGRDAMPLRTSVVPGSSSALDLIKKKLQDPGVP-SSSPVPVVPVTATHELNGSRAVDV 447

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSK 396
              K LQ                              P+KEECI+QFKEMLKERGVAPFSK
Sbjct: 448  --KGLQSESNKDKLKDANGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSK 505

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPKIVFDPRFKAIP+ SARR+LFEHYV+T                 EGFKQ+L+EA
Sbjct: 506  WEKELPKIVFDPRFKAIPSHSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEA 565

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDH+T+YQTFKR+WG DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA   S+
Sbjct: 566  SEDIDHDTNYQTFKRKWGSDPRFEALDRKDRELLLNERVLLLKRAAEEKARAIRAAAASS 625

Query: 35   FKQILEE 15
            FK +L+E
Sbjct: 626  FKSMLKE 632



 Score =  201 bits (511), Expect = 2e-48
 Identities = 136/339 (40%), Positives = 175/339 (51%), Gaps = 9/339 (2%)
 Frame = -2

Query: 1756 PPFVVPEGNSSHAGNYSFNAN--LLPNQTNQSQTTDVRADGSQEVGAITSAPAAMQSVSQ 1583
            PP  VP+G  S + ++SF  N  L+ N   Q   +D  A G+Q + A  S+P+   +VSQ
Sbjct: 4    PPLPVPQGALSSSASFSFTPNPQLVQNAQIQPSKSDTLATGTQAMAA--SSPS---TVSQ 58

Query: 1582 PRPNASPAATHFASN-----NFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVSFVH 1418
              P     ++ F  N     +F  +TS MP   P  F M +  +    TPG  G +    
Sbjct: 59   SGPLPVHNSSEFTMNASTTPSFAPVTSRMPTTPP--FPMSSGSSGTSGTPGHPGSI---- 112

Query: 1417 SPSTSTIQTSSH-DSTALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPHH- 1244
             PS   I  S+  DS +     P APV  NP +Q                       H  
Sbjct: 113  -PSIQMITASAAVDSPSSAVPGPGAPVSLNPAVQQQVYPPYTSLPSMVSSPQGYWMQHPP 171

Query: 1243 IGGFARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGAPTTSFTAXX 1064
            +GGF RP F PY  V PGPFP      P  + S  D QPPGV P   +  AP+ +  A  
Sbjct: 172  MGGFPRPPFVPYPTVYPGPFPSTSSGMPLPAPS-SDSQPPGVRPLGMSPFAPSAAALANQ 230

Query: 1063 XXXXXXXQAELPPGIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQST 884
                       P GIDNR+ V +  TK E+   EQ + WTAH+T+TG+VYYYNALTG+ST
Sbjct: 231  SLAILTGFP--PQGIDNRKLVHDVTTKVESAGNEQSDVWTAHKTDTGVVYYYNALTGEST 288

Query: 883  YEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            YEKP+GFKGE D+ TVQPT +S E+L+GTDW LVTTNDG
Sbjct: 289  YEKPAGFKGEPDQVTVQPTPVSVEQLAGTDWALVTTNDG 327


>gb|KJB15269.1| hypothetical protein B456_002G167700 [Gossypium raimondii]
          Length = 886

 Score =  241 bits (614), Expect = 2e-60
 Identities = 137/247 (55%), Positives = 158/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQD G+P SSS  P V  +   E+NGS  ++ 
Sbjct: 388  NTGGRDAMPLRTSVVPGSSSALDLIKKKLQDPGVP-SSSPVPVVPVTATHELNGSRAVDV 446

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSK 396
              K LQ                              P+KEECI+QFKEMLKERGVAPFSK
Sbjct: 447  --KGLQSESNKDKLKDANGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSK 504

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPKIVFDPRFKAIP+ SARR+LFEHYV+T                 EGFKQ+L+EA
Sbjct: 505  WEKELPKIVFDPRFKAIPSHSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEA 564

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDH+T+YQTFKR+WG DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA   S+
Sbjct: 565  SEDIDHDTNYQTFKRKWGSDPRFEALDRKDRELLLNERVLLLKRAAEEKARAIRAAAASS 624

Query: 35   FKQILEE 15
            FK +L+E
Sbjct: 625  FKSMLKE 631



 Score =  201 bits (511), Expect = 2e-48
 Identities = 136/339 (40%), Positives = 175/339 (51%), Gaps = 9/339 (2%)
 Frame = -2

Query: 1756 PPFVVPEGNSSHAGNYSFNAN--LLPNQTNQSQTTDVRADGSQEVGAITSAPAAMQSVSQ 1583
            PP  VP+G  S + ++SF  N  L+ N   Q   +D  A G+Q + A  S+P+   +VSQ
Sbjct: 4    PPLPVPQGALSSSASFSFTPNPQLVQNAQIQPSKSDTLATGTQAMAA--SSPS---TVSQ 58

Query: 1582 PRPNASPAATHFASN-----NFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVSFVH 1418
              P     ++ F  N     +F  +TS MP   P  F M +  +    TPG  G +    
Sbjct: 59   SGPLPVHNSSEFTMNASTTPSFAPVTSRMPTTPP--FPMSSGSSGTSGTPGHPGSI---- 112

Query: 1417 SPSTSTIQTSSH-DSTALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPHH- 1244
             PS   I  S+  DS +     P APV  NP +Q                       H  
Sbjct: 113  -PSIQMITASAAVDSPSSAVPGPGAPVSLNPAVQQQVYPPYTSLPSMVSSPQGYWMQHPP 171

Query: 1243 IGGFARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGAPTTSFTAXX 1064
            +GGF RP F PY  V PGPFP      P  + S  D QPPGV P   +  AP+ +  A  
Sbjct: 172  MGGFPRPPFVPYPTVYPGPFPSTSSGMPLPAPS-SDSQPPGVRPLGMSPFAPSAAALANQ 230

Query: 1063 XXXXXXXQAELPPGIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQST 884
                       P GIDNR+ V +  TK E+   EQ + WTAH+T+TG+VYYYNALTG+ST
Sbjct: 231  SLAILTGFP--PQGIDNRKLVHDVTTKVESAGNEQSDVWTAHKTDTGVVYYYNALTGEST 288

Query: 883  YEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            YEKP+GFKGE D+ TVQPT +S E+L+GTDW LVTTNDG
Sbjct: 289  YEKPAGFKGEPDQVTVQPTPVSVEQLAGTDWALVTTNDG 327


>gb|KJB15268.1| hypothetical protein B456_002G167700 [Gossypium raimondii]
          Length = 736

 Score =  241 bits (614), Expect = 2e-60
 Identities = 137/247 (55%), Positives = 158/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743 N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
           N GGRD              ALDLIKKKLQD G+P SSS  P V  +   E+NGS  ++ 
Sbjct: 237 NTGGRDAMPLRTSVVPGSSSALDLIKKKLQDPGVP-SSSPVPVVPVTATHELNGSRAVDV 295

Query: 563 TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSK 396
             K LQ                              P+KEECI+QFKEMLKERGVAPFSK
Sbjct: 296 --KGLQSESNKDKLKDANGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSK 353

Query: 395 WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
           WEKELPKIVFDPRFKAIP+ SARR+LFEHYV+T                 EGFKQ+L+EA
Sbjct: 354 WEKELPKIVFDPRFKAIPSHSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEA 413

Query: 215 KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
            EDIDH+T+YQTFKR+WG DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA   S+
Sbjct: 414 SEDIDHDTNYQTFKRKWGSDPRFEALDRKDRELLLNERVLLLKRAAEEKARAIRAAAASS 473

Query: 35  FKQILEE 15
           FK +L+E
Sbjct: 474 FKSMLKE 480


>ref|XP_012467146.1| PREDICTED: pre-mRNA-processing protein 40C [Gossypium raimondii]
            gi|763747828|gb|KJB15267.1| hypothetical protein
            B456_002G167700 [Gossypium raimondii]
          Length = 887

 Score =  241 bits (614), Expect = 2e-60
 Identities = 137/247 (55%), Positives = 158/247 (63%), Gaps = 4/247 (1%)
 Frame = -1

Query: 743  N*GGRDXXXXXXXXXXXXXXALDLIKKKLQDSGIPDSSSTSPAVSGSIASEVNGSNLLEA 564
            N GGRD              ALDLIKKKLQD G+P SSS  P V  +   E+NGS  ++ 
Sbjct: 388  NTGGRDAMPLRTSVVPGSSSALDLIKKKLQDPGVP-SSSPVPVVPVTATHELNGSRAVDV 446

Query: 563  TYKSLQXXXXXXXXXXXXXXXXXXXXXXXXXG----PTKEECILQFKEMLKERGVAPFSK 396
              K LQ                              P+KEECI+QFKEMLKERGVAPFSK
Sbjct: 447  --KGLQSESNKDKLKDANGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSK 504

Query: 395  WEKELPKIVFDPRFKAIPNQSARRALFEHYVRTXXXXXXXXXXXXXXXXXEGFKQILEEA 216
            WEKELPKIVFDPRFKAIP+ SARR+LFEHYV+T                 EGFKQ+L+EA
Sbjct: 505  WEKELPKIVFDPRFKAIPSHSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEA 564

Query: 215  KEDIDHNTDYQTFKRRWGEDPRFQALDRKDRENLLNERVLFLKRSAQEKALAERAVGVSN 36
             EDIDH+T+YQTFKR+WG DPRF+ALDRKDRE LLNERVL LKR+A+EKA A RA   S+
Sbjct: 565  SEDIDHDTNYQTFKRKWGSDPRFEALDRKDRELLLNERVLLLKRAAEEKARAIRAAAASS 624

Query: 35   FKQILEE 15
            FK +L+E
Sbjct: 625  FKSMLKE 631



 Score =  201 bits (511), Expect = 2e-48
 Identities = 136/339 (40%), Positives = 175/339 (51%), Gaps = 9/339 (2%)
 Frame = -2

Query: 1756 PPFVVPEGNSSHAGNYSFNAN--LLPNQTNQSQTTDVRADGSQEVGAITSAPAAMQSVSQ 1583
            PP  VP+G  S + ++SF  N  L+ N   Q   +D  A G+Q + A  S+P+   +VSQ
Sbjct: 4    PPLPVPQGALSSSASFSFTPNPQLVQNAQIQPSKSDTLATGTQAMAA--SSPS---TVSQ 58

Query: 1582 PRPNASPAATHFASN-----NFNNMTSWMPLPAPATFHMPARMAKNPATPGPAGLVSFVH 1418
              P     ++ F  N     +F  +TS MP   P  F M +  +    TPG  G +    
Sbjct: 59   SGPLPVHNSSEFTMNASTTPSFAPVTSRMPTTPP--FPMSSGSSGTSGTPGHPGSI---- 112

Query: 1417 SPSTSTIQTSSH-DSTALRTFMPAAPVLPNPPIQHNXXXXXXXXXXXXXXXXXXXXPHH- 1244
             PS   I  S+  DS +     P APV  NP +Q                       H  
Sbjct: 113  -PSIQMITASAAVDSPSSAVPGPGAPVSLNPAVQQQVYPPYTSLPSMVSSPQGYWMQHPP 171

Query: 1243 IGGFARPSFSPYAAVVPGPFPMPIRSTPPQSVSYPDIQPPGVSPSVPAIGAPTTSFTAXX 1064
            +GGF RP F PY  V PGPFP      P  + S  D QPPGV P   +  AP+ +  A  
Sbjct: 172  MGGFPRPPFVPYPTVYPGPFPSTSSGMPLPAPS-SDSQPPGVRPLGMSPFAPSAAALANQ 230

Query: 1063 XXXXXXXQAELPPGIDNREHVVNAETKDEAPSKEQLEAWTAHRTETGIVYYYNALTGQST 884
                       P GIDNR+ V +  TK E+   EQ + WTAH+T+TG+VYYYNALTG+ST
Sbjct: 231  SLAILTGFP--PQGIDNRKLVHDVTTKVESAGNEQSDVWTAHKTDTGVVYYYNALTGEST 288

Query: 883  YEKPSGFKGESDRATVQPTSISWEKLSGTDWTLVTTNDG 767
            YEKP+GFKGE D+ TVQPT +S E+L+GTDW LVTTNDG
Sbjct: 289  YEKPAGFKGEPDQVTVQPTPVSVEQLAGTDWALVTTNDG 327