BLASTX nr result
ID: Perilla23_contig00020935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00020935
(1158 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV su... 514 e-143
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythra... 514 e-143
ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV su... 510 e-141
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 438 e-120
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma... 384 e-103
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su... 368 6e-99
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su... 368 6e-99
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su... 364 7e-98
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su... 364 7e-98
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 362 4e-97
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 362 4e-97
emb|CDP09818.1| unnamed protein product [Coffea canephora] 354 7e-95
ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su... 350 1e-93
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su... 350 1e-93
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 350 1e-93
ref|XP_010053343.1| PREDICTED: DNA-directed RNA polymerase IV su... 347 8e-93
ref|XP_010108047.1| DNA-directed RNA polymerase D subunit 1 [Mor... 336 2e-89
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 331 8e-88
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 331 8e-88
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 331 8e-88
>ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe
guttatus] gi|848869730|ref|XP_012835485.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Erythranthe
guttatus] gi|848869733|ref|XP_012835486.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Erythranthe
guttatus]
Length = 1447
Score = 514 bits (1324), Expect = e-143
Identities = 244/361 (67%), Positives = 300/361 (83%)
Frame = -1
Query: 1155 EFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWER 976
EFKKVDILWK+ + KF R P G+PFLRVV S+YC+ TKFWS L DKCL IR+IIDW++
Sbjct: 1087 EFKKVDILWKDDPKHPKFSRSPPGKPFLRVVMSEYCERTKFWSILKDKCLPIRNIIDWKQ 1146
Query: 975 SHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNP 796
SHPD LD EA+G+DAAWQ FV SLH+AIS TGK ILPEHL++ ANCLSATGEFVPLN
Sbjct: 1147 SHPDDILDISEAYGVDAAWQCFVTSLHSAISGTGKPILPEHLILTANCLSATGEFVPLNA 1206
Query: 795 RGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQ 616
+GLA QRKE N++SPF+Q C NPSDCF+KAAK Q+DGL+GSLEAL+WGQTP IGTG +
Sbjct: 1207 KGLALQRKEANVHSPFNQGCLSNPSDCFLKAAKMGQMDGLQGSLEALAWGQTPPIGTGCR 1266
Query: 615 FDILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEVKPVCRKSIASYHFNSKGQKTLLQKM 436
FDI+Y GKGH PA+ +VY+LLS H AK N K V SI+SYHFN+KG KTLL++M
Sbjct: 1267 FDIVYNGKGHIPAKNADVYSLLSTHAERAKPNAMPKQVSGISISSYHFNTKGCKTLLRRM 1326
Query: 435 LSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQDKYGTGISDIK 256
+SQ+FS+VGI+K+SQ+LKR+LK+YP N +L+GED+STA+ AL+FHP+ +DK G+G+S+IK
Sbjct: 1327 VSQNFSMVGIQKISQRLKRMLKQYPMNSQLTGEDRSTAIRALQFHPQWKDKIGSGVSEIK 1386
Query: 255 VGRHPEYKENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSKNNNVVRNPAMDL 76
VGRHPE+KE CFFLVRTDG+EEDFSY+KCI HALE+I+PEKAK RS+ NVVRN ++L
Sbjct: 1387 VGRHPEHKETCFFLVRTDGTEEDFSYNKCIRHALEIIAPEKAKGYRSRKENVVRNQVIEL 1446
Query: 75 D 73
D
Sbjct: 1447 D 1447
>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythranthe guttata]
Length = 1379
Score = 514 bits (1324), Expect = e-143
Identities = 244/361 (67%), Positives = 300/361 (83%)
Frame = -1
Query: 1155 EFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWER 976
EFKKVDILWK+ + KF R P G+PFLRVV S+YC+ TKFWS L DKCL IR+IIDW++
Sbjct: 1019 EFKKVDILWKDDPKHPKFSRSPPGKPFLRVVMSEYCERTKFWSILKDKCLPIRNIIDWKQ 1078
Query: 975 SHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNP 796
SHPD LD EA+G+DAAWQ FV SLH+AIS TGK ILPEHL++ ANCLSATGEFVPLN
Sbjct: 1079 SHPDDILDISEAYGVDAAWQCFVTSLHSAISGTGKPILPEHLILTANCLSATGEFVPLNA 1138
Query: 795 RGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQ 616
+GLA QRKE N++SPF+Q C NPSDCF+KAAK Q+DGL+GSLEAL+WGQTP IGTG +
Sbjct: 1139 KGLALQRKEANVHSPFNQGCLSNPSDCFLKAAKMGQMDGLQGSLEALAWGQTPPIGTGCR 1198
Query: 615 FDILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEVKPVCRKSIASYHFNSKGQKTLLQKM 436
FDI+Y GKGH PA+ +VY+LLS H AK N K V SI+SYHFN+KG KTLL++M
Sbjct: 1199 FDIVYNGKGHIPAKNADVYSLLSTHAERAKPNAMPKQVSGISISSYHFNTKGCKTLLRRM 1258
Query: 435 LSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQDKYGTGISDIK 256
+SQ+FS+VGI+K+SQ+LKR+LK+YP N +L+GED+STA+ AL+FHP+ +DK G+G+S+IK
Sbjct: 1259 VSQNFSMVGIQKISQRLKRMLKQYPMNSQLTGEDRSTAIRALQFHPQWKDKIGSGVSEIK 1318
Query: 255 VGRHPEYKENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSKNNNVVRNPAMDL 76
VGRHPE+KE CFFLVRTDG+EEDFSY+KCI HALE+I+PEKAK RS+ NVVRN ++L
Sbjct: 1319 VGRHPEHKETCFFLVRTDGTEEDFSYNKCIRHALEIIAPEKAKGYRSRKENVVRNQVIEL 1378
Query: 75 D 73
D
Sbjct: 1379 D 1379
>ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Sesamum indicum]
Length = 1408
Score = 510 bits (1313), Expect = e-141
Identities = 246/360 (68%), Positives = 300/360 (83%)
Frame = -1
Query: 1155 EFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWER 976
EFKKVDILWK+ +N+ +F + PSGE FLRVV S+YCD TKFWS L DKCLRIR+IIDWER
Sbjct: 1049 EFKKVDILWKDEANHKRFSKRPSGELFLRVVMSEYCDRTKFWSILKDKCLRIRNIIDWER 1108
Query: 975 SHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNP 796
SHPD DY EA+GID AWQ FVNSLH+AISDTGK+ILPEHLVV ANCLS TGEF+PLN
Sbjct: 1109 SHPDDIHDYSEAYGIDTAWQCFVNSLHSAISDTGKTILPEHLVVTANCLSTTGEFLPLNA 1168
Query: 795 RGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQ 616
+GL+ QRKE NI +PFSQACFLNPSDC VKAAK QLD L+GSLEALSWGQTPSIGTG Q
Sbjct: 1169 KGLSLQRKEANIQAPFSQACFLNPSDCLVKAAKMGQLDALQGSLEALSWGQTPSIGTGCQ 1228
Query: 615 FDILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEVKPVCRKSIASYHFNSKGQKTLLQKM 436
FDI+Y GKGHEP + T+VYTLLSNHVR AK N K + + N K ++TL+++M
Sbjct: 1229 FDIMYNGKGHEPEKPTDVYTLLSNHVRCAKPNDVAKHLSVRP-NGLSPNIKQRQTLVKRM 1287
Query: 435 LSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQDKYGTGISDIK 256
+SQHFSVVGI+K+SQ+LKR+LKEYP N +L+GEDKSTAM AL+FHP+ ++K GTG+ DIK
Sbjct: 1288 VSQHFSVVGIQKISQRLKRMLKEYPMNSQLNGEDKSTAMRALQFHPRWEEKIGTGVMDIK 1347
Query: 255 VGRHPEYKENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSKNNNVVRNPAMDL 76
VGRHP++KE+CF L+RTDG+EEDFSY+KCI++AL++++PEKAK S+ N+ RNP +++
Sbjct: 1348 VGRHPDHKESCFVLIRTDGTEEDFSYNKCIHNALQIVAPEKAKAYLSRKENLNRNPEVEV 1407
>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
Length = 1380
Score = 438 bits (1126), Expect = e-120
Identities = 216/344 (62%), Positives = 268/344 (77%), Gaps = 3/344 (0%)
Frame = -1
Query: 1155 EFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWER 976
EFKKVDILWK+ N+ K R SGE F+RV S+YCD KFWS L+D CLRIR++IDWER
Sbjct: 1037 EFKKVDILWKDEPNHEKVARRTSGELFIRVSMSEYCDPNKFWSNLVDSCLRIRNLIDWER 1096
Query: 975 SHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNP 796
S PD LDY AFGI +AWQ FV +LH++I DTGK+ILPEHL+V ANCLSATGEFV LN
Sbjct: 1097 SLPDDILDYSNAFGISSAWQSFVKNLHSSIIDTGKTILPEHLIVTANCLSATGEFVALNA 1156
Query: 795 RGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQ 616
+GL +QRKE +I SPF+QA FLNPSD FVKAAKA Q D L GS+EALSWGQTP IGTG Q
Sbjct: 1157 KGLVNQRKEIDIRSPFNQATFLNPSDTFVKAAKACQTDDLVGSVEALSWGQTPRIGTGCQ 1216
Query: 615 FDILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEVKPVCRKSIASYH-FNSKGQKTLLQK 439
FD++YKGKGHE A+ +VY LL +H AK+N + + + KS H N++ K+ L++
Sbjct: 1217 FDLIYKGKGHETAKNEDVYGLLISHDGRAKSNVKERSLSMKSSNPLHGINTQQHKSWLER 1276
Query: 438 MLS--QHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQDKYGTGIS 265
+ + H SV+GIKK+SQKLKRILKEYP +R+LSGEDKSTA+ AL+FHP+ +K G+GI
Sbjct: 1277 LSANMNHLSVLGIKKISQKLKRILKEYPMDRQLSGEDKSTALTALQFHPRWPEKIGSGIQ 1336
Query: 264 DIKVGRHPEYKENCFFLVRTDGSEEDFSYHKCINHALEMISPEK 133
+IKVG HPE+++ CF L R+DG+EEDFSY KCINHALE+++P K
Sbjct: 1337 EIKVGLHPEHQQTCFILKRSDGTEEDFSYRKCINHALELVAPRK 1380
>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
Length = 1112
Score = 384 bits (985), Expect = e-103
Identities = 190/334 (56%), Positives = 252/334 (75%), Gaps = 4/334 (1%)
Frame = -1
Query: 1155 EFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWER 976
EFKKVDILWK+ + S+F +C SGEP++RV S+ C+ +FW+ L++K LRIRS+IDW+R
Sbjct: 769 EFKKVDILWKDEQSRSRFSKCSSGEPYVRVFMSENCERARFWNILVEKSLRIRSLIDWDR 828
Query: 975 SHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNP 796
SHPD DY EAFGID AW FVNSL++AIS+TGK+ILPEHL+ ANCLS TGEFV LN
Sbjct: 829 SHPDDVHDYGEAFGIDTAWMCFVNSLNSAISETGKTILPEHLIATANCLSMTGEFVSLNA 888
Query: 795 RGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQ 616
+GLA QRKE I SPF QACF NPSDCF+KAAK Q+D L+GS+++L+WGQTP IGTG Q
Sbjct: 889 KGLAQQRKEATINSPFVQACFSNPSDCFIKAAKMGQMDNLQGSVDSLAWGQTPPIGTGGQ 948
Query: 615 FDILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEVK-PV--CRKSIASYHFNSKGQKTLL 445
FDI+Y GKGHEP++ T+VY+LL++ V AK + ++K PV + S + + G+K L
Sbjct: 949 FDIIYSGKGHEPSKPTDVYSLLNSQVGFAKPSEKIKLPVQFTSGNDQSQNLKTNGRKRFL 1008
Query: 444 QKMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQDKYGTGIS 265
M S + I++VS LKR+L EY ++ +L GEDK+ A+ AL++HP+ ++K G G
Sbjct: 1009 AGMKSLRSAEDEIREVSLALKRMLHEYASDCQLRGEDKTLALRALQYHPRWEEKTGAGTV 1068
Query: 264 DIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCI 166
+IKVGRHP++KE+ CFF+V+TDG+EED SY K I
Sbjct: 1069 EIKVGRHPDHKESRCFFVVKTDGTEEDISYRKSI 1102
>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana sylvestris]
Length = 1254
Score = 368 bits (944), Expect = 6e-99
Identities = 189/360 (52%), Positives = 245/360 (68%), Gaps = 12/360 (3%)
Frame = -1
Query: 1152 FKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWERS 973
FKKVDILW+E + SK R +GE +L+V S+ CD FW+ L+D CL I +IDWE S
Sbjct: 879 FKKVDILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEWS 938
Query: 972 HPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNPR 793
HPD D A+G+D AW++F+ +L++A+S+TGK ILPEHLV+AA+CL+ATGEFVPLN +
Sbjct: 939 HPDNVHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTK 998
Query: 792 GLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQF 613
GLA QRK + SPF QACF +P D FV+AAK E D L+GSLEAL+WG+TPS GTGF F
Sbjct: 999 GLAQQRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSF 1058
Query: 612 DILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEV----------KPVCRKSIASYHFNSK 463
DI+Y GKG+EPA T+VY LL NHV S K +V K + R+ N+K
Sbjct: 1059 DIIYSGKGYEPAAPTDVYALLGNHVTSNKQQVKVTLDEDNETADKALARRLCKLDDLNTK 1118
Query: 462 GQKTLLQ-KMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQD 286
K+ L S IKK+SQ LK++L +Y +R LS DKS M+AL FHP+ +
Sbjct: 1119 RCKSQWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSE 1178
Query: 285 KYGTGISDIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSKN 109
K G G +IK+G H EY+++ CF LVRTDG+ EDFSY KC+ HALE+I+P+KAKT + N
Sbjct: 1179 KIGKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYKWLN 1238
>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Nicotiana
sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
Length = 1447
Score = 368 bits (944), Expect = 6e-99
Identities = 189/360 (52%), Positives = 245/360 (68%), Gaps = 12/360 (3%)
Frame = -1
Query: 1152 FKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWERS 973
FKKVDILW+E + SK R +GE +L+V S+ CD FW+ L+D CL I +IDWE S
Sbjct: 1072 FKKVDILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEWS 1131
Query: 972 HPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNPR 793
HPD D A+G+D AW++F+ +L++A+S+TGK ILPEHLV+AA+CL+ATGEFVPLN +
Sbjct: 1132 HPDNVHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTK 1191
Query: 792 GLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQF 613
GLA QRK + SPF QACF +P D FV+AAK E D L+GSLEAL+WG+TPS GTGF F
Sbjct: 1192 GLAQQRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSF 1251
Query: 612 DILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEV----------KPVCRKSIASYHFNSK 463
DI+Y GKG+EPA T+VY LL NHV S K +V K + R+ N+K
Sbjct: 1252 DIIYSGKGYEPAAPTDVYALLGNHVTSNKQQVKVTLDEDNETADKALARRLCKLDDLNTK 1311
Query: 462 GQKTLLQ-KMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQD 286
K+ L S IKK+SQ LK++L +Y +R LS DKS M+AL FHP+ +
Sbjct: 1312 RCKSQWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSE 1371
Query: 285 KYGTGISDIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSKN 109
K G G +IK+G H EY+++ CF LVRTDG+ EDFSY KC+ HALE+I+P+KAKT + N
Sbjct: 1372 KIGKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYKWLN 1431
>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 1211
Score = 364 bits (935), Expect = 7e-98
Identities = 187/360 (51%), Positives = 245/360 (68%), Gaps = 12/360 (3%)
Frame = -1
Query: 1152 FKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWERS 973
FKKVDILW+E + SK R +GE +L+V S+ CD FW+ L+D CL I +IDWE+S
Sbjct: 836 FKKVDILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEQS 895
Query: 972 HPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNPR 793
HPD D A+G+D AW++F+ +L++A+S+TGK IL EHLV+AA+CL+ATGEFVPLN +
Sbjct: 896 HPDNVHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILLEHLVLAADCLTATGEFVPLNTK 955
Query: 792 GLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQF 613
GLA QRK + SPF QACF +P D FV+AAK E D L+GSLEAL+WG+TPS GTGF F
Sbjct: 956 GLAQQRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSF 1015
Query: 612 DILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEV----------KPVCRKSIASYHFNSK 463
DI+Y GKG+EPA T+VY LL NHV S + +V K + R+ N+K
Sbjct: 1016 DIIYSGKGYEPAAPTDVYALLGNHVTSNRQQVKVTLDEDNETADKALARRLCKLDDLNTK 1075
Query: 462 GQKTLLQ-KMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQD 286
K+ L S IKK+SQ LK++L +Y +R LS DKS M+AL FHP+ +
Sbjct: 1076 RCKSQWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSE 1135
Query: 285 KYGTGISDIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSKN 109
K G G +IK+G H EY+++ CF LVRTDG+ EDFSY KC+ HALE+I+P+KAKT + N
Sbjct: 1136 KIGKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYKWLN 1195
>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana tomentosiformis]
Length = 1447
Score = 364 bits (935), Expect = 7e-98
Identities = 187/360 (51%), Positives = 245/360 (68%), Gaps = 12/360 (3%)
Frame = -1
Query: 1152 FKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWERS 973
FKKVDILW+E + SK R +GE +L+V S+ CD FW+ L+D CL I +IDWE+S
Sbjct: 1072 FKKVDILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEQS 1131
Query: 972 HPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNPR 793
HPD D A+G+D AW++F+ +L++A+S+TGK IL EHLV+AA+CL+ATGEFVPLN +
Sbjct: 1132 HPDNVHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILLEHLVLAADCLTATGEFVPLNTK 1191
Query: 792 GLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQF 613
GLA QRK + SPF QACF +P D FV+AAK E D L+GSLEAL+WG+TPS GTGF F
Sbjct: 1192 GLAQQRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSF 1251
Query: 612 DILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEV----------KPVCRKSIASYHFNSK 463
DI+Y GKG+EPA T+VY LL NHV S + +V K + R+ N+K
Sbjct: 1252 DIIYSGKGYEPAAPTDVYALLGNHVTSNRQQVKVTLDEDNETADKALARRLCKLDDLNTK 1311
Query: 462 GQKTLLQ-KMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQD 286
K+ L S IKK+SQ LK++L +Y +R LS DKS M+AL FHP+ +
Sbjct: 1312 RCKSQWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSE 1371
Query: 285 KYGTGISDIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSKN 109
K G G +IK+G H EY+++ CF LVRTDG+ EDFSY KC+ HALE+I+P+KAKT + N
Sbjct: 1372 KIGKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYKWLN 1431
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 362 bits (928), Expect = 4e-97
Identities = 190/361 (52%), Positives = 246/361 (68%), Gaps = 13/361 (3%)
Frame = -1
Query: 1152 FKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWERS 973
FKKVDILWKE + SK R +GE +L+V S+ CD KFW+ L+D CL+IR +IDWERS
Sbjct: 869 FKKVDILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERS 928
Query: 972 HPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNPR 793
+PD D A+GID AW++F+ LH+A+S+TGK ILPEHLV+AA+ L+ATGEFVPL+ +
Sbjct: 929 YPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAK 988
Query: 792 GLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQF 613
GL QRK + SPF QACF NP D FV+AAK D L+GSLE+L+WG+TPSIGTG F
Sbjct: 989 GLTLQRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSF 1048
Query: 612 DILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEV----------KPVCRKSIASYHFNSK 463
DI+Y GKG+EPAE +VYTLL NHV S +V K + R+ N K
Sbjct: 1049 DIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDDLNKK 1108
Query: 462 GQKTLLQ-KMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQD 286
K+ L S IKK+SQ LK++L +Y +R L+ DK AM+AL+FHP+ +
Sbjct: 1109 SCKSEWSITKLRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNE 1168
Query: 285 KYGTGI-SDIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSK 112
K G G +IK+G H EY+++ CF LVR+DGS EDFSY KC+ HALE+I+P+KAKT+R
Sbjct: 1169 KIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKTSRWL 1228
Query: 111 N 109
N
Sbjct: 1229 N 1229
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 362 bits (928), Expect = 4e-97
Identities = 190/361 (52%), Positives = 246/361 (68%), Gaps = 13/361 (3%)
Frame = -1
Query: 1152 FKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWERS 973
FKKVDILWKE + SK R +GE +L+V S+ CD KFW+ L+D CL+IR +IDWERS
Sbjct: 1082 FKKVDILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERS 1141
Query: 972 HPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNPR 793
+PD D A+GID AW++F+ LH+A+S+TGK ILPEHLV+AA+ L+ATGEFVPL+ +
Sbjct: 1142 YPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAK 1201
Query: 792 GLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQF 613
GL QRK + SPF QACF NP D FV+AAK D L+GSLE+L+WG+TPSIGTG F
Sbjct: 1202 GLTLQRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSF 1261
Query: 612 DILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEV----------KPVCRKSIASYHFNSK 463
DI+Y GKG+EPAE +VYTLL NHV S +V K + R+ N K
Sbjct: 1262 DIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDDLNKK 1321
Query: 462 GQKTLLQ-KMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQD 286
K+ L S IKK+SQ LK++L +Y +R L+ DK AM+AL+FHP+ +
Sbjct: 1322 SCKSEWSITKLRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNE 1381
Query: 285 KYGTGI-SDIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSK 112
K G G +IK+G H EY+++ CF LVR+DGS EDFSY KC+ HALE+I+P+KAKT+R
Sbjct: 1382 KIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKTSRWL 1441
Query: 111 N 109
N
Sbjct: 1442 N 1442
>emb|CDP09818.1| unnamed protein product [Coffea canephora]
Length = 1511
Score = 354 bits (909), Expect = 7e-95
Identities = 187/356 (52%), Positives = 242/356 (67%), Gaps = 8/356 (2%)
Frame = -1
Query: 1155 EFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWER 976
EFKKVDI+WK+ N SK + G +LRV S+ CD TKFWS L+D CLRIR +IDWER
Sbjct: 1136 EFKKVDIMWKDCRNSSKSSKGSLGGVYLRVFMSEKCDRTKFWSVLVDNCLRIRDLIDWER 1195
Query: 975 SHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNP 796
SHPD D A+GIDAA F++SL++AISDTGK+ILPEHLV+ A+CLSATGEFV LN
Sbjct: 1196 SHPDDIHDMAPAYGIDAAVNHFLSSLNSAISDTGKTILPEHLVLTADCLSATGEFVALNA 1255
Query: 795 RGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQ 616
+GLA QRKET + SPF QACF +P DCFV+AAK +D L+G+++AL+WG PSIGTG +
Sbjct: 1256 KGLAQQRKETAVSSPFLQACFSSPGDCFVRAAKTGIVDNLQGTVDALAWGMVPSIGTGAR 1315
Query: 615 FDILYKGKGHEPAERTNVYTLLSNHV---RSAKTNTEVKPVCRKSIASYHFNSKGQKT-- 451
FDI+Y GKGHEPA+ +VY LL + V + K + + KSI + F T
Sbjct: 1316 FDIIYSGKGHEPAKSIDVYDLLGSIVNLNQQVKFPNKDYEMSGKSIVQHLFAYDDLATKG 1375
Query: 450 --LLQKMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQDKYG 277
L + +L FS+ I+K+S LK +L +Y + +LS DK+ M AL FHP+ +K G
Sbjct: 1376 CILPRTLLRNFFSLKDIQKLSHSLKHMLNKYDVDCQLSEIDKTIVMAALSFHPRSSEKIG 1435
Query: 276 TGISDIKVGRHPEY-KENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSK 112
G +IKVG H EY CF LVR DG+ DFSYHKC+++AL++I+P+ AK SK
Sbjct: 1436 IGAHEIKVGYHSEYDNSRCFVLVRKDGTVADFSYHKCVHNALQLIAPDWAKKYESK 1491
>ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Solanum lycopersicum]
Length = 1307
Score = 350 bits (898), Expect = 1e-93
Identities = 185/361 (51%), Positives = 243/361 (67%), Gaps = 13/361 (3%)
Frame = -1
Query: 1152 FKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWERS 973
FKKVDILWKE + SK R P+GE +L+V S+ CD KFW+ L+D CL+IR +IDWERS
Sbjct: 943 FKKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERS 1002
Query: 972 HPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNPR 793
+PD D A+GID AW++F+ LH+A+S+TGK ILPEHLV+AA+ L+ TGEFVPL+ +
Sbjct: 1003 YPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAK 1062
Query: 792 GLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQF 613
GL QRK + SPF QACF NP D FV+AAK D L+GSLE+L+WG+TPSIGTG F
Sbjct: 1063 GLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGKTPSIGTGSSF 1122
Query: 612 DILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEV----------KPVCRKSIASYHFNSK 463
DI+Y GKG+E AE+ NVYTLL N V N +V + R+ + K
Sbjct: 1123 DIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDKK 1182
Query: 462 GQKTLLQ-KMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQD 286
K+ L L +FS IKK+SQ LK++L +Y R L+ DK AM+AL+FHP+ +
Sbjct: 1183 SCKSELSFTKLRSYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRRNE 1242
Query: 285 KYGTGI-SDIKVGRHPEYK-ENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSK 112
K G G +IK+G H E++ CF +VR+D + EDFSY KC+ HALE+I+P+KAKT+R
Sbjct: 1243 KIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALELIAPQKAKTSRWL 1302
Query: 111 N 109
N
Sbjct: 1303 N 1303
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum lycopersicum] gi|723724576|ref|XP_010325435.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Solanum lycopersicum]
Length = 1446
Score = 350 bits (898), Expect = 1e-93
Identities = 185/361 (51%), Positives = 243/361 (67%), Gaps = 13/361 (3%)
Frame = -1
Query: 1152 FKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWERS 973
FKKVDILWKE + SK R P+GE +L+V S+ CD KFW+ L+D CL+IR +IDWERS
Sbjct: 1082 FKKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERS 1141
Query: 972 HPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNPR 793
+PD D A+GID AW++F+ LH+A+S+TGK ILPEHLV+AA+ L+ TGEFVPL+ +
Sbjct: 1142 YPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAK 1201
Query: 792 GLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQF 613
GL QRK + SPF QACF NP D FV+AAK D L+GSLE+L+WG+TPSIGTG F
Sbjct: 1202 GLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGKTPSIGTGSSF 1261
Query: 612 DILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEV----------KPVCRKSIASYHFNSK 463
DI+Y GKG+E AE+ NVYTLL N V N +V + R+ + K
Sbjct: 1262 DIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDKK 1321
Query: 462 GQKTLLQ-KMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQD 286
K+ L L +FS IKK+SQ LK++L +Y R L+ DK AM+AL+FHP+ +
Sbjct: 1322 SCKSELSFTKLRSYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRRNE 1381
Query: 285 KYGTGI-SDIKVGRHPEYK-ENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSK 112
K G G +IK+G H E++ CF +VR+D + EDFSY KC+ HALE+I+P+KAKT+R
Sbjct: 1382 KIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALELIAPQKAKTSRWL 1441
Query: 111 N 109
N
Sbjct: 1442 N 1442
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 350 bits (898), Expect = 1e-93
Identities = 185/361 (51%), Positives = 243/361 (67%), Gaps = 13/361 (3%)
Frame = -1
Query: 1152 FKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWERS 973
FKKVDILWKE + SK R P+GE +L+V S+ CD KFW+ L+D CL+IR +IDWERS
Sbjct: 774 FKKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERS 833
Query: 972 HPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNPR 793
+PD D A+GID AW++F+ LH+A+S+TGK ILPEHLV+AA+ L+ TGEFVPL+ +
Sbjct: 834 YPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAK 893
Query: 792 GLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQF 613
GL QRK + SPF QACF NP D FV+AAK D L+GSLE+L+WG+TPSIGTG F
Sbjct: 894 GLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGKTPSIGTGSSF 953
Query: 612 DILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEV----------KPVCRKSIASYHFNSK 463
DI+Y GKG+E AE+ NVYTLL N V N +V + R+ + K
Sbjct: 954 DIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDKK 1013
Query: 462 GQKTLLQ-KMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKLQD 286
K+ L L +FS IKK+SQ LK++L +Y R L+ DK AM+AL+FHP+ +
Sbjct: 1014 SCKSELSFTKLRSYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRRNE 1073
Query: 285 KYGTGI-SDIKVGRHPEYK-ENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRSK 112
K G G +IK+G H E++ CF +VR+D + EDFSY KC+ HALE+I+P+KAKT+R
Sbjct: 1074 KIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALELIAPQKAKTSRWL 1133
Query: 111 N 109
N
Sbjct: 1134 N 1134
>ref|XP_010053343.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324654|ref|XP_010053344.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324662|ref|XP_010053345.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324668|ref|XP_010053346.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324674|ref|XP_010053347.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324680|ref|XP_010053348.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324687|ref|XP_010053349.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|629112658|gb|KCW77618.1| hypothetical protein
EUGRSUZ_D01929 [Eucalyptus grandis]
Length = 1473
Score = 347 bits (891), Expect = 8e-93
Identities = 179/361 (49%), Positives = 243/361 (67%), Gaps = 12/361 (3%)
Frame = -1
Query: 1158 LEFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWE 979
+E KKVDILW E SK +GE +LRV S + + K WS LM+ C+ I IDW
Sbjct: 1104 MEIKKVDILWSESGKLSKSKPVSTGELYLRVSMSAHSEKMKLWSVLMNNCVPIMDAIDWS 1163
Query: 978 RSHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLN 799
RSHPD ++ A GIDA W++F+NSL +A+SDTGK++LPEHLV+ ANCLS +GEFV LN
Sbjct: 1164 RSHPDNIREFSLANGIDAGWKYFLNSLGSAVSDTGKTVLPEHLVLLANCLSTSGEFVGLN 1223
Query: 798 PRGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGF 619
P+G++ QR+ +++ SPF QACF NP CF+KAAKA +D L+GSL+AL+WG+ PS+GTG
Sbjct: 1224 PKGMSRQREISSVASPFVQACFSNPGPCFIKAAKAGTVDSLQGSLDALAWGKVPSLGTGG 1283
Query: 618 QFDILYKGKGHEPAERTNVYTLLSNHVRSAKTN---------TEVKPVCRKSIASYHFNS 466
F+I+Y GKGHE A+ +VY LL N V S + N + V C S
Sbjct: 1284 LFEIIYSGKGHELAKPESVYNLLGNKVSSTQQNIKLEVPNAGSHVPDTCGAEFVQADSVS 1343
Query: 465 KGQKTL-LQKMLSQHFSVVG-IKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFHPKL 292
K K L + K L + F I+K+S +LK+IL +YP + L ++KS M+ALKFHP+
Sbjct: 1344 KVLKKLEINKSLFRKFITFNDIQKLSLELKKILYKYPIDHHLGEQEKSIVMMALKFHPRG 1403
Query: 291 QDKYGTGISDIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCINHALEMISPEKAKTNRS 115
++K GTG +IKVG HP+++++ CF LVR DG EDFSYHKC+ ALE+I+P++AKT +S
Sbjct: 1404 KEKIGTGARNIKVGHHPKHQDSRCFMLVRDDGMAEDFSYHKCVLGALEIIAPQRAKTYQS 1463
Query: 114 K 112
K
Sbjct: 1464 K 1464
>ref|XP_010108047.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
gi|587930670|gb|EXC17779.1| DNA-directed RNA polymerase D
subunit 1 [Morus notabilis]
Length = 1410
Score = 336 bits (862), Expect = 2e-89
Identities = 174/363 (47%), Positives = 237/363 (65%), Gaps = 16/363 (4%)
Frame = -1
Query: 1155 EFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWER 976
E +KVDILW +RSN SK R SGE +L+V S V +WSTLM+ CLRI +IDW R
Sbjct: 1033 EIEKVDILWSDRSNTSKATRDSSGELYLKVSMSGDSGVKSYWSTLMNDCLRIMDLIDWSR 1092
Query: 975 SHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLNP 796
SHP+ ++ +GID+ W+FF+N+L +A+SD GK+ILPEHL++ AN LS TG FV L P
Sbjct: 1093 SHPENVNEFCSVYGIDSGWKFFLNNLESAVSDVGKTILPEHLLLVANTLSVTGNFVGLTP 1152
Query: 795 RGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGFQ 616
+GLA QR+ ++ +PFSQACF NP+ CF+KAAKAE DGL G+L+AL+WG P +GTG Q
Sbjct: 1153 KGLARQREHASVATPFSQACFSNPAACFIKAAKAEVTDGLHGTLDALAWGNIPPLGTGGQ 1212
Query: 615 FDILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEVKPVCRKSIASYHFNSK-GQKTLLQK 439
F++++ GKGHE + NVY +L+ + + +V+ V A H + K G L K
Sbjct: 1213 FELVFSGKGHEVDKPINVYDMLATGI-----SPDVQGVNETPDAKNHRSVKFGALLLYDK 1267
Query: 438 MLSQHFSVVGIKK--------------VSQKLKRILKEYPTNRRLSGEDKSTAMIALKFH 301
+SQ +GI K +S L +IL +YP N+ L +DKST MIAL FH
Sbjct: 1268 SVSQGLKKLGISKDRIKKLFKLDDIWILSNALAKILNKYPINQSLDHKDKSTLMIALYFH 1327
Query: 300 PKLQDKYGTGISDIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCINHALEMISPEKAKT 124
P++ +K GTG DIKV HP+++ + CF LVR DG+ EDFSY KC+ ALE+I P+ A+
Sbjct: 1328 PRIDEKIGTGFQDIKVAYHPKHQSSRCFVLVRADGTVEDFSYRKCVLGALEIIDPQAAEI 1387
Query: 123 NRS 115
+S
Sbjct: 1388 YKS 1390
>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
vinifera]
Length = 1354
Score = 331 bits (848), Expect = 8e-88
Identities = 175/364 (48%), Positives = 240/364 (65%), Gaps = 15/364 (4%)
Frame = -1
Query: 1158 LEFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWE 979
L+ KKVDILW + + S + SG +LRV S C FW LMD CL+I +IDWE
Sbjct: 985 LDVKKVDILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWE 1043
Query: 978 RSHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLN 799
RSHPD D + +GIDA W++F+NSL +AISD GK++LPEHL++ A+CLSATGEFV LN
Sbjct: 1044 RSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLN 1103
Query: 798 PRGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGF 619
+G+A Q++ T+I SPF Q CF +P CF+KA K D L GSL+AL+WG+ PS+G+G
Sbjct: 1104 AKGMARQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGG 1163
Query: 618 QFDILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEVK-PV-CRKS---------IASYHF 472
FDILY KGHE A ++Y LL + + N +VK P+ C ++ A+
Sbjct: 1164 HFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDS 1223
Query: 471 NSKGQKTL---LQKMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFH 301
SKG K+L + +L S+ I+K+S++LK IL++YP N +LS DK+T M+AL FH
Sbjct: 1224 ASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFH 1283
Query: 300 PKLQDKYGTGISDIKVGRHPEY-KENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKT 124
P+ +K G G +IKV H +Y CF LVRTDG+EEDFSYHKC++ ALE+I P +A++
Sbjct: 1284 PRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARS 1343
Query: 123 NRSK 112
+S+
Sbjct: 1344 YQSR 1347
>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
vinifera]
Length = 1458
Score = 331 bits (848), Expect = 8e-88
Identities = 175/364 (48%), Positives = 240/364 (65%), Gaps = 15/364 (4%)
Frame = -1
Query: 1158 LEFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWE 979
L+ KKVDILW + + S + SG +LRV S C FW LMD CL+I +IDWE
Sbjct: 1089 LDVKKVDILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWE 1147
Query: 978 RSHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLN 799
RSHPD D + +GIDA W++F+NSL +AISD GK++LPEHL++ A+CLSATGEFV LN
Sbjct: 1148 RSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLN 1207
Query: 798 PRGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGF 619
+G+A Q++ T+I SPF Q CF +P CF+KA K D L GSL+AL+WG+ PS+G+G
Sbjct: 1208 AKGMARQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGG 1267
Query: 618 QFDILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEVK-PV-CRKS---------IASYHF 472
FDILY KGHE A ++Y LL + + N +VK P+ C ++ A+
Sbjct: 1268 HFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDS 1327
Query: 471 NSKGQKTL---LQKMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFH 301
SKG K+L + +L S+ I+K+S++LK IL++YP N +LS DK+T M+AL FH
Sbjct: 1328 ASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFH 1387
Query: 300 PKLQDKYGTGISDIKVGRHPEY-KENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKT 124
P+ +K G G +IKV H +Y CF LVRTDG+EEDFSYHKC++ ALE+I P +A++
Sbjct: 1388 PRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARS 1447
Query: 123 NRSK 112
+S+
Sbjct: 1448 YQSR 1451
>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
vinifera]
Length = 1460
Score = 331 bits (848), Expect = 8e-88
Identities = 175/364 (48%), Positives = 240/364 (65%), Gaps = 15/364 (4%)
Frame = -1
Query: 1158 LEFKKVDILWKERSNYSKFPRCPSGEPFLRVVTSKYCDVTKFWSTLMDKCLRIRSIIDWE 979
L+ KKVDILW + + S + SG +LRV S C FW LMD CL+I +IDWE
Sbjct: 1091 LDVKKVDILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWE 1149
Query: 978 RSHPDLHLDYYEAFGIDAAWQFFVNSLHAAISDTGKSILPEHLVVAANCLSATGEFVPLN 799
RSHPD D + +GIDA W++F+NSL +AISD GK++LPEHL++ A+CLSATGEFV LN
Sbjct: 1150 RSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLN 1209
Query: 798 PRGLAHQRKETNIYSPFSQACFLNPSDCFVKAAKAEQLDGLRGSLEALSWGQTPSIGTGF 619
+G+A Q++ T+I SPF Q CF +P CF+KA K D L GSL+AL+WG+ PS+G+G
Sbjct: 1210 AKGMARQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGG 1269
Query: 618 QFDILYKGKGHEPAERTNVYTLLSNHVRSAKTNTEVK-PV-CRKS---------IASYHF 472
FDILY KGHE A ++Y LL + + N +VK P+ C ++ A+
Sbjct: 1270 HFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDS 1329
Query: 471 NSKGQKTL---LQKMLSQHFSVVGIKKVSQKLKRILKEYPTNRRLSGEDKSTAMIALKFH 301
SKG K+L + +L S+ I+K+S++LK IL++YP N +LS DK+T M+AL FH
Sbjct: 1330 ASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFH 1389
Query: 300 PKLQDKYGTGISDIKVGRHPEY-KENCFFLVRTDGSEEDFSYHKCINHALEMISPEKAKT 124
P+ +K G G +IKV H +Y CF LVRTDG+EEDFSYHKC++ ALE+I P +A++
Sbjct: 1390 PRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARS 1449
Query: 123 NRSK 112
+S+
Sbjct: 1450 YQSR 1453