BLASTX nr result
ID: Perilla23_contig00020572
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00020572
(583 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza] 325 1e-86
ref|XP_011081567.1| PREDICTED: RNA-dependent RNA polymerase 6 [S... 315 1e-83
ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [E... 305 1e-80
ref|XP_010515303.1| PREDICTED: RNA-dependent RNA polymerase 6 [C... 262 8e-68
ref|XP_010503609.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 262 8e-68
ref|XP_010503608.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 262 8e-68
emb|CBI21038.3| unnamed protein product [Vitis vinifera] 261 1e-67
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 261 1e-67
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 259 5e-67
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 257 3e-66
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 256 5e-66
ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [N... 256 8e-66
ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [P... 256 8e-66
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 256 8e-66
ref|XP_010531141.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 255 1e-65
ref|XP_010531140.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 255 1e-65
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 255 1e-65
ref|XP_010319120.1| PREDICTED: RNA-dependent RNA polymerase 6 is... 255 1e-65
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco... 255 1e-65
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 255 1e-65
>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
Length = 1195
Score = 325 bits (832), Expect = 1e-86
Identities = 156/194 (80%), Positives = 175/194 (90%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+VRDAY+ DYE SSQLTYP + I YDQ LE+ GS FIADAW+CKCSYDGQL GLLGQ
Sbjct: 996 YRRVRDAYNLDYEASSQLTYPAD-ISYDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQ 1054
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVNSEDEVVTGHIWSMP++SS+KQGELKERLKHAY+ALRKDYRKVFECM FDQL DH
Sbjct: 1055 YKVNSEDEVVTGHIWSMPKFSSKKQGELKERLKHAYNALRKDYRKVFECMAPGFDQLPDH 1114
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN+LYE+KASAWYQVTY ++WVKK+KE+Q++DD K TVLLSFAWIAADYLARIKIRRR
Sbjct: 1115 EKNVLYEQKASAWYQVTYQDNWVKKSKELQELDDSGK-TVLLSFAWIAADYLARIKIRRR 1173
Query: 42 KMENSISDKPIDSL 1
+MEN+IS KPIDSL
Sbjct: 1174 RMENAISGKPIDSL 1187
>ref|XP_011081567.1| PREDICTED: RNA-dependent RNA polymerase 6 [Sesamum indicum]
Length = 1205
Score = 315 bits (807), Expect = 1e-83
Identities = 147/194 (75%), Positives = 172/194 (88%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YRK++DAYDRD+E S + T+ ++I+YDQ+LE+ GS FI DAWNCKCSYDGQL+GLLGQ
Sbjct: 1005 YRKIKDAYDRDHEASREHTFASDDIIYDQDLEVTGSTGFIGDAWNCKCSYDGQLIGLLGQ 1064
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVN E+EVVTGHIWSMP+YSS+KQGELKERLKHAYS LRK++RKVFECMG +FDQL D
Sbjct: 1065 YKVNREEEVVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFECMGPEFDQLWDD 1124
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKNI+YE+KASAWYQVTY +SWVKK+KE+ VDD K +V+LSFAWIAADYLARIKI+RR
Sbjct: 1125 EKNIMYERKASAWYQVTYKDSWVKKSKELHAVDDAGK-SVMLSFAWIAADYLARIKIKRR 1183
Query: 42 KMENSISDKPIDSL 1
MENSIS KPIDSL
Sbjct: 1184 MMENSISTKPIDSL 1197
>ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [Erythranthe guttatus]
gi|604300451|gb|EYU20269.1| hypothetical protein
MIMGU_mgv1a000386mg [Erythranthe guttata]
Length = 1196
Score = 305 bits (781), Expect = 1e-80
Identities = 150/194 (77%), Positives = 171/194 (88%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YRK++D+ + DYEESS+ T NI YDQ LEIAGS SFI DAWNCKCSYDGQL GLLGQ
Sbjct: 998 YRKIKDS-NYDYEESSENT--SVNIAYDQELEIAGSESFITDAWNCKCSYDGQLTGLLGQ 1054
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVNSE+EVVTGHIWSMP+YSS+KQGELKERLKHAYS LRKD+RKVFE M ++FDQLSD
Sbjct: 1055 YKVNSEEEVVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKDFRKVFESMDAEFDQLSDD 1114
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN ++E+KASAWYQVTY+ESWVKK+K++Q VDD TV+LSFAWIAADYLARIKIRRR
Sbjct: 1115 EKNTMFERKASAWYQVTYNESWVKKSKDLQVVDDEVGKTVMLSFAWIAADYLARIKIRRR 1174
Query: 42 KMENSISDKPIDSL 1
+MEN+IS KPIDSL
Sbjct: 1175 RMENAISMKPIDSL 1188
>ref|XP_010515303.1| PREDICTED: RNA-dependent RNA polymerase 6 [Camelina sativa]
Length = 1197
Score = 262 bits (670), Expect = 8e-68
Identities = 125/194 (64%), Positives = 151/194 (77%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V+ YD D E SS+ P +I YD +LEI G A I +AW KCSYDGQL+GLLGQ
Sbjct: 996 YRRVKQVYDEDAEASSEEIPDPSDIPYDTDLEIPGFAELIPEAWGHKCSYDGQLIGLLGQ 1055
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKV E+E+VTGHIWSMP+Y+S+KQGELKERLKH+Y++L+K++RKVFE D + LSD
Sbjct: 1056 YKVQKEEEIVTGHIWSMPKYASKKQGELKERLKHSYNSLKKEFRKVFEETIPDQENLSDE 1115
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKNILYEKKASAWY VTYH WVKK+ E+Q D+ V+LSFAWIAADYLARIK+R R
Sbjct: 1116 EKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSSHAVMLSFAWIAADYLARIKVRSR 1175
Query: 42 KMENSISDKPIDSL 1
+MEN S KP+DSL
Sbjct: 1176 EMENIDSAKPVDSL 1189
>ref|XP_010503609.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Camelina
sativa]
Length = 1105
Score = 262 bits (670), Expect = 8e-68
Identities = 126/194 (64%), Positives = 151/194 (77%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V++ YD D E SS+ P +I YD +LEI G A I +AW KCSYDGQL+GLLGQ
Sbjct: 904 YRRVKEVYDEDAEASSEEIPDPSDIPYDTDLEIPGFADLIPEAWGHKCSYDGQLIGLLGQ 963
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKV E+E+VTGHIWSMPRY+S+KQGELKERLKH+Y++L+K++RKVFE D + LSD
Sbjct: 964 YKVQKEEEIVTGHIWSMPRYASKKQGELKERLKHSYNSLKKEFRKVFEGTIPDQENLSDE 1023
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKNILYEKKASAWY VTYH WVKK+ E+Q D+ V+LSFAWIAADYLARIKIR R
Sbjct: 1024 EKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSSHAVMLSFAWIAADYLARIKIRSR 1083
Query: 42 KMENSISDKPIDSL 1
+M N S KP+DSL
Sbjct: 1084 EMGNIDSAKPVDSL 1097
>ref|XP_010503608.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Camelina
sativa]
Length = 1197
Score = 262 bits (670), Expect = 8e-68
Identities = 126/194 (64%), Positives = 151/194 (77%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V++ YD D E SS+ P +I YD +LEI G A I +AW KCSYDGQL+GLLGQ
Sbjct: 996 YRRVKEVYDEDAEASSEEIPDPSDIPYDTDLEIPGFADLIPEAWGHKCSYDGQLIGLLGQ 1055
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKV E+E+VTGHIWSMPRY+S+KQGELKERLKH+Y++L+K++RKVFE D + LSD
Sbjct: 1056 YKVQKEEEIVTGHIWSMPRYASKKQGELKERLKHSYNSLKKEFRKVFEGTIPDQENLSDE 1115
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKNILYEKKASAWY VTYH WVKK+ E+Q D+ V+LSFAWIAADYLARIKIR R
Sbjct: 1116 EKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSSHAVMLSFAWIAADYLARIKIRSR 1175
Query: 42 KMENSISDKPIDSL 1
+M N S KP+DSL
Sbjct: 1176 EMGNIDSAKPVDSL 1189
>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
Length = 1035
Score = 261 bits (668), Expect = 1e-67
Identities = 125/194 (64%), Positives = 154/194 (79%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+++DAY+ D ESS+ + + + +D++L I GSA FI DAW KCSYDGQL GLLGQ
Sbjct: 834 YRQIKDAYNEDVSESSEQIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQ 893
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKV E+EVVTGH+WSMP+Y SRKQGEL ERLKHAYS+L+K++R++FE M SDFDQL+D
Sbjct: 894 YKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDD 953
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN LYE+KASAWYQVTYH +WVKK+ E+Q D+ V+LSFAWI ADYLARIKIRR+
Sbjct: 954 EKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLARIKIRRK 1013
Query: 42 KMENSISDKPIDSL 1
N S KPI+SL
Sbjct: 1014 GTGNVDSSKPINSL 1027
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
gi|731385864|ref|XP_010648660.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
gi|731385866|ref|XP_010648661.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 261 bits (668), Expect = 1e-67
Identities = 125/194 (64%), Positives = 154/194 (79%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+++DAY+ D ESS+ + + + +D++L I GSA FI DAW KCSYDGQL GLLGQ
Sbjct: 996 YRQIKDAYNEDVSESSEQIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQ 1055
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKV E+EVVTGH+WSMP+Y SRKQGEL ERLKHAYS+L+K++R++FE M SDFDQL+D
Sbjct: 1056 YKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDD 1115
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN LYE+KASAWYQVTYH +WVKK+ E+Q D+ V+LSFAWI ADYLARIKIRR+
Sbjct: 1116 EKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLARIKIRRK 1175
Query: 42 KMENSISDKPIDSL 1
N S KPI+SL
Sbjct: 1176 GTGNVDSSKPINSL 1189
>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 259 bits (663), Expect = 5e-67
Identities = 128/194 (65%), Positives = 153/194 (78%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V+D D + E S+ L P++I YD LEI GS +FI DAWN KCSYDGQL GLLGQ
Sbjct: 997 YRQVKDVCDAEGEVSAGLEVVPKDIPYDSTLEILGSTAFIDDAWNSKCSYDGQLHGLLGQ 1056
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVN E+EVVTGHIWSMP+YS++KQGELKERLKHAY+ LRK++R VFE M DFD L D
Sbjct: 1057 YKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDD 1116
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN +YE+KASAWYQVTYH WV ++ E+ Q+ D TV+LSFAWIAADYLARIKIR R
Sbjct: 1117 EKNDMYERKASAWYQVTYHPHWVARSLEL-QLPDAVSNTVMLSFAWIAADYLARIKIRHR 1175
Query: 42 KMENSISDKPIDSL 1
+++ S S KPI+SL
Sbjct: 1176 RLQYSDSTKPINSL 1189
>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 257 bits (657), Expect = 3e-66
Identities = 128/194 (65%), Positives = 152/194 (78%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V+D D + E S+ L P++I YD LEI GS +FI DAWN KCSYDGQL GLLGQ
Sbjct: 997 YRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQ 1056
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVN E+EVVTGHIWSMP+YS++KQGELKERLKHAY+ LRK++R VFE M DFD L D
Sbjct: 1057 YKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDD 1116
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN +YE+KASAWYQVTYH WV ++ E+ Q+ D +TV+LSFAWIAADYLARIKIR R
Sbjct: 1117 EKNDMYERKASAWYQVTYHPHWVARSLEL-QIPDAVSSTVMLSFAWIAADYLARIKIRHR 1175
Query: 42 KMENSISDKPIDSL 1
+ S S KPI+SL
Sbjct: 1176 GLPYSDSTKPINSL 1189
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1200
Score = 256 bits (655), Expect = 5e-66
Identities = 124/196 (63%), Positives = 157/196 (80%), Gaps = 2/196 (1%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+++DAYD D SS+L P +I YD +LE+ G++ +I+DAW+ KCSYDGQL GLL Q
Sbjct: 1000 YRQIKDAYDEDVAASSELNLVPGDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQ 1059
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKV E+EVVTGHIWSMP+YSSRKQGELK+RLKH+Y++L+K++R++FE M +F+QL D
Sbjct: 1060 YKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDG 1119
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPD--KTTVLLSFAWIAADYLARIKIR 49
EKN LYE+KASAWYQV YH WVKK+ E+Q DPD T+V+LSFAWIAADYLARIKIR
Sbjct: 1120 EKNKLYEQKASAWYQVVYHPHWVKKSLELQ---DPDGAGTSVMLSFAWIAADYLARIKIR 1176
Query: 48 RRKMENSISDKPIDSL 1
R+ N S KP++SL
Sbjct: 1177 HRETGNVDSAKPVNSL 1192
>ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
Length = 1197
Score = 256 bits (653), Expect = 8e-66
Identities = 127/194 (65%), Positives = 153/194 (78%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V+D D + E S+ L P +I YD +LEI GS +FI DAWN KCSYDGQL GLLGQ
Sbjct: 997 YRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQ 1056
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVN E+EVVTGHIWSMP+YS++KQGELKERLKHAY+ LRK++R VFE M DFD L D
Sbjct: 1057 YKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDD 1116
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN +YE+KASAWYQVTY+ WV ++ E+ Q+ D +TV+LSFAWIAADYLARIKIR R
Sbjct: 1117 EKNDMYERKASAWYQVTYNPHWVARSLEL-QLPDAISSTVMLSFAWIAADYLARIKIRHR 1175
Query: 42 KMENSISDKPIDSL 1
++ S S KPI+SL
Sbjct: 1176 GLQYSDSTKPINSL 1189
>ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
Length = 1196
Score = 256 bits (653), Expect = 8e-66
Identities = 120/194 (61%), Positives = 154/194 (79%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YRKVRDAYD D +S+L Y P +I YD +LE+ G+A FI DAW KCSYDGQL GL+GQ
Sbjct: 995 YRKVRDAYDEDAATTSELHYVPSDIPYDMDLEVPGAADFIFDAWEKKCSYDGQLKGLMGQ 1054
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKV E+E+VTGH+WS+P+ +S+KQGELKERL H+Y+AL+K++R++FE + S+ + L+D
Sbjct: 1055 YKVKREEEIVTGHVWSIPKSNSKKQGELKERLSHSYNALKKEFRQMFENLDSNLEALTDD 1114
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKNIL EKKASAWYQVTYH WVK++ +Q+ D P V+LSFAWIAADYLARIKI+ R
Sbjct: 1115 EKNILCEKKASAWYQVTYHPKWVKQSPPLQEPDGPGDVVVMLSFAWIAADYLARIKIKCR 1174
Query: 42 KMENSISDKPIDSL 1
+E+ S KPI+SL
Sbjct: 1175 GVEHIDSTKPINSL 1188
>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Length = 1197
Score = 256 bits (653), Expect = 8e-66
Identities = 126/194 (64%), Positives = 152/194 (78%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V+D D + E S+ L P +I YD +LEI GS F+ DAWNCKCSYDGQL GLLGQ
Sbjct: 997 YRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTVFMGDAWNCKCSYDGQLHGLLGQ 1056
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVN E+EVVTGHIWSMP+YS++KQGELKERLKHAY+ LRK++R VFE M DFD L D
Sbjct: 1057 YKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFRNVFERMDPDFDLLPDD 1116
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN +YE+KASAWYQVTY+ WV ++ E+ Q+ D +TV+LSFAWIAADYLARI IR R
Sbjct: 1117 EKNDMYERKASAWYQVTYNPHWVARSLEL-QLPDAVSSTVMLSFAWIAADYLARINIRHR 1175
Query: 42 KMENSISDKPIDSL 1
++ S S KPI+SL
Sbjct: 1176 GLQYSDSTKPINSL 1189
>ref|XP_010531141.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Tarenaya
hassleriana]
Length = 1195
Score = 255 bits (652), Expect = 1e-65
Identities = 118/194 (60%), Positives = 151/194 (77%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YRK++D YD D SS++ P +I YD +LEI+G A F+ +AWN KCSYDGQL+GLLGQ
Sbjct: 994 YRKIKDVYDEDATVSSEINSGPRDIPYDTDLEISGFADFVPEAWNHKCSYDGQLMGLLGQ 1053
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKV E+E+VTGHIWSMP+Y+SRKQGELKERLKH+Y+AL+K+++K+F+ + + LSD
Sbjct: 1054 YKVQKEEEIVTGHIWSMPKYTSRKQGELKERLKHSYTALKKEFKKLFDKTDPEHENLSDE 1113
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN++YEKKASAWY VTYH WV K+ ++QQ D TV+LSFAWIAADYLARIKIR +
Sbjct: 1114 EKNLMYEKKASAWYHVTYHPEWVNKSLKLQQDPDASGNTVMLSFAWIAADYLARIKIRSQ 1173
Query: 42 KMENSISDKPIDSL 1
E KP++SL
Sbjct: 1174 GKETFDVGKPVNSL 1187
>ref|XP_010531140.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Tarenaya
hassleriana]
Length = 1208
Score = 255 bits (652), Expect = 1e-65
Identities = 118/194 (60%), Positives = 151/194 (77%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YRK++D YD D SS++ P +I YD +LEI+G A F+ +AWN KCSYDGQL+GLLGQ
Sbjct: 1007 YRKIKDVYDEDATVSSEINSGPRDIPYDTDLEISGFADFVPEAWNHKCSYDGQLMGLLGQ 1066
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKV E+E+VTGHIWSMP+Y+SRKQGELKERLKH+Y+AL+K+++K+F+ + + LSD
Sbjct: 1067 YKVQKEEEIVTGHIWSMPKYTSRKQGELKERLKHSYTALKKEFKKLFDKTDPEHENLSDE 1126
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN++YEKKASAWY VTYH WV K+ ++QQ D TV+LSFAWIAADYLARIKIR +
Sbjct: 1127 EKNLMYEKKASAWYHVTYHPEWVNKSLKLQQDPDASGNTVMLSFAWIAADYLARIKIRSQ 1186
Query: 42 KMENSISDKPIDSL 1
E KP++SL
Sbjct: 1187 GKETFDVGKPVNSL 1200
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 255 bits (652), Expect = 1e-65
Identities = 127/194 (65%), Positives = 153/194 (78%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V+D D + E S+ L P +I YD +LEI GS +FI DAWN KCSYDGQL GLLGQ
Sbjct: 997 YRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQ 1056
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVN E+EVVTGHIWSMP+YS++KQGELKERLKHAY+ LRK++R VFE M DFD L D
Sbjct: 1057 YKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDD 1116
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN +YE+KASAWYQVTY+ WV ++ E+ Q+ D +TV+LSFAWIAADYLARIKIR R
Sbjct: 1117 EKNDMYERKASAWYQVTYNPHWVARSLEL-QLPDAVSSTVMLSFAWIAADYLARIKIRHR 1175
Query: 42 KMENSISDKPIDSL 1
++ S S KPI+SL
Sbjct: 1176 GLQYSDSTKPINSL 1189
>ref|XP_010319120.1| PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Solanum
lycopersicum] gi|723688503|ref|XP_010319121.1| PREDICTED:
RNA-dependent RNA polymerase 6 isoform X1 [Solanum
lycopersicum]
Length = 1197
Score = 255 bits (651), Expect = 1e-65
Identities = 128/194 (65%), Positives = 150/194 (77%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V D YD + ESS L Y P++I YD NLEI G FI DAWN KCSYDGQL GLLGQ
Sbjct: 997 YRQVIDVYDAEGGESSGLEYVPKDIPYDTNLEIPGYEDFIDDAWNHKCSYDGQLNGLLGQ 1056
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVN E+EVVTGHIWSMP+YS++KQGELKERLKHAY+ LRK++R VFE M DFD L
Sbjct: 1057 YKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFRNVFEQMEPDFDLLPID 1116
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN +YE+KA AWY+VTYH WV ++ E+ Q+ D V+LSFAWIAADY+ARIKIR+R
Sbjct: 1117 EKNDMYERKAFAWYRVTYHPHWVTRSLEL-QLPDAVSNGVMLSFAWIAADYIARIKIRQR 1175
Query: 42 KMENSISDKPIDSL 1
M+N S KPIDSL
Sbjct: 1176 GMQNFDSTKPIDSL 1189
>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
6 [Solanum lycopersicum]
Length = 1197
Score = 255 bits (651), Expect = 1e-65
Identities = 128/194 (65%), Positives = 150/194 (77%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V D YD + ESS L Y P++I YD NLEI G FI DAWN KCSYDGQL GLLGQ
Sbjct: 997 YRQVIDVYDAEGGESSGLEYVPKDIPYDTNLEIPGYEDFIDDAWNHKCSYDGQLNGLLGQ 1056
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVN E+EVVTGHIWSMP+YS++KQGELKERLKHAY+ LRK++R VFE M DFD L
Sbjct: 1057 YKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFRNVFEQMEPDFDLLPID 1116
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN +YE+KA AWY+VTYH WV ++ E+ Q+ D V+LSFAWIAADY+ARIKIR+R
Sbjct: 1117 EKNDMYERKAFAWYRVTYHPHWVTRSLEL-QLPDAVSNGVMLSFAWIAADYIARIKIRQR 1175
Query: 42 KMENSISDKPIDSL 1
M+N S KPIDSL
Sbjct: 1176 GMQNFDSTKPIDSL 1189
>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 255 bits (651), Expect = 1e-65
Identities = 126/194 (64%), Positives = 153/194 (78%)
Frame = -2
Query: 582 YRKVRDAYDRDYEESSQLTYPPENIVYDQNLEIAGSASFIADAWNCKCSYDGQLVGLLGQ 403
YR+V+D D + E S+ L P++I YD LEI GS +FI DAWN KCSYDGQL GLLGQ
Sbjct: 997 YRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQ 1056
Query: 402 YKVNSEDEVVTGHIWSMPRYSSRKQGELKERLKHAYSALRKDYRKVFECMGSDFDQLSDH 223
YKVN E+EVVTG+IWSMP+Y+++KQGELKERLKHAY+ LRK++R VFE M DFD L D
Sbjct: 1057 YKVNREEEVVTGYIWSMPKYNAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDD 1116
Query: 222 EKNILYEKKASAWYQVTYHESWVKKAKEIQQVDDPDKTTVLLSFAWIAADYLARIKIRRR 43
EKN +YE+KASAWYQVTYH WV ++ E+ Q+ D TV+LSFAWIAADYLARIKIR R
Sbjct: 1117 EKNDMYERKASAWYQVTYHPHWVARSLEL-QLADAVSNTVMLSFAWIAADYLARIKIRHR 1175
Query: 42 KMENSISDKPIDSL 1
+++ S S KPI+SL
Sbjct: 1176 RLQYSDSTKPINSL 1189