BLASTX nr result
ID: Perilla23_contig00020264
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00020264
(571 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011076392.1| PREDICTED: DNA-directed RNA polymerase III s... 145 1e-32
ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971... 138 2e-30
ref|XP_009607010.1| PREDICTED: DNA-directed RNA polymerase III s... 126 6e-27
ref|XP_009607009.1| PREDICTED: DNA-directed RNA polymerase III s... 126 6e-27
emb|CDP05351.1| unnamed protein product [Coffea canephora] 125 1e-26
ref|XP_010270534.1| PREDICTED: uncharacterized protein LOC104606... 125 1e-26
ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III s... 124 4e-26
ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III s... 124 4e-26
ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu... 122 9e-26
ref|XP_007038340.1| DNA binding protein, putative isoform 2 [The... 122 9e-26
ref|XP_007038339.1| DNA binding protein, putative isoform 1 [The... 122 9e-26
ref|XP_010274963.1| PREDICTED: DNA-directed RNA polymerase III s... 122 1e-25
ref|XP_011470060.1| PREDICTED: DNA-directed RNA polymerase III s... 122 2e-25
ref|XP_011470059.1| PREDICTED: DNA-directed RNA polymerase III s... 122 2e-25
ref|XP_010258842.1| PREDICTED: DNA-directed RNA polymerase III s... 121 3e-25
ref|XP_010656128.1| PREDICTED: uncharacterized protein LOC100256... 120 5e-25
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera] 120 5e-25
ref|XP_011094009.1| PREDICTED: DNA-directed RNA polymerase III s... 119 8e-25
ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III s... 119 1e-24
ref|XP_012090467.1| PREDICTED: DNA-directed RNA polymerase III s... 118 2e-24
>ref|XP_011076392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like
[Sesamum indicum] gi|747059973|ref|XP_011076393.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc4-like [Sesamum indicum]
gi|747059975|ref|XP_011076394.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc4-like [Sesamum indicum]
Length = 366
Score = 145 bits (366), Expect = 1e-32
Identities = 82/154 (53%), Positives = 95/154 (61%), Gaps = 32/154 (20%)
Frame = -3
Query: 569 FMLPSNLPLGGQSTNAHRRGT----------------------------NGNSNGIKGKE 474
F P NLPLG + T ++R T +G S G KGK+
Sbjct: 208 FQFPPNLPLGRRQTGTNKRDTANDLKALECGVFSAASKGKEIVGCGPRVSGISMGTKGKD 267
Query: 473 IVGSS----SGYPLKKDDSLEELPEGYMGKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQ 306
I +S SG+P K SLEELPEGYMGKMLVYKSGAVKLKLGDI+YDVSPG+DC F Q
Sbjct: 268 IAPNSINLVSGHPSNKGCSLEELPEGYMGKMLVYKSGAVKLKLGDILYDVSPGSDCTFAQ 327
Query: 305 KVMAINATDKHCCDLGEGNKRAFVTPDIDSLLLN 204
VMAI+ T++ CCDLG NKRA VTPDID L+ N
Sbjct: 328 SVMAIDTTNRDCCDLGALNKRAVVTPDIDFLVDN 361
>ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971930 [Erythranthe
guttatus] gi|604305879|gb|EYU24936.1| hypothetical
protein MIMGU_mgv1a009918mg [Erythranthe guttata]
Length = 327
Score = 138 bits (347), Expect = 2e-30
Identities = 72/133 (54%), Positives = 90/133 (67%), Gaps = 6/133 (4%)
Frame = -3
Query: 569 FMLPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGY------PLKKDDSLEELPEG 408
F PSNLP G ++ + KGKEI G++S P K+ LEELP+G
Sbjct: 203 FQFPSNLPTGKRAAS-------------KGKEIAGTNSRILATSINPPKEGSRLEELPDG 249
Query: 407 YMGKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTP 228
YMGKMLVYKSGAVKLKLG ++YDVSPG+DC F Q V+A+N TD CC++GE NKRA VTP
Sbjct: 250 YMGKMLVYKSGAVKLKLGGVLYDVSPGSDCMFSQSVVAVNTTDGSCCEVGEVNKRAIVTP 309
Query: 227 DIDSLLLNEDPSN 189
DI SLL++ + +N
Sbjct: 310 DIGSLLVDNNNNN 322
>ref|XP_009607010.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X2 [Nicotiana tomentosiformis]
Length = 357
Score = 126 bits (317), Expect = 6e-27
Identities = 76/143 (53%), Positives = 88/143 (61%), Gaps = 18/143 (12%)
Frame = -3
Query: 563 LPSNLPL---GGQST-----NAHRRGTNGNSNG------IKGKEIVGSSS----GYPLKK 438
LP+NLPL GG+ T + +G KGKEIV SS+ K+
Sbjct: 215 LPANLPLATKGGRDTAGCLSSPMLKGKEATGTAPRLLASAKGKEIVDSSTISRRHNTAKE 274
Query: 437 DDSLEELPEGYMGKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLG 258
SLE LP G MGKMLVYKSGA+KLKLGDI+YDVSPG DC F Q V+AIN +KHCC LG
Sbjct: 275 ACSLEGLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVEKHCCQLG 334
Query: 257 EGNKRAFVTPDIDSLLLNEDPSN 189
E KRA VTPD+D LL N +N
Sbjct: 335 EIGKRAVVTPDVDFLLNNRFRAN 357
>ref|XP_009607009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X1 [Nicotiana tomentosiformis]
Length = 358
Score = 126 bits (317), Expect = 6e-27
Identities = 76/143 (53%), Positives = 88/143 (61%), Gaps = 18/143 (12%)
Frame = -3
Query: 563 LPSNLPL---GGQST-----NAHRRGTNGNSNG------IKGKEIVGSSS----GYPLKK 438
LP+NLPL GG+ T + +G KGKEIV SS+ K+
Sbjct: 216 LPANLPLATKGGRDTAGCLSSPMLKGKEATGTAPRLLASAKGKEIVDSSTISRRHNTAKE 275
Query: 437 DDSLEELPEGYMGKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLG 258
SLE LP G MGKMLVYKSGA+KLKLGDI+YDVSPG DC F Q V+AIN +KHCC LG
Sbjct: 276 ACSLEGLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVEKHCCQLG 335
Query: 257 EGNKRAFVTPDIDSLLLNEDPSN 189
E KRA VTPD+D LL N +N
Sbjct: 336 EIGKRAVVTPDVDFLLNNRFRAN 358
>emb|CDP05351.1| unnamed protein product [Coffea canephora]
Length = 380
Score = 125 bits (315), Expect = 1e-26
Identities = 64/99 (64%), Positives = 77/99 (77%), Gaps = 3/99 (3%)
Frame = -3
Query: 497 SNGIKGKEIVGSSSGYPL---KKDDSLEELPEGYMGKMLVYKSGAVKLKLGDIMYDVSPG 327
S KGKEIV SS + K SLEELP G+MGK+LV+KSGAVKLKLGD++YDVSPG
Sbjct: 275 SGDAKGKEIVNSSVSSVVGTNKNVCSLEELPPGFMGKILVFKSGAVKLKLGDMLYDVSPG 334
Query: 326 ADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDSLL 210
++C F Q ++AIN +DKHCC+LGE +KRA VTPDID LL
Sbjct: 335 SNCTFAQDIVAINTSDKHCCNLGEVSKRAVVTPDIDHLL 373
>ref|XP_010270534.1| PREDICTED: uncharacterized protein LOC104606837 [Nelumbo nucifera]
Length = 302
Score = 125 bits (314), Expect = 1e-26
Identities = 67/118 (56%), Positives = 81/118 (68%)
Frame = -3
Query: 563 LPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGYPLKKDDSLEELPEGYMGKMLVY 384
LPS+LPL +S + GTN +G G SS P K LEELP G+MGKMLVY
Sbjct: 186 LPSSLPLVKRSATTNNDGTNSGLKQFRG----GVSSEKPCK----LEELPVGFMGKMLVY 237
Query: 383 KSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDSLL 210
+SGA+KLKLGD +YDVS G +C F Q V+AIN +KHCC LGE NKRA +TP+IDS+L
Sbjct: 238 ESGAIKLKLGDTLYDVSSGMNCVFAQDVVAINTEEKHCCILGELNKRAVITPNIDSIL 295
>ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X2 [Nicotiana sylvestris]
Length = 355
Score = 124 bits (310), Expect = 4e-26
Identities = 74/138 (53%), Positives = 86/138 (62%), Gaps = 18/138 (13%)
Frame = -3
Query: 563 LPSNLPL---GGQST-----NAHRRGTNGNSNG------IKGKEIVGSSS----GYPLKK 438
LP NLPL GG+ T + +G KGKEIV SS+ K+
Sbjct: 215 LPVNLPLATKGGRDTAGCLPSPMLKGKEAAGTAPRLLASAKGKEIVDSSTISRRHNTAKE 274
Query: 437 DDSLEELPEGYMGKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLG 258
+LE+LP G MGKMLVYKSGA+KLKLGDI+YDVSPG DC F Q V+AIN +KHCC LG
Sbjct: 275 ACNLEKLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVEKHCCQLG 334
Query: 257 EGNKRAFVTPDIDSLLLN 204
E KRA VTPD+D LL N
Sbjct: 335 EIGKRAVVTPDVDFLLNN 352
>ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X1 [Nicotiana sylvestris]
Length = 356
Score = 124 bits (310), Expect = 4e-26
Identities = 74/138 (53%), Positives = 86/138 (62%), Gaps = 18/138 (13%)
Frame = -3
Query: 563 LPSNLPL---GGQST-----NAHRRGTNGNSNG------IKGKEIVGSSS----GYPLKK 438
LP NLPL GG+ T + +G KGKEIV SS+ K+
Sbjct: 216 LPVNLPLATKGGRDTAGCLPSPMLKGKEAAGTAPRLLASAKGKEIVDSSTISRRHNTAKE 275
Query: 437 DDSLEELPEGYMGKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLG 258
+LE+LP G MGKMLVYKSGA+KLKLGDI+YDVSPG DC F Q V+AIN +KHCC LG
Sbjct: 276 ACNLEKLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVEKHCCQLG 335
Query: 257 EGNKRAFVTPDIDSLLLN 204
E KRA VTPD+D LL N
Sbjct: 336 EIGKRAVVTPDVDFLLNN 353
>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
gi|223550094|gb|EEF51581.1| DNA binding protein,
putative [Ricinus communis]
Length = 328
Score = 122 bits (307), Expect = 9e-26
Identities = 66/120 (55%), Positives = 78/120 (65%)
Frame = -3
Query: 569 FMLPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGYPLKKDDSLEELPEGYMGKML 390
F LP+ LPL +S +A + S +GK KK+ SL+ L GYMGKML
Sbjct: 210 FQLPAKLPLVKRSASAKGKEKAEGSIPSQGKNAA--------KKESSLDGLSAGYMGKML 261
Query: 389 VYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDSLL 210
VY+SGAVKLKLGD +YDVS G+DC F Q VMAIN KHCC +GE KRA VTPD+DSLL
Sbjct: 262 VYRSGAVKLKLGDTLYDVSQGSDCMFAQDVMAINTAAKHCCTIGELEKRAVVTPDVDSLL 321
>ref|XP_007038340.1| DNA binding protein, putative isoform 2 [Theobroma cacao]
gi|508775585|gb|EOY22841.1| DNA binding protein,
putative isoform 2 [Theobroma cacao]
Length = 328
Score = 122 bits (307), Expect = 9e-26
Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
Frame = -3
Query: 569 FMLPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGY-PLKKDDSLEELPEGYMGKM 393
F LP+NLP+ + + + G + E +GSS + LKK LEELP G+MGKM
Sbjct: 210 FQLPANLPVIKRLAS---------TKGKEKAENLGSSERFGALKKGCQLEELPGGFMGKM 260
Query: 392 LVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDSL 213
LVYKSGAVKLKLG+ +YDVSPG+DC F Q V A+N T+KHCC +GE KR VTPDI S+
Sbjct: 261 LVYKSGAVKLKLGETLYDVSPGSDCIFAQDVAAVNTTEKHCCVIGELGKRVVVTPDISSV 320
Query: 212 L 210
L
Sbjct: 321 L 321
>ref|XP_007038339.1| DNA binding protein, putative isoform 1 [Theobroma cacao]
gi|508775584|gb|EOY22840.1| DNA binding protein,
putative isoform 1 [Theobroma cacao]
Length = 359
Score = 122 bits (307), Expect = 9e-26
Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
Frame = -3
Query: 569 FMLPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGY-PLKKDDSLEELPEGYMGKM 393
F LP+NLP+ + + + G + E +GSS + LKK LEELP G+MGKM
Sbjct: 241 FQLPANLPVIKRLAS---------TKGKEKAENLGSSERFGALKKGCQLEELPGGFMGKM 291
Query: 392 LVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDSL 213
LVYKSGAVKLKLG+ +YDVSPG+DC F Q V A+N T+KHCC +GE KR VTPDI S+
Sbjct: 292 LVYKSGAVKLKLGETLYDVSPGSDCIFAQDVAAVNTTEKHCCVIGELGKRVVVTPDISSV 351
Query: 212 L 210
L
Sbjct: 352 L 352
>ref|XP_010274963.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like
[Nelumbo nucifera]
Length = 246
Score = 122 bits (306), Expect = 1e-25
Identities = 64/118 (54%), Positives = 78/118 (66%)
Frame = -3
Query: 563 LPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGYPLKKDDSLEELPEGYMGKMLVY 384
LPS+LPL +S A+ GTN + G +K LEELP G+MGKMLVY
Sbjct: 130 LPSSLPLVKRSATANNDGTNSGLKQFR--------DGVSSEKPCELEELPAGFMGKMLVY 181
Query: 383 KSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDSLL 210
+SG VKLKLGD +YDVS G +C F Q V+AIN +KHCC LGE NKRA +TP+IDS+L
Sbjct: 182 ESGVVKLKLGDTLYDVSSGMNCVFAQDVVAINTEEKHCCILGELNKRAVITPNIDSIL 239
>ref|XP_011470060.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X2
[Fragaria vesca subsp. vesca]
Length = 322
Score = 122 bits (305), Expect = 2e-25
Identities = 69/122 (56%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Frame = -3
Query: 563 LPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGYP----LKKDDSLEELPEGYMGK 396
LP LPL +ST+A KGKE VGSS+ KK LEEL EGYMGK
Sbjct: 206 LPPTLPLVKRSTSA------------KGKEKVGSSTPSEKVGAAKKSGGLEELSEGYMGK 253
Query: 395 MLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDS 216
MLVYKSGAVK KLGD +YDVSPG+DC F Q + AIN + CC LGE +R VTPD+DS
Sbjct: 254 MLVYKSGAVKFKLGDALYDVSPGSDCVFAQDIAAINTAARKCCVLGELGQRVVVTPDVDS 313
Query: 215 LL 210
LL
Sbjct: 314 LL 315
>ref|XP_011470059.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X1
[Fragaria vesca subsp. vesca]
Length = 323
Score = 122 bits (305), Expect = 2e-25
Identities = 69/122 (56%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Frame = -3
Query: 563 LPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGYP----LKKDDSLEELPEGYMGK 396
LP LPL +ST+A KGKE VGSS+ KK LEEL EGYMGK
Sbjct: 207 LPPTLPLVKRSTSA------------KGKEKVGSSTPSEKVGAAKKSGGLEELSEGYMGK 254
Query: 395 MLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDS 216
MLVYKSGAVK KLGD +YDVSPG+DC F Q + AIN + CC LGE +R VTPD+DS
Sbjct: 255 MLVYKSGAVKFKLGDALYDVSPGSDCVFAQDIAAINTAARKCCVLGELGQRVVVTPDVDS 314
Query: 215 LL 210
LL
Sbjct: 315 LL 316
>ref|XP_010258842.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Nelumbo
nucifera]
Length = 300
Score = 121 bits (303), Expect = 3e-25
Identities = 69/125 (55%), Positives = 83/125 (66%), Gaps = 6/125 (4%)
Frame = -3
Query: 563 LPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGYPLK------KDDSLEELPEGYM 402
LP +LPL +S +A KGK++ SS PLK + SLEELP G+M
Sbjct: 190 LPDSLPLVKRSASA------------KGKDMARSSK--PLKSVGAADQGCSLEELPPGFM 235
Query: 401 GKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDI 222
GKMLVYKSGAVKLKLG+ +YDVS G+DC F Q V+AIN D+HCC +GE KRA +TPD
Sbjct: 236 GKMLVYKSGAVKLKLGETLYDVSSGSDCIFAQDVVAINTEDRHCCVIGELYKRAIITPDF 295
Query: 221 DSLLL 207
DSLLL
Sbjct: 296 DSLLL 300
>ref|XP_010656128.1| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
Length = 315
Score = 120 bits (301), Expect = 5e-25
Identities = 67/131 (51%), Positives = 82/131 (62%), Gaps = 9/131 (6%)
Frame = -3
Query: 563 LPSNLPLGGQSTNAHRRGTN---------GNSNGIKGKEIVGSSSGYPLKKDDSLEELPE 411
LP+ +P+ Q+ A + G +N +K E GS ++K LEELP
Sbjct: 187 LPATMPMIKQAATAEVKENASSSKPPEDAGQANRLKPSEGAGS-----IQKTCRLEELPS 241
Query: 410 GYMGKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVT 231
G+MGKMLVYKSGA+KLKLGD +YDVSPG DC F Q V+AIN DK CC LGE KRA VT
Sbjct: 242 GFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELKKRAVVT 301
Query: 230 PDIDSLLLNED 198
PD+DS L + D
Sbjct: 302 PDVDSALSSMD 312
>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
Length = 348
Score = 120 bits (301), Expect = 5e-25
Identities = 69/131 (52%), Positives = 83/131 (63%), Gaps = 11/131 (8%)
Frame = -3
Query: 569 FMLPSNLPLGGQSTNAHRRGTNGNSNGI-------KGKEIVGSS----SGYPLKKDDSLE 423
F LP+NLPL QS +A + GNS + KGK++ SS S + LE
Sbjct: 211 FQLPANLPLVKQSASAKGKEIVGNSTSLEGIYASAKGKQVARSSLSSKSIGTSEHSCRLE 270
Query: 422 ELPEGYMGKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKR 243
+L G+ GKMLVYKSGA+KLKLG+I+YDVSPG DC Q V+AIN DKHC LGE KR
Sbjct: 271 DLAGGHXGKMLVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKHCYALGELGKR 330
Query: 242 AFVTPDIDSLL 210
VTPD+DSLL
Sbjct: 331 VIVTPDVDSLL 341
>ref|XP_011094009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Sesamum
indicum]
Length = 299
Score = 119 bits (299), Expect = 8e-25
Identities = 64/118 (54%), Positives = 78/118 (66%)
Frame = -3
Query: 563 LPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGYPLKKDDSLEELPEGYMGKMLVY 384
LPS LP QSTNA + +N KG E +K LE+LP G MGKMLVY
Sbjct: 184 LPSILPTTKQSTNAEVPEADKKANPGKGAEAS--------QKPCRLEDLPAGLMGKMLVY 235
Query: 383 KSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDSLL 210
+SGA+KLKLGD +YDVS G +C F Q V+AIN DKHCC++GE +KRA +TPD DS+L
Sbjct: 236 RSGAIKLKLGDTLYDVSAGLNCVFGQDVVAINTDDKHCCNMGEISKRAIITPDTDSML 293
>ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
[Solanum tuberosum]
Length = 368
Score = 119 bits (297), Expect = 1e-24
Identities = 62/101 (61%), Positives = 70/101 (69%), Gaps = 5/101 (4%)
Frame = -3
Query: 491 GIKGKEIVGSSS-----GYPLKKDDSLEELPEGYMGKMLVYKSGAVKLKLGDIMYDVSPG 327
G KGKEI S + K SL+ELP G MGKMLVYKSGA+KLKLGDI+YDVSPG
Sbjct: 266 GAKGKEIADSPTISRRHNNTTNKACSLQELPAGSMGKMLVYKSGAIKLKLGDILYDVSPG 325
Query: 326 ADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDIDSLLLN 204
+C F Q V+AIN +K CC LGE KRA VTPD+D LL N
Sbjct: 326 VECSFSQDVVAINTAEKQCCQLGELGKRAVVTPDVDFLLNN 366
>ref|XP_012090467.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X2
[Jatropha curcas]
Length = 341
Score = 118 bits (296), Expect = 2e-24
Identities = 66/124 (53%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Frame = -3
Query: 569 FMLPSNLPLGGQSTNAHRRGTNGNSNGIKGKEIVGSSSGYP----LKKDDSLEELPEGYM 402
F LPS LPL +S KGKE V S+ LKK+ S + L EGYM
Sbjct: 223 FQLPSKLPLVKRSAIT------------KGKEKVEGSTPSQGTSALKKESSFQGLSEGYM 270
Query: 401 GKMLVYKSGAVKLKLGDIMYDVSPGADCCFPQKVMAINATDKHCCDLGEGNKRAFVTPDI 222
GKMLVY+SGAVK+KLGD +YDVSPG+DC F Q +MAI+ K CC +G+ KRA VTPD+
Sbjct: 271 GKMLVYRSGAVKIKLGDTLYDVSPGSDCTFAQDLMAIDIASKQCCTIGKLRKRAVVTPDV 330
Query: 221 DSLL 210
DSLL
Sbjct: 331 DSLL 334