BLASTX nr result

ID: Perilla23_contig00020138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00020138
         (961 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012843655.1| PREDICTED: serine/arginine-rich splicing fac...    80   3e-12
ref|XP_009598444.1| PREDICTED: serine/arginine-rich splicing fac...    60   3e-06

>ref|XP_012843655.1| PREDICTED: serine/arginine-rich splicing factor RS40-like isoform
           X1 [Erythranthe guttatus]
          Length = 259

 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = -1

Query: 334 MLLPSYTFLRPLPFAFLMTLPTLQFPTCFNIDIMFIPDPVAG 209
           M+ PSYTFLR LPFAFLMTL +LQFPTCFNIDIMFIPDPVAG
Sbjct: 1   MVPPSYTFLRSLPFAFLMTLHSLQFPTCFNIDIMFIPDPVAG 42


>ref|XP_009598444.1| PREDICTED: serine/arginine-rich splicing factor RS41-like isoform
           X1 [Nicotiana tomentosiformis]
          Length = 283

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = -1

Query: 334 MLLPSYTFLRPLPFAFLMTLPTLQFPTCFNIDIMFIPDPVAGV 206
           M+L SY+ LRPLPFAFLMTL +  + TCFNID M I DPVA V
Sbjct: 1   MVLQSYSLLRPLPFAFLMTLLSPHYLTCFNIDSMIISDPVAAV 43


Top