BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00020133
         (385 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDO99545.1| unnamed protein product [Coffea canephora]            144   3e-32
ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II su...   142   8e-32
ref|XP_012091599.1| PREDICTED: DNA-directed RNA polymerase II su...   142   1e-31
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ...   142   1e-31
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su...   140   3e-31
ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II su...   140   4e-31
ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II su...   140   4e-31
ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su...   140   5e-31
ref|XP_011096303.1| PREDICTED: DNA-directed RNA polymerase II su...   139   8e-31
ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phas...   139   1e-30
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia...   139   1e-30
ref|XP_010108197.1| DNA-directed RNA polymerase II subunit [Moru...   138   1e-30
ref|XP_003589372.2| DNA-directed RNA polymerase subunit beta [Me...   138   1e-30
ref|XP_010057424.1| PREDICTED: DNA-directed RNA polymerase II su...   138   2e-30
gb|KCW74593.1| hypothetical protein EUGRSUZ_E03313 [Eucalyptus g...   138   2e-30
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh...   138   2e-30
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su...   137   2e-30
gb|KRH37433.1| hypothetical protein GLYMA_09G066000 [Glycine max]     137   3e-30
gb|KOM39913.1| hypothetical protein LR48_Vigan04g011100 [Vigna a...   137   3e-30
gb|KHN35874.1| DNA-directed RNA polymerase II subunit RPB2 [Glyc...   137   3e-30

>emb|CDO99545.1| unnamed protein product [Coffea canephora]
          Length = 1193

 Score =  144 bits (363), Expect = 3e-32
 Identities = 77/105 (73%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
 Frame = +2

Query: 77  MDMEDEYE--QDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQ 250
           MDMEDEYE  Q N EE++                   ITQEDAWAVISAYFEEKGLVRQQ
Sbjct: 1   MDMEDEYEDNQYNDEEEE-------------------ITQEDAWAVISAYFEEKGLVRQQ 41

Query: 251 LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ET+YKI
Sbjct: 42  LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETVYKI 86


>ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
           [Nicotiana sylvestris]
          Length = 1191

 Score =  142 bits (359), Expect = 8e-32
 Identities = 77/107 (71%), Positives = 80/107 (74%), Gaps = 4/107 (3%)
 Frame = +2

Query: 77  MDMEDEYEQ----DNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVR 244
           MDME+EYEQ    D+ EE+                    ITQEDAWAVISAYFEEKGLVR
Sbjct: 1   MDMEEEYEQQYNNDDDEEE--------------------ITQEDAWAVISAYFEEKGLVR 40

Query: 245 QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 41  QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 87


>ref|XP_012091599.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha
           curcas]
          Length = 1193

 Score =  142 bits (358), Expect = 1e-31
 Identities = 77/109 (70%), Positives = 80/109 (73%), Gaps = 6/109 (5%)
 Frame = +2

Query: 77  MDMEDEYEQ------DNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGL 238
           MD E EY+Q      D+GEE+                    ITQEDAWAVISAYFEEKGL
Sbjct: 1   MDDEHEYDQPLNDEEDDGEEE--------------------ITQEDAWAVISAYFEEKGL 40

Query: 239 VRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           VRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF ETIYKI
Sbjct: 41  VRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAETIYKI 89


>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
           gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
           Full=DNA-directed RNA polymerase II subunit RPB2;
           Short=RNA polymerase II subunit 2; Short=RNA polymerase
           II subunit B2; AltName: Full=DNA-directed RNA polymerase
           II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
           polymerase II subunit 2 [Solanum lycopersicum]
          Length = 1191

 Score =  142 bits (357), Expect = 1e-31
 Identities = 77/107 (71%), Positives = 79/107 (73%), Gaps = 4/107 (3%)
 Frame = +2

Query: 77  MDMEDEYEQ----DNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVR 244
           MDMEDEYE     D+ EE+                    ITQEDAWAVISAYFEEKGLVR
Sbjct: 1   MDMEDEYEPQYNVDDDEEE--------------------ITQEDAWAVISAYFEEKGLVR 40

Query: 245 QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 41  QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 87


>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Solanum tuberosum]
          Length = 1191

 Score =  140 bits (354), Expect = 3e-31
 Identities = 76/107 (71%), Positives = 79/107 (73%), Gaps = 4/107 (3%)
 Frame = +2

Query: 77  MDMEDEYEQ----DNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVR 244
           MD+EDEYE     D+ EE+                    ITQEDAWAVISAYFEEKGLVR
Sbjct: 1   MDLEDEYEPQYNVDDDEEE--------------------ITQEDAWAVISAYFEEKGLVR 40

Query: 245 QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 41  QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 87


>ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
           [Nicotiana tomentosiformis]
          Length = 1191

 Score =  140 bits (353), Expect = 4e-31
 Identities = 76/107 (71%), Positives = 79/107 (73%), Gaps = 4/107 (3%)
 Frame = +2

Query: 77  MDMEDEYEQ----DNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVR 244
           MD E+EYEQ    D+ EE+                    ITQEDAWAVISAYFEEKGLVR
Sbjct: 1   MDTEEEYEQQYNNDDDEEE--------------------ITQEDAWAVISAYFEEKGLVR 40

Query: 245 QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 41  QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 87


>ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Erythranthe
           guttatus] gi|604344639|gb|EYU43393.1| hypothetical
           protein MIMGU_mgv1a000385mg [Erythranthe guttata]
          Length = 1197

 Score =  140 bits (353), Expect = 4e-31
 Identities = 75/104 (72%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
 Frame = +2

Query: 77  MDMEDE-YEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQL 253
           MDM++E YEQ   +E+    +               ITQEDAWAVISAYFEEKGLVRQQL
Sbjct: 1   MDMDEEFYEQGYPDEEFEEED------------EEEITQEDAWAVISAYFEEKGLVRQQL 48

Query: 254 DSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           DSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF ETIYKI
Sbjct: 49  DSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAETIYKI 92


>ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Fragaria
           vesca subsp. vesca]
          Length = 1191

 Score =  140 bits (352), Expect = 5e-31
 Identities = 71/105 (67%), Positives = 79/105 (75%)
 Frame = +2

Query: 71  EKMDMEDEYEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQ 250
           E+ + E++Y  D+ E++                    ITQEDAWAVISAYFEEKGLVRQQ
Sbjct: 3   EEPEYEEQYNDDDDEDE--------------------ITQEDAWAVISAYFEEKGLVRQQ 42

Query: 251 LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           LDSFDEFIQNTMQEIVDE+ADIEIRPESQHNPGHQPDF ETIYKI
Sbjct: 43  LDSFDEFIQNTMQEIVDEAADIEIRPESQHNPGHQPDFAETIYKI 87


>ref|XP_011096303.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Sesamum
           indicum]
          Length = 1193

 Score =  139 bits (350), Expect = 8e-31
 Identities = 71/103 (68%), Positives = 78/103 (75%)
 Frame = +2

Query: 77  MDMEDEYEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQLD 256
           M+ E+ Y+QD  EE++                   ITQEDAW VISAYFEEKGLVRQQLD
Sbjct: 1   MEEEEYYDQDYNEEEE--------------DEDEEITQEDAWPVISAYFEEKGLVRQQLD 46

Query: 257 SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           SFDEFIQNTMQEIVDE+ADIEIRPESQHNPGHQP+F ETIYKI
Sbjct: 47  SFDEFIQNTMQEIVDEAADIEIRPESQHNPGHQPEFAETIYKI 89


>ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
           gi|561011794|gb|ESW10701.1| hypothetical protein
           PHAVU_009G230400g [Phaseolus vulgaris]
          Length = 1196

 Score =  139 bits (349), Expect = 1e-30
 Identities = 71/103 (68%), Positives = 78/103 (75%)
 Frame = +2

Query: 77  MDMEDEYEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQLD 256
           M++EDEYE+   E+++                   ITQEDAWAVISAYFEEKGLVRQQLD
Sbjct: 1   MELEDEYEEQMMEDEEEEDE---------------ITQEDAWAVISAYFEEKGLVRQQLD 45

Query: 257 SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D  ET+YKI
Sbjct: 46  SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDSAETVYKI 88


>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
          Length = 1195

 Score =  139 bits (349), Expect = 1e-30
 Identities = 74/105 (70%), Positives = 78/105 (74%), Gaps = 4/105 (3%)
 Frame = +2

Query: 83  MEDEYEQD----NGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQ 250
           ME+EYE+     N EE++                   ITQEDAWAVISAYFEEKGLVRQQ
Sbjct: 1   MEEEYEEQQYDMNNEEEEEEEE--------------EITQEDAWAVISAYFEEKGLVRQQ 46

Query: 251 LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 47  LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 91


>ref|XP_010108197.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
           gi|587931023|gb|EXC18122.1| DNA-directed RNA polymerase
           II subunit [Morus notabilis]
          Length = 1193

 Score =  138 bits (348), Expect = 1e-30
 Identities = 74/101 (73%), Positives = 78/101 (77%)
 Frame = +2

Query: 83  MEDEYEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQLDSF 262
           MED++E D     Q+Y +               ITQEDAWAVISAYFEEKGLVRQQLDSF
Sbjct: 1   MEDDHEYD-----QQYND--------DDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSF 47

Query: 263 DEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           DEFIQNTMQEIVDESADIEIRPESQHNPGHQ DFVETIYKI
Sbjct: 48  DEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFVETIYKI 88


>ref|XP_003589372.2| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|657401188|gb|AES59623.2| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1195

 Score =  138 bits (348), Expect = 1e-30
 Identities = 73/103 (70%), Positives = 77/103 (74%)
 Frame = +2

Query: 77  MDMEDEYEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQLD 256
           MD+E+E E D   E++                   ITQEDAWAVISAYFEEKGLVRQQLD
Sbjct: 3   MDLEEENEFDQQMEEE--------------DDEEEITQEDAWAVISAYFEEKGLVRQQLD 48

Query: 257 SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 49  SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 91


>ref|XP_010057424.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Eucalyptus
           grandis] gi|629109448|gb|KCW74594.1| hypothetical
           protein EUGRSUZ_E03313 [Eucalyptus grandis]
          Length = 1196

 Score =  138 bits (347), Expect = 2e-30
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +2

Query: 182 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 361
           ITQEDAWAVISAYFE+KGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD
Sbjct: 24  ITQEDAWAVISAYFEDKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 83

Query: 362 FVETIYKI 385
           F ETIYKI
Sbjct: 84  FAETIYKI 91


>gb|KCW74593.1| hypothetical protein EUGRSUZ_E03313 [Eucalyptus grandis]
          Length = 1197

 Score =  138 bits (347), Expect = 2e-30
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = +2

Query: 182 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 361
           ITQEDAWAVISAYFE+KGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD
Sbjct: 24  ITQEDAWAVISAYFEDKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 83

Query: 362 FVETIYKI 385
           F ETIYKI
Sbjct: 84  FAETIYKI 91


>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
          Length = 1200

 Score =  138 bits (347), Expect = 2e-30
 Identities = 74/112 (66%), Positives = 80/112 (71%), Gaps = 9/112 (8%)
 Frame = +2

Query: 77  MDMEDEY---------EQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEE 229
           MD+E+EY         E +N EE++                   I+QEDAWAVISAYFEE
Sbjct: 1   MDLEEEYYEQEYNNEAENENDEEEEE----------------EDISQEDAWAVISAYFEE 44

Query: 230 KGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           KGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QPDF ETIYKI
Sbjct: 45  KGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQPDFAETIYKI 96


>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Cicer
           arietinum]
          Length = 1194

 Score =  137 bits (346), Expect = 2e-30
 Identities = 72/103 (69%), Positives = 76/103 (73%)
 Frame = +2

Query: 77  MDMEDEYEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQLD 256
           +D E EY+Q   +E+                    ITQEDAWAVISAYFEEKGLVRQQLD
Sbjct: 3   LDEEQEYDQQMMDEED---------------DEEEITQEDAWAVISAYFEEKGLVRQQLD 47

Query: 257 SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 48  SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 90


>gb|KRH37433.1| hypothetical protein GLYMA_09G066000 [Glycine max]
          Length = 1039

 Score =  137 bits (345), Expect = 3e-30
 Identities = 72/103 (69%), Positives = 76/103 (73%)
 Frame = +2

Query: 77  MDMEDEYEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQLD 256
           MD+E+E E D    ++                   ITQEDAWAVISAYFEEKGLVRQQLD
Sbjct: 1   MDLEEEQEYDEQMMEEE-------------DDEEEITQEDAWAVISAYFEEKGLVRQQLD 47

Query: 257 SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 48  SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 90


>gb|KOM39913.1| hypothetical protein LR48_Vigan04g011100 [Vigna angularis]
          Length = 1197

 Score =  137 bits (345), Expect = 3e-30
 Identities = 73/105 (69%), Positives = 76/105 (72%)
 Frame = +2

Query: 71  EKMDMEDEYEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQ 250
           E+  MEDE ++D  E                      ITQEDAWAVISAYFEEKGLVRQQ
Sbjct: 10  EEQMMEDEEDEDEDE----------------------ITQEDAWAVISAYFEEKGLVRQQ 47

Query: 251 LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 48  LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 92


>gb|KHN35874.1| DNA-directed RNA polymerase II subunit RPB2 [Glycine soja]
          Length = 1192

 Score =  137 bits (345), Expect = 3e-30
 Identities = 72/103 (69%), Positives = 76/103 (73%)
 Frame = +2

Query: 77  MDMEDEYEQDNGEEQQRYTNVXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQLD 256
           MD+E+E E D    ++                   ITQEDAWAVISAYFEEKGLVRQQLD
Sbjct: 1   MDLEEEQEYDEQMMEEE-------------DDEEEITQEDAWAVISAYFEEKGLVRQQLD 47

Query: 257 SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKI 385
           SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI
Sbjct: 48  SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKI 90