BLASTX nr result

ID: Perilla23_contig00019028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00019028
         (318 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077103.1| PREDICTED: sister chromatid cohesion 1 prote...    84   3e-14
ref|XP_011084693.1| PREDICTED: sister chromatid cohesion 1 prote...    70   8e-10
ref|XP_011084692.1| PREDICTED: sister chromatid cohesion 1 prote...    70   8e-10
ref|XP_011084690.1| PREDICTED: sister chromatid cohesion 1 prote...    70   8e-10

>ref|XP_011077103.1| PREDICTED: sister chromatid cohesion 1 protein 4 [Sesamum indicum]
          Length = 1279

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 50/103 (48%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
 Frame = -3

Query: 292 DTSNQQKSCRGEPELASEDQDGHILRDPETQTCQGIIYSSGLNLDAHEEGTSTETIVLRP 113
           DTS QQKSC    E A E+Q G  L  PET  CQ    SS LNLDAH++  +++++VLRP
Sbjct: 442 DTSYQQKSCHDGSEAALENQVGSSLETPETVVCQETTDSSVLNLDAHDKEPASDSLVLRP 501

Query: 112 YNSVQEHTDLAKPAFCPSNDGDVK------ATDGAE*TAKLGQ 2
            NS  EH D+AKP F  S   DVK      AT+  E TA  G+
Sbjct: 502 CNSNLEHPDVAKPGFSKSTRADVKSDSAALATNEREETATQGE 544


>ref|XP_011084693.1| PREDICTED: sister chromatid cohesion 1 protein 4-like isoform X3
           [Sesamum indicum]
          Length = 1274

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 37/83 (44%), Positives = 52/83 (62%)
 Frame = -3

Query: 286 SNQQKSCRGEPELASEDQDGHILRDPETQTCQGIIYSSGLNLDAHEEGTSTETIVLRPYN 107
           +NQ+KSC    +LASE+QD  + ++PETQTC     SS LNLD  E+  S+ET+ +RP N
Sbjct: 451 TNQEKSCPDVSDLASENQDVSLRQEPETQTCHEPTDSSSLNLDVREKVVSSETMFVRPSN 510

Query: 106 SVQEHTDLAKPAFCPSNDGDVKA 38
           S  E  D+   +   S D DV++
Sbjct: 511 SDIEQPDMMTSSCGMSRDADVQS 533


>ref|XP_011084692.1| PREDICTED: sister chromatid cohesion 1 protein 4-like isoform X2
           [Sesamum indicum]
          Length = 1276

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 37/83 (44%), Positives = 52/83 (62%)
 Frame = -3

Query: 286 SNQQKSCRGEPELASEDQDGHILRDPETQTCQGIIYSSGLNLDAHEEGTSTETIVLRPYN 107
           +NQ+KSC    +LASE+QD  + ++PETQTC     SS LNLD  E+  S+ET+ +RP N
Sbjct: 453 TNQEKSCPDVSDLASENQDVSLRQEPETQTCHEPTDSSSLNLDVREKVVSSETMFVRPSN 512

Query: 106 SVQEHTDLAKPAFCPSNDGDVKA 38
           S  E  D+   +   S D DV++
Sbjct: 513 SDIEQPDMMTSSCGMSRDADVQS 535


>ref|XP_011084690.1| PREDICTED: sister chromatid cohesion 1 protein 4-like isoform X1
           [Sesamum indicum] gi|747075322|ref|XP_011084691.1|
           PREDICTED: sister chromatid cohesion 1 protein 4-like
           isoform X1 [Sesamum indicum]
          Length = 1280

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 37/83 (44%), Positives = 52/83 (62%)
 Frame = -3

Query: 286 SNQQKSCRGEPELASEDQDGHILRDPETQTCQGIIYSSGLNLDAHEEGTSTETIVLRPYN 107
           +NQ+KSC    +LASE+QD  + ++PETQTC     SS LNLD  E+  S+ET+ +RP N
Sbjct: 457 TNQEKSCPDVSDLASENQDVSLRQEPETQTCHEPTDSSSLNLDVREKVVSSETMFVRPSN 516

Query: 106 SVQEHTDLAKPAFCPSNDGDVKA 38
           S  E  D+   +   S D DV++
Sbjct: 517 SDIEQPDMMTSSCGMSRDADVQS 539


Top