BLASTX nr result

ID: Perilla23_contig00018867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00018867
         (477 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009620887.1| PREDICTED: putative F-box protein At1g49610 ...    60   8e-07
ref|XP_009795820.1| PREDICTED: putative F-box protein At1g49610 ...    58   2e-06
ref|XP_012091495.1| PREDICTED: F-box protein At5g03100-like [Jat...    56   9e-06

>ref|XP_009620887.1| PREDICTED: putative F-box protein At1g49610 [Nicotiana
           tomentosiformis] gi|697133685|ref|XP_009620888.1|
           PREDICTED: putative F-box protein At1g49610 [Nicotiana
           tomentosiformis] gi|697133687|ref|XP_009620889.1|
           PREDICTED: putative F-box protein At1g49610 [Nicotiana
           tomentosiformis]
          Length = 452

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
 Frame = +1

Query: 79  DTLRPILPTIQHVEKVRLSDWCIKVIGDAKMKHLLSPFPNVKFLKLHAICVEYGQIFG-- 252
           D L  ++ +++HVE + L  WC++V+   + K + S     K + L +I ++   +FG  
Sbjct: 267 DNLMELVRSLKHVENLTLGAWCVEVLALREKKRIPSQVSTHKCVTL-SIHMKEDDLFGTV 325

Query: 253 -LLEIFPKLKMLVLQDERKVRPYTYPKSLKF-DAKSS--------LKFEANLPKSFLQQL 402
            LL+  P L+ML++  + +  PY  PK ++  D+K+         L  +    K  L  L
Sbjct: 326 NLLKGSPALQMLII--DMQYVPYEQPKGVELADSKNFYNSNGANYLASQVKHVKCLLHHL 383

Query: 403 RTVEITLAESDNSIFPFIEILLK 471
           +TV+IT   +  S+FPF+E +LK
Sbjct: 384 KTVKITQFVAKTSVFPFLEFILK 406


>ref|XP_009795820.1| PREDICTED: putative F-box protein At1g49610 isoform X1 [Nicotiana
           sylvestris] gi|698500083|ref|XP_009795821.1| PREDICTED:
           putative F-box protein At1g49610 isoform X1 [Nicotiana
           sylvestris] gi|698500085|ref|XP_009795822.1| PREDICTED:
           putative F-box protein At1g49610 isoform X1 [Nicotiana
           sylvestris] gi|698500087|ref|XP_009795823.1| PREDICTED:
           putative F-box protein At1g49610 isoform X1 [Nicotiana
           sylvestris] gi|698500089|ref|XP_009795824.1| PREDICTED:
           putative F-box protein At1g49610 isoform X1 [Nicotiana
           sylvestris]
          Length = 452

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
 Frame = +1

Query: 79  DTLRPILPTIQHVEKVRLSDWCIKVIGDAKMKHLLSPFPNVKFLKLHAICVEYGQIFG-- 252
           D L  ++ +++HVE + L  WC++++   + K + S     K + L +I ++   + G  
Sbjct: 267 DNLMELIRSLKHVENLTLGAWCVEILALREKKRIPSQISTRKCVTL-SIHMKEDDLLGTV 325

Query: 253 -LLEIFPKLKMLVLQDERKVRPYTYPKSLKFDAKSS---------LKFEANLPKSFLQQL 402
            LL+  P L+ML++  E    PY  PK  +     +         L  +A   K  L  L
Sbjct: 326 NLLKGSPALQMLIIDME--YGPYEQPKGAELADSENFYTSIGANYLASQAKQVKCLLHHL 383

Query: 403 RTVEITLAESDNSIFPFIEILLK 471
           +TV+IT   +  S+FPF+E +LK
Sbjct: 384 KTVKITQFVAKTSVFPFLEFILK 406


>ref|XP_012091495.1| PREDICTED: F-box protein At5g03100-like [Jatropha curcas]
           gi|643703823|gb|KDP20887.1| hypothetical protein
           JCGZ_21358 [Jatropha curcas]
          Length = 505

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
 Frame = +1

Query: 1   SLIDATLWFYGE--NRRDYFLPKDIDLWDTLRPILPTIQHVEKVRLSDWCIKVIGDAKMK 174
           SL+  TL FY E    R   L K +   + +R +L  + HV+++++ +WCI+V+   ++K
Sbjct: 291 SLVSVTLDFYLEVDKERGNKLYKYVKYQNLVRQLLEKVHHVKELKIGNWCIQVLSILEVK 350

Query: 175 HLLSPFPNVKFLKLHAICVEYGQIFG---LLEIFPKLKMLVLQDERKVRPYTYPKSLKFD 345
            L SP  N K L L     E   + G   LL   P+L+ L+++       + + +     
Sbjct: 351 GLPSPLSNRKCLTLSVYDFENWHLPGIASLLRSSPELEKLIMKHRATTLQFNFDRKFAKS 410

Query: 346 AKSSLKFEANLPKSFLQ-QLRTVEI----TLAESDNSIFPFIEILLKQA 477
                 + A+L    L   L+TVEI    T +     +  F+E +LK A
Sbjct: 411 YDFGDNYWASLKTICLSLHLKTVEIIDFRTRSGEYVLVIDFVEFILKNA 459


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