BLASTX nr result

ID: Perilla23_contig00017118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00017118
         (341 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094245.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    62   1e-07
ref|XP_012828754.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    57   4e-06

>ref|XP_011094245.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Sesamum
           indicum]
          Length = 320

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = -3

Query: 240 TAFDGVDLNQXXXXXXXXXXXXXXXXXXXXXELSIGAQGSVSEADEPSSFV----DAGKL 73
           +AFD V+LNQ                      L    Q +V+EA+E  + V    +AG+L
Sbjct: 69  SAFDSVELNQEEVEEE----------------LESSIQETVTEAEEEENGVSPSAEAGRL 112

Query: 72  YVGNLPFSMTSAQLSEIFAEAGRV 1
           YVGNLPFSMTS+QLSEIFAEAGRV
Sbjct: 113 YVGNLPFSMTSSQLSEIFAEAGRV 136


>ref|XP_012828754.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Erythranthe
           guttatus] gi|604298017|gb|EYU18105.1| hypothetical
           protein MIMGU_mgv1a009876mg [Erythranthe guttata]
          Length = 328

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
 Frame = -3

Query: 240 TAFDGVDLNQXXXXXXXXXXXXXXXXXXXXXELSIGAQGSVSEADEPSSFVD--AGKLYV 67
           TAFD V+LNQ                        I  + ++SE  +  + V   +G+LY 
Sbjct: 71  TAFDSVELNQEDVDDDDDEDEEE----------DIDEEETLSEIQDEGADVSQPSGRLYA 120

Query: 66  GNLPFSMTSAQLSEIFAEAGRV 1
           GNLPFSMTSAQLSEIFAEAGRV
Sbjct: 121 GNLPFSMTSAQLSEIFAEAGRV 142


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