BLASTX nr result

ID: Perilla23_contig00013523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00013523
         (521 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containi...   113   6e-23
ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containi...    89   1e-15
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi...    70   6e-10
ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containi...    67   7e-09
ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-08

>ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum] gi|747081065|ref|XP_011087805.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Sesamum indicum]
           gi|747081067|ref|XP_011087806.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum] gi|747081069|ref|XP_011087807.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Sesamum indicum]
           gi|747081071|ref|XP_011087808.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum] gi|747081073|ref|XP_011087809.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Sesamum indicum]
           gi|747081075|ref|XP_011087810.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum]
          Length = 552

 Score =  113 bits (282), Expect = 6e-23
 Identities = 50/88 (56%), Positives = 67/88 (76%)
 Frame = -3

Query: 264 RMEFWHQRAVIPKVLSTGFFHGQARTESPNSSASSTQWFVKVVSTLCIRHPHALAIFNSD 85
           RM+FW QR  I KV ST   HG AR ES +SS +S  WF+KVV TLC+ H H+L  F++D
Sbjct: 2   RMQFWAQRVSISKVFSTALLHGHARIESSHSSPASIVWFIKVVCTLCVHHSHSLNFFDTD 61

Query: 84  YFRNNLDPFVAYGVIYLLNSRLDDPNLA 1
           YFR +L+PFVA+GV+Y +N+RL++P+LA
Sbjct: 62  YFRESLNPFVAFGVVYHINNRLNNPDLA 89


>ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Erythranthe guttatus] gi|848930449|ref|XP_012828448.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Erythranthe guttatus]
           gi|604298483|gb|EYU18527.1| hypothetical protein
           MIMGU_mgv1a003955mg [Erythranthe guttata]
          Length = 552

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
 Frame = -3

Query: 261 MEFWHQRAVIPKVLSTGFFHGQA---RTESPNS--SASSTQWFVKVVSTLCIRHPHALAI 97
           M+FW  R  I KV     FHG++    + SP S  S SST WFVKVV TLCIR   +LA 
Sbjct: 1   MQFWAPRVPISKVFLASLFHGRSSLVESSSPPSPSSPSSTFWFVKVVCTLCIRRSPSLAF 60

Query: 96  FNSDYFRNNLDPFVAYGVIYLLNSRLDDPNLA 1
             +DYFR NL+P VA+ V+Y +NSRL++P+LA
Sbjct: 61  VETDYFRVNLNPSVAFAVVYHINSRLNNPDLA 92


>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Solanum tuberosum]
           gi|565370447|ref|XP_006351832.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Solanum tuberosum]
          Length = 550

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
 Frame = -3

Query: 261 MEFWHQRAVIPKVLSTGFFHGQARTESPNSSASSTQ--WFVKVVSTLCIRHPHALAIFNS 88
           M  W QRA    +L    FHG   ++S  S     +  WF KVV  LC  H  +L +F S
Sbjct: 1   MPLWVQRA--SNILLIARFHGLTSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGS 58

Query: 87  DYFRNNLDPFVAYGVIYLLNSRLDDPNLA 1
           DYFR NLDP +A+ VI+ +N+ L++P LA
Sbjct: 59  DYFRQNLDPHIAFTVIHHINTNLNNPRLA 87


>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Solanum lycopersicum] gi|723664227|ref|XP_010315007.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Solanum lycopersicum]
          Length = 550

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -3

Query: 261 MEFWHQRAVIPKVLSTGFFHGQARTESPNSSASSTQ--WFVKVVSTLCIRHPHALAIFNS 88
           M  W QRA    +++   FHG   ++S  S     +  WF KVV  LC  H  +L +F S
Sbjct: 1   MPLWVQRASNISLIAR--FHGLTSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGS 58

Query: 87  DYFRNNLDPFVAYGVIYLLNSRLDDPNLA 1
           DYFR NLDP +A+ VI+ +N+ L++P LA
Sbjct: 59  DYFRQNLDPHIAFTVIHHINTNLNNPRLA 87


>ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana sylvestris] gi|698470503|ref|XP_009783825.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Nicotiana sylvestris]
           gi|698470507|ref|XP_009783826.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana sylvestris] gi|698470511|ref|XP_009783827.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Nicotiana sylvestris]
          Length = 546

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 35/87 (40%), Positives = 48/87 (55%)
 Frame = -3

Query: 261 MEFWHQRAVIPKVLSTGFFHGQARTESPNSSASSTQWFVKVVSTLCIRHPHALAIFNSDY 82
           M  W QR  +  +     FH    ++S  S      WF KVV  LC  H  +L +F SDY
Sbjct: 1   MPLWVQR--VSNISLIARFH---TSKSLPSYGPEAIWFTKVVCLLCFHHSQSLDVFTSDY 55

Query: 81  FRNNLDPFVAYGVIYLLNSRLDDPNLA 1
           FR NLDP +A+ VI+ +N+ L++P LA
Sbjct: 56  FRQNLDPHIAFNVIHHINTNLNNPRLA 82


>ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
           gi|697123061|ref|XP_009615518.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
           gi|697123063|ref|XP_009615519.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
           gi|697123065|ref|XP_009615520.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
           gi|697123067|ref|XP_009615521.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
          Length = 546

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 35/87 (40%), Positives = 49/87 (56%)
 Frame = -3

Query: 261 MEFWHQRAVIPKVLSTGFFHGQARTESPNSSASSTQWFVKVVSTLCIRHPHALAIFNSDY 82
           M  W QRA    +++   FH    ++S  S      WF KVV  LC  H  +L +F SD+
Sbjct: 1   MPLWVQRASNISLIAR--FH---TSKSLPSYGPEAIWFTKVVCLLCFHHSQSLDVFTSDF 55

Query: 81  FRNNLDPFVAYGVIYLLNSRLDDPNLA 1
           FR NLDP +A+ VI+ +N+ L +P LA
Sbjct: 56  FRQNLDPHIAFNVIHHINTNLRNPRLA 82


Top