BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00012235
         (727 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]   361   2e-97
ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [S...   316   1e-83
ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [E...   269   1e-69
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise...   245   2e-62
emb|CDP19325.1| unnamed protein product [Coffea canephora]            245   2e-62
ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   225   3e-56
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   223   1e-55
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...   217   7e-54
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   216   1e-53
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   215   3e-53
ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [G...   209   1e-51
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun...   208   3e-51
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [S...   208   3e-51
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]              207   4e-51
gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gos...   206   2e-50
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]              206   2e-50
gb|KNA17291.1| hypothetical protein SOVF_081360 [Spinacia oleracea]   199   1e-48
ref|XP_010678731.1| PREDICTED: RNA-dependent RNA polymerase 2 [B...   197   4e-48
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th...   197   8e-48
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis...   197   8e-48

>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
          Length = 972

 Score =  361 bits (927), Expect = 2e-97
 Identities = 178/212 (83%), Positives = 194/212 (91%), Gaps = 1/212 (0%)
 Frame = -2

Query: 633 MIIPTPTERR-TLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHG 457
           MIIP  TE R TLTV+VTNIPPIAIAKDLQ FLESV+G+GTVFAVEIFTERENWKSRGHG
Sbjct: 1   MIIPLLTEARPTLTVKVTNIPPIAIAKDLQAFLESVLGKGTVFAVEIFTERENWKSRGHG 60

Query: 456 RVQFESPEAKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAG 277
           RVQFESPEAKIEALSLSHH+K +FKGFYLS+THSLEEIIIRPV+PIYRVG   GLVLFAG
Sbjct: 61  RVQFESPEAKIEALSLSHHRKFLFKGFYLSVTHSLEEIIIRPVDPIYRVGDGGGLVLFAG 120

Query: 276 IMVKADCMGILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDG 97
           IM++ADCMG LESW+G+KLW MP+RKKI FFVDH GESYKLEVQ+GDVLES GCCL G  
Sbjct: 121 IMIRADCMGTLESWNGMKLWFMPERKKIHFFVDHGGESYKLEVQFGDVLESRGCCLGGGD 180

Query: 96  KKVDAILLKLKHAPKVFKKVSGPKIASRFTSD 1
            KVDAILLKL+HAPK+FKKVSGPKIASRFT+D
Sbjct: 181 MKVDAILLKLRHAPKIFKKVSGPKIASRFTTD 212


>ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [Sesamum indicum]
          Length = 1133

 Score =  316 bits (809), Expect = 1e-83
 Identities = 148/203 (72%), Positives = 182/203 (89%)
 Frame = -2

Query: 609 RRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPEA 430
           R TLTV+V+NIP  AIA++L +FLES +G+GTVFA+EIFTE +NWKSRGHGRVQF+SPEA
Sbjct: 10  RPTLTVKVSNIPQTAIAQELLSFLESTLGKGTVFAIEIFTEHKNWKSRGHGRVQFDSPEA 69

Query: 429 KIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCMG 250
           KI+ALSLS  +KL+FKGFY+SI+ S E++IIRPVEP  RVG   G+VL AG+MV+ADCMG
Sbjct: 70  KIKALSLSEQRKLLFKGFYISISPSFEDVIIRPVEPRNRVGYGGGMVLLAGVMVRADCMG 129

Query: 249 ILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAILLK 70
           ILESWDGV+LW MP+RKK++FFV+HEGE YKLEVQ+GDVLE+ GC L+GDGKKVDAILLK
Sbjct: 130 ILESWDGVRLWFMPERKKLEFFVNHEGECYKLEVQFGDVLETRGCYLDGDGKKVDAILLK 189

Query: 69  LKHAPKVFKKVSGPKIASRFTSD 1
           LKHAPKV++K+SGPK+AS+F +D
Sbjct: 190 LKHAPKVYRKISGPKVASKFATD 212


>ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [Erythranthe guttatus]
           gi|604343689|gb|EYU42543.1| hypothetical protein
           MIMGU_mgv1a000463mg [Erythranthe guttata]
          Length = 1135

 Score =  269 bits (688), Expect = 1e-69
 Identities = 135/202 (66%), Positives = 161/202 (79%)
 Frame = -2

Query: 615 TERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESP 436
           T R TLTV+V NIP   IA +LQTFLES +G+GT+FAVEIFTER NWKSRGHGRVQFE  
Sbjct: 3   TGRPTLTVKVQNIPQTIIAHELQTFLESAVGKGTIFAVEIFTERTNWKSRGHGRVQFEEQ 62

Query: 435 EAKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADC 256
           EAKI+ALSLS    LIFKGF LSI  S E++IIRPV+P  RVG   G    AG+MV+ +C
Sbjct: 63  EAKIKALSLSEQGNLIFKGFRLSILPSSEDVIIRPVDPTNRVGNCAGSGFVAGVMVRDNC 122

Query: 255 MGILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAIL 76
           M +LE+W G  LW MP+RK++DF V ++GESYKLEVQ+GDV ES  CCL+  G+KVDAIL
Sbjct: 123 MAVLENWVG-DLWFMPERKRLDFVVIYDGESYKLEVQFGDVAESGRCCLDRGGEKVDAIL 181

Query: 75  LKLKHAPKVFKKVSGPKIASRF 10
           LKLKHAPKV+KK+SGPK++SRF
Sbjct: 182 LKLKHAPKVYKKISGPKVSSRF 203


>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
          Length = 1094

 Score =  245 bits (626), Expect = 2e-62
 Identities = 113/175 (64%), Positives = 142/175 (81%)
 Frame = -2

Query: 525 GEGTVFAVEIFTERENWKSRGHGRVQFESPEAKIEALSLSHHKKLIFKGFYLSITHSLEE 346
           G G+VFA++IFTE  NWKSRGHGRVQF+SP+ K EALSLS  +KL+FKG YL ++HS E+
Sbjct: 3   GNGSVFAIDIFTEHVNWKSRGHGRVQFDSPKFKAEALSLSEERKLVFKGHYLCVSHSFED 62

Query: 345 IIIRPVEPIYRVGKDDGLVLFAGIMVKADCMGILESWDGVKLWVMPDRKKIDFFVDHEGE 166
           II RPV+P  R+    GL L AGIM+K DCMGILESW+G KLWV+P+RKK+  F+D+E E
Sbjct: 63  IITRPVDPENRLENAAGLCLLAGIMLKGDCMGILESWNGCKLWVLPERKKLLLFLDNEEE 122

Query: 165 SYKLEVQYGDVLESVGCCLEGDGKKVDAILLKLKHAPKVFKKVSGPKIASRFTSD 1
           SYKLE+QYGD+ E+  CC  GDG +++AILLKLKHAPKVF+K+SGP + S+F SD
Sbjct: 123 SYKLEIQYGDICETHLCCSNGDGDEINAILLKLKHAPKVFRKISGPDVTSKFASD 177


>emb|CDP19325.1| unnamed protein product [Coffea canephora]
          Length = 1120

 Score =  245 bits (625), Expect = 2e-62
 Identities = 118/204 (57%), Positives = 156/204 (76%)
 Frame = -2

Query: 612 ERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPE 433
           ER T TVRV NIP  A AKDL  F +S IGE TVFA+EIF+E +NWKSRGHG+VQFE+ E
Sbjct: 5   ERTTATVRVQNIPQSANAKDLLAFFQSTIGEDTVFAIEIFSEHKNWKSRGHGKVQFETLE 64

Query: 432 AKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCM 253
           AKI+ LSLS   KL FKG +L ++HS++E+I RPV+   R+      VL  GI+++ DCM
Sbjct: 65  AKIKCLSLSEKGKLFFKGSHLRLSHSIDEVIFRPVDSKLRIKNG---VLRTGILLRNDCM 121

Query: 252 GILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAILL 73
            +LE WDGVK+W+MP+R  ++F++ H GE YKLEVQ+GDVLES GCCL  D +  +A+LL
Sbjct: 122 SVLERWDGVKVWIMPERNILEFWLSHGGECYKLEVQFGDVLESCGCCL--DDQNPNAVLL 179

Query: 72  KLKHAPKVFKKVSGPKIASRFTSD 1
           KLKHAPK+++K SGP +A++F++D
Sbjct: 180 KLKHAPKIYQKFSGPNVAAKFSAD 203


>ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana
           tomentosiformis]
          Length = 1120

 Score =  225 bits (573), Expect = 3e-56
 Identities = 111/205 (54%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
 Frame = -2

Query: 612 ERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPE 433
           +R T TVRV+NIP  AIAK L  F ES IG+G+VFA +IF+E +NWKSRGHGRVQFE+ +
Sbjct: 5   KRITATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQFETAQ 64

Query: 432 AKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCM 253
           +K+++LSLS   KL+FKG  L +T S ++II RP+EP YR  K    +L  G+++K D M
Sbjct: 65  SKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIEPNYRFQKG---ILHTGVLLKNDYM 121

Query: 252 GILESWDGVKLWVMPDRKKIDFFVDH-EGESYKLEVQYGDVLESVGCCLEGDGKKVDAIL 76
            +LE+W+ VK  +MP+RK ++F+V H +GE Y+LEVQ+GD++E+ GC LE +     A+L
Sbjct: 122 EVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCGCSLEDE---KPALL 178

Query: 75  LKLKHAPKVFKKVSGPKIASRFTSD 1
           LKLKHAPK++++VSGP +AS+F+SD
Sbjct: 179 LKLKHAPKLYQRVSGPGVASKFSSD 203


>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
          Length = 1120

 Score =  223 bits (567), Expect = 1e-55
 Identities = 111/205 (54%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
 Frame = -2

Query: 612 ERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPE 433
           +R T TVRV+NIP  AIAK L  F ES I +G+VFA +IF+E +NWKSRGHGRVQFE+ +
Sbjct: 5   KRVTATVRVSNIPQTAIAKQLFDFFESSIRKGSVFACDIFSEHKNWKSRGHGRVQFETSQ 64

Query: 432 AKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCM 253
           +K++ALSLS   KLIFKG  L +T S ++II+RP+EP YR  K    +L  G+++K D M
Sbjct: 65  SKLQALSLSEQGKLIFKGHQLILTSSFDDIIVRPIEPNYRFQKG---ILHTGVLLKNDYM 121

Query: 252 GILESWDGVKLWVMPDRKKIDFFVDH-EGESYKLEVQYGDVLESVGCCLEGDGKKVDAIL 76
            +LE+W+ VK  +MP+RK ++F+V + +GE Y+LEVQ+GD++E+ GC LE +     A+L
Sbjct: 122 EVLETWENVKTLIMPERKSLEFWVSYAKGECYRLEVQFGDIIETCGCSLEDE---KPALL 178

Query: 75  LKLKHAPKVFKKVSGPKIASRFTSD 1
           LKLKHAPK++++VSGP +AS+F+SD
Sbjct: 179 LKLKHAPKLYQRVSGPGVASKFSSD 203


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score =  217 bits (552), Expect = 7e-54
 Identities = 109/205 (53%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
 Frame = -2

Query: 612 ERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPE 433
           +R T TVRV+NIP  AIAK L  F ES IG+G+VFA +IF+E +NWKSRGHGRVQFE+ +
Sbjct: 5   KRVTATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQFETSQ 64

Query: 432 AKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCM 253
           +K+++LSLS   KL+FKG  L +T S ++II RP+E  YR  K    +L  GI+++ D M
Sbjct: 65  SKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKG---ILHTGILLENDYM 121

Query: 252 GILESWDGVKLWVMPDRKKIDFFVDH-EGESYKLEVQYGDVLESVGCCLEGDGKKVDAIL 76
            +LE+W+ VK  +MP+RK ++F+V H +GE Y+LEVQ+GD++E+  C LE +     A+L
Sbjct: 122 EVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLEDE---KTALL 178

Query: 75  LKLKHAPKVFKKVSGPKIASRFTSD 1
           LKLKHAPK++++VSGP +AS+F+SD
Sbjct: 179 LKLKHAPKLYQRVSGPGVASKFSSD 203


>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score =  216 bits (550), Expect = 1e-53
 Identities = 110/204 (53%), Positives = 151/204 (74%)
 Frame = -2

Query: 612 ERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPE 433
           +R T TVRV+NIP  AIAKDL  F +S+IG+G+VFA +IF+E +NWKSRGHGRVQFE+ +
Sbjct: 5   KRATATVRVSNIPQSAIAKDLFDFFDSLIGKGSVFACDIFSEHKNWKSRGHGRVQFETLQ 64

Query: 432 AKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCM 253
            K+  LSLS    L+FKG  LS+  S ++II RPVEP  R    DG +L  G++VK D M
Sbjct: 65  DKLHCLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRF--QDG-ILHTGLLVKNDVM 121

Query: 252 GILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAILL 73
            +LE+W+ VK  +MP+RK ++F+V H  E Y+LEVQ+GDV+E+  C LE    +  A+LL
Sbjct: 122 QVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVVEATVCSLE---NQKSALLL 178

Query: 72  KLKHAPKVFKKVSGPKIASRFTSD 1
           KLKHAPK++++VSGP +AS+F++D
Sbjct: 179 KLKHAPKLYQRVSGPAVASKFSAD 202


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
           gi|297733815|emb|CBI15062.3| unnamed protein product
           [Vitis vinifera]
          Length = 1127

 Score =  215 bits (547), Expect = 3e-53
 Identities = 111/199 (55%), Positives = 150/199 (75%)
 Frame = -2

Query: 597 TVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPEAKIEA 418
           TV+V+NIP  AIAK+L +FLES +G  T++A+EI TE +NWKSRG GRVQFE+ +AK  A
Sbjct: 8   TVKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQFETLQAKRAA 67

Query: 417 LSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCMGILES 238
             LS    L+F+G  LSI+ + ++II+RPVEP  +V   D  VL  G +V+ DCM +LES
Sbjct: 68  DLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQV---DSGVLHVGFLVEDDCMLVLES 124

Query: 237 WDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAILLKLKHA 58
           W+GVK  VMP+R +++F+VD +GE YKLEV + DVLES  CCL   G KV+A+LLKLK+A
Sbjct: 125 WEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCL--GGGKVNALLLKLKYA 182

Query: 57  PKVFKKVSGPKIASRFTSD 1
           PK+F+K +GP IAS+F++D
Sbjct: 183 PKIFQKFAGPNIASKFSAD 201


>ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [Gossypium raimondii]
           gi|763786137|gb|KJB53208.1| hypothetical protein
           B456_008G296900 [Gossypium raimondii]
          Length = 1147

 Score =  209 bits (533), Expect = 1e-51
 Identities = 99/205 (48%), Positives = 148/205 (72%)
 Frame = -2

Query: 615 TERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESP 436
           TE    T+R+TNIP  A+AKDL  F ES +G  +VFA+EI T+R NWKSRG GRVQF +P
Sbjct: 4   TEIERPTLRLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAP 63

Query: 435 EAKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADC 256
           +AK +AL LS H  L+FK   L ++ + ++II RP+   +R+   DG VL AG M   DC
Sbjct: 64  QAKSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRL---DGGVLHAGFMSSDDC 120

Query: 255 MGILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAIL 76
           + +LE W+GV+ W+MP+R++++F+V  +GE YKL+  + D+ E+VGCC   DG   +A+L
Sbjct: 121 LRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCF--DGSACNALL 178

Query: 75  LKLKHAPKVFKKVSGPKIASRFTSD 1
           L++++AP++++KVSGP +AS+F++D
Sbjct: 179 LRVRYAPRIYQKVSGPNVASKFSTD 203


>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
           gi|462407047|gb|EMJ12511.1| hypothetical protein
           PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score =  208 bits (529), Expect = 3e-51
 Identities = 104/199 (52%), Positives = 147/199 (73%)
 Frame = -2

Query: 597 TVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPEAKIEA 418
           TVRV+NIP    AK+L +FL+S +G  +VFAVEI ++ +NWKSRG GRVQF + EAK EA
Sbjct: 8   TVRVSNIPQTVTAKELLSFLQSKLGTDSVFAVEIISDHKNWKSRGFGRVQFTTLEAKSEA 67

Query: 417 LSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCMGILES 238
            SLS    L+FK   L ++ + ++II RPV+P  R+   +G VL AG MVK DCM +LES
Sbjct: 68  YSLSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRL---NGTVLHAGFMVKGDCMSMLES 124

Query: 237 WDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAILLKLKHA 58
           W+GV+ WVMP+RK+++F+V    E YKLE+ + +++ES GC L   G+KV+A+LLKLK  
Sbjct: 125 WEGVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGCRL--GGEKVNALLLKLKFG 182

Query: 57  PKVFKKVSGPKIASRFTSD 1
           P++F+K+SGP +A+RF++D
Sbjct: 183 PRIFRKISGPNVAARFSTD 201


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
          Length = 1119

 Score =  208 bits (529), Expect = 3e-51
 Identities = 104/204 (50%), Positives = 146/204 (71%)
 Frame = -2

Query: 612 ERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPE 433
           +R T TVRV+NIP  AIAKDL  F +S+IG+G+VFA +I +E +NWKSRGHGRVQFE+ +
Sbjct: 5   KRATATVRVSNIPQSAIAKDLSNFFDSLIGKGSVFACDIHSEHKNWKSRGHGRVQFETLQ 64

Query: 432 AKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCM 253
            K+  LSL+    L+FKG  LS+  S ++II RPVEP  R       +L  G++V+ D M
Sbjct: 65  DKLHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRF---QAGILHTGLLVEKDVM 121

Query: 252 GILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAILL 73
            +LE+W+ VK  +MP+RK ++F+V H  E Y+LEVQ+GDV E   C +E    +  A+LL
Sbjct: 122 QVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLCSVE---NQKSALLL 178

Query: 72  KLKHAPKVFKKVSGPKIASRFTSD 1
           KLKHAPK++++VSGP +AS+F++D
Sbjct: 179 KLKHAPKLYQRVSGPAVASKFSAD 202


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  207 bits (528), Expect = 4e-51
 Identities = 98/205 (47%), Positives = 148/205 (72%)
 Frame = -2

Query: 615 TERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESP 436
           TE    T+R+T+IP  A+AKDL  F ES +G  +VFA+EI T+R NWKSRG GRVQF +P
Sbjct: 4   TEIERPTLRLTHIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAP 63

Query: 435 EAKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADC 256
           +AK +AL LS H  L+FK   L ++ + ++II RP+   +R+   DG VL AG M   DC
Sbjct: 64  QAKSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRL---DGGVLHAGFMSSDDC 120

Query: 255 MGILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAIL 76
           + +LE W+GV+ W+MP+R++++F+V  +GE YKL+  + D+ E+VGCC   DG   +A+L
Sbjct: 121 LRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCF--DGSACNALL 178

Query: 75  LKLKHAPKVFKKVSGPKIASRFTSD 1
           L++++AP++++KVSGP +AS+F++D
Sbjct: 179 LRVRYAPRIYQKVSGPNVASKFSTD 203


>gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gossypium arboreum]
          Length = 1147

 Score =  206 bits (523), Expect = 2e-50
 Identities = 96/199 (48%), Positives = 145/199 (72%)
 Frame = -2

Query: 597 TVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPEAKIEA 418
           T+R+TNIP  A+AKDL  F ES +G  +VFA+EI T+R NWKSRG GRVQF +P+A  +A
Sbjct: 10  TLRLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQAMSDA 69

Query: 417 LSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCMGILES 238
           L LS H  L+FK   L ++ + ++II RP+   +R+   DG VL AG M   DC+ +LE 
Sbjct: 70  LRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRL---DGGVLHAGFMSSDDCLRVLER 126

Query: 237 WDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAILLKLKHA 58
           W+GV+ W+MP+R++++F+V  +GE YKL+  + D+ E+VGCC   DG   +A+LL++++A
Sbjct: 127 WEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCF--DGSACNALLLRVRYA 184

Query: 57  PKVFKKVSGPKIASRFTSD 1
           P++++KVSGP +AS+F++D
Sbjct: 185 PRIYRKVSGPNVASKFSTD 203


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  206 bits (523), Expect = 2e-50
 Identities = 98/205 (47%), Positives = 146/205 (71%)
 Frame = -2

Query: 615 TERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESP 436
           TE    T+R+TNIP  A+AKDL  F ES +G  +VFA+EI T+R NWKSRG GRVQF +P
Sbjct: 4   TEIERPTLRLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAP 63

Query: 435 EAKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADC 256
           +A  +AL LS H  L+FK   L ++ + ++II RP+   +R+   DG VL AG M   DC
Sbjct: 64  QAMSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRL---DGGVLHAGFMSSDDC 120

Query: 255 MGILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAIL 76
           + +LE W+GV+ W+MP+R++++F+V  +GE YKL+  + D+ E+VGCC   DG   +A+L
Sbjct: 121 LRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCF--DGSACNALL 178

Query: 75  LKLKHAPKVFKKVSGPKIASRFTSD 1
           L++++AP+ ++KVSGP +AS+F++D
Sbjct: 179 LRVRYAPRTYRKVSGPNVASKFSTD 203


>gb|KNA17291.1| hypothetical protein SOVF_081360 [Spinacia oleracea]
          Length = 1116

 Score =  199 bits (507), Expect = 1e-48
 Identities = 99/211 (46%), Positives = 152/211 (72%)
 Frame = -2

Query: 633 MIIPTPTERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGR 454
           M I  PT  R+ TVRV+NIP  A A+D+  FLES IG+GT+FA+EIFTE++NWKS+GHGR
Sbjct: 1   MAIDRPTVERS-TVRVSNIPTTATAQDIFDFLESKIGKGTIFAIEIFTEKKNWKSKGHGR 59

Query: 453 VQFESPEAKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGI 274
           VQFES ++K +A  L+    L+FKG  LS++ S E++++RP+EP  R  + D   ++ G+
Sbjct: 60  VQFESLDSKSKAQELALENDLLFKGCPLSLSSSHEDVVVRPIEPSCRGVRGD---VYVGL 116

Query: 273 MVKADCMGILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGK 94
           M + D M ++++ +  K+WVMPDR  + F ++ EG+ YK+EV + D+ E+ GC  +   +
Sbjct: 117 MKEEDQMCVIDTLEDAKIWVMPDRNCVVFHLELEGKFYKMEVHFDDIFEAFGCYFD---E 173

Query: 93  KVDAILLKLKHAPKVFKKVSGPKIASRFTSD 1
           +  AILLKLK+APK+++++SGP + +RFT+D
Sbjct: 174 QSPAILLKLKYAPKIYQRISGPNLYTRFTAD 204


>ref|XP_010678731.1| PREDICTED: RNA-dependent RNA polymerase 2 [Beta vulgaris subsp.
           vulgaris] gi|870859078|gb|KMT10542.1| hypothetical
           protein BVRB_5g116660 [Beta vulgaris subsp. vulgaris]
          Length = 1116

 Score =  197 bits (502), Expect = 4e-48
 Identities = 98/211 (46%), Positives = 149/211 (70%)
 Frame = -2

Query: 633 MIIPTPTERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGR 454
           M I  PT  RT T++++NIP  A A+DL  FLES IG+ T+FA+EIFT+++NWKS+GHGR
Sbjct: 1   MAIDRPTVERT-TLKISNIPLTATAQDLFDFLESTIGKATIFALEIFTDKKNWKSKGHGR 59

Query: 453 VQFESPEAKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGI 274
           VQFE+ +AK +A  LS    L F+GF LS++ S E++++RP++P +R    D   L+ G+
Sbjct: 60  VQFETLDAKSKATQLSLQNNLNFRGFPLSLSSSHEDVVVRPIDPNHRTKIGD---LYVGL 116

Query: 273 MVKADCMGILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGK 94
           M   D M ++E+++ V  WVMPDR  ++F V+ + + YKLEVQ+ D+ E+ GC  +    
Sbjct: 117 MSNEDNMCVIETFENVTFWVMPDRGCVEFHVEFDEKLYKLEVQFDDIFEAFGCYFD---P 173

Query: 93  KVDAILLKLKHAPKVFKKVSGPKIASRFTSD 1
           +  AIL KLK+APK+++K+SGP + +RF++D
Sbjct: 174 QSPAILFKLKYAPKIYQKISGPNLRTRFSAD 204


>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
           gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
           polymerase 2 isoform 1 [Theobroma cacao]
           gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
           2 isoform 1 [Theobroma cacao]
           gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
           2 isoform 1 [Theobroma cacao]
          Length = 1149

 Score =  197 bits (500), Expect = 8e-48
 Identities = 100/204 (49%), Positives = 143/204 (70%)
 Frame = -2

Query: 612 ERRTLTVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPE 433
           ER   T+RVTN+P  AIAKDL  FLE  +G  TVFA+EI T+R NWKSRG GRVQF + E
Sbjct: 10  ERERPTLRVTNVPQTAIAKDLLEFLEYKLGTDTVFAIEISTDRNNWKSRGFGRVQFATLE 69

Query: 432 AKIEALSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCM 253
           AK +A  LS    L+FK   L ++ + ++II RP+   +R+   DG VL  G MV+ D +
Sbjct: 70  AKSKAHLLSLRNDLVFKSHSLKLSETYDDIIPRPIRADHRL---DGGVLHVGFMVQDDYL 126

Query: 252 GILESWDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAILL 73
            +LE W+ V+ W+MP+R++++F++ + GE YKLEV + DVLE+VGCC   +G   +A+LL
Sbjct: 127 RVLERWEDVRGWLMPERRRLEFWLWNNGECYKLEVLFDDVLETVGCCF--NGSSCNALLL 184

Query: 72  KLKHAPKVFKKVSGPKIASRFTSD 1
           ++K+AP++++KVSGP IAS+   D
Sbjct: 185 RVKYAPRIYQKVSGPNIASKLRPD 208


>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
           gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
           2 [Cucumis sativus] gi|700208501|gb|KGN63597.1|
           hypothetical protein Csa_1G005580 [Cucumis sativus]
          Length = 1117

 Score =  197 bits (500), Expect = 8e-48
 Identities = 98/198 (49%), Positives = 144/198 (72%)
 Frame = -2

Query: 597 TVRVTNIPPIAIAKDLQTFLESVIGEGTVFAVEIFTERENWKSRGHGRVQFESPEAKIEA 418
           T+RV+N+P  AIA+DL  FL S +G  +VFA+EIFTER+NWKSRG GRVQF + EAK +A
Sbjct: 8   TLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKA 67

Query: 417 LSLSHHKKLIFKGFYLSITHSLEEIIIRPVEPIYRVGKDDGLVLFAGIMVKADCMGILES 238
           +SLS    L+F    L  +   ++I++RPV   +   + +  VL  G M+K + M +LES
Sbjct: 68  MSLSVQNSLVFGTQNLRFSLINDDIVVRPV---HATNRTENGVLHVGFMLKEERMSVLES 124

Query: 237 WDGVKLWVMPDRKKIDFFVDHEGESYKLEVQYGDVLESVGCCLEGDGKKVDAILLKLKHA 58
           W+GVK W+MP+R++I+F++ HE E YKLEV + ++LE+ G CL    +K++A+LLKLK+A
Sbjct: 125 WEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCL--GEEKLNALLLKLKYA 182

Query: 57  PKVFKKVSGPKIASRFTS 4
           P+++KK+SG  +ASRF+S
Sbjct: 183 PRIYKKISGSNMASRFSS 200