BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00009906
         (1129 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, ...   501   e-139
ref|XP_012831070.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   488   e-135
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   473   e-130
ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...   467   e-129
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   465   e-128
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, ...   465   e-128
gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -li...   465   e-128
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...   464   e-128
ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, ...   462   e-127
ref|XP_012065701.1| PREDICTED: DNA-directed RNA polymerases II, ...   461   e-127
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, ...   460   e-127
ref|XP_009785778.1| PREDICTED: DNA-directed RNA polymerases II, ...   459   e-126
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   458   e-126
ref|XP_009605052.1| PREDICTED: DNA-directed RNA polymerases II, ...   456   e-125
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, ...   455   e-125
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, ...   454   e-125
ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, ...   453   e-124
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   453   e-124
ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, ...   451   e-124
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype...   450   e-123

>ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Sesamum indicum]
          Length = 319

 Score =  501 bits (1289), Expect = e-139
 Identities = 252/280 (90%), Positives = 263/280 (93%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPV            + RGIIIVKLRR
Sbjct: 100  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVDFSDSSTGFDNTENRGIIIVKLRR 159

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMME LTL+EK++FV+SSPTK
Sbjct: 160  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMEGLTLEEKKEFVDSSPTK 219

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF INP+T QVYVHDAEAYTYDDEV+KKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS
Sbjct: 220  VFDINPNTHQVYVHDAEAYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 279

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QLFLNAI++LKQKLDAVRLSSDTVEADEQFGELGAHMRGG
Sbjct: 280  QLFLNAIDVLKQKLDAVRLSSDTVEADEQFGELGAHMRGG 319


>ref|XP_012831070.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV
            and V subunit 3-like [Erythranthe guttatus]
          Length = 279

 Score =  488 bits (1255), Expect = e-135
 Identities = 243/279 (87%), Positives = 261/279 (93%)
 Frame = -1

Query: 1126 MIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQCE 947
            MIAEVPTIAIDLVEIEVNSSVL DEFIAHR+GL+PL SERAMAMRFSRDCDACDGDGQCE
Sbjct: 1    MIAEVPTIAIDLVEIEVNSSVLGDEFIAHRVGLIPLTSERAMAMRFSRDCDACDGDGQCE 60

Query: 946  YCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRRG 767
            YCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPV            +++GIIIVKLRRG
Sbjct: 61   YCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVDFSDSSTGIDNGESKGIIIVKLRRG 120

Query: 766  QELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTKV 587
            QEL+LRAIARKGIGKDHAKWSPAATVTFMYEP+IYINEE+ME+LTL+EK++FVESSPTKV
Sbjct: 121  QELILRAIARKGIGKDHAKWSPAATVTFMYEPDIYINEELMESLTLEEKREFVESSPTKV 180

Query: 586  FGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKASQ 407
            F I+P+T QV +HDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTG +KASQ
Sbjct: 181  FDIHPTTQQVIIHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGAVKASQ 240

Query: 406  LFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            LFLNAI+ILKQKLDAVRLS+DTVEADEQFGELGAHMRGG
Sbjct: 241  LFLNAIDILKQKLDAVRLSADTVEADEQFGELGAHMRGG 279


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
            gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
            RNA polymerases II, IV and V subunit 3-like [Citrus
            sinensis] gi|557524889|gb|ESR36195.1| hypothetical
            protein CICLE_v10028849mg [Citrus clementina]
            gi|641840877|gb|KDO59794.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
            gi|641840878|gb|KDO59795.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
          Length = 319

 Score =  473 bits (1216), Expect = e-130
 Identities = 239/280 (85%), Positives = 257/280 (91%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLRAKC +DQTLDVTSKDLYSSDH+VVPV              RGIIIVKLRR
Sbjct: 100  EFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRR 159

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE++ME+L+L+EKQ +VESSPTK
Sbjct: 160  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTK 219

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P+TGQVYV DAEAYTYDDEVIKKAEAMGKPGLVEI+AKEDSFIFTVE+TG IKAS
Sbjct: 220  VFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKAS 279

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIE+LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 280  QLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 319


>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
            gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
            family protein [Theobroma cacao]
          Length = 318

 Score =  467 bits (1202), Expect = e-129
 Identities = 239/280 (85%), Positives = 254/280 (90%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLRAKC+ DQTLDVTSKDLYSSDHTVVPV              RGIIIVKLRR
Sbjct: 100  EFCSVEFHLRAKCMTDQTLDVTSKDLYSSDHTVVPVDFTDSAGYDSSEQ-RGIIIVKLRR 158

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE+MMETLTL+EKQ FVESSPT+
Sbjct: 159  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTR 218

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P+T QV V D EAYTYDDEV+KKAEAMGKPGLVEI+AKEDSFIFTVE+TG IKAS
Sbjct: 219  VFDIDPNTQQVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKAS 278

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIE+LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 279  QLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Solanum tuberosum]
          Length = 319

 Score =  465 bits (1197), Expect = e-128
 Identities = 234/280 (83%), Positives = 251/280 (89%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            +MIAEVPTIAIDLVEIEVNSSVLNDEFI+HRLGLVPL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   IMIAEVPTIAIDLVEIEVNSSVLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            EYCSVEF+LR KC++DQTLDVTSKDL SSDHTVVPV              +GIIIVKLRR
Sbjct: 100  EYCSVEFYLRVKCLSDQTLDVTSKDLLSSDHTVVPVDYSDTSSSFDNTPNKGIIIVKLRR 159

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEIYINE+MME+LTL+EK + VESSPTK
Sbjct: 160  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTK 219

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VFGI+P   QV V D EAYTYDDEV+KKAEAMGKPG+VEIHAKEDSFIFTVETTG +KAS
Sbjct: 220  VFGIDPENKQVIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKAS 279

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIE+LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 280  QLVLNAIEVLKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319


>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Solanum lycopersicum]
          Length = 319

 Score =  465 bits (1197), Expect = e-128
 Identities = 234/280 (83%), Positives = 251/280 (89%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            +MIAEVPTIAIDLVEIEVNSSVLNDEFI+HRLGLVPL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   IMIAEVPTIAIDLVEIEVNSSVLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            EYCSVEF+LR KC++DQTLDVTSKDL SSDHTVVPV              +GIIIVKLRR
Sbjct: 100  EYCSVEFYLRVKCLSDQTLDVTSKDLLSSDHTVVPVDYSDASSSFDNTPNKGIIIVKLRR 159

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEIYINE+MME+LTL+EK + VESSPTK
Sbjct: 160  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTK 219

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VFGI+P   QV V D EAYTYDDEV+KKAEAMGKPG+VEIHAKEDSFIFTVETTG +KAS
Sbjct: 220  VFGIDPENKQVIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKAS 279

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIE+LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 280  QLVLNAIEVLKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319


>gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
            [Gossypium arboreum]
          Length = 318

 Score =  465 bits (1196), Expect = e-128
 Identities = 236/280 (84%), Positives = 255/280 (91%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGL+PL S+RAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLRAKCI+DQTLDVTSKDLYSSDHTVVPV              RGIIIVKLRR
Sbjct: 100  EFCSVEFHLRAKCISDQTLDVTSKDLYSSDHTVVPVDFTDYAGYESSEQ-RGIIIVKLRR 158

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE+MM+TLTL+EKQ FV+SSPT+
Sbjct: 159  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTR 218

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P+T QV V D EAYTYDDEV+KKAEAMGKPGLVEI+AKEDSFIFT+E+TG +KAS
Sbjct: 219  VFDIDPNTQQVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKAS 278

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIEILKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 279  QLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Gossypium raimondii] gi|728821384|gb|KHG04309.1|
            DNA-directed RNA polymerase II subunit RPB3-A -like
            protein [Gossypium arboreum] gi|763780305|gb|KJB47376.1|
            hypothetical protein B456_008G023500 [Gossypium
            raimondii]
          Length = 318

 Score =  464 bits (1193), Expect = e-128
 Identities = 238/280 (85%), Positives = 254/280 (90%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMI+EVPTIAIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMISEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLRAKCI+DQTLDVTSKDLYSSDHTVVPV              RGIIIVKLRR
Sbjct: 100  EFCSVEFHLRAKCISDQTLDVTSKDLYSSDHTVVPVDFTDNAGYDSTEP-RGIIIVKLRR 158

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE++ME+LTL+EK  FVESSPTK
Sbjct: 159  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTK 218

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P+T QV V D EAYTYDDEV+KKAEAMGKPGLVEI+AKEDSFIFTVE+TG IKAS
Sbjct: 219  VFDIDPNTQQVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKAS 278

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIEILKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 279  QLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Gossypium raimondii] gi|763810754|gb|KJB77656.1|
            hypothetical protein B456_012G149200 [Gossypium
            raimondii]
          Length = 318

 Score =  462 bits (1190), Expect = e-127
 Identities = 235/280 (83%), Positives = 254/280 (90%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGL+PL S+RAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLRAKCI+DQTLDVTSKDLYSSDHTVVPV              RGIIIVKLRR
Sbjct: 100  EFCSVEFHLRAKCISDQTLDVTSKDLYSSDHTVVPVDFTDSAGYESSEQ-RGIIIVKLRR 158

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE+MM+TLTL+EKQ FV+SSPT+
Sbjct: 159  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTR 218

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P+T QV V D EAYTYDDEV+KKAEAMGKPGLVEI+AKEDSFIFT+E+TG +KA 
Sbjct: 219  VFDIDPNTQQVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKAF 278

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIEILKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 279  QLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_012065701.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            isoform X1 [Jatropha curcas] gi|643741758|gb|KDP47129.1|
            hypothetical protein JCGZ_22125 [Jatropha curcas]
          Length = 317

 Score =  461 bits (1186), Expect = e-127
 Identities = 236/280 (84%), Positives = 251/280 (89%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            EYCSVEFHLRAKCI DQTLDVTSKDLYSSDHTV+PV              RGIIIVKLRR
Sbjct: 100  EYCSVEFHLRAKCITDQTLDVTSKDLYSSDHTVIPVDFSDSGYESNEQ--RGIIIVKLRR 157

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEP+I+INE++METLTL+EKQ +VESSPTK
Sbjct: 158  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKQSWVESSPTK 217

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P T QV V D E YTYDDEVIKKAEAMGKPGLV+I AKED+FIFTVE+TG IKAS
Sbjct: 218  VFTIDPVTQQVKVEDHELYTYDDEVIKKAEAMGKPGLVDIRAKEDTFIFTVESTGAIKAS 277

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIE+LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 278  QLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 317


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Cicer arietinum]
          Length = 319

 Score =  460 bits (1184), Expect = e-127
 Identities = 234/280 (83%), Positives = 253/280 (90%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMI+EVPTIAIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAMAMRFSRDCDACDGDGQC
Sbjct: 40   VMISEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            EYCSVEFHLR KCI DQTLDVTSKDLYSSDHTVVPV            D RGIIIVKLRR
Sbjct: 100  EYCSVEFHLRVKCITDQTLDVTSKDLYSSDHTVVPVDFSADPSSLESSDGRGIIIVKLRR 159

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEP+I+INE++ME+LTL+EK+++V+SSPT+
Sbjct: 160  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHINEDLMESLTLEEKREWVDSSPTR 219

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P T QV V D EAY+YDDEVIKKAEAMGKPGLVEI AK+DSFIFTVE+TG +KAS
Sbjct: 220  VFDIDPVTQQVMVVDPEAYSYDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKAS 279

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIEILKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 280  QLLLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 319


>ref|XP_009785778.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Nicotiana sylvestris]
          Length = 318

 Score =  459 bits (1180), Expect = e-126
 Identities = 231/280 (82%), Positives = 251/280 (89%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFI+HRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTIAIDLVEIEVNSSVLNDEFISHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            EYCSVEF+LR KC++DQTLDVTSKDL SSDHTVVPV              +GIIIVKLRR
Sbjct: 100  EYCSVEFYLRVKCLSDQTLDVTSKDLLSSDHTVVPVDYSDASSGFDNSTNKGIIIVKLRR 159

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGI KDHAKWSPAATVTFMYEP+IYINE+MMETLTL+EK++ V+SSPTK
Sbjct: 160  GQELRLRAIARKGIAKDHAKWSPAATVTFMYEPDIYINEDMMETLTLEEKRELVDSSPTK 219

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VFGI+P   +V V DAEAYTYDDEV+KK EAMGKPGL+EIHAKEDSFIFTVETTG +KAS
Sbjct: 220  VFGIDPE-NKVIVVDAEAYTYDDEVLKKCEAMGKPGLIEIHAKEDSFIFTVETTGAVKAS 278

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIE+LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 279  QLVLNAIEVLKQKLDAVRLSDDTVEADDQFGELGAHMRGG 318


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  458 bits (1178), Expect = e-126
 Identities = 234/280 (83%), Positives = 252/280 (90%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPT+AIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            +YCSVEFHLRAKCI DQTLDVTSKDLYSSDHTVVPV              RGIIIVKLRR
Sbjct: 100  DYCSVEFHLRAKCITDQTLDVTSKDLYSSDHTVVPVDFSDSSGYDSSEQ-RGIIIVKLRR 158

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEP+I+INE++ME+L+L+EKQ +VESSPTK
Sbjct: 159  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTK 218

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P+T QV V D EAYTYD+EVIKKAE+MGKPGLV I AKEDSFIFTVE+TG IKAS
Sbjct: 219  VFDIDPNTQQVVVVDPEAYTYDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKAS 278

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIEILKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 279  QLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_009605052.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Nicotiana tomentosiformis]
          Length = 318

 Score =  456 bits (1174), Expect = e-125
 Identities = 230/280 (82%), Positives = 249/280 (88%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFI+HRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTIAIDLVEIEVNSSVLNDEFISHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            EYCSVEF+LR KC++DQTLDVTSKDL SSDHTVVPV              +GIIIVKLRR
Sbjct: 100  EYCSVEFYLRVKCLSDQTLDVTSKDLLSSDHTVVPVDYSDASSGFDNSTNKGIIIVKLRR 159

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGI KDHAKWSPAATVTFMYEP+IYINE+MMETLTL EK++ V+SSPTK
Sbjct: 160  GQELRLRAIARKGIAKDHAKWSPAATVTFMYEPDIYINEDMMETLTLNEKRELVDSSPTK 219

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VFGI+P   +V V D EAYTYDDEV+KK EAMGKPGL+EIHAKEDSFIFTVETTG +KAS
Sbjct: 220  VFGIDPE-NKVIVVDPEAYTYDDEVLKKCEAMGKPGLIEIHAKEDSFIFTVETTGAVKAS 278

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIE+LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 279  QLVLNAIEVLKQKLDAVRLSDDTVEADDQFGELGAHMRGG 318


>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Glycine max] gi|734335936|gb|KHN08054.1| DNA-directed
            RNA polymerase II subunit RPB3-A [Glycine soja]
            gi|947039641|gb|KRG89365.1| hypothetical protein
            GLYMA_20G019200 [Glycine max]
          Length = 320

 Score =  455 bits (1171), Expect = e-125
 Identities = 230/280 (82%), Positives = 252/280 (90%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPT+AIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 41   VMIAEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 100

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLR KC+ DQTLDVTSKDLYSSD TV PV            + RGIIIVKLRR
Sbjct: 101  EFCSVEFHLRVKCMTDQTLDVTSKDLYSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRR 160

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE++METLTL+EK+++V+SSPT+
Sbjct: 161  GQELKLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTR 220

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P T QV V DAEAYTYDDEV+KKAEAMGKPGLVEI A++DSFIFTVE+TG +KAS
Sbjct: 221  VFEIDPVTQQVMVVDAEAYTYDDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKAS 280

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIEILKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 281  QLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 320


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Vitis
            vinifera] gi|731383801|ref|XP_010647901.1| PREDICTED:
            DNA-directed RNA polymerases II, IV and V subunit 3
            [Vitis vinifera]
          Length = 318

 Score =  454 bits (1169), Expect = e-125
 Identities = 232/280 (82%), Positives = 252/280 (90%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPT+AIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAMAMRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLRAKC+ D+TLDVTSKDL SSDHTVVPV              +GIIIVKLRR
Sbjct: 100  EFCSVEFHLRAKCMTDETLDVTSKDLISSDHTVVPVDFSDSSGYDSADK-KGIIIVKLRR 158

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE++ME+LTL+EK  +VESSPTK
Sbjct: 159  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTK 218

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+ S+ QV V DAEAYTYDDEV+KKAEAMGKPGLVEI+AKEDSFIFTVE+TG IKAS
Sbjct: 219  VFDIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKAS 278

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAI++LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 279  QLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Eucalyptus grandis] gi|629097957|gb|KCW63722.1|
            hypothetical protein EUGRSUZ_G01370 [Eucalyptus grandis]
          Length = 321

 Score =  453 bits (1166), Expect = e-124
 Identities = 232/280 (82%), Positives = 252/280 (90%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPL S+RAM+MRFSRDCDACDGDGQC
Sbjct: 43   VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLTSDRAMSMRFSRDCDACDGDGQC 102

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLRAKC+ DQTLDVTSKDL SSDHTVVPV              +GI IVKLRR
Sbjct: 103  EFCSVEFHLRAKCMTDQTLDVTSKDLISSDHTVVPVDFSDALADDSAEQ-KGITIVKLRR 161

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE+++ETL+L+EKQ +VESSPTK
Sbjct: 162  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLVETLSLEEKQSWVESSPTK 221

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P+T QV V D EAYTYD+EVIKKAEAMGKPGLVEI+AKEDSFIFTVE+TG IKAS
Sbjct: 222  VFDIDPNTEQVLVVDPEAYTYDEEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKAS 281

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAI++LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 282  QLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 321


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  453 bits (1166), Expect = e-124
 Identities = 231/280 (82%), Positives = 252/280 (90%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPT+AIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLRAKC+ D+TLDVTSKDL SSDHTVVPV              +GIIIVKLRR
Sbjct: 100  EFCSVEFHLRAKCMTDETLDVTSKDLISSDHTVVPVDFSDSSGYDSADK-KGIIIVKLRR 158

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE++ME+LTL+EK  +VESSPTK
Sbjct: 159  GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTK 218

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+ S+ QV V DAEAYTYDDEV+KKAEAMGKPGLVEI+AKEDSFIFTVE+TG IKAS
Sbjct: 219  VFDIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKAS 278

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAI++LKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 279  QLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Glycine max] gi|734425272|gb|KHN42991.1| DNA-directed
            RNA polymerase II subunit RPB3-A [Glycine soja]
            gi|947101920|gb|KRH50412.1| hypothetical protein
            GLYMA_07G220900 [Glycine max]
          Length = 319

 Score =  451 bits (1160), Expect = e-124
 Identities = 230/280 (82%), Positives = 251/280 (89%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPT+AIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM+MRFSRDCDACDGDGQC
Sbjct: 41   VMIAEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC 100

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXDTRGIIIVKLRR 770
            E+CSVEFHLR KC+ DQTLDVTSKDLYSSD TV PV              RGIIIVKLRR
Sbjct: 101  EFCSVEFHLRVKCMTDQTLDVTSKDLYSSDPTVSPVDFSDPSATDSDN-NRGIIIVKLRR 159

Query: 769  GQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVESSPTK 590
            GQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE++METLTL+EK+++V+SSPT+
Sbjct: 160  GQELKLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTR 219

Query: 589  VFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKAS 410
            VF I+P T QV V DAEAYTYDDEV+KKAEAMGKPGLVEI A++DSFIFTVE+TG +KAS
Sbjct: 220  VFEIDPVTQQVMVVDAEAYTYDDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKAS 279

Query: 409  QLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            QL LNAIEILKQKLDAVRLS DTVEAD+QFGELGAHMRGG
Sbjct: 280  QLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 319


>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
            [Populus trichocarpa] gi|550331423|gb|EEE87820.2|
            DNA-directed RNA polymerase II 36 kDa polypeptide B
            family protein [Populus trichocarpa]
          Length = 323

 Score =  450 bits (1157), Expect = e-123
 Identities = 233/284 (82%), Positives = 247/284 (86%), Gaps = 4/284 (1%)
 Frame = -1

Query: 1129 VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLVPLISERAMAMRFSRDCDACDGDGQC 950
            VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGL+PL SERAM MRFSRDCDACDGDGQC
Sbjct: 40   VMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQC 99

Query: 949  EYCSVEFHLRAKCINDQTLDVTSKDLYSSDHTVVPVXXXXXXXXXXXXD----TRGIIIV 782
            EYCSVEFHLRAKCI DQTLDVTSKDLYSSDH V+PV            D     RGIIIV
Sbjct: 100  EYCSVEFHLRAKCITDQTLDVTSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIV 159

Query: 781  KLRRGQELVLRAIARKGIGKDHAKWSPAATVTFMYEPEIYINEEMMETLTLKEKQDFVES 602
            KLRRGQEL LRAIARKGIGKDHAKWSPAATVTFMYEPEI+INE++METLTL+EK  ++ES
Sbjct: 160  KLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIES 219

Query: 601  SPTKVFGINPSTGQVYVHDAEAYTYDDEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGG 422
            SPTKVF I+  T QV V D EAYTYDDEVIKKAEAMGK GL++I AKEDSFIFTVE+TG 
Sbjct: 220  SPTKVFDIDKVTQQVVVVDPEAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGA 279

Query: 421  IKASQLFLNAIEILKQKLDAVRLSSDTVEADEQFGELGAHMRGG 290
            +KASQL LNAIEILKQKLDAVRLS DTVEAD+QFGELG HMRGG
Sbjct: 280  VKASQLVLNAIEILKQKLDAVRLSDDTVEADDQFGELGVHMRGG 323