BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00008882
         (375 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097502.1| PREDICTED: DNA-directed RNA polymerases II a...   200   3e-49
ref|XP_009775519.1| PREDICTED: DNA-directed RNA polymerases II a...   200   3e-49
ref|XP_009758424.1| PREDICTED: DNA-directed RNA polymerases II a...   200   3e-49
ref|XP_009605258.1| PREDICTED: DNA-directed RNA polymerases II a...   200   3e-49
ref|XP_009606888.1| PREDICTED: DNA-directed RNA polymerases II a...   200   3e-49
emb|CDP10286.1| unnamed protein product [Coffea canephora]            200   4e-49
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II a...   199   9e-49
ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II a...   198   1e-48
emb|CBI28035.3| unnamed protein product [Vitis vinifera]              197   2e-48
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II a...   197   2e-48
ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III ...   196   4e-48
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a...   196   7e-48
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [...   196   7e-48
ref|XP_008232385.1| PREDICTED: DNA-directed RNA polymerases II a...   195   1e-47
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a...   195   1e-47
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a...   194   2e-47
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun...   194   2e-47
ref|XP_013688168.1| PREDICTED: DNA-directed RNA polymerases II a...   194   2e-47
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ...   194   2e-47
ref|XP_010690512.1| PREDICTED: DNA-directed RNA polymerases II a...   194   2e-47

>ref|XP_011097502.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Sesamum indicum] gi|747046072|ref|XP_011097515.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Sesamum indicum]
          Length = 206

 Score =  200 bits (509), Expect = 3e-49
 Identities = 95/107 (88%), Positives = 106/107 (99%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC++EISTKFHLEVFQEAELLVNIK+HVLVP+HQ+LTPEEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCISEISTKFHLEVFQEAELLVNIKEHVLVPQHQVLTPEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRY+TYRYVV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_009775519.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Nicotiana sylvestris] gi|698573867|ref|XP_009775520.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like [Nicotiana sylvestris]
          Length = 206

 Score =  200 bits (509), Expect = 3e-49
 Identities = 97/107 (90%), Positives = 105/107 (98%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC++EISTKFHLEVFQEAELLVNIK+HVLVPEHQ LTPEEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCISEISTKFHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRYITYRYVV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_009758424.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           isoform X1 [Nicotiana sylvestris]
           gi|698523238|ref|XP_009758425.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Nicotiana sylvestris]
          Length = 206

 Score =  200 bits (509), Expect = 3e-49
 Identities = 97/107 (90%), Positives = 105/107 (98%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC++EISTKFHLEVFQEAELLVNIK+HVLVPEHQ LTPEEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCISEISTKFHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRYITYRYVV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_009605258.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Nicotiana tomentosiformis]
           gi|697192348|ref|XP_009605259.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like [Nicotiana
           tomentosiformis]
          Length = 206

 Score =  200 bits (509), Expect = 3e-49
 Identities = 97/107 (90%), Positives = 105/107 (98%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC++EISTKFHLEVFQEAELLVNIK+HVLVPEHQ LTPEEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCISEISTKFHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRYITYRYVV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_009606888.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           isoform X1 [Nicotiana tomentosiformis]
           gi|697106108|ref|XP_009606889.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Nicotiana tomentosiformis]
           gi|697106110|ref|XP_009606890.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Nicotiana tomentosiformis]
           gi|697106112|ref|XP_009606891.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Nicotiana tomentosiformis]
          Length = 206

 Score =  200 bits (509), Expect = 3e-49
 Identities = 97/107 (90%), Positives = 105/107 (98%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC++EISTKFHLEVFQEAELLVNIK+HVLVPEHQ LTPEEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCISEISTKFHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRYITYRYVV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206


>emb|CDP10286.1| unnamed protein product [Coffea canephora]
          Length = 206

 Score =  200 bits (508), Expect = 4e-49
 Identities = 95/107 (88%), Positives = 106/107 (99%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC++EISTKFHLEVFQEAELLVNIK+HVLVPEHQ+LTPEEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCISEISTKFHLEVFQEAELLVNIKNHVLVPEHQLLTPEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRY+TYR+VV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206


>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Solanum lycopersicum]
          Length = 206

 Score =  199 bits (505), Expect = 9e-49
 Identities = 93/107 (86%), Positives = 106/107 (99%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           L+VQQNLTPFA+TC++EISTKFHLEVFQEAE+LVNIK+HVL+PEHQ+L+PEEKKTLLERY
Sbjct: 100 LIVQQNLTPFARTCISEISTKFHLEVFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRYITYRYVV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Erythranthe guttatus] gi|848881798|ref|XP_012841244.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Erythranthe guttatus]
           gi|604328677|gb|EYU34199.1| hypothetical protein
           MIMGU_mgv1a013932mg [Erythranthe guttata]
          Length = 206

 Score =  198 bits (503), Expect = 1e-48
 Identities = 92/107 (85%), Positives = 105/107 (98%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           L+VQQNLTPFA+TC++EISTKFHLEVFQEAE+L+NIK+HVLVPEHQ+LTPEEKKTLLERY
Sbjct: 100 LIVQQNLTPFARTCISEISTKFHLEVFQEAEMLINIKEHVLVPEHQVLTPEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRG VVKI RPSETAGRY+TYRYVV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGHVVKIIRPSETAGRYVTYRYVV 206


>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  197 bits (502), Expect = 2e-48
 Identities = 96/107 (89%), Positives = 104/107 (97%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC+ EISTKFHLEVFQEAELLVNIK+HVLVPEHQ+LT EEKKTLLERY
Sbjct: 80  LVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERY 139

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ+SDPIA+Y+G+KRGQVVKI RPSETAGRYITYRYVV
Sbjct: 140 TVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSETAGRYITYRYVV 186


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
           vinifera] gi|225445172|ref|XP_002284110.1| PREDICTED:
           DNA-directed RNA polymerases II and IV subunit 5A [Vitis
           vinifera]
          Length = 206

 Score =  197 bits (502), Expect = 2e-48
 Identities = 96/107 (89%), Positives = 104/107 (97%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC+ EISTKFHLEVFQEAELLVNIK+HVLVPEHQ+LT EEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ+SDPIA+Y+G+KRGQVVKI RPSETAGRYITYRYVV
Sbjct: 160 TVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis] gi|587928674|gb|EXC15864.1| DNA-directed RNA
           polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  196 bits (499), Expect = 4e-48
 Identities = 95/106 (89%), Positives = 104/106 (98%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC++EISTKFHLEVFQEAELLVNIK+HVLVPEHQ+LT EEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCISEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYV 57
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRYITYRYV
Sbjct: 160 TVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYITYRYV 205


>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Populus euphratica]
          Length = 206

 Score =  196 bits (497), Expect = 7e-48
 Identities = 93/107 (86%), Positives = 104/107 (97%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC+ EISTKFHLEVFQEAELLVNIK+HVLVPEHQ+L+ EEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRY+TYRYV+
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 206


>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 206

 Score =  196 bits (497), Expect = 7e-48
 Identities = 93/107 (86%), Positives = 104/107 (97%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC+ EISTKFHLEVFQEAELLVNIK+HVLVPEHQ+L+ EEKKTLLERY
Sbjct: 100 LVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRY+TYRYV+
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 206


>ref|XP_008232385.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Prunus mume]
          Length = 206

 Score =  195 bits (495), Expect = 1e-47
 Identities = 94/107 (87%), Positives = 103/107 (96%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LV QQNLTPFAKTC++EIS+KFHLEVFQEAELLVNIK+HVLVPEH +LT EEKKTLLERY
Sbjct: 100 LVTQQNLTPFAKTCISEISSKFHLEVFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIAKYYG+KRGQVVKI RPSETAGRYITYRYV+
Sbjct: 160 TVKETQLPRIQVTDPIAKYYGLKRGQVVKIVRPSETAGRYITYRYVI 206


>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  195 bits (495), Expect = 1e-47
 Identities = 91/107 (85%), Positives = 104/107 (97%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           L+VQQNLTPFA+TC++EIS KFHLEVFQEAE+LVNIK+HVL+P+HQ LTPEEKKTLLERY
Sbjct: 100 LIVQQNLTPFARTCISEISIKFHLEVFQEAEMLVNIKNHVLIPKHQTLTPEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRY+TYRYVV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  194 bits (494), Expect = 2e-47
 Identities = 91/107 (85%), Positives = 105/107 (98%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           L+VQQNLTPFA+TC++EISTKFHLEVFQEAE+LVNIK+HVL+PEH +L+PEEKK+LLERY
Sbjct: 100 LIVQQNLTPFARTCISEISTKFHLEVFQEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+YYG+KRGQVVKI RPSETAGRYITYRYVV
Sbjct: 160 TVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
           gi|462414880|gb|EMJ19617.1| hypothetical protein
           PRUPE_ppa011542mg [Prunus persica]
          Length = 206

 Score =  194 bits (494), Expect = 2e-47
 Identities = 94/107 (87%), Positives = 103/107 (96%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LV QQNLTPFAKTC++EIS+KFHLEVFQEAELLVNIK+HVLVPEH +LT EEKKTLLERY
Sbjct: 100 LVTQQNLTPFAKTCISEISSKFHLEVFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIAKYYG+KRGQVVKI RPSETAGRYITYRYV+
Sbjct: 160 TVKETQLPRIQVTDPIAKYYGLKRGQVVKIIRPSETAGRYITYRYVI 206


>ref|XP_013688168.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Brassica napus]
          Length = 124

 Score =  194 bits (493), Expect = 2e-47
 Identities = 92/107 (85%), Positives = 105/107 (98%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC++EIS+KFHLEVFQEAE+LVNIK+HVLVPEHQ+LT EEKKTLLERY
Sbjct: 18  LVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERY 77

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+Y+G+KRGQVVKI RPSETAGRY+TYRYVV
Sbjct: 78  TVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 124


>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
           gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
           Full=DNA-directed RNA polymerases II and IV subunit 5A;
           Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
           II subunit E; AltName: Full=RNA polymerase I, II and III
           24.3 kDa subunit; Short=AtRPB24.3
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           NRPB5 [Arabidopsis thaliana]
          Length = 205

 Score =  194 bits (493), Expect = 2e-47
 Identities = 92/107 (85%), Positives = 105/107 (98%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFA+TC++EIS+KFHLEVFQEAE+LVNIK+HVLVPEHQ+LT EEKKTLLERY
Sbjct: 99  LVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERY 158

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DPIA+Y+G+KRGQVVKI RPSETAGRY+TYRYVV
Sbjct: 159 TVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 205


>ref|XP_010690512.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Beta
           vulgaris subsp. vulgaris] gi|870849253|gb|KMT01516.1|
           hypothetical protein BVRB_9g215190 [Beta vulgaris subsp.
           vulgaris]
          Length = 206

 Score =  194 bits (493), Expect = 2e-47
 Identities = 91/107 (85%), Positives = 104/107 (97%)
 Frame = -2

Query: 374 LVVQQNLTPFAKTCVTEISTKFHLEVFQEAELLVNIKDHVLVPEHQMLTPEEKKTLLERY 195
           LVVQQNLTPFAKTC++EIS+KFHLEVFQEAE+LVNIK+HVLVPEHQ+L  EEKKTLL+RY
Sbjct: 100 LVVQQNLTPFAKTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQLLNDEEKKTLLQRY 159

Query: 194 TVKETQLPRIQLSDPIAKYYGMKRGQVVKITRPSETAGRYITYRYVV 54
           TVKETQLPRIQ++DP+A+YYG+KRGQVVKI RPSETAGRY+TYRYVV
Sbjct: 160 TVKETQLPRIQMNDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206