BLASTX nr result
ID: Perilla23_contig00005493
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00005493
(326 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009002277.1| ribosomal protein S18 (chloroplast) [Pinguic... 59 1e-12
ref|YP_007507133.1| ribosomal protein S18 (chloroplast) [Salvia ... 71 3e-10
gb|AFV61835.1| ribosomal protein S18 (chloroplast) [Origanum vul... 69 1e-09
ref|YP_009162283.1| ribosomal protein S18 (chloroplast) [Scutell... 69 1e-09
ref|YP_007353937.1| ribosomal protein S18 (chloroplast) [Tectona... 69 1e-09
gb|AKZ24374.1| ribosomal protein S18 (plastid) [Veronica americana] 68 3e-09
gb|ADD30002.1| ribosomal protein S18 (chloroplast) [Aucuba japon... 67 4e-09
ref|YP_817504.1| ribosomal protein S18 [Coffea arabica] gi|12215... 67 4e-09
ref|YP_003359381.1| ribosomal protein S18 (chloroplast) [Olea eu... 67 4e-09
gb|ADD30018.1| ribosomal protein S18 (chloroplast) [Gunnera mani... 67 5e-09
gb|ADD30003.1| ribosomal protein S18 (chloroplast) [Dillenia ind... 67 5e-09
ref|YP_009108611.1| ribosomal protein S18 [Echites umbellatus] g... 67 7e-09
gb|ADD30013.1| ribosomal protein S18 (chloroplast) [Berberidopsi... 67 7e-09
ref|YP_007889883.1| ribosomal protein S18 [Francoa sonchifolia] ... 67 7e-09
ref|YP_913209.1| ribosomal protein S18 [Gossypium barbadense] gi... 67 7e-09
gb|KJB06341.1| hypothetical protein B456_001G063400 [Gossypium r... 66 9e-09
gb|ADD30019.1| ribosomal protein S18 (chloroplast) [Heuchera san... 66 1e-08
ref|YP_009171621.1| ribosomal protein S18 (chloroplast) [Elaeagn... 65 1e-08
gb|AKZ24382.1| ribosomal protein S18 (plastid) [Cicuta maculata] 65 1e-08
ref|YP_009108398.1| ribosomal protein S18 (chloroplast) [Orobanc... 65 1e-08
>ref|YP_009002277.1| ribosomal protein S18 (chloroplast) [Pinguicula ehlersiae]
gi|575882159|emb|CDL78833.1| ribosomal protein S18
(chloroplast) [Pinguicula ehlersiae]
Length = 134
Score = 58.5 bits (140), Expect(2) = 1e-12
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFE+ E T RTTGL T NK
Sbjct: 67 KQARILSLLPFLNNEKQFEKTEPTARTTGLITGNK 101
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 25/34 (73%), Positives = 28/34 (82%), Gaps = 2/34 (5%)
Frame = -1
Query: 227 EINRLFY-SLQLEFQSELKRGLV-FYLTNLRIQI 132
+INRL SL+ EFQSELKRGLV F+LTN RIQI
Sbjct: 101 KINRLIICSLESEFQSELKRGLVFFFLTNPRIQI 134
>ref|YP_007507133.1| ribosomal protein S18 (chloroplast) [Salvia miltiorrhiza]
gi|836643424|ref|YP_009144536.1| ribosomal protein S18
(chloroplast) [Rosmarinus officinalis]
gi|401879764|gb|AFQ30951.1| ribosomal protein S18
(chloroplast) [Salvia miltiorrhiza]
gi|573461973|emb|CCQ71642.1| ribosomal protein S18
(chloroplast) [Salvia miltiorrhiza]
gi|827345184|gb|AKJ76768.1| ribosomal protein S18
(chloroplast) [Rosmarinus officinalis]
gi|827346544|gb|AKJ77730.1| ribosomal protein S18
(chloroplast) [Perilla frutescens]
gi|916444233|gb|AKZ24369.1| ribosomal protein S18
(plastid) [Nepeta cataria] gi|916444236|gb|AKZ24370.1|
ribosomal protein S18 (plastid) [Salvia nemorosa]
Length = 101
Score = 71.2 bits (173), Expect = 3e-10
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 101
>gb|AFV61835.1| ribosomal protein S18 (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 101
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFERIEST RTTGLRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERIESTARTTGLRTRNK 101
>ref|YP_009162283.1| ribosomal protein S18 (chloroplast) [Scutellaria baicalensis]
gi|827345882|gb|AKJ77183.1| ribosomal protein S18
(chloroplast) [Scutellaria baicalensis]
gi|949600174|gb|ALN11625.1| ribosomal protein S18
(chloroplast) [Scutellaria insignis]
Length = 101
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQ ERIESTTRTTGLRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQLERIESTTRTTGLRTRNK 101
>ref|YP_007353937.1| ribosomal protein S18 (chloroplast) [Tectona grandis]
gi|438687626|emb|CCP47152.1| ribosomal protein S18
(chloroplast) [Tectona grandis]
gi|438688310|emb|CCP47241.1| ribosomal protein S18
(chloroplast) [Tectona grandis]
gi|438688434|emb|CCP47330.1| ribosomal protein S18
(chloroplast) [Tectona grandis]
gi|916444230|gb|AKZ24368.1| ribosomal protein S18
(plastid) [Monarda fistulosa var. mollis]
Length = 101
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFERIESTTRTTGLRTR K
Sbjct: 67 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRKK 101
>gb|AKZ24374.1| ribosomal protein S18 (plastid) [Veronica americana]
Length = 101
Score = 67.8 bits (164), Expect = 3e-09
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER EST+RTTGLRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERTESTSRTTGLRTRNK 101
>gb|ADD30002.1| ribosomal protein S18 (chloroplast) [Aucuba japonica]
Length = 101
Score = 67.4 bits (163), Expect = 4e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER EST RTTGLRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERAESTARTTGLRTRNK 101
>ref|YP_817504.1| ribosomal protein S18 [Coffea arabica]
gi|122153642|sp|A0A357.1|RR18_COFAR RecName: Full=30S
ribosomal protein S18, chloroplastic
gi|116242186|gb|ABJ89701.1| ribosomal protein S18
[Coffea arabica]
Length = 101
Score = 67.4 bits (163), Expect = 4e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER EST RTTGLRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERTESTARTTGLRTRNK 101
>ref|YP_003359381.1| ribosomal protein S18 (chloroplast) [Olea europaea]
gi|330850765|ref|YP_004376443.1| ribosomal protein S18
[Olea europaea subsp. europaea]
gi|334700304|ref|YP_004563803.1| ribosomal protein S18
[Olea europaea subsp. cuspidata]
gi|334701641|ref|YP_004564026.1| ribosomal protein S18
[Olea woodiana subsp. woodiana]
gi|334701910|ref|YP_004564519.1| ribosomal protein S18
[Olea europaea subsp. maroccana]
gi|359422283|ref|YP_004935688.1| ribosomal protein S18
(chloroplast) [Sesamum indicum]
gi|731971853|ref|YP_009110624.1| ribosomal protein S18
(chloroplast) [Hesperelaea palmeri]
gi|110456626|gb|ABG74753.1| ribosomal protein S18
[Forsythia europaea] gi|110456697|gb|ABG74806.1|
ribosomal protein S18 [Jasminum abyssinicum]
gi|281428709|gb|ADA69948.1| ribosomal protein S18
(chloroplast) [Olea europaea]
gi|290487234|gb|ADD30001.1| ribosomal protein S18
(chloroplast) [Antirrhinum majus]
gi|291059275|gb|ADD72111.1| ribosomal protein S18
(chloroplast) [Olea europaea]
gi|328795455|emb|CBR30337.1| ribosomal protein S18 [Olea
europaea subsp. europaea] gi|334084423|emb|CBR23852.1|
ribosomal protein S18 [Olea europaea subsp. cuspidata]
gi|334084509|emb|CBR24645.1| ribosomal protein S18 [Olea
europaea subsp. europaea] gi|334084595|emb|CBR30428.1|
ribosomal protein S18 [Olea europaea subsp. europaea]
gi|334084681|emb|CBS29374.1| ribosomal protein S18 [Olea
woodiana subsp. woodiana] gi|334084886|emb|CBS29264.1|
ribosomal protein S18 [Olea europaea subsp. maroccana]
gi|334084972|emb|CBJ04320.1| ribosomal protein S18 [Olea
europaea subsp. cuspidata] gi|334085058|emb|CBR23761.1|
ribosomal protein S18 [Olea europaea subsp. cuspidata]
gi|347448317|gb|AEO92728.1| ribosomal protein S18
(chloroplast) [Sesamum indicum]
gi|496538623|gb|AGL45358.1| ribosomal protein S18
(chloroplast) [Sesamum indicum]
gi|510934426|emb|CCQ09124.1| ribosomal protein S18
(chloroplast) [Olea europaea subsp. europaea]
gi|725798308|emb|CED79784.1| ribosomal protein S18
(chloroplast) [Hesperelaea palmeri]
gi|916444238|gb|AKZ24371.1| ribosomal protein S18
(plastid) [Penstemon angustifolius]
gi|916444241|gb|AKZ24372.1| ribosomal protein S18
(plastid) [Penstemon gracilis]
Length = 101
Score = 67.4 bits (163), Expect = 4e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER EST RTTGLRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERTESTARTTGLRTRNK 101
>gb|ADD30018.1| ribosomal protein S18 (chloroplast) [Gunnera manicata]
Length = 101
Score = 67.0 bits (162), Expect = 5e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILS LPFLNNEKQFERIEST RTTGLRTRNK
Sbjct: 67 KQARILSSLPFLNNEKQFERIESTARTTGLRTRNK 101
>gb|ADD30003.1| ribosomal protein S18 (chloroplast) [Dillenia indica]
Length = 101
Score = 67.0 bits (162), Expect = 5e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILS LPFLNNEKQFER ESTTRTTGLRTRNK
Sbjct: 67 KQARILSSLPFLNNEKQFERTESTTRTTGLRTRNK 101
>ref|YP_009108611.1| ribosomal protein S18 [Echites umbellatus]
gi|702075402|gb|AIW05287.1| ribosomal protein S18
[Echites umbellatus]
Length = 101
Score = 66.6 bits (161), Expect = 7e-09
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRN 223
KQARILSLLPFLNNEKQFER ESTTRTTGLRTRN
Sbjct: 67 KQARILSLLPFLNNEKQFERKESTTRTTGLRTRN 100
>gb|ADD30013.1| ribosomal protein S18 (chloroplast) [Berberidopsis corallina]
Length = 101
Score = 66.6 bits (161), Expect = 7e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILS LPFLNNEKQFERIEST RTTGLRTRNK
Sbjct: 67 KQARILSSLPFLNNEKQFERIESTPRTTGLRTRNK 101
>ref|YP_007889883.1| ribosomal protein S18 [Francoa sonchifolia]
gi|386268387|gb|AFJ00493.1| ribosomal protein S18
[Francoa sonchifolia]
Length = 101
Score = 66.6 bits (161), Expect = 7e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER ES TRTTGLRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERSESPTRTTGLRTRNK 101
>ref|YP_913209.1| ribosomal protein S18 [Gossypium barbadense]
gi|125987695|sp|A0ZZ57.1|RR18_GOSBA RecName: Full=30S
ribosomal protein S18, chloroplastic
gi|119224883|dbj|BAF41269.1| Ribosomal protein S18
[Gossypium barbadense]
Length = 101
Score = 66.6 bits (161), Expect = 7e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER ESTTRTT LRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERSESTTRTTALRTRNK 101
>gb|KJB06341.1| hypothetical protein B456_001G063400 [Gossypium raimondii]
Length = 69
Score = 66.2 bits (160), Expect = 9e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER ESTTRTT LRTRNK
Sbjct: 35 KQARILSLLPFLNNEKQFERNESTTRTTALRTRNK 69
>gb|ADD30019.1| ribosomal protein S18 (chloroplast) [Heuchera sanguinea]
gi|924443860|gb|ALB78390.1| ribosomal protein S18
(chloroplast) [Heuchera parviflora var. saurensis]
Length = 101
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER EST RTTG RTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERTESTARTTGFRTRNK 101
>ref|YP_009171621.1| ribosomal protein S18 (chloroplast) [Elaeagnus macrophylla]
gi|814936667|gb|AKE36518.1| ribosomal protein S18
(chloroplast) [Elaeagnus macrophylla]
Length = 101
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER ESTTRTTGLRT+ K
Sbjct: 67 KQARILSLLPFLNNEKQFERSESTTRTTGLRTKKK 101
>gb|AKZ24382.1| ribosomal protein S18 (plastid) [Cicuta maculata]
Length = 101
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER ESTTRT GLR RNK
Sbjct: 67 KQARILSLLPFLNNEKQFERTESTTRTAGLRARNK 101
>ref|YP_009108398.1| ribosomal protein S18 (chloroplast) [Orobanche californica]
gi|702068480|emb|CDH98508.1| ribosomal protein S18
(chloroplast) [Orobanche californica]
Length = 101
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -3
Query: 324 KQARILSLLPFLNNEKQFERIESTTRTTGLRTRNK 220
KQARILSLLPFLNNEKQFER EST R TGLRTRNK
Sbjct: 67 KQARILSLLPFLNNEKQFERTESTVRATGLRTRNK 101